Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002375

Physical Location & Seq

Genomic Coordinates Forward (+)

28380164 .. 28382868

Gene Structure 2705 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0268500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGGCTTCCACTGGCATTGCTATCCTTCTCTTCTCACTATATTCTCTATGTGAAGGAGCTCAACGAAACGGCCATTCTAGCCACATACGCCTGGGATCTTCACTATTTCCAGAAACTCACCCCAGCTCATGGCCTTCTGCCTCTGGCCAGTTCGAATTCGGCTTTTATCAGCAAGGAAGTGGCTTCGCCGTTGGAATTTGGTTGGTGGGAGTAGAACGAAACACAACTGTATGGACAGCAAACCGTGATGATCCCCCACTGCTGCCCTCACCAAATAATACAGTGCAGCTGCAGTTAGCCAATGATGGCAAGCTTGTTCTAACCAGTGACCAAGGTCATAAAAAAGTAGTCATCGCAAGTGCAACAAACGGTTCTGTTTCCTCTGCCTCCATGCTTGATTCTGGAAACTTCGTTCTTTACGACGAAAACCATAAAGTGATCTGGGAGAGTTTCAGTCTTCCTACTGATACTATCCTGGGTGGTCAGACTCTGCCGGCTGGGGGTCAATTAGTCTCCAGTTTGTCCGATGCTAACCACTCAACAGGACATTTTCTTCTCAACATGCAGACTGACGGAAACCTTGTTCTGTACCCAGCAAACTCTGAAAAGTCTCCGTTAGATGTCTACTATGCTAGAGATACTGGGGGGATCTCGAACCTTGACCTCTATCTTAACAGTACAGATGGCAGTCTGGCTCTAATCAACACCAATAGCTCGGAAGTTTACAATGTCATCGGTAGTGGTAATGATGATCTAGCCAATAACACTGTCGTATATCGGGCAACTGTTGGCATAAACGGAGTATTAAGGGTGTATTCTCATCAGATGGATCCTGAGACAGGCAAACTCCAATCACCTGTTATTATGTGGTACCAACCAATTGATCCTTGCGATGTTAAAGGCGTGTGTGGCCTTAACAGCTATTGCACACTCAATGATGGCCAACCAAACTGTCTTTGCCTTCCTGGATCAGATTACGCTGACCTCAACAGCAGGACTATGGGTTGCTTGAGAAACTATTCAGAACCGGCGTGTGCAGCTGGCGGGAAAGAGAATACCACCTTTTATGACATAGTCACCATGGAAAATATGGCCTGGGTAGATACTCCTGACATTGAAGCCACAATGACCATAGAAGAATGCAAGAGGTCTTGTCTAGAGGACTGCAATTGTGGAGCAGCTCTGTTCGAGCGGACAAAGTGTATGAAACAGAAGCCACCACTCAGATATGTGAGAAGAGATCTGCAGACAGCCAACACAGCTTTCTTCAAGCATCCTAAAACTAAAGAACCATCTCCGATGAATCCCACTACGGTTGTTATCAGAAGCAAGAAAGTCATTGTGCAAATTCTTGTTTTAACCTTGGGTTTCATCCTCTTCTCATGTGTTGCGCTTGCAATATCTGGATTTTACATTTTCAAAATTCGAGTTCTGAGGTACAAAAGGCTGACAGAGGTTAATGGGAATCTGGGGCTGGCTGATGAGGAACTCACTATGAGAGTTTTTTCATACAACGAGCTGAAAACGGCTACAAATGGTTTCAAGCAAGAATTGGGGAAGGGCTCCTTCGGAGCAGTTTACAAAGGGGCTCTAAATAGAGGGAAAAAACTCATCGCAGTAAAAAGACTAGAGAAGTTGGTGGAAGAAGGTGAGAGGGAGTTTCGAGCGGAGATGCAAGCGATTGGAAGAACTCATCACAAGAACTTAGTTCGATTGCTGGGTTACTCTGCTGAGGACTCGAAAAGGCTCCTGGTCTATGAATATATGAGCAATGGCTCCCTTGCAGATCTTCTTTTTAAGAAAGAATGGCATCCAGCTTGGGATGAAAGAGTGAGAATTGCAGTTGATGTCGCAAGAGGTCTCCTCTATCTACATGAAGAATGCAAGTCCCCTATCATTCATTGCGACATAAAGCCTCAAAACATTCTGATGGATGATTTTTGGAATGCAAAAATCGCTGATTTTGGACTTGCAAAACTGCTAATGCCGGATCAAACAAGGACCTTCACAGGGATAAGAGGGACAAGAGGGTATTTGGCACCAGAATGGCAAAAGAACACTCCAATCTCAGTGAAGGCAGATATCTACAGTTTTGGTATAGTGATTCTTGAACTTGTGTGTTGCAGGAGGAATTTGGACGTCAGTGTTAGAGCAGAGGAGATGGTTCTTTCTACTTGGGTTTATAAGTGCTTTGTCAGTAGAGAGCTGCATAAGCTTATTTTGGGTGGCGAAGAAGTGAATAAGAAGAGCTTGGAGAATATGGTTAAGGTGGGATTATGGTGTATACAAGATGAACCAGCTCTGCGTCCATCAATGAAGTCTGTAGTATTGATGTTACAAGGCATTACTGATATATCTATCCCTCCATGTCCAACCACTGCTTCTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

796

Amino Acids

88.18

Weight (kDa)

6.46

Isoelectric Point (pI)

38.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	75 - 164	2.1e-16	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	514 - 777	2.3e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	515 - 776	1.9e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14620 AT1G14620
fragaria_vesca	FvH4_7g21940
malus_domestica	MD07G1193700.v1.1 MD07G1194000.v1.1 MD10G1064600.v1.1
prunus_persica	Prupe.2G231400_v2.0.a1 Prupe.2G231400_v2.0.a1 Prupe.2G231400_v2.0.a1 Prupe.2G231400_v2.0.a1
pyrus_communis	pycom07g18280 pycom10g05050
rosa_chinensis	RchiOBHm_Chr1g0366261 RchiOBHm_Chr3g0490801 RchiOBHm_Chr3g0492131
rosa_laevigata	RLG00000022824 RLG00000027357
rosa_multiflora	Rmu_sc0003736.1_g000005 Rmu_sc0009109.1_g000001 Rmu_sc0009763.1_g000001
rosa_roxburghii	Rroxscaffold_4G00290050 Rroxscaffold_4G00290380
rosa_rugosa	Rorug01G0328300 Rorug02G0265400 Rorug02G0265500 Rorug02G0265700 Rorug02G0267200 Rorug02G0267800 Rorug02G0268500 Rorug02G0268700 Rorug02G0269900 Rorug03G0246900 Rorug03G0247500 Rorug05G0230500
rosa_samantha	Rh1AG336600 Rh1BG298100 Rh1CG313700 Rh1DG329600 Rh3CG333200 Rh3DG335300
rosa_wichuraiana	Rw1G029830 Rw3G026540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2184
AatII	GACGTC	1 cut(s)	2142
Acc65I	GGTACC	1 cut(s)	870
AccB1I	GGYRCC	2 cut(s)	870, 2038
AccB7I	CCANNNNNTGG	1 cut(s)	129
AccBSI	CCGCTC	2 cut(s)	1192, 1667
