Rorug02G0267800

39S ribosomal protein L46

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002375
Physical Location & Seq
Reverse (-)
28256140 .. 28258452
2313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0267800.1

Sequence Viewer

Length: 2313 bp
ATGGCTTTTCTTGTAGGCTGTCTTCTTGCCTTTGCAGTTATCCTGAATGCTGAAGCAAAAGCGGTGCCATCTAATATAAGCACTGACTCTTCTTTAACACCCACTTCCAACCCCTCGTGGTTGTCAAGCTCCGGTCTGTATGCCTTCGGCTTTTATGAGCAAGGAAATGGCTATGCTGTGGGGATAGTGCTTGCTGGAGTTCCTGAAAAGACTGTAGTCTGGACTGCAAACCGCGATGACCCCTTGGTCTCCAACAATGCCACCTTGCTCTTTACATCTGGCGGGCTTTCGTTGCAATCGACTCAAGGGGAAACACCTGTGACGACCACTACTCAGTCTGCTTTCTCTGCTTCAATGCTTGACTCGGGTAACTTTGTACTATACAACTCCGATCAGGAAATAGTATGGCAAAGTTTTGACTATCCAACTGATACCATTTTGCCAAAACAGCGTTTGAAAGCAGGGGCAGAGCTGTACTCTGCTAAATCCAAAACTAATAGCTCAAAAGGCATTTTCCGTCTCAGTATGCAGACTGATGGAAACCTTGTTCAGTACCCGGTAGCTACTCTGGATGCTTACTATGCATCTAACACGCCAGGAAGTGGAGACAATGTGACACTAAACTTGGATGTTGATGGCCATCTCTACTTACTCAACAACACTGGTTTCACTATACAAAATATTACGAATGGAGCTACTGATGAAGGCAAATCTTATCTTCTGAGACTTGATGTAGATGGAATTCTTCGCTTGTATTCGTATATTTTGAAGCACAATGGCAACTGGTCAGTTGAGTGGTTATCTACAAGAGATAAGTGTGACCCTTTAGGTCTATGCGGATTTAATAGTTATTGTGTCTTAATGGATATGGAAGCTGAATGCAAATGCCTTCCAGGATTTGAGCCTATCACCCCTGGGGATCAGACTTCAGGCTGTGGGAGGAATATGGTTGCAGATGTTTGTAAGTCAGAGAATGAAAACTTCACATACATAATGGAAGAACTGCCCGACACAAGATGGAATGATGTTGCATACATGACTTGGTCATCATCAGACAAAGAAGAATGCAACAAGGCCTGCTTGGAGGATTGCAACTGTGAAGCCGCACTTTTCGCAGATGGAAGCTGCAAAAAGCAGAGGCTTCCTTTGAGTCATGGAAGAAGAAGGTATGACACTTCAAACTCAGTTTTCATCAAGGTTGGTAAATCTAAACCTCCAGCTACAGATAATATCCATTCAAAGGGAAACAAGAAAGAAGGTGGAGTTGCAGTCCTTATTGTTGGGGTTTCATTTACTGCTTTTGGGTCCATTTTGTTGCTGATCTCTGTAATTATGTTTTGGAAACATAATGTTTGGGCTTATAAAAGAATGAATAAGCTCAATGGTGATGTTGAATGGAATGAGGATGTGGCTCCACAACCATATGCTTATGAACAACTAGAGAAGATGACTGATAATTTCAAGGAGGAGGTCGGTAGAGGAGCTTCTGCAATAGTTTATAAAGGGGTGATGTTGAGTAGTCAAAAGCTAGTTGCTGTGAAGAAACTAGAGAAAGTTGCAGCTGAAGGAGCAAAAGAATTCCAGACTGAGATGAAAGTTATTGGCAGAACCCATCACCGGAGTTTAGTACGTTTGCTTGGGTATTGCCATGATGGACCAAAGAAGCTTTTGGTGTATGAGTACATGAGCAATGGTTCACTTGCAGATATTCTCTTCACACCTGAGAGGAAACCTCATTGGGAAGAAAGAATGGGAATTGCTCGAAACATAGCACGAGGGTTTCTTTATCTGCATGAAGAGTGTGATACACAGATCATCCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTACATGTGCCCCAAAATCTCTGACTTTGGTTTGGCAAAGCTGCTTCAGCCAGAGCAGACCAGAACCACTACCGGCATTAGAGGGACTAAAGGGTATGTTGCGCCTGAGTGGCATAGGAAAATGCCTATAACAGTTAAAGCAGATGTTTATAGCTTTGGAATTGTGCTGTTGGAGATTGTGTGCTGTCGAAGGAATGTGGACTGGAGTGTTCCCGAGGAGGAAGCTATCTTGGATGAATTGGTCTACCATTACTTTGAGAGTGGTGAGCTCAGTAAATTGCTTGGGGATGAAGAGATAAACAGAAGGCAATTTGAAAGGGTGATTAAAGTGGGACTTTGGTGCATCCAGGATGAGCCATCGCTTCGTCCTTCAATGAAGAAGGTTCTGCTTATGTTGGAAGGGACTGTAGACATCCCAACCCCTCCGAATCCAAGTTCTTTTCTCAATACCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

