Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002050

Physical Location & Seq

Genomic Coordinates Forward (+)

28294336 .. 28296528

Gene Structure 2193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0267900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGTATGCCTTTGGCTTTTACAAGCAAGGCAATGGATTTGCTGTAGGGATAGTTGTTGCTGCAGTCCCCCAAAAGACTGTGGTGTGGACTGCAGATCGAGATGGTGGACTAGTCTCAGACAATGCCACCTTGTTCTTCACAAGTGATGGGATTGCCTTGCAGTCGACAGAAGGGCGAAGTTTGGTGGTTGAGTCTCCAATGCCTATTTCTTCTGCTACGATGCTTGATTCGGGTAATTTTGTGCTGTACAATGCGAGTCGGGCAGTATATCCTGTGGACACTCCACCAGTATCTCAATATGCGTACTATGCATCTCTCACATATCTACCAGGATCAAATGTGTCGCTAAATTTTGGTGTTGATGGCCGTCTCTACTTGCTCAGTGATACTGGTGGAAATTATTTAAAGAATATCACCGATGGAGGTCTTCCCATTCAAGGAAAATCTTATCTTGTGAGAATTGATGCAGATGGGATTCTTCGTCTGTATTCATATGATCTGAAACAGAAAGGAAATTGGTCTATTAAATGGGAATCTTCCACGAATAGATGTGACCCTAAAGGTATATGCGGAGTTAATAGTTACTGTGTAACAATGGGCTGTAGATGTCTTCCTGGATTCGAATTTGTCAACCCGGCAAATCAGACTTCAGGTTGTGAGAGAAATTCTTCCGTTGGAGATGTTTGCAGATCGAAGAATTGGAATTGCAACTACACCATGCAAGAACTGGGCAGCACAGCATGGTATGATGAGCCATATGTGGTTCTGTCATCTTCAGGTAAAGAAGATTGCAAACAAGCCTGTTTGGAGGATTTGAACTGTCTGGCTGCAGTTTTTGACGGTTCAAGTTGCAGAAAGCAGAGGCTTCCTTTGAGATACGGAAGAAGAGAGGAGGATACTTTAAACGTAATTTTCCTCAAGGAGGTTGTCATGTCTTCTGCAGCTCCAGCTCCAGATGCGGTTGTTCCAAAAGGAAGCAGGAAAAATGGTAGAATTGTATTCTTGATTGTTGGCGTGTCATTTACTGCTTTGGGGTCCATTTTGTTGGTGATTTCTGTAATTGTATTATGGAAACACAATGTCTGGGCATATAAAAGAATGAATGAGCTCAATGGTGATGCTAAGTGGAATGAGGATGTGGCTCTGCGACCATATGCTTATGAAGAGCTAGAAAAGATGACTAATAATTTCAATGATGAGGTTGGTAGAGGAGCCTCAGGAACAGTTTACAAAGGGGTGATCGAAAATAGCCAAAAGCTAGTTGCTGTCAAGAGACTTGAGAAAGTTGCAGCTGAAGGCGACAAAGAATTTCAGACTGAAATGAGAATTATTGGCAGAACCCATCATCGGAATTTAGTCCGTTTATTTGGGTACTGTCTTGATGGACCAAAGAAGCTTTTAGTGTATGAGTACATGAGCGATGGTTCACTTGCAGATATACTCTTCACACCTGAGAGGAAACCTTATTGGGAAAAAAGAATGGGAATTGCAAGGAACATAGCACGAGGGTTTCTTTATCTCCATGAAGAGTGTGATACACAGATCATTCACTGCGACATAAAACCTCAAAACATACTGATGGATGAGTACATGTGCCCAAAAATCTCTGACTTCGGACTGGCCAAGCTGCTTCAACCAGAGCAGACCAGAACCACTACCGGCATTAGAGGGACTAAAGGGTATGTTGCGCCTGAGTGGCATAGGAAAATGCCTATAACAGTTAAAGCAGATGTTTACAGCTTTGGAATTGTGCTGTTGGAGATTTTATGCTGTCGAAGGAATGTAGACTGGAGTCTTCCTCATGATGAAGCTATCTTGGATGAATTGGTCTACCATTATTTTGAGAGTGGTGAGCTCAGGAAATTGGTTGGGGATGAAAACATAGACAGAAAGCAATTGGAAAGGGTGGTTAAAGTGGGACTTTGGTGCATCCAGGATGAGCCGTCACTCCGTCCTTCTATGAAGAAGGTTCTGCTTATGTTGGAAGGGACTGTAGAAATCCCAGTTCCTCCTAGTCCAAATTCATTTCTCAGTACCATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

