Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005075

Physical Location & Seq

Genomic Coordinates Forward (+)

24629945 .. 24631473

Gene Structure 1529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0179400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGAAGGAACCTAGAGAGTCGGTCTTCATCCCAGCCCCAGGTATTGGCCACCTCGTATCAACCGTCGAGATTGCAAAGCTCCTCGTCACTCGAGATGACCAAATTTTCATCACAATTCTCATAATGAAGTTTCCCTTTGACGACTCCAATCCCCAAGGTACTCAAGAAGACGACTACTCATCAATCTCACCGCGCATCAAGTTCATCAGCCTCCCAGAGCTGGACATAGACACACAAGGAATGGGACCTGGCGCCTTCTTCAAAATATTTGTCGAAAATCAGAAACCGAACGTTACAGACGTGGTCACCAAACTCACCGAGTCTCGGTCCGAGTCCAAGCCTCGACTCGCCGGGTTTGTCATTGACATGTTCTGCACCACCATGATCGACGTGGCCAATGAATTTGGGGTTCCTACTTACGTTTTCTTCACGTCCAACGCAGCGTGTCTTGGGTTCTTGCTACACCTCCAAGCCATTTGTGATGAGGAAAACAAGGATGTTTCCGAGTTCTTGGAGTCGGGGGCCGATCTGTCTCTGCCGAGTTTTATCAATCCGCTGCCTCATGGAGTTTTGACTAGTGCTCTTCTAGACAAGGAGGGCGCCAATGCATTCCTCAATCATGCAAGAAGGTTTAGAGAAACCAAGGGTATTTTGGTAAACACGTTCTTGGAGTTGGAGTCGCATGCTTTGCACTCTCTTTCCGATGGTAAAATCCCGCCGGTGTACCCGGTGGGGCCCTTACTGAACTTGAAAAATGATGACGACCAACCAAAGTCCGATATCTTGGAGTGGCTTGAGGATCAGCCTCCCTTATCTGTAGTGTTCCTGTGCTTCGGGAGCATGGGAAGTTTTGCTGAGGATCAGTTGAAAGAGATAGCGTGTGCGTTGGAGCAGAGTGGATATCGGTTCTTGTGGTCCCTACGCCAGCCCCCACCAAAGGATAAGATAGCTTTCCCAAGCAATTACGGAGATGCCAAGGCAGTCTTGCCTGATGGATTTCTTGATTGGACGGCTGGGATAGGAAAAATTATAGGTTGGGCCCCGCAAATTGATATCTTGGCCCACCCTTCGATCGGAGGGTTTGTACTCCATTGTGGATGGAACTCTACGCTTGAGAGTCTGTGGTATGGTGTACCGATTGCCACGTGGCCAATGTATGCGGAACAACAGTTGAATGCCTTTGGGCTGGTGAGGGAATTGGGATTGGCCGTGGAAGTTGACATGAACTATTGGAAAGATGGTCAAGTGGTTTTGAGTGCACAAGTCATAGAGAAGGGGATAAGGCAAGTGATGGAGCAGGATGGTGATAAAAGGAATAAGGTAAAAGAGACGAGTGAAAAGAGCAAGAAAGCTTTATCGGTTGGGTCATCATACTCTTCATTAGGTCACTTTATTGATCAGATAATTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000151 GO:0000153 GO:0000422 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0016043 GO:0016236 GO:0016740 GO:0019776 GO:0022411 GO:0022607 GO:0032991 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0044804 GO:0061726 GO:0061919 GO:0070925 GO:0071840 GO:1902494 GO:1903008 GO:1905037 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko05167 map04136 map04138 map04140 map05167

Pfam Domains

Protein Families

Autophagy_C Autophagy_N Autophagy_act_C

Protein Analysis

470

Amino Acids

52.07

Weight (kDa)

4.82

Isoelectric Point (pI)

