Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002050

Physical Location & Seq

Genomic Coordinates Reverse (-)

28402208 .. 28406735

Gene Structure 4528 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0268700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGGCATCTTCTCATGGTAATAATACTCACTCTGAAGCAGCAAAGAAGGAACAAATAATCACTGAATTCTATGCTAAAAGTCTTCACATAATTCTCGAGTCGAGGACTCCATATATGTCCTCGAGAAATTATAGTGGCGAACAAGCCTTGTCGTCGCCATCATCTTCCTCTTCGTCCTCCTCGAGTGTGAGGCCGAGGGATAAGTGGTTTAATTTAGCTCTAAGAGAATGCCCTGCTGCGCTGGAGAATCTTGATCTCTGGCGCCAGAGCAATTTTGAACCTATGGTGGTTGATGTGGTTTTGGTCCAGAGACGACTTGTTAGTGACCCGGTGGAATGTTCACCTAGAAGGGATATTGCTAGGAACTTGTCATTGAAAGAGCGGTATCCATACTGTTGGAATTATGAGCAGGAAGATTTTTGGTGTGAGGCAAAGAGTGAAAAGATTATAGAGAGATGGGTACTGCAGTATGATACTCGCAAGACTAGAGATACAAAATCAGGGAGTAGGAGGTCGAGCAATAATCCTTTACAGATGTTGTATAAGAAATCAATATTACTCTTGAGGTCTTTGTATGTTACTGTTAGGCTTTTGCCTGCTTATAAAATTTATCGTGACCTCAATTCGTCTGGCCAAATTCTTCCATTTACTCTTGCTCACCGGGTGGCCTCTTTTGCTGAGCCCTTCACATGTAGAGAAGATGCAGAAATGCAGCGGTTTGAGTTTACCCCTGTGGATACGGGTTGTGGTAGGCTTTGCCTTTCAGTGTTGTATTGTTCATCACTTTCAGATGTAAGCTCTGAACCGTCGACTCCTATGTCTCCACAAGTTATACCAGACTATGTTGGGAGCCCATTGGCAGACCCGCTTAAAAGGTTCCCATCCCTTCCTGTGACAGGATCATTATCACGTGCCACTCCATTATCGTCTTCATTCTCGAGGCGTCATAGTTGGAGTTATGACCATGGTATAGATTCACCACCTTCAGTTTCTTTCTCACCTTCGCCTACGCGTTCAGAACCTCATGCTTCAATTTCTAACCCAAGATCTCGCCATTTCCCACCCACAAGCTTACCACGTTATCCGCCTGAAACATCTCTTGATTATAAGAAGGATATAGGTTTTTACGAGTATTGTCCTTCACCTGGCTTTTCTCCCGCACTGTCCCCATCAGCCTCTCCATCATTGCCAATCTCTATTCCTGGCAATCATGTTTCAAAGAATCTGTTACGATCTGAGAGTGCACCATTCAGTGCCCCAGTGGCCAAACGTGCTAATTCCCCTGCATCATCCCAGAAGCTATATTTTCCTCCATCTCCCCCCCTTACGAGTACAAGTTCTGGTACTTTGAAGACTGATAAAGCTACAGTTGGGACATCAGTTGAAAAGTTATTCTCTTTTGGGAAAGGGGAGTCTAGACAATGTTCTGGGCTTAAGATACCATCAGGCGGCTCACCGCAGATATCCTTTTCCAGAAGCTCCACTAGGTCTTTTCCTGATGATTTTGATGATTCGGAGTATCCTTGCCCGTTTGATTATGATGATGATGTGACAGACCCCGGTAGCAGCAGACCTGAATCCTTTGACCAAAGGCATGAGCCTGGAGGATTATTTCCAATTAGAAAATCCCAAGATGCTGCTGTTGGCGCGCTTGTAAAAATGCTAAAGAAAGCCCCACCTCTTCGGCAAGAGGTCTCAGATTCAGTAAGTTTGTCACAAGGCTGCAGGCTTGAAATGTGGAGTGATAGTAAACAAGAGGCCAATCTTTCTTCTGAGAGTCGGGCACCAGTTCAGCCTGGTGATTCCTCAAGTGTTATATCTTCAGGGCTCATAACATCAAAAACTACAGCTGATGCCTTAGAAGAGCTCCAAAGTTACAGGGATATAAAAAACTCGTTACTGGCGCAAAGTAGTAAGTCTCACATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