770

Amino Acids

85.81

Weight (kDa)

5.46

Isoelectric Point (pI)

41.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 155 1.2e-19 D-mannose binding lectin
S_locus_glycop PF00954 232 - 302 7.8e-09 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 487 - 748 1.1e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 488 - 748 2.5e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1362, 1500
AasI GACNNNNNNGTC 1 cut(s) 245
AccB1I GGYRCC 1 cut(s) 64
AccB7I CCANNNNNTGG 1 cut(s) 602
AccI GTMKAC 2 cut(s) 2100, 2265
AccII CGCG 1 cut(s) 234
AciI CCGC 5 cut(s) 62, 232, 282, 837, 1104
AclWI GGATC 1 cut(s) 927
AcoI YGGCCR 1 cut(s) 637
AcsI RAATTY 2 cut(s) 741, 1577
AcuI CTGAAG 4 cut(s) 72, 912, 1584, 1886
AfaI GTAC 6 cut(s) 378, 476, 554, 1629, 1682, 1859
AfiI CCNNNNNNNGG 3 cut(s) 602, 1240, 1617
AflIII ACRYGT 1 cut(s) 1860
AgsI TTSAA 9 cut(s) 354, 457, 769, 1179, 1239, 1394, 1462, 2171, 2229
AjnI CCWGG 4 cut(s) 595, 892, 913, 2202
AloI GAACNNNNNNTCC 2 cut(s) 531, 563
Alw21I GWGCWC 1 cut(s) 2127
Alw26I GTCTC 4 cut(s) 253, 524, 600, 718
AlwI GGATC 1 cut(s) 927
Ama87I CYCGRG 2 cut(s) 364, 2069
AoxI GGCC 2 cut(s) 637, 1074
ApeKI GCWGC 3 cut(s) 1125, 1559, 1897
ApoI RAATTY 2 cut(s) 741, 1577
AspLEI GCGC 1 cut(s) 1960
AspS9I GGNCC 2 cut(s) 1305, 1655
AsuC2I CCSGG 1 cut(s) 557
AsuHPI GGTGA 6 cut(s) 901, 1397, 1519, 1607, 2132, 2188
AvaI CYCGRG 2 cut(s) 364, 2069
AvaII GGWCC 2 cut(s) 1305, 1655
BaeGI GKGCMC 1 cut(s) 1868
BalI TGGCCA 1 cut(s) 639
BanI GGYRCC 1 cut(s) 64
BanII GRGCYC 1 cut(s) 2127
BarI GAAGNNNNNNTAC 3 cut(s) 38, 1468, 1500
BauI CACGAG 2 cut(s) 115, 1773
BbsI GAAGAC 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 2127
BbvI GCAGC 3 cut(s) 1112, 1571, 1884
BciT130I CCWGG 4 cut(s) 597, 894, 915, 2204
BcnI CCSGG 1 cut(s) 557
BcoDI GTCTC 4 cut(s) 253, 524, 600, 718
BfaI CTAG 3 cut(s) 1439, 1529, 1547
BfmI CTRYAG 3 cut(s) 213, 1221, 2262
BglI GCCNNNNNGGC 1 cut(s) 1966
BisI GCNGC 4 cut(s) 1104, 1126, 1560, 1898
BlsI GCNGC 4 cut(s) 1105, 1127, 1561, 1899
Bme1390I CCNGG 5 cut(s) 557, 597, 894, 915, 2204
Bme18I GGWCC 2 cut(s) 1305, 1655
BmeT110I CYCGRG 2 cut(s) 364, 2069
BmgT120I GGNCC 2 cut(s) 1305, 1655
BmiI GGNNCC 3 cut(s) 66, 1306, 1413
BmrFI CCNGG 5 cut(s) 557, 597, 894, 915, 2204
BmsI GCATC 3 cut(s) 562, 593, 2208
BoxI GACNNNNGTC 1 cut(s) 215
BpiI GAAGAC 1 cut(s) 14
BplI GAGNNNNNCTC 4 cut(s) 461, 493, 1717, 1749