38.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	271 - 410	1.5e-22	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005075)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61500 AT5G61500
fragaria_vesca	FvH4_7g09530 FvH4_7g09530 FvH4_7g09530 FvH4_7g09530
malus_domestica	MD02G1218100.v1.1 MD07G1099000.v1.1 MD07G1099100.v1.1
prunus_persica	Prupe.2G123000_v2.0.a1 Prupe.2G123000_v2.0.a1 Prupe.2G123000_v2.0.a1
pyrus_communis	pycom1310g00040
rosa_chinensis	RchiOBHm_Chr1g0346321 RchiOBHm_Chr4g0385331
rosa_laevigata	RLG00000028805
rosa_multiflora	Rmu_co8505273.1_g000001 Rmu_sc0003363.1_g000042 Rmu_sc0003522.1_g000055
rosa_roxburghii	Rroxscaffold_4G00308710
rosa_rugosa	Rorug01G0179200 Rorug01G0179300 Rorug01G0179400 Rorug02G0522300 Rorug04G0105900
rosa_samantha	Rh1AG198600 Rh1BG164600 Rh1CG183900 Rh1DG195300
rosa_wichuraiana	Rw1G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	251, 599
AccB7I	CCANNNNNTGG	1 cut(s)	44
AccII	CGCG	1 cut(s)	193
AciI	CCGC	5 cut(s)	191, 554, 716, 1043, 1160
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	2 cut(s)	807, 867
AcoI	YGGCCR	4 cut(s)	46, 393, 1148, 1206
AcsI	RAATTY	2 cut(s)	102, 401
AcvI	CACGTG	1 cut(s)	1146
AcyI	GRCGYC	2 cut(s)	252, 600
AfaI	GTAC	4 cut(s)	160, 725, 1086, 1134
AfiI	CCNNNNNNNGG	6 cut(s)	38, 44, 220, 324, 937, 1073
AflIII	ACRYGT	2 cut(s)	366, 660
AgsI	TTSAA	4 cut(s)	262, 751, 868, 1174
AhlI	ACTAGT	1 cut(s)	575
AjiI	CACGTC	3 cut(s)	301, 391, 432
AjnI	CCWGG	2 cut(s)	37, 247
AluBI	AGCT	4 cut(s)	79, 220, 950, 1352
AluI	AGCT	4 cut(s)	79, 220, 950, 1352
Alw21I	GWGCWC	2 cut(s)	583, 1261
Alw26I	GTCTC	3 cut(s)	327, 537, 1322
Alw44I	GTGCAC	1 cut(s)	1257
AlwI	GGATC	2 cut(s)	807, 867
Ama87I	CYCGRG	1 cut(s)	90
AoxI	GGCC	8 cut(s)	46, 393, 522, 734, 1038, 1059, 1148, 1206
ApaI	GGGCCC	2 cut(s)	738, 1042
ApaLI	GTGCAC	1 cut(s)	1257
ApeKI	GCWGC	2 cut(s)	440, 556
ApoI	RAATTY	2 cut(s)	102, 401
ArsI	GACNNNNNNTTYG	2 cut(s)	255, 287
AspLEI	GCGC	3 cut(s)	195, 254, 602
AspS9I	GGNCC	9 cut(s)	245, 327, 522, 734, 735, 915, 1038, 1039, 1060
AsuC2I	CCSGG	2 cut(s)	352, 728
AsuHPI	GGTGA	5 cut(s)	180, 298, 307, 1201, 1316
AvaI	CYCGRG	1 cut(s)	90
AvaII	GGWCC	3 cut(s)	245, 327, 915
BaeGI	GKGCMC	3 cut(s)	738, 1042, 1261
BalI	TGGCCA	3 cut(s)	48, 395, 1150
BanI	GGYRCC	2 cut(s)	251, 599