642

Amino Acids

71.07

Weight (kDa)

8.45

Isoelectric Point (pI)

76.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATG13	PF10033	20 - 259	3.4e-41	Autophagy-related protein 13

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002050)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0315571 RchiOBHm_Chr1g0374311 RchiOBHm_Chr5g0047891 RchiOBHm_Chr5g0060791 RchiOBHm_Chr5g0066751 RchiOBHm_Chr6g0272631
rosa_laevigata	RLG00000036779
rosa_multiflora	Rmu_sc0002889.1_g000033 Rmu_sc0006392.1_g000004 Rmu_sc0009734.1_g000006
rosa_roxburghii	Rroxscaffold_1G00047650 Rroxscaffold_2G00091830 Rroxscaffold_2G00145280 Rroxscaffold_3G00274360 Rroxscaffold_4G00295550 Rroxscaffold_6G00397480 Rroxscaffold_6G00399280 Rroxscaffold_7G00157790 Rroxscaffold_7G00200250
rosa_rugosa	Rorug02G0265200 Rorug02G0265300 Rorug02G0266300 Rorug02G0267300 Rorug02G0267900 Rorug02G0268700 Rorug02G0269400 Rorug03G0246800 Rorug03G0247400 Rorug04G0431800
rosa_samantha	Rh1AG015400 Rh1AG409700 Rh2AG293200 Rh2AG451400 Rh2BG176800 Rh2BG293700 Rh2CG415700 Rh2CG514600 Rh2DG317200 Rh3AG302300 Rh3BG369200 Rh3BG376300 Rh3DG335200 Rh3DG373000 Rh5BG325100 Rh7DG147200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	603, 1107
AasI	GACNNNNNNGTC	1 cut(s)	817
AccB1I	GGYRCC	2 cut(s)	261, 1783
AccBSI	CCGCTC	1 cut(s)	382
AccI	GTMKAC	1 cut(s)	809
AccII	CGCG	2 cut(s)	1012, 1649
AciI	CCGC	7 cut(s)	382, 715, 866, 1085, 1158, 1449, 1457
AclWI	GGATC	1 cut(s)	907
AcoI	YGGCCR	2 cut(s)	631, 1263
AcsI	RAATTY	3 cut(s)	65, 606, 636
AcuI	CTGAAG	3 cut(s)	54, 969, 1806
AcvI	CACGTG	1 cut(s)	911
AcyI	GRCGYC	2 cut(s)	262, 943
AdeI	CACNNNGTG	1 cut(s)	664
AfaI	GTAC	3 cut(s)	462, 1333, 1345
AfiI	CCNNNNNNNGG	3 cut(s)	896, 1145, 1448
AflII	CTTAAG	1 cut(s)	1433
AflIII	ACRYGT	3 cut(s)	689, 1010, 1923
AgsI	TTSAA	7 cut(s)	278, 376, 1032, 1218, 1351, 1385, 1733
AjnI	CCWGG	4 cut(s)	1144, 1201, 1600, 1795
AluBI	AGCT	8 cut(s)	218, 798, 1071, 1300, 1364, 1479, 1850, 1867
AluI	AGCT	8 cut(s)	218, 798, 1071, 1300, 1364, 1479, 1850, 1867
Alw21I	GWGCWC	2 cut(s)	1246, 1869
Alw26I	GTCTC	4 cut(s)	304, 825, 1699, 1923