680

Amino Acids

76.12

Weight (kDa)

6.51

Isoelectric Point (pI)

44.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
S_locus_glycop	PF00954	152 - 208	6.3e-06	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	397 - 658	6.9e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	398 - 658	1.2e-46	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002050)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0315571 RchiOBHm_Chr1g0374311 RchiOBHm_Chr5g0047891 RchiOBHm_Chr5g0060791 RchiOBHm_Chr5g0066751 RchiOBHm_Chr6g0272631
rosa_laevigata	RLG00000036779
rosa_multiflora	Rmu_sc0002889.1_g000033 Rmu_sc0006392.1_g000004 Rmu_sc0009734.1_g000006
rosa_roxburghii	Rroxscaffold_1G00047650 Rroxscaffold_2G00091830 Rroxscaffold_2G00145280 Rroxscaffold_3G00274360 Rroxscaffold_4G00295550 Rroxscaffold_6G00397480 Rroxscaffold_6G00399280 Rroxscaffold_7G00157790 Rroxscaffold_7G00200250
rosa_rugosa	Rorug02G0265200 Rorug02G0265300 Rorug02G0266300 Rorug02G0267300 Rorug02G0267900 Rorug02G0268700 Rorug02G0269400 Rorug03G0246800 Rorug03G0247400 Rorug04G0431800
rosa_samantha	Rh1AG015400 Rh1AG409700 Rh2AG293200 Rh2AG451400 Rh2BG176800 Rh2BG293700 Rh2CG415700 Rh2CG514600 Rh2DG317200 Rh3AG302300 Rh3BG369200 Rh3BG376300 Rh3DG335200 Rh3DG373000 Rh5BG325100 Rh7DG147200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	164, 1785, 1830
AciI	CCGC	2 cut(s)	570, 959
AclWI	GGATC	1 cut(s)	340
AcoI	YGGCCR	2 cut(s)	364, 1620
AcsI	RAATTY	6 cut(s)	349, 623, 664, 1307, 1351, 2020
AcuI	CTGAAG	3 cut(s)	633, 759, 1314
AfaI	GTAC	6 cut(s)	248, 305, 1373, 1412, 1589, 2035
AfiI	CCNNNNNNNGG	3 cut(s)	437, 922, 1347
AflIII	ACRYGT	1 cut(s)	1590
AgsI	TTSAA	5 cut(s)	437, 817, 846, 1192, 1634
AhlI	ACTAGT	1 cut(s)	109
AjnI	CCWGG	3 cut(s)	328, 613, 1932
AjuI	GAANNNNNNNTTGG	2 cut(s)	190, 222
Alw21I	GWGCWC	2 cut(s)	1110, 1857
Alw26I	GTCTC	4 cut(s)	118, 198, 374, 1267
AlwI	GGATC	1 cut(s)	340
AoxI	GGCC	2 cut(s)	364, 1620
ApeKI	GCWGC	6 cut(s)	59, 732, 827, 941, 1289, 1627