BanII	GRGCYC	2 cut(s)	738, 1042
BbrPI	CACGTG	1 cut(s)	1146
BbsI	GAAGAC	2 cut(s)	16, 174
Bbv12I	GWGCWC	2 cut(s)	583, 1261
BbvCI	CCTCAGC	1 cut(s)	855
BbvI	GCAGC	2 cut(s)	452, 543
BccI	CCATC	6 cut(s)	698, 986, 1092, 1232, 1285, 1295
BceAI	ACGGC	2 cut(s)	1026, 1193
BciT130I	CCWGG	2 cut(s)	39, 249
BclI	TGATCA	1 cut(s)	1396
BcnI	CCSGG	2 cut(s)	352, 728
BcoDI	GTCTC	3 cut(s)	327, 537, 1322
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	3 cut(s)	12, 576, 587
BfmI	CTRYAG	1 cut(s)	816
BfoI	RGCGCY	2 cut(s)	255, 603
BisI	GCNGC	2 cut(s)	441, 557
BlsI	GCNGC	2 cut(s)	442, 558
Bme1390I	CCNGG	4 cut(s)	39, 249, 352, 728
Bme18I	GGWCC	3 cut(s)	245, 327, 915
BmeT110I	CYCGRG	1 cut(s)	90
BmgBI	CACGTC	3 cut(s)	301, 391, 432
BmgT120I	GGNCC	9 cut(s)	245, 327, 522, 734, 735, 915, 1038, 1039, 1060
BmrFI	CCNGG	4 cut(s)	39, 249, 352, 728
BmsI	GCATC	2 cut(s)	204, 961
BpiI	GAAGAC	2 cut(s)	16, 174
Bpu10I	CCTNAGC	1 cut(s)	855
BpuEI	CTTGAG	3 cut(s)	147, 815, 1133
BpuMI	CCSGG	2 cut(s)	352, 728
BsaAI	YACGTR	1 cut(s)	1146
BsaHI	GRCGYC	2 cut(s)	252, 600
BsaJI	CCNNGG	5 cut(s)	37, 154, 642, 975, 1209
BsaXI	ACNNNNNCTCC	4 cut(s)	662, 692, 1068, 1098
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 44, 220, 324, 937, 1073
Bse118I	RCCGGY	1 cut(s)	718
BseBI	CCWGG	2 cut(s)	39, 249
BseDI	CCNNGG	5 cut(s)	37, 154, 642, 975, 1209
BseGI	GGATG	4 cut(s)	27, 502, 1103, 1306
BseLI	CCNNNNNNNGG	6 cut(s)	38, 44, 220, 324, 937, 1073
BseMII	CTCAG	1 cut(s)	846
BseRI	GAGGAG	1 cut(s)	71
BseSI	GKGCMC	3 cut(s)	738, 1042, 1261
BseXI	GCAGC	2 cut(s)	452, 543
BseYI	CCCAGC	2 cut(s)	31, 1013
BsgI	GTGCAG	1 cut(s)	358
Bsh1236I	CGCG	1 cut(s)	193
Bsh1285I	CGRYCG	1 cut(s)	1074
BshFI	GGCC	8 cut(s)	48, 395, 524, 736, 1040, 1061, 1150, 1208
BshNI	GGYRCC	2 cut(s)	251, 599
BsiEI	CGRYCG	1 cut(s)	1074
BsiHKAI	GWGCWC	2 cut(s)	583, 1261
BsiHKCI	CYCGRG	1 cut(s)	90
BsiSI	CCGG	3 cut(s)	351, 719, 728
BslFI	GGGAC	2 cut(s)	258, 901
BslI	CCNNNNNNNGG	6 cut(s)	38, 44, 220, 324, 937, 1073
BsmAI	GTCTC	3 cut(s)	327, 537, 1322
BsmBI	CGTCTC	1 cut(s)	1322
BsmFI	GGGAC	2 cut(s)	258, 901
BsmI	GAATGC	2 cut(s)	608, 1180
BsnI	GGCC	8 cut(s)	48, 395, 524, 736, 1040, 1061, 1150, 1208
BsoBI	CYCGRG	1 cut(s)	90
Bsp120I	GGGCCC	2 cut(s)	734, 1038
Bsp1286I	GDGCHC	4 cut(s)	583, 738, 1042, 1261