Alw44I	GTGCAC	1 cut(s)	1242
AlwI	GGATC	1 cut(s)	907
Ama87I	CYCGRG	4 cut(s)	95, 121, 181, 937
AoxI	GGCC	5 cut(s)	191, 631, 666, 1263, 1758
ApaLI	GTGCAC	1 cut(s)	1242
ApeKI	GCWGC	6 cut(s)	38, 236, 712, 1566, 1637, 1722
ApoI	RAATTY	3 cut(s)	65, 606, 636
AspLEI	GCGC	5 cut(s)	241, 264, 1649, 1651, 1906
AspS9I	GGNCC	1 cut(s)	304
AsuC2I	CCSGG	3 cut(s)	329, 662, 1560
AsuHPI	GGTGA	7 cut(s)	333, 650, 969, 990, 1134, 1446, 1811
AvaI	CYCGRG	4 cut(s)	95, 121, 181, 937
AvaII	GGWCC	1 cut(s)	304
BaeGI	GKGCMC	3 cut(s)	1246, 1258, 1786
BaeI	ACNNNNGTAYC	2 cut(s)	452, 485
BalI	TGGCCA	2 cut(s)	633, 1265
BanI	GGYRCC	2 cut(s)	261, 1783
BanII	GRGCYC	4 cut(s)	684, 854, 1830, 1869
BbrPI	CACGTG	1 cut(s)	911
BbsI	GAAGAC	3 cut(s)	74, 921, 1358
Bbv12I	GWGCWC	2 cut(s)	1246, 1869
BbvI	GCAGC	6 cut(s)	50, 223, 724, 1578, 1624, 1709
BccI	CCATC	7 cut(s)	166, 450, 889, 1177, 1189, 1321, 1450
BciT130I	CCWGG	4 cut(s)	1146, 1203, 1602, 1797
BciVI	GTATCC	3 cut(s)	396, 730, 1530
BcnI	CCSGG	3 cut(s)	329, 662, 1560
BcoDI	GTCTC	4 cut(s)	304, 825, 1699, 1923
BfaI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
BfmI	CTRYAG	4 cut(s)	464, 1365, 1723, 1845
BfoI	RGCGCY	1 cut(s)	265
BfrI	CTTAAG	1 cut(s)	1433
BfuI	GTATCC	3 cut(s)	396, 730, 1530
BglI	GCCNNNNNGGC	1 cut(s)	1262
BglII	AGATCT	1 cut(s)	1046
BisI	GCNGC	7 cut(s)	39, 237, 713, 1450, 1567, 1638, 1723
BlpI	GCTNAGC	1 cut(s)	678
BlsI	GCNGC	7 cut(s)	40, 238, 714, 1451, 1568, 1639, 1724
Bme1390I	CCNGG	7 cut(s)	329, 662, 1146, 1203, 1560, 1602, 1797
Bme18I	GGWCC	1 cut(s)	304
BmeT110I	CYCGRG	4 cut(s)	95, 121, 181, 937
BmgT120I	GGNCC	1 cut(s)	304
BmiI	GGNNCC	4 cut(s)	263, 851, 878, 1785
BmrFI	CCNGG	7 cut(s)	329, 662, 1146, 1203, 1560, 1602, 1797
BmrI	ACTGGG	1 cut(s)	1253
BmsI	GCATC	5 cut(s)	14, 691, 1295, 1624, 1843
BmuI	ACTGGG	1 cut(s)	1253
BpiI	GAAGAC	3 cut(s)	74, 921, 1358
BpmI	CTGGAG	2 cut(s)	263, 1623
Bpu1102I	GCTNAGC	1 cut(s)	678
BpuEI	CTTGAG	2 cut(s)	583, 1792
BpuMI	CCSGG	3 cut(s)	329, 662, 1560
BsaAI	YACGTR	1 cut(s)	911
BsaBI	GATNNNNATC	1 cut(s)	904
BsaHI	GRCGYC	2 cut(s)	262, 943
BsaI	GGTCTC	1 cut(s)	1699
BsaJI	CCNNGG	3 cut(s)	194, 964, 1558
BsaXI	ACNNNNNCTCC	2 cut(s)	1732, 1762
Bsc4I	CCNNNNNNNGG	3 cut(s)	896, 1145, 1448
