No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12830 |
| fragaria_vesca | FvH4_6g54150 |
| malus_domestica | MD09G1004900.v1.1 MD17G1008900.v1.1 |
| prunus_persica | Prupe.3G311900_v2.0.a1 Prupe.3G311900_v2.0.a1 |
| pyrus_communis | pycom111g00360 pycom17g00380 |
| rosa_chinensis | RchiOBHm_Chr2g0176321 |
| rosa_laevigata | RLG00000022403 RLG00000029963 |
| rosa_multiflora | Rmu_co8090046.1_g000001 Rmu_sc0001118.1_g000005 Rmu_sc0002535.1_g000017 Rmu_sc0012068.1_g000005 Rmu_sc0019886.1_g000002 Rmu_sc0027060.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00076570 Rroxscaffold_7G00183620 |
| rosa_rugosa | Rorug02G0593200 |
| rosa_samantha | Rh1CG085100 Rh2AG671700 Rh2BG683200 Rh2CG645800 Rh2DG696700 Rh6AG282600 Rh6CG285300 Rh6DG278400 |
| rosa_wichuraiana | Rw2G055080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 10 |
| AciI | CCGC | 1 cut(s) | 242 |
| AclWI | GGATC | 2 cut(s) | 111, 227 |
| AcsI | RAATTY | 1 cut(s) | 200 |
| AgsI | TTSAA | 2 cut(s) | 229, 296 |
| AlwI | GGATC | 2 cut(s) | 111, 227 |
| ApoI | RAATTY | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 1 cut(s) | 92 |
| AsuII | TTCGAA | 1 cut(s) | 204 |
| BbsI | GAAGAC | 4 cut(s) | 24, 69, 213, 289 |
| BceAI | ACGGC | 1 cut(s) | 226 |
| BpiI | GAAGAC | 4 cut(s) | 24, 69, 213, 289 |
| Bpu14I | TTCGAA | 1 cut(s) | 204 |
| Bsa29I | ATCGAT | 1 cut(s) | 249 |
| BsaJI | CCNNGG | 1 cut(s) | 96 |
| BseCI | ATCGAT | 1 cut(s) | 249 |
| BseDI | CCNNGG | 1 cut(s) | 96 |
| BseGI | GGATG | 1 cut(s) | 92 |
| BseRI | GAGGAG | 2 cut(s) | 38, 50 |
| Bsh1236I | CGCG | 1 cut(s) | 10 |
| BshVI | ATCGAT | 1 cut(s) | 249 |
| Bsp119I | TTCGAA | 1 cut(s) | 204 |
| Bsp143I | GATC | 3 cut(s) | 103, 232, 246 |
| Bsp68I | TCGCGA | 1 cut(s) | 10 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspDI | ATCGAT | 1 cut(s) | 249 |
| BspFNI | CGCG | 1 cut(s) | 10 |
| BspPI | GGATC | 2 cut(s) | 111, 227 |
| BspT104I | TTCGAA | 1 cut(s) | 204 |
| BssECI | CCNNGG | 1 cut(s) | 96 |
| BssMI | GATC | 3 cut(s) | 103, 232, 246 |
| Bst4CI | ACNGT | 1 cut(s) | 191 |
| BstBI | TTCGAA | 1 cut(s) | 204 |
| BstDSI | CCRYGG | 1 cut(s) | 96 |
| BstF5I | GGATG | 1 cut(s) | 92 |
| BstFNI | CGCG | 1 cut(s) | 10 |
| BstKTI | GATC | 3 cut(s) | 106, 235, 249 |
| BstMBI | GATC | 3 cut(s) | 103, 232, 246 |
| BstUI | CGCG | 1 cut(s) | 10 |
| BstV2I | GAAGAC | 4 cut(s) | 24, 69, 213, 289 |
| Bsu15I | ATCGAT | 1 cut(s) | 249 |
| BsuTUI | ATCGAT | 1 cut(s) | 249 |
| BtgI | CCRYGG | 1 cut(s) | 96 |
| BtsCI | GGATG | 1 cut(s) | 92 |
| BtuMI | TCGCGA | 1 cut(s) | 10 |
| ClaI | ATCGAT | 1 cut(s) | 249 |
| DpnI | GATC | 3 cut(s) | 105, 234, 248 |
| DpnII | GATC | 3 cut(s) | 103, 232, 246 |
| EcoRI | GAATTC | 1 cut(s) | 200 |
| FaiI | YATR | 1 cut(s) | 125 |
| FokI | GGATG | 1 cut(s) | 79 |
| HinfI | GANTC | 3 cut(s) | 89, 277, 312 |
| HphI | GGTGA | 1 cut(s) | 92 |
| Hpy166II | GTNNAC | 1 cut(s) | 307 |
| Hpy188III | TCNNGA | 1 cut(s) | 9 |
| Hpy8I | GTNNAC | 1 cut(s) | 307 |
| Hpy99I | CGWCG | 2 cut(s) | 188, 191 |
| HpyAV | CCTTC | 3 cut(s) | 71, 109, 279 |
| HpyCH4III | ACNGT | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| Kzo9I | GATC | 3 cut(s) | 103, 232, 246 |
| MalI | GATC | 3 cut(s) | 105, 234, 248 |
| MboI | GATC | 3 cut(s) | 103, 232, 246 |
| MluCI | AATT | 2 cut(s) | 83, 200 |
| MlyI | GAGTC | 1 cut(s) | 271 |
| MnlI | CCTC | 5 cut(s) | 16, 19, 28, 31, 169 |
| MseI | TTAA | 1 cut(s) | 319 |
| MvnI | CGCG | 1 cut(s) | 10 |
| NdeII | GATC | 3 cut(s) | 103, 232, 246 |
| NruI | TCGCGA | 1 cut(s) | 10 |
| NspV | TTCGAA | 1 cut(s) | 204 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 195, 210, 216 |
| PfeI | GAWTC | 2 cut(s) | 89, 312 |
| PleI | GAGTC | 1 cut(s) | 271 |
| PpsI | GAGTC | 1 cut(s) | 271 |
| RruI | TCGCGA | 1 cut(s) | 10 |
| SaqAI | TTAA | 1 cut(s) | 319 |
| Sau3AI | GATC | 3 cut(s) | 103, 232, 246 |
| SchI | GAGTC | 1 cut(s) | 271 |
| SetI | ASST | 2 cut(s) | 82, 301 |
| SfuI | TTCGAA | 1 cut(s) | 204 |
| SgeI | CNNG | 8 cut(s) | 21, 34, 109, 121, 184, 286, 291, 302 |
| Sse9I | AATT | 2 cut(s) | 83, 200 |
| SsiI | CCGC | 1 cut(s) | 242 |
| TaaI | ACNGT | 1 cut(s) | 191 |
| TaqI | TCGA | 3 cut(s) | 204, 249, 280 |
| TasI | AATT | 2 cut(s) | 83, 200 |
| TfiI | GAWTC | 2 cut(s) | 89, 312 |
| Tru1I | TTAA | 1 cut(s) | 319 |
| Tru9I | TTAA | 1 cut(s) | 319 |
| TspDTI | ATGAA | 2 cut(s) | 66, 177 |
| TspGWI | ACGGA | 1 cut(s) | 85 |
| XapI | RAATTY | 1 cut(s) | 200 |