Bsp143I	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
BspACI	CCGC	5 cut(s)	191, 554, 716, 1043, 1160
BspANI	GGCC	8 cut(s)	48, 395, 524, 736, 1040, 1061, 1150, 1208
BspCNI	CTCAG	1 cut(s)	847
BspFNI	CGCG	1 cut(s)	193
BspPI	GGATC	2 cut(s)	807, 867
BspQI	GCTCTTC	1 cut(s)	588
BspT107I	GGYRCC	2 cut(s)	251, 599
BsrFI	RCCGGY	1 cut(s)	718
BssAI	RCCGGY	1 cut(s)	718
BssECI	CCNNGG	5 cut(s)	37, 154, 642, 975, 1209
BssMI	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
BssNI	GRCGYC	2 cut(s)	252, 600
BssT1I	CCWWGG	3 cut(s)	154, 642, 975
Bst2UI	CCWGG	2 cut(s)	39, 249
Bst4CI	ACNGT	2 cut(s)	64, 1170
Bst6I	CTCTTC	2 cut(s)	588, 1381
BstACI	GRCGYC	2 cut(s)	252, 600
BstAPI	GCANNNNNTGC	1 cut(s)	688
BstBAI	YACGTR	1 cut(s)	1146
BstC8I	GCNNGC	2 cut(s)	684, 926
BstDEI	CTNAG	1 cut(s)	855
BstDSI	CCRYGG	1 cut(s)	1209
BstEII	GGTNACC	1 cut(s)	304
BstF5I	GGATG	4 cut(s)	27, 502, 1103, 1306
BstFNI	CGCG	1 cut(s)	193
BstH2I	RGCGCY	2 cut(s)	255, 603
BstHHI	GCGC	3 cut(s)	195, 254, 602
BstKTI	GATC	6 cut(s)	387, 529, 802, 862, 1074, 1399
BstMAI	GTCTC	3 cut(s)	327, 537, 1322
BstMBI	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
BstMCI	CGRYCG	1 cut(s)	1074
BstMWI	GCNNNNNNNGC	2 cut(s)	688, 837
BstNI	CCWGG	2 cut(s)	39, 249
BstNSI	RCATGY	2 cut(s)	370, 686
BstPI	GGTNACC	1 cut(s)	304
BstSCI	CCNGG	4 cut(s)	37, 247, 350, 726
BstSFI	CTRYAG	1 cut(s)	816
BstSLI	GKGCMC	3 cut(s)	738, 1042, 1261
BstUI	CGCG	1 cut(s)	193
BstV1I	GCAGC	2 cut(s)	452, 543
BstV2I	GAAGAC	2 cut(s)	16, 174
BsuRI	GGCC	8 cut(s)	48, 395, 524, 736, 1040, 1061, 1150, 1208
BtgI	CCRYGG	1 cut(s)	1209
BtrI	CACGTC	3 cut(s)	301, 391, 432
BtsCI	GGATG	4 cut(s)	27, 502, 1103, 1306
Cac8I	GCNNGC	2 cut(s)	684, 926
CfoI	GCGC	3 cut(s)	195, 254, 602
Cfr10I	RCCGGY	1 cut(s)	718
Cfr13I	GGNCC	9 cut(s)	245, 327, 522, 734, 735, 915, 1038, 1039, 1060
CpoI	CGGWCCG	1 cut(s)	327
Csp6I	GTAC	4 cut(s)	159, 724, 1085, 1133
CspI	CGGWCCG	1 cut(s)	327
CviAII	CATG	7 cut(s)	367, 382, 563, 620, 683, 841, 1222
CviQI	GTAC	4 cut(s)	159, 724, 1085, 1133
DdeI	CTNAG	1 cut(s)	855
DinI	GGCGCC	2 cut(s)	253, 601
DpnI	GATC	6 cut(s)	386, 528, 801, 861, 1073, 1398
DpnII	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
EaeI	YGGCCR	4 cut(s)	46, 393, 1148, 1206
Eam1104I	CTCTTC	2 cut(s)	588, 1381
EarI	CTCTTC	2 cut(s)	588, 1381
Eco130I	CCWWGG	3 cut(s)	154, 642, 975