BpmI CTGGAG 3 cut(s) 216, 1200, 2080
BpuEI CTTGAG 1 cut(s) 288
BpuMI CCSGG 1 cut(s) 557
BsaBI GATNNNNATC 1 cut(s) 639
BsaI GGTCTC 1 cut(s) 253
BsaJI CCNNGG 4 cut(s) 243, 913, 914, 2070
BsaWI WCCGGW 2 cut(s) 131, 1617
BsaXI ACNNNNNCTCC 6 cut(s) 597, 627, 1254, 1284, 2021, 2051
Bsc4I CCNNNNNNNGG 3 cut(s) 602, 1240, 1617
Bse118I RCCGGY 1 cut(s) 1928
Bse1I ACTGG 3 cut(s) 667, 788, 2063
Bse3DI GCAATG 1 cut(s) 1696
Bse8I GATNNNNATC 1 cut(s) 639
BseBI CCWGG 4 cut(s) 597, 894, 915, 2204
BseDI CCNNGG 4 cut(s) 243, 913, 914, 2070
BseJI GATNNNNATC 1 cut(s) 639
BseLI CCNNNNNNNGG 3 cut(s) 602, 1240, 1617
BseMI GCAATG 1 cut(s) 1696
BseMII CTCAG 8 cut(s) 347, 535, 713, 1197, 1578, 1713, 1953, 2140
BseNI ACTGG 3 cut(s) 667, 788, 2063
BseRI GAGGAG 3 cut(s) 1481, 1494, 2087
BseSI GKGCMC 1 cut(s) 1868
BseXI GCAGC 3 cut(s) 1112, 1571, 1884
Bsh1236I CGCG 1 cut(s) 234
BshFI GGCC 2 cut(s) 639, 1076
BshNI GGYRCC 1 cut(s) 64
BsiHKAI GWGCWC 1 cut(s) 2127
BsiHKCI CYCGRG 2 cut(s) 364, 2069
BsiSI CCGG 4 cut(s) 132, 557, 1618, 1929
BslFI GGGAC 3 cut(s) 1954, 2202, 2272
BslI CCNNNNNNNGG 3 cut(s) 602, 1240, 1617
BsmAI GTCTC 4 cut(s) 253, 524, 600, 718
BsmBI CGTCTC 1 cut(s) 524
BsmFI GGGAC 3 cut(s) 1954, 2202, 2272
BsmI GAATGC 3 cut(s) 52, 884, 1070
BsnI GGCC 2 cut(s) 639, 1076
Bso31I GGTCTC 1 cut(s) 253
BsoBI CYCGRG 2 cut(s) 364, 2069
Bsp1286I GDGCHC 2 cut(s) 1868, 2127
Bsp143I GATC 4 cut(s) 391, 919, 1320, 1812
BspACI CCGC 5 cut(s) 62, 232, 282, 837, 1104
BspANI GGCC 2 cut(s) 639, 1076
BspCNI CTCAG 8 cut(s) 346, 534, 714, 1196, 1579, 1714, 1954, 2139
BspFNI CGCG 1 cut(s) 234
BspLI GGNNCC 3 cut(s) 66, 1306, 1413
BspPI GGATC 1 cut(s) 927
BspT107I GGYRCC 1 cut(s) 64
BspTNI GGTCTC 1 cut(s) 253
BsrDI GCAATG 1 cut(s) 1696
BsrFI RCCGGY 1 cut(s) 1928
BsrI ACTGG 3 cut(s) 667, 788, 2063
BssAI RCCGGY 1 cut(s) 1928
BssECI CCNNGG 4 cut(s) 243, 913, 914, 2070
BssMI GATC 4 cut(s) 391, 919, 1320, 1812
BssSI CACGAG 2 cut(s) 115, 1773
BssT1I CCWWGG 1 cut(s) 243
Bst2BI CACGAG 2 cut(s) 115, 1773
Bst2UI CCWGG 4 cut(s) 597, 894, 915, 2204
Bst4CI ACNGT 5 cut(s) 214, 1097, 1823, 1990, 2263
Bst6I CTCTTC 4 cut(s) 94, 1718, 1791, 2142
BstC8I GCNNGC 3 cut(s) 192, 284, 1078
BstDEI CTNAG 8 cut(s) 333, 521, 722, 1183, 1587, 1722, 1962, 2126
BstFNI CGCG 1 cut(s) 234
BstHHI GCGC 1 cut(s) 1960
BstKTI GATC 4 cut(s) 394, 922, 1323, 1815