AccI	GTMKAC	2 cut(s)	624, 2284
AciI	CCGC	3 cut(s)	1044, 1192, 1667
AclWI	GGATC	8 cut(s)	103, 245, 656, 824, 837, 878, 976, 1998
AcoI	YGGCCR	3 cut(s)	70, 145, 940
AcsI	RAATTY	5 cut(s)	155, 195, 1347, 1422, 2131
AcyI	GRCGYC	1 cut(s)	2139
AfaI	GTAC	4 cut(s)	590, 679, 872, 1439
AfiI	CCNNNNNNNGG	4 cut(s)	129, 500, 839, 2010
AgsI	TTSAA	5 cut(s)	1118, 1270, 1420, 1543, 2111
AjnI	CCWGG	5 cut(s)	90, 474, 964, 1094, 1749
AjuI	GAANNNNNNNTTGG	3 cut(s)	1247, 1279, 2365
AloI	GAACNNNNNNTCC	4 cut(s)	396, 428, 567, 599
Alw21I	GWGCWC	1 cut(s)	61
Alw26I	GTCTC	4 cut(s)	517, 615, 830, 1865
AlwI	GGATC	8 cut(s)	103, 245, 656, 824, 837, 878, 976, 1998
AlwNI	CAGNNNCTG	1 cut(s)	490
AoxI	GGCC	6 cut(s)	70, 131, 145, 910, 940, 1092
ApeKI	GCWGC	6 cut(s)	262, 286, 289, 1037, 1178, 2206
ApoI	RAATTY	5 cut(s)	155, 195, 1347, 1422, 2131
Asp700I	GAANNNNTTC	1 cut(s)	1018
Asp718I	GGTACC	1 cut(s)	870
AspLEI	GCGC	1 cut(s)	1393
AspS9I	GGNCC	1 cut(s)	2001
AsuHPI	GGTGA	5 cut(s)	110, 261, 846, 1069, 1661
AsuII	TTCGAA	1 cut(s)	153
AvaII	GGWCC	1 cut(s)	2001
BalI	TGGCCA	2 cut(s)	147, 942
BamHI	GGATCC	1 cut(s)	829
BanI	GGYRCC	2 cut(s)	870, 2038
BanII	GRGCYC	3 cut(s)	61, 1565, 1591
BbsI	GAAGAC	1 cut(s)	449
Bbv12I	GWGCWC	1 cut(s)	61
BbvCI	CCTCAGC	1 cut(s)	1731
BbvI	GCAGC	6 cut(s)	249, 276, 298, 1049, 1190, 2193
BccI	CCATC	8 cut(s)	299, 677, 820, 932, 1300, 1924, 2155, 2317
BceAI	ACGGC	3 cut(s)	85, 173, 1542
BciT130I	CCWGG	5 cut(s)	92, 476, 966, 1096, 1751
BcoDI	GTCTC	4 cut(s)	517, 615, 830, 1865
BfaI	CTAG	5 cut(s)	78, 633, 755, 1157, 1628
BfmI	CTRYAG	4 cut(s)	290, 1244, 2086, 2322
BglII	AGATCT	2 cut(s)	1240, 1786
BisI	GCNGC	6 cut(s)	263, 287, 290, 1038, 1179, 2207
BlsI	GCNGC	6 cut(s)	264, 288, 291, 1039, 1180, 2208
Bme1390I	CCNGG	5 cut(s)	92, 476, 966, 1096, 1751
Bme18I	GGWCC	1 cut(s)	2001
BmgT120I	GGNCC	1 cut(s)	2001
BmiI	GGNNCC	6 cut(s)	831, 872, 1564, 1748, 1777, 2040
BmrFI	CCNGG	5 cut(s)	92, 476, 966, 1096, 1751
BmrI	ACTGGG	1 cut(s)	651
BmsI	GCATC	4 cut(s)	517, 1282, 1662, 1819
BmuI	ACTGGG	1 cut(s)	651
BoxI	GACNNNNGTC	1 cut(s)	333
BpiI	GAAGAC	1 cut(s)	449