Eco24I	GRGCYC	2 cut(s)	738, 1042
Eco32I	GATATC	3 cut(s)	781, 902, 1054
Eco47I	GGWCC	3 cut(s)	245, 327, 915
Eco72I	CACGTG	1 cut(s)	1146
Eco88I	CYCGRG	1 cut(s)	90
Eco91I	GGTNACC	1 cut(s)	304
EcoO109I	RGGNCCY	4 cut(s)	245, 734, 735, 1039
EcoO65I	GGTNACC	1 cut(s)	304
EcoRII	CCWGG	2 cut(s)	37, 247
EcoRV	GATATC	3 cut(s)	781, 902, 1054
EcoT14I	CCWWGG	3 cut(s)	154, 642, 975
EcoT22I	ATGCAT	1 cut(s)	610
EcoT38I	GRGCYC	2 cut(s)	738, 1042
EgeI	GGCGCC	2 cut(s)	253, 601
EheI	GGCGCC	2 cut(s)	253, 601
ErhI	CCWWGG	3 cut(s)	154, 642, 975
Esp3I	CGTCTC	1 cut(s)	1322
FaeI	CATG	7 cut(s)	370, 385, 566, 623, 686, 844, 1225
FalI	AAGNNNNNCTT	4 cut(s)	119, 151, 968, 1000
FaqI	GGGAC	2 cut(s)	258, 901
FatI	CATG	7 cut(s)	366, 381, 562, 619, 682, 840, 1221
FauI	CCCGC	2 cut(s)	723, 1050
FbaI	TGATCA	1 cut(s)	1396
Fnu4HI	GCNGC	2 cut(s)	441, 557
FokI	GGATG	4 cut(s)	14, 509, 1110, 1313
FriOI	GRGCYC	2 cut(s)	738, 1042
Fsp4HI	GCNGC	2 cut(s)	441, 557
FspBI	CTAG	3 cut(s)	12, 576, 587
GlaI	GCGC	3 cut(s)	194, 253, 601
GluI	GCNGC	2 cut(s)	441, 557
GsaI	CCCAGC	2 cut(s)	35, 1017
HaeII	RGCGCY	2 cut(s)	255, 603
HaeIII	GGCC	8 cut(s)	48, 395, 524, 736, 1040, 1061, 1150, 1208
HapII	CCGG	3 cut(s)	351, 719, 728
HhaI	GCGC	3 cut(s)	195, 254, 602
Hin1I	GRCGYC	2 cut(s)	252, 600
Hin1II	CATG	7 cut(s)	370, 385, 566, 623, 686, 844, 1225
Hin6I	GCGC	3 cut(s)	193, 252, 600
HinP1I	GCGC	3 cut(s)	193, 252, 600
HincII	GTYRAC	1 cut(s)	1219
HindII	GTYRAC	1 cut(s)	1219
HindIII	AAGCTT	1 cut(s)	1350
HinfI	GANTC	8 cut(s)	17, 143, 320, 332, 345, 515, 677, 1117
HpaII	CCGG	3 cut(s)	351, 719, 728
HphI	GGTGA	5 cut(s)	180, 298, 307, 1201, 1316
Hpy166II	GTNNAC	5 cut(s)	658, 724, 1133, 1219, 1259
Hpy188I	TCNGA	7 cut(s)	282, 331, 505, 703, 778, 1076, 1401
Hpy188III	TCNNGA	6 cut(s)	67, 92, 164, 587, 835, 1001
Hpy8I	GTNNAC	5 cut(s)	658, 724, 1133, 1219, 1259
Hpy99I	CGWCG	2 cut(s)	68, 392
HpyAV	CCTTC	4 cut(s)	265, 621, 1077, 1267
HpyCH4III	ACNGT	2 cut(s)	64, 1170
HpyCH4IV	ACGT	7 cut(s)	291, 300, 390, 420, 431, 662, 1145
HpyCH4V	TGCA	6 cut(s)	74, 375, 608, 623, 691, 1259
HpyF10VI	GCNNNNNNNGC	2 cut(s)	688, 837
HpyF3I	CTNAG	1 cut(s)	855
HpySE526I	ACGT	7 cut(s)	291, 300, 390, 420, 431, 662, 1145
Hsp92I	GRCGYC	2 cut(s)	252, 600
Hsp92II	CATG	7 cut(s)	370, 385, 566, 623, 686, 844, 1225
