Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002547

Physical Location & Seq

Genomic Coordinates Forward (+)

46475447 .. 46480814

Gene Structure 5368 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0365900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGGAAATGATGTGGTTCCTCCTCTTCATCCTCTCCCTCTTATTCACTTTGCTGTTCAAATCCCTTCTATTTTCCTCTAAACCCTCCACCAAAATCGACGGCACTATTCTACCGCCGGGACCCACCTCAATTCCCATAATCGGAAACTTCATATGGCTCTACAAACTAGCTTCCGGAATCGAACCCATACTTGTTGACCTCCACGCCAAGTATGGCCCTGTCGTCTCCCTCCCCCTTCCCTTCAGCCCTCACCCCGCCATTTTCATCAACGACCACTCACTCGCCCACCAAACCTTGGTTCAAAACGGCGCCGTGTGTGCGGACCGCCCTCCTCCCCAGCCCATCACCAAGCTCATCACTAACAACAACCGTGTCATCTTCAGCAGCCGCTACGGCCCAACATGGCGTCTCCTCCGCCGAAACCTCATGTCCGAGGTTCTAAACCCTTCTCGGCTCAAGTCCTACGCTTCTTCCCGAAAATGGGCTTTAGATATCCTCACCAACCGGCTCGATCAGTCCGTATCATCAAACGGACCTGTCGTCGAAGTTTTAGAACACTTCCGGATCTCCATAACTTCTTTGTTCGTGTATATGACTTTTGGTGTGAAGGTGGAGGATGAGGCGAAGATGAAAGAAATCATCGATGTTCAGCGTCGCTTTATCTTTGGTTTGGTAAGAGGCTTTCAGACCCTAAACTTGGGACCCAGGTGGTTGAACAAGATTTTGTTCCGTAAGGGTTGGAATCAGTTCTACGAAATTCGAAAGCAACAAAAGGACGTCCTGCTCCCTTTCATACAGGCACGGAAGAAGGTTAAACAAGAAAGAGTAGATGAGAACAACGATGACTTCATGATAGCTTATGTTGATACATTAATGGATTTAGAAGACCCTCTCGAGAACAGAGCATTCAATGAAGGAGAACTAGTGGATCAATGCTCCGAGGTCTTGAACTCCGGCACGGACACCATGTCAGTAACATTGCAGTGGACGATGGCGAATGTAGTGAAATATCCACGTGTTCAGAATAGGCTTGTTGAAGAGATTACAGAGGTTGTGGGGGTTGGAAACGAAGAAATGAAACAGGAGGATCTTCAGAAGATGCACTATTTGAAAGCAGTGGTGATGGAGGCTCTAAGGCTTCACCCACCAGGCCACTTTGTGGTTCCACACTCGCTTACAGAGGACATTGTTCTGGATGGACGTTATACGCTGCCAAAGAACTGTACTGTGAATTTCATGGTTGCCGAAATGGGTCGGGACCCGAGTGTTTGGGACGAGCCCATAGAGTTTAAGCCTGAGAGGTTTCTGAGTGATGGAGATAATGTACAGTGTGATATAACAGGGAGTAAAGAGATTAAGATGATACCTTTTGGGGCTGGGAGGAGAATATGTCCGGGGTGGGGTTTGTCCATGCTTCTTCTGGAGTATTTGGTGGCAAATTTGATTTGGAAGTACGAGTGGAAAGCTGTGGATGAAGTTGGTGTTGATTTGACTGAGAAGCAAGAGGCCACCTGGGTGATGAAGAATCCATTGCAGGCCCATATATCTCCAAGGTTGAACAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002213 GO:0003674 GO:0003824 GO:0003993 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005840 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0006979 GO:0008134 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009625 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0022626 GO:0032991 GO:0042221 GO:0042578 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0046688 GO:0050896 GO:0051704 GO:0051707 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Acid_phosphat_B