Bse1I	ACTGG	3 cut(s)	1259, 1787, 1905
Bse3DI	GCAATG	1 cut(s)	1184
Bse8I	GATNNNNATC	1 cut(s)	904
BseBI	CCWGG	4 cut(s)	1146, 1203, 1602, 1797
BseDI	CCNNGG	3 cut(s)	194, 964, 1558
BseGI	GGATG	2 cut(s)	881, 1289
BseJI	GATNNNNATC	1 cut(s)	904
BseLI	CCNNNNNNNGG	3 cut(s)	896, 1145, 1448
BseMI	GCAATG	1 cut(s)	1184
BseMII	CTCAG	4 cut(s)	669, 1227, 1710, 1764
BseNI	ACTGG	3 cut(s)	1259, 1787, 1905
BsePI	GCGCGC	1 cut(s)	1647
BseRI	GAGGAG	1 cut(s)	169
BseSI	GKGCMC	3 cut(s)	1246, 1258, 1786
BseXI	GCAGC	6 cut(s)	50, 223, 724, 1578, 1624, 1709
Bsh1236I	CGCG	2 cut(s)	1012, 1649
BshFI	GGCC	5 cut(s)	193, 633, 668, 1265, 1760
BshNI	GGYRCC	2 cut(s)	261, 1783
BsiHKAI	GWGCWC	2 cut(s)	1246, 1869
BsiHKCI	CYCGRG	4 cut(s)	95, 121, 181, 937
BsiSI	CCGG	3 cut(s)	329, 661, 1560
BslFI	GGGAC	2 cut(s)	1150, 1387
BslI	CCNNNNNNNGG	3 cut(s)	896, 1145, 1448
BsmAI	GTCTC	4 cut(s)	304, 825, 1699, 1923
BsmBI	CGTCTC	1 cut(s)	304
BsmFI	GGGAC	2 cut(s)	1150, 1387
BsmI	GAATGC	1 cut(s)	233
BsnI	GGCC	5 cut(s)	193, 633, 668, 1265, 1760
Bso31I	GGTCTC	1 cut(s)	1699
BsoBI	CYCGRG	4 cut(s)	95, 121, 181, 937
Bsp1286I	GDGCHC	7 cut(s)	684, 854, 1246, 1258, 1786, 1830, 1869
Bsp143I	GATC	4 cut(s)	253, 899, 1046, 1232
Bsp1720I	GCTNAGC	1 cut(s)	678
Bsp19I	CCATGG	1 cut(s)	964
BspACI	CCGC	7 cut(s)	382, 715, 866, 1085, 1158, 1449, 1457
BspANI	GGCC	5 cut(s)	193, 633, 668, 1265, 1760
BspCNI	CTCAG	4 cut(s)	670, 1228, 1709, 1765
BspFNI	CGCG	2 cut(s)	1012, 1649
BspLI	GGNNCC	4 cut(s)	263, 851, 878, 1785
BspMAI	CTGCAG	2 cut(s)	468, 1727
BspPI	GGATC	1 cut(s)	907
BspQI	GCTCTTC	1 cut(s)	1857
BspT107I	GGYRCC	2 cut(s)	261, 1783
BspTI	CTTAAG	1 cut(s)	1433
BspTNI	GGTCTC	1 cut(s)	1699
BsrBI	CCGCTC	1 cut(s)	382
BsrDI	GCAATG	1 cut(s)	1184
BsrI	ACTGG	3 cut(s)	1259, 1787, 1905
BssECI	CCNNGG	3 cut(s)	194, 964, 1558
BssHII	GCGCGC	1 cut(s)	1647
BssMI	GATC	4 cut(s)	253, 899, 1046, 1232
BssNI	GRCGYC	2 cut(s)	262, 943
BssT1I	CCWWGG	1 cut(s)	964
Bst2UI	CCWGG	4 cut(s)	1146, 1203, 1602, 1797
Bst4CI	ACNGT	5 cut(s)	395, 583, 807, 1164, 1369
Bst6I	CTCTTC	3 cut(s)	175, 1686, 1857
BstACI	GRCGYC	2 cut(s)	262, 943
BstAFI	CTTAAG	1 cut(s)	1433
BstBAI	YACGTR	1 cut(s)	911
BstC8I	GCNNGC	3 cut(s)	597, 1649, 1727