ApoI	RAATTY	6 cut(s)	349, 623, 664, 1307, 1351, 2020
Asp700I	GAANNNNTTC	1 cut(s)	667
AspLEI	GCGC	1 cut(s)	1690
AspS9I	GGNCC	2 cut(s)	1035, 1385
AsuC2I	CCSGG	1 cut(s)	635
AsuHPI	GGTGA	5 cut(s)	406, 1060, 1127, 1249, 1862
AsuII	TTCGAA	1 cut(s)	621
AvaII	GGWCC	2 cut(s)	1035, 1385
AxyI	CCTNAGG	1 cut(s)	1216
BaeGI	GKGCMC	1 cut(s)	1598
BalI	TGGCCA	1 cut(s)	1622
BanII	GRGCYC	2 cut(s)	1110, 1857
BauI	CACGAG	1 cut(s)	1503
BbsI	GAAGAC	4 cut(s)	419, 602, 927, 1787
Bbv12I	GWGCWC	2 cut(s)	1110, 1857
BbvI	GCAGC	6 cut(s)	46, 744, 814, 953, 1301, 1614
BccI	CCATC	9 cut(s)	95, 140, 356, 413, 464, 1350, 1376, 1415, 1573
BceAI	ACGGC	2 cut(s)	351, 1927
BciT130I	CCWGG	3 cut(s)	330, 615, 1934
BciVI	GTATCC	1 cut(s)	889
BcnI	CCSGG	1 cut(s)	635
BcoDI	GTCTC	4 cut(s)	118, 198, 374, 1267
BcuI	ACTAGT	1 cut(s)	109
BfaI	CTAG	5 cut(s)	110, 1169, 1259, 2013, 2041
BfmI	CTRYAG	7 cut(s)	42, 60, 90, 601, 828, 939, 1992
BfuI	GTATCC	1 cut(s)	889
BglI	GCCNNNNNGGC	1 cut(s)	1696
BisI	GCNGC	6 cut(s)	60, 733, 828, 942, 1290, 1628
BlsI	GCNGC	6 cut(s)	61, 734, 829, 943, 1291, 1629
Bme1390I	CCNGG	4 cut(s)	330, 615, 635, 1934
Bme18I	GGWCC	2 cut(s)	1035, 1385
BmgT120I	GGNCC	2 cut(s)	1035, 1385
BmiI	GGNNCC	2 cut(s)	1036, 1213
BmrFI	CCNGG	4 cut(s)	330, 615, 635, 1934
BmrI	ACTGGG	2 cut(s)	737, 1997
BmsI	GCATC	6 cut(s)	210, 320, 454, 946, 1108, 1938
BmuI	ACTGGG	2 cut(s)	737, 1997
BoxI	GACNNNNGTC	1 cut(s)	1791
BpiI	GAAGAC	4 cut(s)	419, 602, 927, 1787
BplI	GAGNNNNNCTC	2 cut(s)	1783, 1815
BpmI	CTGGAG	3 cut(s)	930, 936, 1810
Bpu10I	CCTNAGC	1 cut(s)	1856
Bpu14I	TTCGAA	1 cut(s)	621
BpuEI	CTTGAG	2 cut(s)	902, 1298
BpuMI	CCSGG	1 cut(s)	635
Bsc4I	CCNNNNNNNGG	3 cut(s)	437, 922, 1347
Bse118I	RCCGGY	1 cut(s)	1658
Bse1I	ACTGG	6 cut(s)	287, 394, 732, 1623, 1793, 2003
Bse21I	CCTNAGG	1 cut(s)	1216
Bse3DI	GCAATG	1 cut(s)	37
BseBI	CCWGG	3 cut(s)	330, 615, 1934
BseGI	GGATG	6 cut(s)	1141, 1588, 1825, 1879, 1929, 1942
BseLI	CCNNNNNNNGG	3 cut(s)	437, 922, 1347
BseMI	GCAATG	1 cut(s)	37
BseMII	CTCAG	6 cut(s)	129, 394, 1230, 1443, 1683, 1870
BseNI	ACTGG	6 cut(s)	287, 394, 732, 1623, 1793, 2003
BseRI	GAGGAG	2 cut(s)	905, 1224
BseSI	GKGCMC	1 cut(s)	1598
BseXI	GCAGC	6 cut(s)	46, 744, 814, 953, 1301, 1614