Protein Analysis

521

Amino Acids

59.75

Weight (kDa)

6.59

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	38 - 508	8.2e-88	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002547)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g32551 FvH4_6g32560 FvH4_6g32560 FvH4_6g32570 FvH4_6g32570 FvH4_6g32570
malus_domestica	MD09G1200500.v1.1 MD09G1200900.v1.1 MD09G1201200.v1.1
prunus_persica	Prupe.3G057000_v2.0.a1 Prupe.3G057100_v2.0.a1
pyrus_communis	pycom09g11800 pycom17g19090
rosa_chinensis	RchiOBHm_Chr2g0140951 RchiOBHm_Chr2g0140961 RchiOBHm_Chr2g0140991 RchiOBHm_Chr2g0141021
rosa_laevigata	RLG00000019903 RLG00000019906 RLG00000019907 RLG00000019908
rosa_multiflora	Rmu_sc0003848.1_g000018 Rmu_sc0004769.1_g000010 Rmu_sc0004769.1_g000014
rosa_roxburghii	Rroxscaffold_2G00104300 Rroxscaffold_2G00104330 Rroxscaffold_2G00104340
rosa_rugosa	Rorug02G0365900 Rorug02G0366000 Rorug02G0366200
rosa_samantha	Rh2AG417300 Rh2AG417500 Rh2BG427400 Rh2CG403600 Rh2CG403800 Rh2DG436700 Rh2DG436900
rosa_wichuraiana	Rw2G034140 Rw2G034150 Rw2G034160 Rw2G034170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	780
AccB1I	GGYRCC	1 cut(s)	308
AccB7I	CCANNNNNTGG	2 cut(s)	295, 1159
AccIII	TCCGGA	2 cut(s)	173, 561
AciI	CCGC	6 cut(s)	113, 255, 320, 325, 388, 415
AclWI	GGATC	3 cut(s)	572, 936, 1095
AcsI	RAATTY	3 cut(s)	756, 1231, 1438
AcuI	CTGAAG	3 cut(s)	226, 364, 1076
AcvI	CACGTG	1 cut(s)	1016
AcyI	GRCGYC	3 cut(s)	309, 406, 777
AdeI	CACNNNGTG	1 cut(s)	1159
AfaI	GTAC	3 cut(s)	1225, 1326, 1454
AfiI	CCNNNNNNNGG	7 cut(s)	140, 295, 480, 481, 697, 1159, 1400
AflIII	ACRYGT	1 cut(s)	1015
AgsI	TTSAA	8 cut(s)	58, 302, 715, 910, 949, 1037, 1111, 1558
AhdI	GACNNNNNGTC	2 cut(s)	539, 967
AhlI	ACTAGT	1 cut(s)	922
AjnI	CCWGG	3 cut(s)	704, 1147, 1511
AjuI	GAANNNNNNNTTGG	2 cut(s)	282, 314
AleI	CACNNNNGTG	1 cut(s)	1514
AluBI	AGCT	4 cut(s)	170, 352, 857, 1466
AluI	AGCT	4 cut(s)	170, 352, 857, 1466
Alw26I	GTCTC	2 cut(s)	229, 413