BstDEI	CTNAG	6 cut(s)	221, 678, 1236, 1696, 1773, 1858
BstDSI	CCRYGG	1 cut(s)	964
BstENI	CCTNNNNNAGG	1 cut(s)	894
BstF5I	GGATG	2 cut(s)	881, 1289
BstFNI	CGCG	2 cut(s)	1012, 1649
BstH2I	RGCGCY	1 cut(s)	265
BstHHI	GCGC	5 cut(s)	241, 264, 1649, 1651, 1906
BstKTI	GATC	4 cut(s)	256, 902, 1049, 1235
BstMAI	GTCTC	4 cut(s)	304, 825, 1699, 1923
BstMBI	GATC	4 cut(s)	253, 899, 1046, 1232
BstMWI	GCNNNNNNNGC	4 cut(s)	674, 1262, 1271, 1646
BstNI	CCWGG	4 cut(s)	1146, 1203, 1602, 1797
BstNSI	RCATGY	2 cut(s)	693, 1927
BstSCI	CCNGG	7 cut(s)	327, 660, 1144, 1201, 1558, 1600, 1795
BstSFI	CTRYAG	4 cut(s)	464, 1365, 1723, 1845
BstSLI	GKGCMC	3 cut(s)	1246, 1258, 1786
BstUI	CGCG	2 cut(s)	1012, 1649
BstV1I	GCAGC	6 cut(s)	50, 223, 724, 1578, 1624, 1709
BstV2I	GAAGAC	3 cut(s)	74, 921, 1358
BstX2I	RGATCY	1 cut(s)	1046
BstXI	CCANNNNNNTGG	1 cut(s)	396
BstYI	RGATCY	1 cut(s)	1046
BsuI	GTATCC	3 cut(s)	396, 730, 1530
BsuRI	GGCC	5 cut(s)	193, 633, 668, 1265, 1760
BtgI	CCRYGG	1 cut(s)	964
BtsCI	GGATG	2 cut(s)	881, 1289
BtsIMutI	CAGTG	5 cut(s)	60, 771, 1160, 1258, 1266
Cac8I	GCNNGC	3 cut(s)	597, 1649, 1727
CfoI	GCGC	5 cut(s)	241, 264, 1649, 1651, 1906
Cfr13I	GGNCC	1 cut(s)	304
CseI	GACGC	1 cut(s)	932
Csp6I	GTAC	3 cut(s)	461, 1332, 1344
CviAII	CATG	7 cut(s)	14, 690, 965, 1025, 1211, 1595, 1924
CviQI	GTAC	3 cut(s)	461, 1332, 1344
DdeI	CTNAG	6 cut(s)	221, 678, 1236, 1696, 1773, 1858
DinI	GGCGCC	1 cut(s)	263
DpnI	GATC	4 cut(s)	255, 901, 1048, 1234
DpnII	GATC	4 cut(s)	253, 899, 1046, 1232
DraIII	CACNNNGTG	1 cut(s)	664
DrdI	GACNNNNNNGTC	1 cut(s)	817
DseDI	GACNNNNNNGTC	1 cut(s)	817
EaeI	YGGCCR	2 cut(s)	631, 1263
Eam1104I	CTCTTC	3 cut(s)	175, 1686, 1857
EarI	CTCTTC	3 cut(s)	175, 1686, 1857
EciI	GGCGGA	1 cut(s)	1074
Ecl136II	GAGCTC	1 cut(s)	1867
Eco130I	CCWWGG	1 cut(s)	964
Eco24I	GRGCYC	4 cut(s)	684, 854, 1830, 1869
Eco31I	GGTCTC	1 cut(s)	1699
Eco32I	GATATC	1 cut(s)	1464
Eco47I	GGWCC	1 cut(s)	304
Eco53kI	GAGCTC	1 cut(s)	1867
Eco57I	CTGAAG	3 cut(s)	54, 969, 1806
Eco72I	CACGTG	1 cut(s)	911
Eco88I	CYCGRG	4 cut(s)	95, 121, 181, 937
EcoICRI	GAGCTC	1 cut(s)	1867
EcoNI	CCTNNNNNAGG	1 cut(s)	894
EcoRI	GAATTC	1 cut(s)	65
EcoRII	CCWGG	4 cut(s)	1144, 1201, 1600, 1795
EcoRV	GATATC	1 cut(s)	1464
EcoT14I	CCWWGG	1 cut(s)	964