BplI	GAGNNNNNCTC	2 cut(s)	1848, 1880
BpmI	CTGGAG	1 cut(s)	499
Bpu10I	CCTNAGC	1 cut(s)	1731
Bpu14I	TTCGAA	1 cut(s)	153
BpuEI	CTTGAG	1 cut(s)	1030
BsaHI	GRCGYC	1 cut(s)	2139
BsaI	GGTCTC	1 cut(s)	1865
BsaJI	CCNNGG	6 cut(s)	91, 331, 475, 1080, 1095, 1362
Bsc4I	CCNNNNNNNGG	4 cut(s)	129, 500, 839, 2010
Bse118I	RCCGGY	2 cut(s)	493, 1027
Bse1I	ACTGG	5 cut(s)	16, 148, 324, 516, 646
Bse3DI	GCAATG	3 cut(s)	15, 1777, 1900
BseBI	CCWGG	5 cut(s)	92, 476, 966, 1096, 1751
BseDI	CCNNGG	6 cut(s)	91, 331, 475, 1080, 1095, 1362
BseGI	GGATG	5 cut(s)	1273, 1371, 1810, 1828, 1939
BseLI	CCNNNNNNNGG	4 cut(s)	129, 500, 839, 2010
BseMI	GCAATG	3 cut(s)	15, 1777, 1900
BseMII	CTCAG	5 cut(s)	825, 1237, 1424, 1722, 2082
BseNI	ACTGG	5 cut(s)	16, 148, 324, 516, 646
BseRI	GAGGAG	2 cut(s)	1853, 2171
BseXI	GCAGC	6 cut(s)	249, 276, 298, 1049, 1190, 2193
BseYI	CCCAGC	4 cut(s)	122, 497, 592, 1717
BsgI	GTGCAG	2 cut(s)	305, 1056
BshFI	GGCC	6 cut(s)	72, 133, 147, 912, 942, 1094
BshNI	GGYRCC	2 cut(s)	870, 2038
BsiHKAI	GWGCWC	1 cut(s)	61
BsiSI	CCGG	3 cut(s)	494, 1028, 1988
BslFI	GGGAC	2 cut(s)	1873, 2035
BslI	CCNNNNNNNGG	4 cut(s)	129, 500, 839, 2010
BsmAI	GTCTC	4 cut(s)	517, 615, 830, 1865
BsmFI	GGGAC	2 cut(s)	1873, 2035
BsmI	GAATGC	3 cut(s)	1145, 1886, 1951
BsnI	GGCC	6 cut(s)	72, 133, 147, 912, 942, 1094
Bso31I	GGTCTC	1 cut(s)	1865
Bsp119I	TTCGAA	1 cut(s)	153
Bsp1286I	GDGCHC	3 cut(s)	61, 1565, 1591
Bsp19I	CCATGG	1 cut(s)	1080
BspACI	CCGC	3 cut(s)	1044, 1192, 1667
BspANI	GGCC	6 cut(s)	72, 133, 147, 912, 942, 1094
BspCNI	CTCAG	5 cut(s)	826, 1236, 1425, 1723, 2081
BspLI	GGNNCC	6 cut(s)	831, 872, 1564, 1748, 1777, 2040
BspMAI	CTGCAG	2 cut(s)	294, 1248
BspPI	GGATC	8 cut(s)	103, 245, 656, 824, 837, 878, 976, 1998
BspQI	GCTCTTC	1 cut(s)	2240
BspT104I	TTCGAA	1 cut(s)	153
BspT107I	GGYRCC	2 cut(s)	870, 2038
BspTNI	GGTCTC	1 cut(s)	1865
BsrBI	CCGCTC	2 cut(s)	1192, 1667
BsrDI	GCAATG	3 cut(s)	15, 1777, 1900
BsrFI	RCCGGY	2 cut(s)	493, 1027
BsrI	ACTGG	5 cut(s)	16, 148, 324, 516, 646
BssAI	RCCGGY	2 cut(s)	493, 1027
BssECI	CCNNGG	6 cut(s)	91, 331, 475, 1080, 1095, 1362