AlwI	GGATC	3 cut(s)	572, 936, 1095
Ama87I	CYCGRG	2 cut(s)	893, 1261
Aor13HI	TCCGGA	2 cut(s)	173, 561
AoxI	GGCC	5 cut(s)	214, 394, 1150, 1506, 1536
ApeKI	GCWGC	2 cut(s)	384, 1210
ApoI	RAATTY	3 cut(s)	756, 1231, 1438
AseI	ATTAAT	1 cut(s)	872
Asp700I	GAANNNNTTC	1 cut(s)	746
AspLEI	GCGC	1 cut(s)	311
AspS9I	GGNCC	8 cut(s)	119, 215, 322, 395, 533, 701, 1258, 1537
AsuC2I	CCSGG	2 cut(s)	117, 1395
AsuHPI	GGTGA	6 cut(s)	242, 337, 490, 1132, 1133, 1528
AsuII	TTCGAA	1 cut(s)	760
AvaI	CYCGRG	2 cut(s)	893, 1261
AvaII	GGWCC	5 cut(s)	119, 322, 533, 701, 1258
BanI	GGYRCC	1 cut(s)	308
BanII	GRGCYC	1 cut(s)	1281
BbrPI	CACGTG	1 cut(s)	1016
BbsI	GAAGAC	1 cut(s)	891
BbvI	GCAGC	2 cut(s)	396, 1197
BccI	CCATC	5 cut(s)	350, 985, 1117, 1190, 1307
BceAI	ACGGC	4 cut(s)	115, 296, 322, 409
BciT130I	CCWGG	3 cut(s)	706, 1149, 1513
BcnI	CCSGG	2 cut(s)	117, 1395
BcoDI	GTCTC	2 cut(s)	229, 413
BcuI	ACTAGT	1 cut(s)	922
BfaI	CTAG	2 cut(s)	167, 923
BfoI	RGCGCY	1 cut(s)	312
BglI	GCCNNNNNGGC	1 cut(s)	393
BisI	GCNGC	3 cut(s)	385, 388, 1211
BlsI	GCNGC	3 cut(s)	386, 389, 1212
Bme1390I	CCNGG	5 cut(s)	117, 706, 1149, 1395, 1513
Bme18I	GGWCC	5 cut(s)	119, 322, 533, 701, 1258
BmeRI	GACNNNNNGTC	2 cut(s)	539, 967
BmeT110I	CYCGRG	2 cut(s)	893, 1261
BmgT120I	GGNCC	8 cut(s)	119, 215, 322, 395, 533, 701, 1258, 1537
BmiI	GGNNCC	9 cut(s)	17, 120, 121, 310, 702, 703, 1164, 1259, 1260
BmrFI	CCNGG	5 cut(s)	117, 706, 1149, 1395, 1513
BmsI	GCATC	1 cut(s)	1089
BpiI	GAAGAC	1 cut(s)	891
BpmI	CTGGAG	1 cut(s)	1442
Bpu14I	TTCGAA	1 cut(s)	760
BpuEI	CTTGAG	1 cut(s)	440
BpuMI	CCSGG	2 cut(s)	117, 1395
Bsa29I	ATCGAT	1 cut(s)	642
BsaAI	YACGTR	1 cut(s)	1016
BsaHI	GRCGYC	3 cut(s)	309, 406, 777
BsaJI	CCNNGG	7 cut(s)	294, 432, 704, 939, 1394, 1512, 1550
BsaWI	WCCGGW	2 cut(s)	173, 561
BsaXI	ACNNNNNCTCC	6 cut(s)	909, 939, 1308, 1338, 1375, 1405
Bsc4I	CCNNNNNNNGG	7 cut(s)	140, 295, 480, 481, 697, 1159, 1400
Bse118I	RCCGGY	1 cut(s)	504
Bse3DI	GCAATG	2 cut(s)	977, 1529
BseAI	TCCGGA	2 cut(s)	173, 561
BseBI	CCWGG	3 cut(s)	706, 1149, 1513
BseCI	ATCGAT	1 cut(s)	642
BseDI	CCNNGG	7 cut(s)	294, 432, 704, 939, 1394, 1512, 1550
BseGI	GGATG	4 cut(s)	27, 622, 1201, 1477
BseLI	CCNNNNNNNGG	7 cut(s)	140, 295, 480, 481, 697, 1159, 1400
