Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 35 - 82 | 2.8e-09 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 167, 224 |
| AclWI | GGATC | 1 cut(s) | 361 |
| AfaI | GTAC | 3 cut(s) | 28, 144, 247 |
| AflIII | ACRYGT | 1 cut(s) | 15 |
| AgsI | TTSAA | 2 cut(s) | 181, 296 |
| AlwI | GGATC | 1 cut(s) | 361 |
| ApeKI | GCWGC | 2 cut(s) | 342, 392 |
| AseI | ATTAAT | 1 cut(s) | 132 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 279 |
| BbvI | GCAGC | 2 cut(s) | 354, 404 |
| BccI | CCATC | 1 cut(s) | 83 |
| BceAI | ACGGC | 1 cut(s) | 237 |
| BfaI | CTAG | 1 cut(s) | 75 |
| BisI | GCNGC | 2 cut(s) | 343, 393 |
| BlsI | GCNGC | 2 cut(s) | 344, 394 |
| BmsI | GCATC | 1 cut(s) | 379 |
| BseGI | GGATG | 1 cut(s) | 112 |
| BseMII | CTCAG | 1 cut(s) | 263 |
| BseRI | GAGGAG | 1 cut(s) | 224 |
| BseXI | GCAGC | 2 cut(s) | 354, 404 |
| Bsp1407I | TGTACA | 2 cut(s) | 26, 142 |
| Bsp143I | GATC | 1 cut(s) | 353 |
| BspACI | CCGC | 2 cut(s) | 167, 224 |
| BspCNI | CTCAG | 1 cut(s) | 262 |
| BspPI | GGATC | 1 cut(s) | 361 |
| BsrGI | TGTACA | 2 cut(s) | 26, 142 |
| BssMI | GATC | 1 cut(s) | 353 |
| Bst6I | CTCTTC | 1 cut(s) | 291 |
| BstAUI | TGTACA | 2 cut(s) | 26, 142 |
| BstDEI | CTNAG | 2 cut(s) | 102, 249 |
| BstF5I | GGATG | 1 cut(s) | 112 |
| BstKTI | GATC | 1 cut(s) | 356 |
| BstMBI | GATC | 1 cut(s) | 353 |
| BstV1I | GCAGC | 2 cut(s) | 354, 404 |
| BstX2I | RGATCY | 1 cut(s) | 353 |
| BstYI | RGATCY | 1 cut(s) | 353 |
| BtsCI | GGATG | 1 cut(s) | 112 |
| Csp6I | GTAC | 3 cut(s) | 27, 143, 246 |
| CviAII | CATG | 1 cut(s) | 127 |
| CviJI | RGCY | 5 cut(s) | 74, 124, 173, 243, 395 |
| CviKI_1 | RGCY | 5 cut(s) | 74, 124, 173, 243, 395 |
| CviQI | GTAC | 3 cut(s) | 27, 143, 246 |
| DdeI | CTNAG | 2 cut(s) | 102, 249 |
| DpnI | GATC | 1 cut(s) | 355 |
| DpnII | GATC | 1 cut(s) | 353 |
| Eam1104I | CTCTTC | 1 cut(s) | 291 |
| EarI | CTCTTC | 1 cut(s) | 291 |
| FaeI | CATG | 1 cut(s) | 130 |
| FaiI | YATR | 7 cut(s) | 35, 128, 141, 239, 320, 330, 347 |
| FatI | CATG | 1 cut(s) | 126 |
| Fnu4HI | GCNGC | 2 cut(s) | 343, 393 |
| FokI | GGATG | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 2 cut(s) | 343, 393 |
| FspBI | CTAG | 1 cut(s) | 75 |
| GluI | GCNGC | 2 cut(s) | 343, 393 |
| Hin1II | CATG | 1 cut(s) | 130 |
| HinfI | GANTC | 2 cut(s) | 94, 280 |
| Hpy188III | TCNNGA | 1 cut(s) | 118 |
| HpyCH4IV | ACGT | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 3 cut(s) | 190, 332, 392 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 249 |
| HpySE526I | ACGT | 1 cut(s) | 15 |
| Hsp92II | CATG | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 353 |
| LmnI | GCTCC | 1 cut(s) | 257 |
| LpnPI | CCDG | 2 cut(s) | 18, 103 |
| Lsp1109I | GCAGC | 2 cut(s) | 354, 404 |
| LweI | GCATC | 1 cut(s) | 379 |
| MaeI | CTAG | 1 cut(s) | 75 |
| MaeII | ACGT | 1 cut(s) | 15 |
| MalI | GATC | 1 cut(s) | 355 |
| MboI | GATC | 1 cut(s) | 353 |
| MboII | GAAGA | 1 cut(s) | 308 |
| MflI | RGATCY | 1 cut(s) | 353 |
| MluCI | AATT | 4 cut(s) | 52, 215, 306, 312 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MmeI | TCCRAC | 1 cut(s) | 122 |
| MnlI | CCTC | 4 cut(s) | 64, 157, 245, 406 |
| MroXI | GAANNNNTTC | 1 cut(s) | 279 |
| MseI | TTAA | 7 cut(s) | 132, 159, 204, 263, 309, 369, 406 |
| NdeII | GATC | 1 cut(s) | 353 |
| NlaIII | CATG | 1 cut(s) | 130 |
| PdmI | GAANNNNTTC | 1 cut(s) | 279 |
| PfeI | GAWTC | 1 cut(s) | 280 |
| PkrI | GCNGC | 2 cut(s) | 344, 394 |
| PleI | GAGTC | 1 cut(s) | 102 |
| PpsI | GAGTC | 1 cut(s) | 102 |
| PshBI | ATTAAT | 1 cut(s) | 132 |
| PsuI | RGATCY | 1 cut(s) | 353 |
| RsaI | GTAC | 3 cut(s) | 28, 144, 247 |
| RsaNI | GTAC | 3 cut(s) | 27, 143, 246 |
| SaqAI | TTAA | 7 cut(s) | 132, 159, 204, 263, 309, 369, 406 |
| SatI | GCNGC | 2 cut(s) | 343, 393 |
| Sau3AI | GATC | 1 cut(s) | 353 |
| SchI | GAGTC | 1 cut(s) | 103 |
| SetI | ASST | 2 cut(s) | 18, 84 |
| SfaNI | GCATC | 1 cut(s) | 379 |
| Sse9I | AATT | 4 cut(s) | 52, 215, 306, 312 |
| SsiI | CCGC | 2 cut(s) | 167, 224 |
| SspMI | CTAG | 1 cut(s) | 75 |
| TaiI | ACGT | 1 cut(s) | 18 |
| TasI | AATT | 4 cut(s) | 52, 215, 306, 312 |
| TatI | WGTACW | 3 cut(s) | 26, 142, 245 |
| TfiI | GAWTC | 1 cut(s) | 280 |
| Tru1I | TTAA | 7 cut(s) | 132, 159, 204, 263, 309, 369, 406 |
| Tru9I | TTAA | 7 cut(s) | 132, 159, 204, 263, 309, 369, 406 |
| TseI | GCWGC | 2 cut(s) | 342, 392 |
| TspGWI | ACGGA | 1 cut(s) | 366 |
| VspI | ATTAAT | 1 cut(s) | 132 |
| XmnI | GAANNNNTTC | 1 cut(s) | 279 |
| XspI | CTAG | 1 cut(s) | 75 |