BssNAI	GTATAC	1 cut(s)	2285
BssNI	GRCGYC	1 cut(s)	2139
BssT1I	CCWWGG	3 cut(s)	331, 1080, 1362
Bst1107I	GTATAC	1 cut(s)	2285
Bst2UI	CCWGG	5 cut(s)	92, 476, 966, 1096, 1751
Bst6I	CTCTTC	4 cut(s)	35, 1231, 1382, 2240
BstACI	GRCGYC	1 cut(s)	2139
BstBI	TTCGAA	1 cut(s)	153
BstC8I	GCNNGC	6 cut(s)	311, 495, 1042, 1395, 1476, 1677
BstDEI	CTNAG	6 cut(s)	834, 1223, 1433, 1705, 1731, 2068
BstDSI	CCRYGG	1 cut(s)	1080
BstENI	CCTNNNNNAGG	1 cut(s)	837
BstF5I	GGATG	5 cut(s)	1273, 1371, 1810, 1828, 1939
BstHHI	GCGC	1 cut(s)	1393
BstMAI	GTCTC	4 cut(s)	517, 615, 830, 1865
BstMWI	GCNNNNNNNGC	8 cut(s)	78, 87, 909, 918, 1037, 1259, 1955, 2212
BstNI	CCWGG	5 cut(s)	92, 476, 966, 1096, 1751
BstNSI	RCATGY	1 cut(s)	565
BstPAI	GACNNNNGTC	1 cut(s)	333
BstSCI	CCNGG	5 cut(s)	90, 474, 964, 1094, 1749
BstSFI	CTRYAG	4 cut(s)	290, 1244, 2086, 2322
BstV1I	GCAGC	6 cut(s)	249, 276, 298, 1049, 1190, 2193
BstV2I	GAAGAC	1 cut(s)	449
BstX2I	RGATCY	5 cut(s)	95, 648, 829, 1240, 1786
BstYI	RGATCY	5 cut(s)	95, 648, 829, 1240, 1786
BstZ17I	GTATAC	1 cut(s)	2285
BsuRI	GGCC	6 cut(s)	72, 133, 147, 912, 942, 1094
BtgI	CCRYGG	1 cut(s)	1080
BtgZI	GCGATG	3 cut(s)	337, 906, 1597
BtsCI	GGATG	5 cut(s)	1273, 1371, 1810, 1828, 1939
BtsI	GCAGTG	2 cut(s)	257, 2376
BtsIMutI	CAGTG	8 cut(s)	9, 257, 288, 331, 765, 2076, 2149, 2376
Cac8I	GCNNGC	6 cut(s)	311, 495, 1042, 1395, 1476, 1677
CaiI	CAGNNNCTG	1 cut(s)	490
CfoI	GCGC	1 cut(s)	1393
Cfr10I	RCCGGY	2 cut(s)	493, 1027
Cfr13I	GGNCC	1 cut(s)	2001
CseI	GACGC	1 cut(s)	2294
Csp6I	GTAC	4 cut(s)	589, 678, 871, 1438
CspCI	CAANNNNNGTGG	3 cut(s)	33, 1297, 1332
CviAII	CATG	7 cut(s)	129, 391, 562, 1081, 1383, 1874, 2367
CviQI	GTAC	4 cut(s)	589, 678, 871, 1438
DdeI	CTNAG	6 cut(s)	834, 1223, 1433, 1705, 1731, 2068
EaeI	YGGCCR	3 cut(s)	70, 145, 940
Eam1104I	CTCTTC	4 cut(s)	35, 1231, 1382, 2240
EarI	CTCTTC	4 cut(s)	35, 1231, 1382, 2240
Ecl136II	GAGCTC	1 cut(s)	59
Eco130I	CCWWGG	3 cut(s)	331, 1080, 1362
Eco24I	GRGCYC	3 cut(s)	61, 1565, 1591
Eco31I	GGTCTC	1 cut(s)	1865
Eco32I	GATATC	1 cut(s)	2083
Eco47I	GGWCC	1 cut(s)	2001
Eco53kI	GAGCTC	1 cut(s)	59