BseMI	GCAATG	2 cut(s)	977, 1529
BseMII	CTCAG	3 cut(s)	1287, 1298, 1485
BseRI	GAGGAG	4 cut(s)	11, 321, 401, 1396
BseXI	GCAGC	2 cut(s)	396, 1197
BseYI	CCCAGC	2 cut(s)	336, 1376
BshFI	GGCC	5 cut(s)	216, 396, 1152, 1508, 1538
BshNI	GGYRCC	1 cut(s)	308
BshVI	ATCGAT	1 cut(s)	642
BsiHKCI	CYCGRG	2 cut(s)	893, 1261
BsiSI	CCGG	6 cut(s)	116, 174, 505, 562, 954, 1394
BslFI	GGGAC	4 cut(s)	132, 714, 1271, 1286
BslI	CCNNNNNNNGG	7 cut(s)	140, 295, 480, 481, 697, 1159, 1400
BsmAI	GTCTC	2 cut(s)	229, 413
BsmBI	CGTCTC	2 cut(s)	229, 413
BsmFI	GGGAC	4 cut(s)	132, 714, 1271, 1286
BsmI	GAATGC	1 cut(s)	905
BsnI	GGCC	5 cut(s)	216, 396, 1152, 1508, 1538
BsoBI	CYCGRG	2 cut(s)	893, 1261
Bsp119I	TTCGAA	1 cut(s)	760
Bsp1286I	GDGCHC	1 cut(s)	1281
Bsp13I	TCCGGA	2 cut(s)	173, 561
Bsp1407I	TGTACA	1 cut(s)	1324
Bsp143I	GATC	4 cut(s)	511, 564, 928, 1087
BspACI	CCGC	6 cut(s)	113, 255, 320, 325, 388, 415
BspANI	GGCC	5 cut(s)	216, 396, 1152, 1508, 1538
BspCNI	CTCAG	3 cut(s)	1288, 1299, 1486
BspDI	ATCGAT	1 cut(s)	642
BspEI	TCCGGA	2 cut(s)	173, 561
BspHI	TCATGA	1 cut(s)	849
BspLI	GGNNCC	9 cut(s)	17, 120, 121, 310, 702, 703, 1164, 1259, 1260
BspPI	GGATC	3 cut(s)	572, 936, 1095
BspT104I	TTCGAA	1 cut(s)	760
BspT107I	GGYRCC	1 cut(s)	308
BsrDI	GCAATG	2 cut(s)	977, 1529
BsrFI	RCCGGY	1 cut(s)	504
BsrGI	TGTACA	1 cut(s)	1324
BssAI	RCCGGY	1 cut(s)	504
BssECI	CCNNGG	7 cut(s)	294, 432, 704, 939, 1394, 1512, 1550
BssMI	GATC	4 cut(s)	511, 564, 928, 1087
BssNI	GRCGYC	3 cut(s)	309, 406, 777
BssT1I	CCWWGG	2 cut(s)	294, 1550
Bst2UI	CCWGG	3 cut(s)	706, 1149, 1513
Bst4CI	ACNGT	4 cut(s)	371, 1223, 1228, 1329
Bst6I	CTCTTC	2 cut(s)	29, 1032
BstACI	GRCGYC	3 cut(s)	309, 406, 777
BstAUI	TGTACA	1 cut(s)	1324
BstBAI	YACGTR	1 cut(s)	1016
BstBI	TTCGAA	1 cut(s)	760
BstC8I	GCNNGC	1 cut(s)	1536
BstDEI	CTNAG	4 cut(s)	1133, 1296, 1307, 1494
BstF5I	GGATG	4 cut(s)	27, 622, 1201, 1477
BstH2I	RGCGCY	1 cut(s)	312
BstHHI	GCGC	1 cut(s)	311
BstKTI	GATC	4 cut(s)	514, 567, 931, 1090
BstMAI	GTCTC	2 cut(s)	229, 413
BstMBI	GATC	4 cut(s)	511, 564, 928, 1087
BstMWI	GCNNNNNNNGC	2 cut(s)	317, 393
BstNI	CCWGG	3 cut(s)	706, 1149, 1513
BstSCI	CCNGG	5 cut(s)	115, 704, 1147, 1393, 1511
BstV1I	GCAGC	2 cut(s)	396, 1197