BstMAI GTCTC 4 cut(s) 253, 524, 600, 718
BstMBI GATC 4 cut(s) 391, 919, 1320, 1812
BstMWI GCNNNNNNNGC 9 cut(s) 292, 347, 448, 507, 581, 1112, 1568, 1903, 1966
BstNI CCWGG 4 cut(s) 597, 894, 915, 2204
BstNSI RCATGY 1 cut(s) 1864
BstPAI GACNNNNGTC 1 cut(s) 215
BstSCI CCNGG 5 cut(s) 555, 595, 892, 913, 2202
BstSFI CTRYAG 3 cut(s) 213, 1221, 2262
BstSLI GKGCMC 1 cut(s) 1868
BstUI CGCG 1 cut(s) 234
BstV1I GCAGC 3 cut(s) 1112, 1571, 1884
BstV2I GAAGAC 1 cut(s) 14
BsuRI GGCC 2 cut(s) 639, 1076
BtgZI GCGATG 2 cut(s) 249, 2199
BtsIMutI CAGTG 3 cut(s) 81, 660, 1819
Cac8I GCNNGC 3 cut(s) 192, 284, 1078
CfoI GCGC 1 cut(s) 1960
Cfr10I RCCGGY 1 cut(s) 1928
Cfr13I GGNCC 2 cut(s) 1305, 1655
Csp6I GTAC 6 cut(s) 377, 475, 553, 1628, 1681, 1858
CviAII CATG 6 cut(s) 1036, 1154, 1649, 1684, 1793, 1861
CviQI GTAC 6 cut(s) 377, 475, 553, 1628, 1681, 1858
DdeI CTNAG 8 cut(s) 333, 521, 722, 1183, 1587, 1722, 1962, 2126
DpnI GATC 4 cut(s) 393, 921, 1322, 1814
DpnII GATC 4 cut(s) 391, 919, 1320, 1812
DrdI GACNNNNNNGTC 1 cut(s) 245
DseDI GACNNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 1 cut(s) 637
Eam1104I CTCTTC 4 cut(s) 94, 1718, 1791, 2142
EarI CTCTTC 4 cut(s) 94, 1718, 1791, 2142
Ecl136II GAGCTC 1 cut(s) 2125
Eco130I CCWWGG 1 cut(s) 243
Eco147I AGGCCT 1 cut(s) 1076
Eco24I GRGCYC 1 cut(s) 2127
Eco31I GGTCTC 1 cut(s) 253
Eco47I GGWCC 2 cut(s) 1305, 1655
Eco53kI GAGCTC 1 cut(s) 2125
Eco57I CTGAAG 4 cut(s) 72, 912, 1584, 1886
Eco88I CYCGRG 2 cut(s) 364, 2069
EcoICRI GAGCTC 1 cut(s) 2125
EcoRI GAATTC 2 cut(s) 741, 1577
EcoRII CCWGG 4 cut(s) 595, 892, 913, 2202
EcoT14I CCWWGG 1 cut(s) 243
EcoT22I ATGCAT 1 cut(s) 586
EcoT38I GRGCYC 1 cut(s) 2127
ErhI CCWWGG 1 cut(s) 243
Esp3I CGTCTC 1 cut(s) 524
FaeI CATG 6 cut(s) 1039, 1157, 1652, 1687, 1796, 1864
FalI AAGNNNNNCTT 6 cut(s) 1064, 1096, 1092, 1124, 2175, 2207
FaqI GGGAC 3 cut(s) 1954, 2202, 2272
FatI CATG 6 cut(s) 1035, 1153, 1648, 1683, 1792, 1860
FauI CCCGC 1 cut(s) 275
FauNDI CATATG 1 cut(s) 1423
FblI GTMKAC 2 cut(s) 2100, 2265
Fnu4HI GCNGC 4 cut(s) 1104, 1126, 1560, 1898
FriOI GRGCYC 1 cut(s) 2127
Fsp4HI GCNGC 4 cut(s) 1104, 1126, 1560, 1898
FspBI CTAG 3 cut(s) 1439, 1529, 1547
GlaI GCGC 1 cut(s) 1959
GluI GCNGC 4 cut(s) 1104, 1126, 1560, 1898
GsuI CTGGAG 3 cut(s) 216, 1200, 2080
HaeIII GGCC 2 cut(s) 639, 1076
HapII CCGG 4 cut(s) 132, 557, 1618, 1929
HhaI GCGC 1 cut(s) 1960