BshFI	GGCC	2 cut(s)	366, 1622
BsiHKAI	GWGCWC	2 cut(s)	1110, 1857
BsiSI	CCGG	2 cut(s)	635, 1659
BslFI	GGGAC	4 cut(s)	50, 1684, 1932, 2002
BslI	CCNNNNNNNGG	3 cut(s)	437, 922, 1347
BsmAI	GTCTC	4 cut(s)	118, 198, 374, 1267
BsmBI	CGTCTC	1 cut(s)	374
BsmFI	GGGAC	4 cut(s)	50, 1684, 1932, 2002
BsnI	GGCC	2 cut(s)	366, 1622
Bsp119I	TTCGAA	1 cut(s)	621
Bsp1286I	GDGCHC	3 cut(s)	1110, 1598, 1857
Bsp1407I	TGTACA	1 cut(s)	246
Bsp143I	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
BspACI	CCGC	2 cut(s)	570, 959
BspANI	GGCC	2 cut(s)	366, 1622
BspCNI	CTCAG	7 cut(s)	128, 393, 1229, 1444, 1684, 1869, 2043
BspHI	TCATGA	1 cut(s)	1801
BspLI	GGNNCC	2 cut(s)	1036, 1213
BspMAI	CTGCAG	4 cut(s)	64, 94, 832, 943
BspPI	GGATC	1 cut(s)	340
BspQI	GCTCTTC	1 cut(s)	1158
BspT104I	TTCGAA	1 cut(s)	621
BsrDI	GCAATG	1 cut(s)	37
BsrFI	RCCGGY	1 cut(s)	1658
BsrGI	TGTACA	1 cut(s)	246
BsrI	ACTGG	6 cut(s)	287, 394, 732, 1623, 1793, 2003
BssAI	RCCGGY	1 cut(s)	1658
BssMI	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
BssSI	CACGAG	1 cut(s)	1503
Bst2BI	CACGAG	1 cut(s)	1503
Bst2UI	CCWGG	3 cut(s)	330, 615, 1934
Bst4CI	ACNGT	8 cut(s)	79, 587, 821, 842, 1225, 1376, 1720, 1993
Bst6I	CTCTTC	4 cut(s)	880, 1158, 1448, 1521
BstAUI	TGTACA	1 cut(s)	246
BstBI	TTCGAA	1 cut(s)	621
BstDEI	CTNAG	8 cut(s)	115, 380, 1122, 1216, 1452, 1692, 1856, 2030
BstENI	CCTNNNNNAGG	1 cut(s)	920
BstF5I	GGATG	6 cut(s)	1141, 1588, 1825, 1879, 1929, 1942
BstHHI	GCGC	1 cut(s)	1690
BstKTI	GATC	6 cut(s)	97, 335, 499, 692, 1242, 1545
BstMAI	GTCTC	4 cut(s)	118, 198, 374, 1267
BstMBI	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
BstMWI	GCNNNNNNNGC	5 cut(s)	260, 308, 947, 956, 1696
BstNI	CCWGG	3 cut(s)	330, 615, 1934
BstNSI	RCATGY	1 cut(s)	1594
BstPAI	GACNNNNGTC	1 cut(s)	1791
BstSCI	CCNGG	4 cut(s)	328, 613, 633, 1932
BstSFI	CTRYAG	7 cut(s)	42, 60, 90, 601, 828, 939, 1992
BstSLI	GKGCMC	1 cut(s)	1598
BstV1I	GCAGC	6 cut(s)	46, 744, 814, 953, 1301, 1614
BstV2I	GAAGAC	4 cut(s)	419, 602, 927, 1787
BstXI	CCANNNNNNTGG	1 cut(s)	1045
Bsu36I	CCTNAGG	1 cut(s)	1216
BsuI	GTATCC	1 cut(s)	889
BsuRI	GGCC	2 cut(s)	366, 1622
BtgZI	GCGATG	1 cut(s)	1434
BtsCI	GGATG	6 cut(s)	1141, 1588, 1825, 1879, 1929, 1942
BtsI	GCAGTG	1 cut(s)	1549