HspAI	GCGC	3 cut(s)	193, 252, 600
KasI	GGCGCC	2 cut(s)	251, 599
Ksp22I	TGATCA	1 cut(s)	1396
Kzo9I	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
LguI	GCTCTTC	1 cut(s)	588
LmnI	GCTCC	4 cut(s)	84, 837, 889, 1294
Lsp1109I	GCAGC	2 cut(s)	452, 543
LweI	GCATC	2 cut(s)	204, 961
MaeI	CTAG	3 cut(s)	12, 576, 587
MaeII	ACGT	7 cut(s)	291, 300, 390, 420, 431, 662, 1145
MaeIII	GTNAC	4 cut(s)	85, 292, 304, 1385
MalI	GATC	6 cut(s)	386, 528, 801, 861, 1073, 1398
MboI	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
MboII	GAAGA	6 cut(s)	16, 179, 250, 418, 575, 1368
MhlI	GDGCHC	4 cut(s)	583, 738, 1042, 1261
MlsI	TGGCCA	3 cut(s)	48, 395, 1150
MluCI	AATT	8 cut(s)	102, 114, 401, 961, 1026, 1047, 1196, 1404
MluNI	TGGCCA	3 cut(s)	48, 395, 1150
Mly113I	GGCGCC	2 cut(s)	252, 600
MlyI	GAGTC	8 cut(s)	26, 137, 329, 339, 341, 524, 686, 1126
MmeI	TCCRAC	3 cut(s)	459, 654, 867
Mox20I	TGGCCA	3 cut(s)	48, 395, 1150
Mph1103I	ATGCAT	1 cut(s)	610
MscI	TGGCCA	3 cut(s)	48, 395, 1150
MseI	TTAA	1 cut(s)	1411
MslI	CAYNNNNRTG	2 cut(s)	365, 380
Msp20I	TGGCCA	3 cut(s)	48, 395, 1150
MspA1I	CMGCKG	1 cut(s)	556
MspI	CCGG	3 cut(s)	351, 719, 728
MspR9I	CCNGG	4 cut(s)	39, 249, 352, 728
Mva1269I	GAATGC	2 cut(s)	608, 1180
MvaI	CCWGG	2 cut(s)	39, 249
MvnI	CGCG	1 cut(s)	193
MwoI	GCNNNNNNNGC	2 cut(s)	688, 837
NarI	GGCGCC	2 cut(s)	252, 600
NciI	CCSGG	2 cut(s)	352, 728
NdeII	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
NlaIII	CATG	7 cut(s)	370, 385, 566, 623, 686, 844, 1225
NmeAIII	GCCGAG	1 cut(s)	564
NmuCI	GTSAC	3 cut(s)	85, 304, 1385
NsiI	ATGCAT	1 cut(s)	610
NspI	RCATGY	2 cut(s)	370, 686
PaeI	GCATGC	1 cut(s)	686
PaeR7I	CTCGAG	1 cut(s)	90
PciI	ACATGT	1 cut(s)	366
PciSI	GCTCTTC	1 cut(s)	588
PcsI	WCGNNNNNNNCGW	2 cut(s)	60, 297
PctI	GAATGC	2 cut(s)	608, 1180
PflFI	GACNNNGTC	1 cut(s)	302
PflMI	CCANNNNNTGG	1 cut(s)	44
PkrI	GCNGC	2 cut(s)	442, 558
Ple19I	CGATCG	1 cut(s)	1074
PleI	GAGTC	8 cut(s)	25, 137, 328, 339, 340, 523, 685, 1125
PluTI	GGCGCC	2 cut(s)	255, 603
PmaCI	CACGTG	1 cut(s)	1146
PmlI	CACGTG	1 cut(s)	1146
PpsI	GAGTC	8 cut(s)	25, 137, 328, 339, 340, 523, 685, 1125
Ppu21I	YACGTR	1 cut(s)	1146
PpuMI	RGGWCCY	1 cut(s)	245
PscI	ACATGT	1 cut(s)	366
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	2 cut(s)	37, 247
PspCI	CACGTG	1 cut(s)	1146
PspEI	GGTNACC	1 cut(s)	304