EcoICRI	GAGCTC	1 cut(s)	59
EcoNI	CCTNNNNNAGG	1 cut(s)	837
EcoO109I	RGGNCCY	1 cut(s)	2001
EcoRI	GAATTC	1 cut(s)	155
EcoRII	CCWGG	5 cut(s)	90, 474, 964, 1094, 1749
EcoRV	GATATC	1 cut(s)	2083
EcoT14I	CCWWGG	3 cut(s)	331, 1080, 1362
EcoT38I	GRGCYC	3 cut(s)	61, 1565, 1591
ErhI	CCWWGG	3 cut(s)	331, 1080, 1362
FaeI	CATG	7 cut(s)	132, 394, 565, 1084, 1386, 1877, 2370
FalI	AAGNNNNNCTT	4 cut(s)	1550, 1582, 2234, 2266
FaqI	GGGAC	2 cut(s)	1873, 2035
FatI	CATG	7 cut(s)	128, 390, 561, 1080, 1382, 1873, 2366
FauI	CCCGC	1 cut(s)	1037
FblI	GTMKAC	2 cut(s)	624, 2284
Fnu4HI	GCNGC	6 cut(s)	263, 287, 290, 1038, 1179, 2207
FokI	GGATG	5 cut(s)	1260, 1358, 1797, 1835, 1946
FriOI	GRGCYC	3 cut(s)	61, 1565, 1591
Fsp4HI	GCNGC	6 cut(s)	263, 287, 290, 1038, 1179, 2207
FspBI	CTAG	5 cut(s)	78, 633, 755, 1157, 1628
GlaI	GCGC	1 cut(s)	1392
GluI	GCNGC	6 cut(s)	263, 287, 290, 1038, 1179, 2207
GsaI	CCCAGC	4 cut(s)	126, 501, 596, 1721
GsuI	CTGGAG	1 cut(s)	499
HaeIII	GGCC	6 cut(s)	72, 133, 147, 912, 942, 1094
HapII	CCGG	3 cut(s)	494, 1028, 1988
HgaI	GACGC	1 cut(s)	2294
HhaI	GCGC	1 cut(s)	1393
Hin1I	GRCGYC	1 cut(s)	2139
Hin1II	CATG	7 cut(s)	132, 394, 565, 1084, 1386, 1877, 2370
Hin6I	GCGC	1 cut(s)	1391
HinP1I	GCGC	1 cut(s)	1391
HindIII	AAGCTT	2 cut(s)	311, 2213
HinfI	GANTC	6 cut(s)	398, 487, 1303, 1465, 1736, 2104
HpaII	CCGG	3 cut(s)	494, 1028, 1988
HphI	GGTGA	5 cut(s)	110, 261, 846, 1069, 1661
Hpy166II	GTNNAC	4 cut(s)	625, 724, 1579, 2285
Hpy188III	TCNNGA	8 cut(s)	110, 402, 652, 833, 1109, 1157, 1404, 2108
Hpy8I	GTNNAC	4 cut(s)	625, 724, 1579, 2285
Hpy99I	CGWCG	1 cut(s)	425
HpyAV	CCTTC	9 cut(s)	35, 47, 144, 971, 1552, 1576, 1640, 2014, 2068
HpyCH4IV	ACGT	1 cut(s)	2139
HpyF10VI	GCNNNNNNNGC	8 cut(s)	78, 87, 909, 918, 1037, 1259, 1955, 2212
HpyF3I	CTNAG	6 cut(s)	834, 1223, 1433, 1705, 1731, 2068
HpySE526I	ACGT	1 cut(s)	2139
Hsp92I	GRCGYC	1 cut(s)	2139
Hsp92II	CATG	7 cut(s)	132, 394, 565, 1084, 1386, 1877, 2370
HspAI	GCGC	1 cut(s)	1391
KpnI	GGTACC	1 cut(s)	874
KroI	GCCGGC	1 cut(s)	493
KroNI	GCCGGC	1 cut(s)	495
LguI	GCTCTTC	1 cut(s)	2240
LmnI	GCTCC	6 cut(s)	56, 1175, 1568, 1571, 1752, 1781