BtsIMutI	CAGTG	2 cut(s)	388, 1549
CciI	TCATGA	1 cut(s)	1801
CfoI	GCGC	1 cut(s)	1690
Cfr10I	RCCGGY	1 cut(s)	1658
Cfr13I	GGNCC	2 cut(s)	1035, 1385
Csp6I	GTAC	6 cut(s)	247, 304, 1372, 1411, 1588, 2034
CviAII	CATG	7 cut(s)	718, 741, 931, 1414, 1523, 1591, 1802
CviQI	GTAC	6 cut(s)	247, 304, 1372, 1411, 1588, 2034
DdeI	CTNAG	8 cut(s)	115, 380, 1122, 1216, 1452, 1692, 1856, 2030
DpnI	GATC	6 cut(s)	96, 334, 498, 691, 1241, 1544
DpnII	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
DraI	TTTAAA	2 cut(s)	405, 903
EaeI	YGGCCR	2 cut(s)	364, 1620
Eam1104I	CTCTTC	4 cut(s)	880, 1158, 1448, 1521
EarI	CTCTTC	4 cut(s)	880, 1158, 1448, 1521
Ecl136II	GAGCTC	2 cut(s)	1108, 1855
Eco24I	GRGCYC	2 cut(s)	1110, 1857
Eco47I	GGWCC	2 cut(s)	1035, 1385
Eco53kI	GAGCTC	2 cut(s)	1108, 1855
Eco57I	CTGAAG	3 cut(s)	633, 759, 1314
Eco81I	CCTNAGG	1 cut(s)	1216
EcoICRI	GAGCTC	2 cut(s)	1108, 1855
EcoNI	CCTNNNNNAGG	1 cut(s)	920
EcoRII	CCWGG	3 cut(s)	328, 613, 1932
EcoT22I	ATGCAT	1 cut(s)	313
EcoT38I	GRGCYC	2 cut(s)	1110, 1857
Esp3I	CGTCTC	1 cut(s)	374
FaeI	CATG	7 cut(s)	721, 744, 934, 1417, 1526, 1594, 1805
FalI	AAGNNNNNCTT	2 cut(s)	1905, 1937
FaqI	GGGAC	4 cut(s)	50, 1684, 1932, 2002
FatI	CATG	7 cut(s)	717, 740, 930, 1413, 1522, 1590, 1801
FauNDI	CATATG	3 cut(s)	493, 757, 1153
FblI	GTMKAC	3 cut(s)	164, 1785, 1830
Fnu4HI	GCNGC	6 cut(s)	60, 733, 828, 942, 1290, 1628
FokI	GGATG	6 cut(s)	1148, 1595, 1832, 1886, 1916, 1949
FriOI	GRGCYC	2 cut(s)	1110, 1857
Fsp4HI	GCNGC	6 cut(s)	60, 733, 828, 942, 1290, 1628
FspBI	CTAG	5 cut(s)	110, 1169, 1259, 2013, 2041
GlaI	GCGC	1 cut(s)	1689
GluI	GCNGC	6 cut(s)	60, 733, 828, 942, 1290, 1628
GsuI	CTGGAG	3 cut(s)	930, 936, 1810
HaeIII	GGCC	2 cut(s)	366, 1622
HapII	CCGG	2 cut(s)	635, 1659
HhaI	GCGC	1 cut(s)	1690
Hin1II	CATG	7 cut(s)	721, 744, 934, 1417, 1526, 1594, 1805
Hin6I	GCGC	1 cut(s)	1688
HinP1I	GCGC	1 cut(s)	1688
HincII	GTYRAC	2 cut(s)	165, 631
HindII	GTYRAC	2 cut(s)	165, 631
HindIII	AAGCTT	1 cut(s)	1394
HinfI	GANTC	7 cut(s)	191, 227, 256, 475, 533, 618, 1792
HpaII	CCGG	2 cut(s)	635, 1659
HphI	GGTGA	5 cut(s)	406, 1060, 1127, 1249, 1862
Hpy188I	TCNGA	7 cut(s)	118, 501, 645, 1314, 1350, 1609, 1616