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	2 cut(s)	564, 1087
BstYI	RGATCY	2 cut(s)	564, 1087
Bsu15I	ATCGAT	1 cut(s)	642
BsuRI	GGCC	5 cut(s)	216, 396, 1152, 1508, 1538
BsuTUI	ATCGAT	1 cut(s)	642
BtsCI	GGATG	4 cut(s)	27, 622, 1201, 1477
BtsI	GCAGTG	2 cut(s)	989, 1122
BtsIMutI	CAGTG	3 cut(s)	989, 1122, 1334
Cac8I	GCNNGC	1 cut(s)	1536
CciI	TCATGA	1 cut(s)	849
CfoI	GCGC	1 cut(s)	311
Cfr10I	RCCGGY	1 cut(s)	504
Cfr13I	GGNCC	8 cut(s)	119, 215, 322, 395, 533, 701, 1258, 1537
ClaI	ATCGAT	1 cut(s)	642
CpoI	CGGWCCG	1 cut(s)	322
CseI	GACGC	2 cut(s)	395, 641
Csp6I	GTAC	3 cut(s)	1224, 1325, 1453
CspI	CGGWCCG	1 cut(s)	322
CviAII	CATG	6 cut(s)	402, 427, 850, 967, 1237, 1411
CviQI	GTAC	3 cut(s)	1224, 1325, 1453
DdeI	CTNAG	4 cut(s)	1133, 1296, 1307, 1494
DinI	GGCGCC	1 cut(s)	310
DpnI	GATC	4 cut(s)	513, 566, 930, 1089
DpnII	GATC	4 cut(s)	511, 564, 928, 1087
DraIII	CACNNNGTG	1 cut(s)	1159
DriI	GACNNNNNGTC	2 cut(s)	539, 967
Eam1104I	CTCTTC	2 cut(s)	29, 1032
Eam1105I	GACNNNNNGTC	2 cut(s)	539, 967
EarI	CTCTTC	2 cut(s)	29, 1032
EciI	GGCGGA	1 cut(s)	404
Eco130I	CCWWGG	2 cut(s)	294, 1550
Eco24I	GRGCYC	1 cut(s)	1281
Eco32I	GATATC	1 cut(s)	493
Eco47I	GGWCC	5 cut(s)	119, 322, 533, 701, 1258
Eco57I	CTGAAG	3 cut(s)	226, 364, 1076
Eco72I	CACGTG	1 cut(s)	1016
Eco88I	CYCGRG	2 cut(s)	893, 1261
EcoO109I	RGGNCCY	3 cut(s)	119, 701, 1258
EcoRII	CCWGG	3 cut(s)	704, 1147, 1511
EcoRV	GATATC	1 cut(s)	493
EcoT14I	CCWWGG	2 cut(s)	294, 1550
EcoT38I	GRGCYC	1 cut(s)	1281
EgeI	GGCGCC	1 cut(s)	310
EheI	GGCGCC	1 cut(s)	310
ErhI	CCWWGG	2 cut(s)	294, 1550
Esp3I	CGTCTC	2 cut(s)	229, 413
FaeI	CATG	6 cut(s)	405, 430, 853, 970, 1240, 1414
FaqI	GGGAC	4 cut(s)	132, 714, 1271, 1286
FatI	CATG	6 cut(s)	401, 426, 849, 966, 1236, 1410
FauI	CCCGC	1 cut(s)	262
FauNDI	CATATG	1 cut(s)	152
Fnu4HI	GCNGC	3 cut(s)	385, 388, 1211
FokI	GGATG	4 cut(s)	14, 629, 1208, 1484
FriOI	GRGCYC	1 cut(s)	1281
Fsp4HI	GCNGC	3 cut(s)	385, 388, 1211
FspBI	CTAG	2 cut(s)	167, 923
GlaI	GCGC	1 cut(s)	310
GluI	GCNGC	3 cut(s)	385, 388, 1211
GsaI	CCCAGC	2 cut(s)	340, 1380
GsuI	CTGGAG	1 cut(s)	1442
HaeII	RGCGCY	1 cut(s)	312
HaeIII	GGCC	5 cut(s)	216, 396, 1152, 1508, 1538
HapII	CCGG	6 cut(s)	116, 174, 505, 562, 954, 1394