Lsp1109I	GCAGC	6 cut(s)	249, 276, 298, 1049, 1190, 2193
LweI	GCATC	4 cut(s)	517, 1282, 1662, 1819
MaeI	CTAG	5 cut(s)	78, 633, 755, 1157, 1628
MaeII	ACGT	1 cut(s)	2139
MaeIII	GTNAC	4 cut(s)	326, 1075, 1721, 2334
MbiI	CCGCTC	2 cut(s)	1192, 1667
MfeI	CAATTG	2 cut(s)	879, 1168
MflI	RGATCY	5 cut(s)	95, 648, 829, 1240, 1786
MhlI	GDGCHC	3 cut(s)	61, 1565, 1591
MlsI	TGGCCA	2 cut(s)	147, 942
MluNI	TGGCCA	2 cut(s)	147, 942
MlyI	GAGTC	2 cut(s)	481, 1730
MmeI	TCCRAC	1 cut(s)	172
Mox20I	TGGCCA	2 cut(s)	147, 942
MroNI	GCCGGC	1 cut(s)	493
MroXI	GAANNNNTTC	1 cut(s)	1018
MscI	TGGCCA	2 cut(s)	147, 942
MseI	TTAA	8 cut(s)	672, 806, 897, 915, 1358, 1458, 1797, 2265
MslI	CAYNNNNRTG	2 cut(s)	1928, 2044
Msp20I	TGGCCA	2 cut(s)	147, 942
MspA1I	CMGCKG	2 cut(s)	289, 1040
MspI	CCGG	3 cut(s)	494, 1028, 1988
MspR9I	CCNGG	5 cut(s)	92, 476, 966, 1096, 1751
MunI	CAATTG	2 cut(s)	879, 1168
Mva1269I	GAATGC	3 cut(s)	1145, 1886, 1951
MvaI	CCWGG	5 cut(s)	92, 476, 966, 1096, 1751
MwoI	GCNNNNNNNGC	8 cut(s)	78, 87, 909, 918, 1037, 1259, 1955, 2212
NaeI	GCCGGC	1 cut(s)	495
NcoI	CCATGG	1 cut(s)	1080
NgoMIV	GCCGGC	1 cut(s)	493
NlaIII	CATG	7 cut(s)	132, 394, 565, 1084, 1386, 1877, 2370
NlaIV	GGNNCC	6 cut(s)	831, 872, 1564, 1748, 1777, 2040
NmuCI	GTSAC	2 cut(s)	326, 1075
NspI	RCATGY	1 cut(s)	565
NspV	TTCGAA	1 cut(s)	153
PciSI	GCTCTTC	1 cut(s)	2240
PcsI	WCGNNNNNNNCGW	1 cut(s)	417
PctI	GAATGC	3 cut(s)	1145, 1886, 1951
PdiI	GCCGGC	1 cut(s)	495
PdmI	GAANNNNTTC	1 cut(s)	1018
PfeI	GAWTC	4 cut(s)	398, 1303, 1465, 2104
PflFI	GACNNNGTC	1 cut(s)	1073
PflMI	CCANNNNNTGG	1 cut(s)	129
PfoI	TCCNGGA	1 cut(s)	964
PkrI	GCNGC	6 cut(s)	264, 288, 291, 1039, 1180, 2208
PleI	GAGTC	2 cut(s)	481, 1730
PpsI	GAGTC	2 cut(s)	481, 1730
PpuMI	RGGWCCY	1 cut(s)	2001
PshAI	GACNNNNGTC	1 cut(s)	333
PsiI	TTATAA	1 cut(s)	2184
Psp124BI	GAGCTC	1 cut(s)	61
Psp5II	RGGWCCY	1 cut(s)	2001
Psp6I	CCWGG	5 cut(s)	90, 474, 964, 1094, 1749
PspFI	CCCAGC	4 cut(s)	122, 497, 592, 1717
PspGI	CCWGG	5 cut(s)	90, 474, 964, 1094, 1749
PspN4I	GGNNCC	6 cut(s)	831, 872, 1564, 1748, 1777, 2040
PspPI	GGNCC	1 cut(s)	2001