Hpy188III	TCNNGA	8 cut(s)	98, 953, 1003, 1218, 1270, 1379, 1802, 1858
HpyAV	CCTTC	6 cut(s)	164, 1289, 1770, 1960, 1965, 1979
HpyCH4III	ACNGT	8 cut(s)	79, 587, 821, 842, 1225, 1376, 1720, 1993
HpyCH4IV	ACGT	1 cut(s)	906
HpyF10VI	GCNNNNNNNGC	5 cut(s)	260, 308, 947, 956, 1696
HpyF3I	CTNAG	8 cut(s)	115, 380, 1122, 1216, 1452, 1692, 1856, 2030
HpySE526I	ACGT	1 cut(s)	906
Hsp92II	CATG	7 cut(s)	721, 744, 934, 1417, 1526, 1594, 1805
HspAI	GCGC	1 cut(s)	1688
Kzo9I	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
LguI	GCTCTTC	1 cut(s)	1158
LmnI	GCTCC	3 cut(s)	949, 955, 1211
Lsp1109I	GCAGC	6 cut(s)	46, 744, 814, 953, 1301, 1614
LweI	GCATC	6 cut(s)	210, 320, 454, 946, 1108, 1938
MaeI	CTAG	5 cut(s)	110, 1169, 1259, 2013, 2041
MaeII	ACGT	1 cut(s)	906
MaeIII	GTNAC	4 cut(s)	551, 581, 589, 1944
MalI	GATC	6 cut(s)	96, 334, 498, 691, 1241, 1544
MboI	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
MfeI	CAATTG	1 cut(s)	1895
MhlI	GDGCHC	3 cut(s)	1110, 1598, 1857
MlsI	TGGCCA	1 cut(s)	1622
MluNI	TGGCCA	1 cut(s)	1622
MlyI	GAGTC	3 cut(s)	200, 265, 1801
MmeI	TCCRAC	3 cut(s)	655, 1737, 1962
Mox20I	TGGCCA	1 cut(s)	1622
Mph1103I	ATGCAT	1 cut(s)	313
MroXI	GAANNNNTTC	1 cut(s)	667
MscI	TGGCCA	1 cut(s)	1622
MseI	TTAA	6 cut(s)	404, 525, 576, 902, 1722, 1911
MslI	CAYNNNNRTG	1 cut(s)	1577
Msp20I	TGGCCA	1 cut(s)	1622
MspA1I	CMGCKG	1 cut(s)	1292
MspI	CCGG	2 cut(s)	635, 1659
MspR9I	CCNGG	4 cut(s)	330, 615, 635, 1934
MunI	CAATTG	1 cut(s)	1895
MvaI	CCWGG	3 cut(s)	330, 615, 1934
MwoI	GCNNNNNNNGC	5 cut(s)	260, 308, 947, 956, 1696
NciI	CCSGG	1 cut(s)	635
NdeI	CATATG	3 cut(s)	493, 757, 1153
NdeII	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
NlaIII	CATG	7 cut(s)	721, 744, 934, 1417, 1526, 1594, 1805
NlaIV	GGNNCC	2 cut(s)	1036, 1213
NmuCI	GTSAC	2 cut(s)	551, 1944
NsiI	ATGCAT	1 cut(s)	313
NspI	RCATGY	1 cut(s)	1594
NspV	TTCGAA	1 cut(s)	621
PagI	TCATGA	1 cut(s)	1801
PciI	ACATGT	1 cut(s)	1590
PciSI	GCTCTTC	1 cut(s)	1158
PdmI	GAANNNNTTC	1 cut(s)	667
PfeI	GAWTC	4 cut(s)	227, 475, 533, 618
PfoI	TCCNGGA	2 cut(s)	613, 1932
PkrI	GCNGC	6 cut(s)	61, 734, 829, 943, 1291, 1629
PleI	GAGTC	3 cut(s)	199, 264, 1800
PpsI	GAGTC	3 cut(s)	199, 264, 1800
PscI	ACATGT	1 cut(s)	1590