PspFI	CCCAGC	2 cut(s)	31, 1013
PspGI	CCWGG	2 cut(s)	37, 247
PspOMI	GGGCCC	2 cut(s)	734, 1038
PspPI	GGNCC	9 cut(s)	245, 327, 522, 734, 735, 915, 1038, 1039, 1060
PspPPI	RGGWCCY	1 cut(s)	245
PsyI	GACNNNGTC	1 cut(s)	302
PvuI	CGATCG	1 cut(s)	1074
RsaI	GTAC	4 cut(s)	160, 725, 1086, 1134
RsaNI	GTAC	4 cut(s)	159, 724, 1085, 1133
RseI	CAYNNNNRTG	2 cut(s)	365, 380
Rsr2I	CGGWCCG	1 cut(s)	327
RsrII	CGGWCCG	1 cut(s)	327
SapI	GCTCTTC	1 cut(s)	588
SaqAI	TTAA	1 cut(s)	1411
SatI	GCNGC	2 cut(s)	441, 557
Sau3AI	GATC	6 cut(s)	384, 526, 799, 859, 1071, 1396
Sau96I	GGNCC	9 cut(s)	245, 327, 522, 734, 735, 915, 1038, 1039, 1060
SchI	GAGTC	8 cut(s)	26, 137, 329, 339, 341, 524, 686, 1126
ScrFI	CCNGG	4 cut(s)	39, 249, 352, 728
SduI	GDGCHC	4 cut(s)	583, 738, 1042, 1261
SfaNI	GCATC	2 cut(s)	204, 961
SfcI	CTRYAG	1 cut(s)	816
SfoI	GGCGCC	2 cut(s)	253, 601
Sfr274I	CTCGAG	1 cut(s)	90
SgrAI	CRCCGGYG	1 cut(s)	718
SinI	GGWCC	3 cut(s)	245, 327, 915
SlaI	CTCGAG	1 cut(s)	90
SmiMI	CAYNNNNRTG	2 cut(s)	365, 380
SmlI	CTYRAG	4 cut(s)	90, 162, 794, 1112
SmoI	CTYRAG	4 cut(s)	90, 162, 794, 1112
SpeI	ACTAGT	1 cut(s)	575
SphI	GCATGC	1 cut(s)	686
Sse9I	AATT	8 cut(s)	102, 114, 401, 961, 1026, 1047, 1196, 1404
SsiI	CCGC	5 cut(s)	191, 554, 716, 1043, 1160
SspDI	GGCGCC	2 cut(s)	251, 599
SspI	AATATT	1 cut(s)	267
SspMI	CTAG	3 cut(s)	12, 576, 587
StyD4I	CCNGG	4 cut(s)	37, 247, 350, 726
StyI	CCWWGG	3 cut(s)	154, 642, 975
TaaI	ACNGT	2 cut(s)	64, 1170
TaiI	ACGT	7 cut(s)	294, 303, 393, 423, 434, 665, 1148
TaqI	TCGA	6 cut(s)	66, 91, 273, 343, 387, 1070
TaqII	GACCGA	2 cut(s)	10, 315
TasI	AATT	8 cut(s)	102, 114, 401, 961, 1026, 1047, 1196, 1404
TatI	WGTACW	1 cut(s)	1084
Tru1I	TTAA	1 cut(s)	1411
Tru9I	TTAA	1 cut(s)	1411
TseFI	GTSAC	3 cut(s)	85, 304, 1385
TseI	GCWGC	2 cut(s)	440, 556
Tsp45I	GTSAC	3 cut(s)	85, 304, 1385
TspDTI	ATGAA	8 cut(s)	16, 17, 97, 140, 193, 414, 1238, 1368
TspGWI	ACGGA	1 cut(s)	981
Tth111I	GACNNNGTC	1 cut(s)	302
Van91I	CCANNNNNTGG	1 cut(s)	44
VneI	GTGCAC	1 cut(s)	1257
VpaK11BI	GGWCC	3 cut(s)	245, 327, 915
XapI	RAATTY	2 cut(s)	102, 401
XbaI	TCTAGA	1 cut(s)	586
XceI	RCATGY	2 cut(s)	370, 686
XcmI	CCANNNNNNNNNTGG	2 cut(s)	388, 649
XhoI	CTCGAG	1 cut(s)	90
XspI	CTAG	3 cut(s)	12, 576, 587
Zsp2I	ATGCAT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.