Rh2AG293200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
36163112 .. 36165742
2631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG293200.1

Sequence Viewer

Length: 267 bp
ATGTATCGGAAGTGTGCAGAAGAGAAGAGAGCAGGAGACGGGAAGAGCTCAATTCAAGTTTTTTATGACAGTCATCAAATGTACTACCCAGCCATCAAACTCTCAGATAGAATTTTAGCTTTTTCGCGAAGCCTCGATCGACATCCATCTTCACTATTTCGTAGGATATTCGTCTTTTATACTGGTGGATTACAGTTGTCAGTATTGTGGACTGGAGTATCTGCCTGTTTTTGCTTCCTTGATTGGATCTTGCTGTATCTAGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

88

Amino Acids

10.26

Weight (kDa)

9.15

Isoelectric Point (pI)

67.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 127
AclWI GGATC 1 cut(s) 254
AcsI RAATTY 1 cut(s) 111
AfaI GTAC 1 cut(s) 83
AgsI TTSAA 1 cut(s) 56
AluBI AGCT 2 cut(s) 48, 119
AluI AGCT 2 cut(s) 48, 119
Alw21I GWGCWC 1 cut(s) 50
Alw26I GTCTC 1 cut(s) 30
AlwI GGATC 1 cut(s) 254
ApoI RAATTY 1 cut(s) 111
BaeI ACNNNNGTAYC 2 cut(s) 201, 234
BanII GRGCYC 1 cut(s) 50
Bbv12I GWGCWC 1 cut(s) 50
BccI CCATC 2 cut(s) 101, 154
BcoDI GTCTC 1 cut(s) 30
BfaI CTAG 1 cut(s) 260
BpmI CTGGAG 1 cut(s) 234
BsaBI GATNNNNATC 1 cut(s) 141
Bse1I ACTGG 2 cut(s) 187, 217
Bse8I GATNNNNATC 1 cut(s) 141
BseGI GGATG 1 cut(s) 142
BseJI GATNNNNATC 1 cut(s) 141
BseMII CTCAG 1 cut(s) 117
BseNI ACTGG 2 cut(s) 187, 217
BseYI CCCAGC 1 cut(s) 88
BsgI GTGCAG 1 cut(s) 36
Bsh1236I CGCG 1 cut(s) 127
Bsh1285I CGRYCG 1 cut(s) 139
BsiEI CGRYCG 1 cut(s) 139
BsiHKAI GWGCWC 1 cut(s) 50
BsmAI GTCTC 1 cut(s) 30
BsmBI CGTCTC 1 cut(s) 30
Bsp1286I GDGCHC 1 cut(s) 50
Bsp143I GATC 2 cut(s) 136, 246
Bsp68I TCGCGA 1 cut(s) 127
BspCNI CTCAG 1 cut(s) 116
BspFNI CGCG 1 cut(s) 127
BspPI GGATC 1 cut(s) 254
BspQI GCTCTTC 1 cut(s) 38
BsrI ACTGG 2 cut(s) 187, 217
BssMI GATC 2 cut(s) 136, 246
Bst4CI ACNGT 2 cut(s) 71, 195
Bst6I CTCTTC 3 cut(s) 15, 20, 38
BstDEI CTNAG 1 cut(s) 103
BstF5I GGATG 1 cut(s) 142
BstFNI CGCG 1 cut(s) 127
BstKTI GATC 2 cut(s) 139, 249
BstMAI GTCTC 1 cut(s) 30
BstMBI GATC 2 cut(s) 136, 246
BstMCI CGRYCG 1 cut(s) 139
BstUI CGCG 1 cut(s) 127
BstX2I RGATCY 1 cut(s) 246
BstYI RGATCY 1 cut(s) 246
BtsCI GGATG 1 cut(s) 142
BtuMI TCGCGA 1 cut(s) 127
Csp6I GTAC 1 cut(s) 82
CviJI RGCY 4 cut(s) 48, 92, 119, 132
CviKI_1 RGCY 4 cut(s) 48, 92, 119, 132
CviQI GTAC 1 cut(s) 82
DdeI CTNAG 1 cut(s) 103
DpnI GATC 2 cut(s) 138, 248
DpnII GATC 2 cut(s) 136, 246
Eam1104I CTCTTC 3 cut(s) 15, 20, 38
EarI CTCTTC 3 cut(s) 15, 20, 38
Ecl136II GAGCTC 1 cut(s) 48
Eco24I GRGCYC 1 cut(s) 50
Eco53kI GAGCTC 1 cut(s) 48
EcoICRI GAGCTC 1 cut(s) 48
EcoT38I GRGCYC 1 cut(s) 50
Esp3I CGTCTC 1 cut(s) 30
FaiI YATR 2 cut(s) 66, 180
FokI GGATG 1 cut(s) 129
FriOI GRGCYC 1 cut(s) 50
FspBI CTAG 1 cut(s) 260
GsaI CCCAGC 1 cut(s) 92
GsuI CTGGAG 1 cut(s) 234
Hpy166II GTNNAC 1 cut(s) 210
Hpy188I TCNGA 2 cut(s) 9, 106
Hpy188III TCNNGA 1 cut(s) 126
Hpy8I GTNNAC 1 cut(s) 210
HpyCH4III ACNGT 2 cut(s) 71, 195
HpyCH4V TGCA 1 cut(s) 17
HpyF3I CTNAG 1 cut(s) 103
Kzo9I GATC 2 cut(s) 136, 246
LguI GCTCTTC 1 cut(s) 38
LpnPI CCDG 5 cut(s) 18, 102, 168, 198, 238
MaeI CTAG 1 cut(s) 260
MalI GATC 2 cut(s) 138, 248
MboI GATC 2 cut(s) 136, 246
MboII GAAGA 4 cut(s) 32, 37, 55, 141
MflI RGATCY 1 cut(s) 246
MhlI GDGCHC 1 cut(s) 50
MluCI AATT 2 cut(s) 51, 111
MnlI CCTC 1 cut(s) 143
MvnI CGCG 1 cut(s) 127
NdeII GATC 2 cut(s) 136, 246
NruI TCGCGA 1 cut(s) 127
PciSI GCTCTTC 1 cut(s) 38
Ple19I CGATCG 1 cut(s) 139
Psp124BI GAGCTC 1 cut(s) 50
PspFI CCCAGC 1 cut(s) 88
PsuI RGATCY 1 cut(s) 246
PvuI CGATCG 1 cut(s) 139
RruI TCGCGA 1 cut(s) 127
RsaI GTAC 1 cut(s) 83
RsaNI GTAC 1 cut(s) 82
SacI GAGCTC 1 cut(s) 50
SapI GCTCTTC 1 cut(s) 38
Sau3AI GATC 2 cut(s) 136, 246
SduI GDGCHC 1 cut(s) 50
SetI ASST 2 cut(s) 50, 121
Sse9I AATT 2 cut(s) 51, 111
SspMI CTAG 1 cut(s) 260
SstI GAGCTC 1 cut(s) 50
TaaI ACNGT 2 cut(s) 71, 195
TaqI TCGA 2 cut(s) 135, 139
TasI AATT 2 cut(s) 51, 111
TatI WGTACW 1 cut(s) 81
XapI RAATTY 1 cut(s) 111
XspI CTAG 1 cut(s) 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.