HgaI	GACGC	2 cut(s)	395, 641
HhaI	GCGC	1 cut(s)	311
Hin1I	GRCGYC	3 cut(s)	309, 406, 777
Hin1II	CATG	6 cut(s)	405, 430, 853, 970, 1240, 1414
Hin6I	GCGC	1 cut(s)	309
HinP1I	GCGC	1 cut(s)	309
HincII	GTYRAC	1 cut(s)	196
HindII	GTYRAC	1 cut(s)	196
HinfI	GANTC	3 cut(s)	177, 742, 1525
HpaII	CCGG	6 cut(s)	116, 174, 505, 562, 954, 1394
HphI	GGTGA	6 cut(s)	242, 337, 490, 1132, 1133, 1528
Hpy166II	GTNNAC	2 cut(s)	196, 987
Hpy188I	TCNGA	7 cut(s)	143, 433, 687, 940, 1023, 1095, 1308
Hpy8I	GTNNAC	2 cut(s)	196, 987
Hpy99I	CGWCG	3 cut(s)	101, 545, 657
HpyAV	CCTTC	7 cut(s)	74, 245, 250, 456, 601, 802, 908
HpyCH4III	ACNGT	4 cut(s)	371, 1223, 1228, 1329
HpyCH4IV	ACGT	3 cut(s)	777, 1015, 1201
HpyCH4V	TGCA	3 cut(s)	982, 1102, 1534
HpyF10VI	GCNNNNNNNGC	2 cut(s)	317, 393
HpyF3I	CTNAG	4 cut(s)	1133, 1296, 1307, 1494
HpySE526I	ACGT	3 cut(s)	777, 1015, 1201
Hsp92I	GRCGYC	3 cut(s)	309, 406, 777
Hsp92II	CATG	6 cut(s)	405, 430, 853, 970, 1240, 1414
HspAI	GCGC	1 cut(s)	309
KasI	GGCGCC	1 cut(s)	308
KflI	GGGWCCC	3 cut(s)	119, 701, 1258
Kpn2I	TCCGGA	2 cut(s)	173, 561
Kzo9I	GATC	4 cut(s)	511, 564, 928, 1087
LmnI	GCTCC	2 cut(s)	789, 941
Lsp1109I	GCAGC	2 cut(s)	396, 1197
LweI	GCATC	1 cut(s)	1089
MaeI	CTAG	2 cut(s)	167, 923
MaeII	ACGT	3 cut(s)	777, 1015, 1201
MaeIII	GTNAC	1 cut(s)	973
MalI	GATC	4 cut(s)	513, 566, 930, 1089
MboI	GATC	4 cut(s)	511, 564, 928, 1087
MflI	RGATCY	2 cut(s)	564, 1087
MhlI	GDGCHC	1 cut(s)	1281
MluCI	AATT	4 cut(s)	129, 756, 1231, 1438
Mly113I	GGCGCC	1 cut(s)	309
MmeI	TCCRAC	2 cut(s)	719, 1042
MroI	TCCGGA	2 cut(s)	173, 561
MroXI	GAANNNNTTC	1 cut(s)	746
MseI	TTAA	4 cut(s)	813, 872, 1290, 1356
MslI	CAYNNNNRTG	2 cut(s)	982, 1514
MspI	CCGG	6 cut(s)	116, 174, 505, 562, 954, 1394
MspR9I	CCNGG	5 cut(s)	117, 706, 1149, 1395, 1513
Mva1269I	GAATGC	1 cut(s)	905
MvaI	CCWGG	3 cut(s)	706, 1149, 1513
MwoI	GCNNNNNNNGC	2 cut(s)	317, 393
NarI	GGCGCC	1 cut(s)	309
NciI	CCSGG	2 cut(s)	117, 1395
NdeI	CATATG	1 cut(s)	152
NdeII	GATC	4 cut(s)	511, 564, 928, 1087
NlaIII	CATG	6 cut(s)	405, 430, 853, 970, 1240, 1414
NlaIV	GGNNCC	9 cut(s)	17, 120, 121, 310, 702, 703, 1164, 1259, 1260
NmeAIII	GCCGAG	1 cut(s)	430
NspV	TTCGAA	1 cut(s)	760