Hin1II CATG 6 cut(s) 1039, 1157, 1652, 1687, 1796, 1864
Hin6I GCGC 1 cut(s) 1958
HinP1I GCGC 1 cut(s) 1958
HindIII AAGCTT 1 cut(s) 1664
HinfI GANTC 5 cut(s) 86, 301, 362, 1150, 2284
HpaII CCGG 4 cut(s) 132, 557, 1618, 1929
HphI GGTGA 6 cut(s) 901, 1397, 1519, 1607, 2132, 2188
Hpy166II GTNNAC 4 cut(s) 1697, 2056, 2101, 2266
Hpy188I TCNGA 7 cut(s) 391, 723, 924, 970, 1054, 1879, 2283
Hpy188III TCNNGA 7 cut(s) 43, 203, 220, 395, 569, 1582, 2069
Hpy8I GTNNAC 4 cut(s) 1697, 2056, 2101, 2266
HpyCH4III ACNGT 5 cut(s) 214, 1097, 1823, 1990, 2263
HpyCH4IV ACGT 1 cut(s) 1630
HpyF10VI GCNNNNNNNGC 9 cut(s) 292, 347, 448, 507, 581, 1112, 1568, 1903, 1966
HpyF3I CTNAG 8 cut(s) 333, 521, 722, 1183, 1587, 1722, 1962, 2126
HpySE526I ACGT 1 cut(s) 1630
Hsp92II CATG 6 cut(s) 1039, 1157, 1652, 1687, 1796, 1864
HspAI GCGC 1 cut(s) 1958
Kzo9I GATC 4 cut(s) 391, 919, 1320, 1812
LmnI GCTCC 5 cut(s) 134, 692, 1417, 1481, 1568
Lsp1109I GCAGC 3 cut(s) 1112, 1571, 1884
LweI GCATC 3 cut(s) 562, 593, 2208
MaeI CTAG 3 cut(s) 1439, 1529, 1547
MaeII ACGT 1 cut(s) 1630
MaeIII GTNAC 5 cut(s) 319, 368, 613, 818, 1823
MalI GATC 4 cut(s) 393, 921, 1322, 1814
MboI GATC 4 cut(s) 391, 919, 1320, 1812
MhlI GDGCHC 2 cut(s) 1868, 2127
MlsI TGGCCA 1 cut(s) 639
MluCI AATT 9 cut(s) 741, 1329, 1456, 1577, 1755, 2016, 2093, 2132, 2165
MluNI TGGCCA 1 cut(s) 639
MlyI GAGTC 4 cut(s) 80, 295, 356, 1159
MmeI TCCRAC 5 cut(s) 132, 276, 449, 2007, 2232
Mox20I TGGCCA 1 cut(s) 639
Mph1103I ATGCAT 1 cut(s) 586
MscI TGGCCA 1 cut(s) 639
MseI TTAA 5 cut(s) 95, 843, 860, 1992, 2181
MslI CAYNNNNRTG 1 cut(s) 1847
Msp20I TGGCCA 1 cut(s) 639
MspA1I CMGCKG 1 cut(s) 1562
MspI CCGG 4 cut(s) 132, 557, 1618, 1929
MspR9I CCNGG 5 cut(s) 557, 597, 894, 915, 2204
Mva1269I GAATGC 3 cut(s) 52, 884, 1070
MvaI CCWGG 4 cut(s) 597, 894, 915, 2204
MvnI CGCG 1 cut(s) 234
MwoI GCNNNNNNNGC 9 cut(s) 292, 347, 448, 507, 581, 1112, 1568, 1903, 1966
NciI CCSGG 1 cut(s) 557
NdeI CATATG 1 cut(s) 1423
NdeII GATC 4 cut(s) 391, 919, 1320, 1812
NlaIII CATG 6 cut(s) 1039, 1157, 1652, 1687, 1796, 1864
NlaIV GGNNCC 3 cut(s) 66, 1306, 1413
NmuCI GTSAC 4 cut(s) 319, 613, 818, 1823
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 1 cut(s) 1864
PasI CCCWGGG 1 cut(s) 914
PceI AGGCCT 1 cut(s) 1076
PciI ACATGT 1 cut(s) 1860
PcsI WCGNNNNNNNCGW 1 cut(s) 296
PctI GAATGC 3 cut(s) 52, 884, 1070
PfeI GAWTC 1 cut(s) 2284