PshAI	GACNNNNGTC	1 cut(s)	1791
Psp124BI	GAGCTC	2 cut(s)	1110, 1857
Psp6I	CCWGG	3 cut(s)	328, 613, 1932
PspGI	CCWGG	3 cut(s)	328, 613, 1932
PspN4I	GGNNCC	2 cut(s)	1036, 1213
PspPI	GGNCC	2 cut(s)	1035, 1385
PstI	CTGCAG	4 cut(s)	64, 94, 832, 943
PvuII	CAGCTG	1 cut(s)	1292
RsaI	GTAC	6 cut(s)	248, 305, 1373, 1412, 1589, 2035
RsaNI	GTAC	6 cut(s)	247, 304, 1372, 1411, 1588, 2034
RseI	CAYNNNNRTG	1 cut(s)	1577
SacI	GAGCTC	2 cut(s)	1110, 1857
SalI	GTCGAC	1 cut(s)	163
SapI	GCTCTTC	1 cut(s)	1158
SaqAI	TTAA	6 cut(s)	404, 525, 576, 902, 1722, 1911
SatI	GCNGC	6 cut(s)	60, 733, 828, 942, 1290, 1628
Sau3AI	GATC	6 cut(s)	94, 332, 496, 689, 1239, 1542
Sau96I	GGNCC	2 cut(s)	1035, 1385
SchI	GAGTC	3 cut(s)	200, 265, 1801
ScrFI	CCNGG	4 cut(s)	330, 615, 635, 1934
SduI	GDGCHC	3 cut(s)	1110, 1598, 1857
SfaNI	GCATC	6 cut(s)	210, 320, 454, 946, 1108, 1938
SfcI	CTRYAG	7 cut(s)	42, 60, 90, 601, 828, 939, 1992
SfuI	TTCGAA	1 cut(s)	621
SinI	GGWCC	2 cut(s)	1035, 1385
SmiMI	CAYNNNNRTG	1 cut(s)	1577
SmlI	CTYRAG	2 cut(s)	917, 1277
SmoI	CTYRAG	2 cut(s)	917, 1277
SpeI	ACTAGT	1 cut(s)	109
SsiI	CCGC	2 cut(s)	570, 959
SspMI	CTAG	5 cut(s)	110, 1169, 1259, 2013, 2041
SstI	GAGCTC	2 cut(s)	1110, 1857
StyD4I	CCNGG	4 cut(s)	328, 613, 633, 1932
TaaI	ACNGT	8 cut(s)	79, 587, 821, 842, 1225, 1376, 1720, 1993
TaiI	ACGT	1 cut(s)	909
TaqI	TCGA	6 cut(s)	97, 164, 621, 692, 1242, 1774
TatI	WGTACW	3 cut(s)	246, 1410, 1587
TfiI	GAWTC	4 cut(s)	227, 475, 533, 618
Tru1I	TTAA	6 cut(s)	404, 525, 576, 902, 1722, 1911
Tru9I	TTAA	6 cut(s)	404, 525, 576, 902, 1722, 1911
TscAI	CASTG	2 cut(s)	388, 1556
TseFI	GTSAC	2 cut(s)	551, 1944
TseI	GCWGC	6 cut(s)	59, 732, 827, 941, 1289, 1627
Tsp45I	GTSAC	2 cut(s)	551, 1944
TspDTI	ATGAA	9 cut(s)	480, 1115, 1176, 1539, 1821, 1836, 1890, 1976, 2013
TspGWI	ACGGA	4 cut(s)	661, 894, 1349, 1940
TspRI	CASTG	2 cut(s)	388, 1556
VpaK11BI	GGWCC	2 cut(s)	1035, 1385
XagI	CCTNNNNNAGG	1 cut(s)	920
XapI	RAATTY	6 cut(s)	349, 623, 664, 1307, 1351, 2020
XceI	RCATGY	1 cut(s)	1594
XcmI	CCANNNNNNNNNTGG	1 cut(s)	724
XmiI	GTMKAC	3 cut(s)	164, 1785, 1830
XmnI	GAANNNNTTC	1 cut(s)	667
XspI	CTAG	5 cut(s)	110, 1169, 1259, 2013, 2041
Zsp2I	ATGCAT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.