PspPPI	RGGWCCY	1 cut(s)	2001
PstI	CTGCAG	2 cut(s)	294, 1248
PstNI	CAGNNNCTG	1 cut(s)	490
PsuI	RGATCY	5 cut(s)	95, 648, 829, 1240, 1786
PsyI	GACNNNGTC	1 cut(s)	1073
PvuII	CAGCTG	2 cut(s)	289, 1040
RsaI	GTAC	4 cut(s)	590, 679, 872, 1439
RsaNI	GTAC	4 cut(s)	589, 678, 871, 1438
RseI	CAYNNNNRTG	2 cut(s)	1928, 2044
SacI	GAGCTC	1 cut(s)	61
SapI	GCTCTTC	1 cut(s)	2240
SaqAI	TTAA	8 cut(s)	672, 806, 897, 915, 1358, 1458, 1797, 2265
SatI	GCNGC	6 cut(s)	263, 287, 290, 1038, 1179, 2207
Sau96I	GGNCC	1 cut(s)	2001
SchI	GAGTC	2 cut(s)	481, 1730
ScrFI	CCNGG	5 cut(s)	92, 476, 966, 1096, 1751
SduI	GDGCHC	3 cut(s)	61, 1565, 1591
SfaNI	GCATC	4 cut(s)	517, 1282, 1662, 1819
SfcI	CTRYAG	4 cut(s)	290, 1244, 2086, 2322
SfuI	TTCGAA	1 cut(s)	153
SinI	GGWCC	1 cut(s)	2001
SmiMI	CAYNNNNRTG	2 cut(s)	1928, 2044
SmlI	CTYRAG	1 cut(s)	1009
SmoI	CTYRAG	1 cut(s)	1009
SsiI	CCGC	3 cut(s)	1044, 1192, 1667
SspMI	CTAG	5 cut(s)	78, 633, 755, 1157, 1628
SstI	GAGCTC	1 cut(s)	61
StyD4I	CCNGG	5 cut(s)	90, 474, 964, 1094, 1749
StyI	CCWWGG	3 cut(s)	331, 1080, 1362
TaiI	ACGT	1 cut(s)	2142
TaqI	TCGA	7 cut(s)	153, 653, 1188, 1426, 1663, 1711, 1739
TatI	WGTACW	1 cut(s)	677
TfiI	GAWTC	4 cut(s)	398, 1303, 1465, 2104
Tru1I	TTAA	8 cut(s)	672, 806, 897, 915, 1358, 1458, 1797, 2265
Tru9I	TTAA	8 cut(s)	672, 806, 897, 915, 1358, 1458, 1797, 2265
TscAI	CASTG	8 cut(s)	16, 264, 288, 331, 772, 2076, 2149, 2383
TseFI	GTSAC	2 cut(s)	326, 1075
TseI	GCWGC	6 cut(s)	262, 286, 289, 1037, 1178, 2206
Tsp45I	GTSAC	2 cut(s)	326, 1075
TspGWI	ACGGA	3 cut(s)	588, 603, 813
TspRI	CASTG	8 cut(s)	16, 264, 288, 331, 772, 2076, 2149, 2383
Tth111I	GACNNNGTC	1 cut(s)	1073
Van91I	CCANNNNNTGG	1 cut(s)	129
VpaK11BI	GGWCC	1 cut(s)	2001
XagI	CCTNNNNNAGG	1 cut(s)	837
XapI	RAATTY	5 cut(s)	155, 195, 1347, 1422, 2131
XbaI	TCTAGA	1 cut(s)	1156
XceI	RCATGY	1 cut(s)	565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1087
XmiI	GTMKAC	2 cut(s)	624, 2284
XmnI	GAANNNNTTC	1 cut(s)	1018
XspI	CTAG	5 cut(s)	78, 633, 755, 1157, 1628
ZraI	GACGTC	1 cut(s)	2140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.