PflFI GACNNNGTC 1 cut(s) 1042
PflMI CCANNNNNTGG 1 cut(s) 602
PfoI TCCNGGA 2 cut(s) 892, 2202
PkrI GCNGC 4 cut(s) 1105, 1127, 1561, 1899
PleI GAGTC 4 cut(s) 80, 295, 356, 1158
PpsI GAGTC 4 cut(s) 80, 295, 356, 1158
PscI ACATGT 1 cut(s) 1860
PshAI GACNNNNGTC 1 cut(s) 215
PsiI TTATAA 2 cut(s) 1362, 1500
Psp124BI GAGCTC 1 cut(s) 2127
Psp6I CCWGG 4 cut(s) 595, 892, 913, 2202
PspGI CCWGG 4 cut(s) 595, 892, 913, 2202
PspN4I GGNNCC 3 cut(s) 66, 1306, 1413
PspPI GGNCC 2 cut(s) 1305, 1655
PsyI GACNNNGTC 1 cut(s) 1042
PvuII CAGCTG 1 cut(s) 1562
RsaI GTAC 6 cut(s) 378, 476, 554, 1629, 1682, 1859
RsaNI GTAC 6 cut(s) 377, 475, 553, 1628, 1681, 1858
RseI CAYNNNNRTG 1 cut(s) 1847
SacI GAGCTC 1 cut(s) 2127
SaqAI TTAA 5 cut(s) 95, 843, 860, 1992, 2181
SatI GCNGC 4 cut(s) 1104, 1126, 1560, 1898
Sau3AI GATC 4 cut(s) 391, 919, 1320, 1812
Sau96I GGNCC 2 cut(s) 1305, 1655
SchI GAGTC 4 cut(s) 80, 295, 356, 1159
ScrFI CCNGG 5 cut(s) 557, 597, 894, 915, 2204
SduI GDGCHC 2 cut(s) 1868, 2127
SfaNI GCATC 3 cut(s) 562, 593, 2208
SfcI CTRYAG 3 cut(s) 213, 1221, 2262
SinI GGWCC 2 cut(s) 1305, 1655
SmiMI CAYNNNNRTG 1 cut(s) 1847
SmlI CTYRAG 1 cut(s) 303
SmoI CTYRAG 1 cut(s) 303
Sse9I AATT 9 cut(s) 741, 1329, 1456, 1577, 1755, 2016, 2093, 2132, 2165
SseBI AGGCCT 1 cut(s) 1076
SsiI CCGC 5 cut(s) 62, 232, 282, 837, 1104
SspI AATATT 1 cut(s) 682
SspMI CTAG 3 cut(s) 1439, 1529, 1547
SstI GAGCTC 1 cut(s) 2127
StuI AGGCCT 1 cut(s) 1076
StyD4I CCNGG 5 cut(s) 555, 595, 892, 913, 2202
StyI CCWWGG 1 cut(s) 243
TaaI ACNGT 5 cut(s) 214, 1097, 1823, 1990, 2263
TaiI ACGT 1 cut(s) 1633
TaqI TCGA 3 cut(s) 299, 1762, 2044
TasI AATT 9 cut(s) 741, 1329, 1456, 1577, 1755, 2016, 2093, 2132, 2165
TatI WGTACW 4 cut(s) 376, 474, 1680, 1857
TauI GCSGC 1 cut(s) 1106
TfiI GAWTC 1 cut(s) 2284
Tru1I TTAA 5 cut(s) 95, 843, 860, 1992, 2181
Tru9I TTAA 5 cut(s) 95, 843, 860, 1992, 2181
TscAI CASTG 3 cut(s) 88, 667, 1826
TseFI GTSAC 4 cut(s) 319, 613, 818, 1823
TseI GCWGC 3 cut(s) 1125, 1559, 1897
Tsp45I GTSAC 4 cut(s) 319, 613, 818, 1823
TspGWI ACGGA 1 cut(s) 506
TspRI CASTG 3 cut(s) 88, 667, 1826
Tth111I GACNNNGTC 1 cut(s) 1042
Van91I CCANNNNNTGG 1 cut(s) 602
VpaK11BI GGWCC 2 cut(s) 1305, 1655
XapI RAATTY 2 cut(s) 741, 1577
XceI RCATGY 1 cut(s) 1864
XmiI GTMKAC 2 cut(s) 2100, 2265
XspI CTAG 3 cut(s) 1439, 1529, 1547
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.