EcoT38I	GRGCYC	4 cut(s)	684, 854, 1830, 1869
EgeI	GGCGCC	1 cut(s)	263
EheI	GGCGCC	1 cut(s)	263
ErhI	CCWWGG	1 cut(s)	964
Esp3I	CGTCTC	1 cut(s)	304
FaeI	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1598, 1927
FaqI	GGGAC	2 cut(s)	1150, 1387
FatI	CATG	7 cut(s)	13, 689, 964, 1024, 1210, 1594, 1923
FauI	CCCGC	2 cut(s)	873, 1165
FblI	GTMKAC	1 cut(s)	809
Fnu4HI	GCNGC	7 cut(s)	39, 237, 713, 1450, 1567, 1638, 1723
FokI	GGATG	2 cut(s)	868, 1276
FriOI	GRGCYC	4 cut(s)	684, 854, 1830, 1869
Fsp4HI	GCNGC	7 cut(s)	39, 237, 713, 1450, 1567, 1638, 1723
FspBI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
GlaI	GCGC	5 cut(s)	240, 263, 1648, 1650, 1905
GluI	GCNGC	7 cut(s)	39, 237, 713, 1450, 1567, 1638, 1723
GsuI	CTGGAG	2 cut(s)	263, 1623
HaeII	RGCGCY	1 cut(s)	265
HaeIII	GGCC	5 cut(s)	193, 633, 668, 1265, 1760
HapII	CCGG	3 cut(s)	329, 661, 1560
HgaI	GACGC	1 cut(s)	932
HhaI	GCGC	5 cut(s)	241, 264, 1649, 1651, 1906
Hin1I	GRCGYC	2 cut(s)	262, 943
Hin1II	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1598, 1927
Hin6I	GCGC	5 cut(s)	239, 262, 1647, 1649, 1904
HinP1I	GCGC	5 cut(s)	239, 262, 1647, 1649, 1904
HincII	GTYRAC	1 cut(s)	810
HindII	GTYRAC	1 cut(s)	810
HindIII	AAGCTT	1 cut(s)	1069
HpaII	CCGG	3 cut(s)	329, 661, 1560
HphI	GGTGA	7 cut(s)	333, 650, 969, 990, 1134, 1446, 1811
Hpy166II	GTNNAC	5 cut(s)	341, 726, 810, 1244, 1751
Hpy188I	TCNGA	8 cut(s)	34, 790, 802, 1018, 1237, 1516, 1699, 1774
Hpy8I	GTNNAC	5 cut(s)	341, 726, 810, 1244, 1751
Hpy99I	CGWCG	2 cut(s)	157, 811
HpyAV	CCTTC	8 cut(s)	40, 342, 694, 896, 993, 1011, 1105, 1149
HpyCH4III	ACNGT	5 cut(s)	395, 583, 807, 1164, 1369
HpyCH4IV	ACGT	3 cut(s)	910, 1078, 1270
HpyCH4V	TGCA	6 cut(s)	466, 704, 712, 1244, 1286, 1725
HpyF10VI	GCNNNNNNNGC	4 cut(s)	674, 1262, 1271, 1646
HpyF3I	CTNAG	6 cut(s)	221, 678, 1236, 1696, 1773, 1858
HpySE526I	ACGT	3 cut(s)	910, 1078, 1270
Hsp92I	GRCGYC	2 cut(s)	262, 943
Hsp92II	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1598, 1927
HspAI	GCGC	5 cut(s)	239, 262, 1647, 1649, 1904
KasI	GGCGCC	1 cut(s)	261
Kzo9I	GATC	4 cut(s)	253, 899, 1046, 1232
LguI	GCTCTTC	1 cut(s)	1857
LmnI	GCTCC	3 cut(s)	849, 1484, 1872
Lsp1109I	GCAGC	6 cut(s)	50, 223, 724, 1578, 1624, 1709
LweI	GCATC	5 cut(s)	14, 691, 1295, 1624, 1843
MaeI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
MaeII	ACGT	3 cut(s)	910, 1078, 1270
MaeIII	GTNAC	9 cut(s)	323, 577, 614, 892, 1227, 1549, 1713, 1874, 1896
MalI	GATC	4 cut(s)	255, 901, 1048, 1234
MbiI	CCGCTC	1 cut(s)	382
MboI	GATC	4 cut(s)	253, 899, 1046, 1232
MflI	RGATCY	1 cut(s)	1046
MhlI	GDGCHC	7 cut(s)	684, 854, 1246, 1258, 1786, 1830, 1869
MlsI	TGGCCA	2 cut(s)	633, 1265
MluI	ACGCGT	1 cut(s)	1010
MluNI	TGGCCA	2 cut(s)	633, 1265
Mly113I	GGCGCC	1 cut(s)	262
MlyI	GAGTC	5 cut(s)	100, 107, 805, 1421, 1786
MmeI	TCCRAC	2 cut(s)	377, 932
Mox20I	TGGCCA	2 cut(s)	633, 1265
MscI	TGGCCA	2 cut(s)	633, 1265
MseI	TTAA	3 cut(s)	210, 870, 1434
Msp20I	TGGCCA	2 cut(s)	633, 1265
MspA1I	CMGCKG	2 cut(s)	715, 1850
MspCI	CTTAAG	1 cut(s)	1433
MspI	CCGG	3 cut(s)	329, 661, 1560
MspR9I	CCNGG	7 cut(s)	329, 662, 1146, 1203, 1560, 1602, 1797
Mva1269I	GAATGC	1 cut(s)	233
MvaI	CCWGG	4 cut(s)	1146, 1203, 1602, 1797
MvnI	CGCG	2 cut(s)	1012, 1649
MwoI	GCNNNNNNNGC	4 cut(s)	674, 1262, 1271, 1646
NarI	GGCGCC	1 cut(s)	262
NciI	CCSGG	3 cut(s)	329, 662, 1560
NcoI	CCATGG	1 cut(s)	964
NdeII	GATC	4 cut(s)	253, 899, 1046, 1232
NlaIII	CATG	7 cut(s)	17, 693, 968, 1028, 1214, 1598, 1927
NlaIV	GGNNCC	4 cut(s)	263, 851, 878, 1785
NmeAIII	GCCGAG	1 cut(s)	219
NmuCI	GTSAC	5 cut(s)	323, 614, 892, 1549, 1713
NspI	RCATGY	2 cut(s)	693, 1927
PaeR7I	CTCGAG	4 cut(s)	95, 121, 181, 937
PauI	GCGCGC	1 cut(s)	1647
PciI	ACATGT	2 cut(s)	689, 1923
PciSI	GCTCTTC	1 cut(s)	1857
PcsI	WCGNNNNNNNCGW	1 cut(s)	179
PctI	GAATGC	1 cut(s)	233
PfeI	GAWTC	7 cut(s)	247, 974, 1222, 1511, 1577, 1700, 1802
PkrI	GCNGC	7 cut(s)	40, 238, 714, 1451, 1568, 1639, 1724
PleI	GAGTC	5 cut(s)	100, 106, 805, 1420, 1785
PluTI	GGCGCC	1 cut(s)	265
PmaCI	CACGTG	1 cut(s)	911
PmlI	CACGTG	1 cut(s)	911
PpsI	GAGTC	5 cut(s)	100, 106, 805, 1420, 1785
Ppu21I	YACGTR	1 cut(s)	911
PscI	ACATGT	2 cut(s)	689, 1923
PsiI	TTATAA	2 cut(s)	603, 1107
Psp124BI	GAGCTC	1 cut(s)	1869
Psp6I	CCWGG	4 cut(s)	1144, 1201, 1600, 1795
PspCI	CACGTG	1 cut(s)	911
PspGI	CCWGG	4 cut(s)	1144, 1201, 1600, 1795
PspN4I	GGNNCC	4 cut(s)	263, 851, 878, 1785
PspPI	GGNCC	1 cut(s)	304
PspXI	VCTCGAGB	1 cut(s)	181
PstI	CTGCAG	2 cut(s)	468, 1727
PsuI	RGATCY	1 cut(s)	1046
PteI	GCGCGC	1 cut(s)	1647
PvuII	CAGCTG	1 cut(s)	1850
RsaI	GTAC	3 cut(s)	462, 1333, 1345
RsaNI	GTAC	3 cut(s)	461, 1332, 1344
SacI	GAGCTC	1 cut(s)	1869
SalI	GTCGAC	1 cut(s)	808
SapI	GCTCTTC	1 cut(s)	1857
SaqAI	TTAA	3 cut(s)	210, 870, 1434
SatI	GCNGC	7 cut(s)	39, 237, 713, 1450, 1567, 1638, 1723
Sau3AI	GATC	4 cut(s)	253, 899, 1046, 1232
Sau96I	GGNCC	1 cut(s)	304
SchI	GAGTC	5 cut(s)	100, 107, 805, 1421, 1786
ScrFI	CCNGG	7 cut(s)	329, 662, 1146, 1203, 1560, 1602, 1797
SduI	GDGCHC	7 cut(s)	684, 854, 1246, 1258, 1786, 1830, 1869
SfaNI	GCATC	5 cut(s)	14, 691, 1295, 1624, 1843
SfcI	CTRYAG	4 cut(s)	464, 1365, 1723, 1845
SfoI	GGCGCC	1 cut(s)	263
Sfr274I	CTCGAG	4 cut(s)	95, 121, 181, 937
SinI	GGWCC	1 cut(s)	304
SlaI	CTCGAG	4 cut(s)	95, 121, 181, 937
SmlI	CTYRAG	7 cut(s)	95, 121, 181, 562, 937, 1433, 1807
SmoI	CTYRAG	7 cut(s)	95, 121, 181, 562, 937, 1433, 1807
SsiI	CCGC	7 cut(s)	382, 715, 866, 1085, 1158, 1449, 1457
SspDI	GGCGCC	1 cut(s)	261
SspI	AATATT	1 cut(s)	555
SspMI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485
SstI	GAGCTC	1 cut(s)	1869
StyD4I	CCNGG	7 cut(s)	327, 660, 1144, 1201, 1558, 1600, 1795
StyI	CCWWGG	1 cut(s)	964
TaaI	ACNGT	5 cut(s)	395, 583, 807, 1164, 1369
TaiI	ACGT	3 cut(s)	913, 1081, 1273
TaqI	TCGA	7 cut(s)	96, 101, 122, 182, 515, 809, 938
TatI	WGTACW	1 cut(s)	1331
TauI	GCSGC	1 cut(s)	1452
TfiI	GAWTC	7 cut(s)	247, 974, 1222, 1511, 1577, 1700, 1802
Tru1I	TTAA	3 cut(s)	210, 870, 1434
Tru9I	TTAA	3 cut(s)	210, 870, 1434
TscAI	CASTG	5 cut(s)	67, 771, 1167, 1258, 1266
TseFI	GTSAC	5 cut(s)	323, 614, 892, 1549, 1713
TseI	GCWGC	6 cut(s)	38, 236, 712, 1566, 1637, 1722
Tsp45I	GTSAC	5 cut(s)	323, 614, 892, 1549, 1713
TspDTI	ATGAA	2 cut(s)	768, 921
TspRI	CASTG	5 cut(s)	67, 771, 1167, 1258, 1266
Vha464I	CTTAAG	1 cut(s)	1433
VneI	GTGCAC	1 cut(s)	1242
VpaK11BI	GGWCC	1 cut(s)	304
XagI	CCTNNNNNAGG	1 cut(s)	894
XapI	RAATTY	3 cut(s)	65, 606, 636
XbaI	TCTAGA	1 cut(s)	1415
XceI	RCATGY	2 cut(s)	693, 1927
XhoI	CTCGAG	4 cut(s)	95, 121, 181, 937
XmiI	GTMKAC	1 cut(s)	809
XspI	CTAG	5 cut(s)	345, 360, 486, 1416, 1485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.