OliI	CACNNNNGTG	1 cut(s)	1514
PaeR7I	CTCGAG	1 cut(s)	893
PagI	TCATGA	1 cut(s)	849
PcsI	WCGNNNNNNNCGW	2 cut(s)	516, 537
PctI	GAATGC	1 cut(s)	905
PdmI	GAANNNNTTC	1 cut(s)	746
PfeI	GAWTC	3 cut(s)	177, 742, 1525
PflMI	CCANNNNNTGG	2 cut(s)	295, 1159
PkrI	GCNGC	3 cut(s)	386, 389, 1212
PluTI	GGCGCC	1 cut(s)	312
PmaCI	CACGTG	1 cut(s)	1016
PmlI	CACGTG	1 cut(s)	1016
Ppu21I	YACGTR	1 cut(s)	1016
PpuMI	RGGWCCY	3 cut(s)	119, 701, 1258
PshBI	ATTAAT	1 cut(s)	872
Psp5II	RGGWCCY	3 cut(s)	119, 701, 1258
Psp6I	CCWGG	3 cut(s)	704, 1147, 1511
PspCI	CACGTG	1 cut(s)	1016
PspFI	CCCAGC	2 cut(s)	336, 1376
PspGI	CCWGG	3 cut(s)	704, 1147, 1511
PspN4I	GGNNCC	9 cut(s)	17, 120, 121, 310, 702, 703, 1164, 1259, 1260
PspPI	GGNCC	8 cut(s)	119, 215, 322, 395, 533, 701, 1258, 1537
PspPPI	RGGWCCY	3 cut(s)	119, 701, 1258
PsuI	RGATCY	2 cut(s)	564, 1087
RsaI	GTAC	3 cut(s)	1225, 1326, 1454
RsaNI	GTAC	3 cut(s)	1224, 1325, 1453
RseI	CAYNNNNRTG	2 cut(s)	982, 1514
Rsr2I	CGGWCCG	1 cut(s)	322
RsrII	CGGWCCG	1 cut(s)	322
SaqAI	TTAA	4 cut(s)	813, 872, 1290, 1356
SatI	GCNGC	3 cut(s)	385, 388, 1211
Sau3AI	GATC	4 cut(s)	511, 564, 928, 1087
Sau96I	GGNCC	8 cut(s)	119, 215, 322, 395, 533, 701, 1258, 1537
ScrFI	CCNGG	5 cut(s)	117, 706, 1149, 1395, 1513
SduI	GDGCHC	1 cut(s)	1281
SfaNI	GCATC	1 cut(s)	1089
SfoI	GGCGCC	1 cut(s)	310
Sfr274I	CTCGAG	1 cut(s)	893
SfuI	TTCGAA	1 cut(s)	760
SinI	GGWCC	5 cut(s)	119, 322, 533, 701, 1258
SlaI	CTCGAG	1 cut(s)	893
SmiMI	CAYNNNNRTG	2 cut(s)	982, 1514
SmlI	CTYRAG	2 cut(s)	455, 893
SmoI	CTYRAG	2 cut(s)	455, 893
SpeI	ACTAGT	1 cut(s)	922
Sse9I	AATT	4 cut(s)	129, 756, 1231, 1438
SsiI	CCGC	6 cut(s)	113, 255, 320, 325, 388, 415
SspDI	GGCGCC	1 cut(s)	308
SspMI	CTAG	2 cut(s)	167, 923
StyD4I	CCNGG	5 cut(s)	115, 704, 1147, 1393, 1511
StyI	CCWWGG	2 cut(s)	294, 1550
TaaI	ACNGT	4 cut(s)	371, 1223, 1228, 1329
TaiI	ACGT	3 cut(s)	780, 1018, 1204
TaqI	TCGA	7 cut(s)	96, 180, 510, 543, 642, 760, 894
TasI	AATT	4 cut(s)	129, 756, 1231, 1438
TatI	WGTACW	2 cut(s)	1223, 1324
TauI	GCSGC	1 cut(s)	390
TfiI	GAWTC	3 cut(s)	177, 742, 1525
Tru1I	TTAA	4 cut(s)	813, 872, 1290, 1356
Tru9I	TTAA	4 cut(s)	813, 872, 1290, 1356
TscAI	CASTG	3 cut(s)	989, 1122, 1334
TseI	GCWGC	2 cut(s)	384, 1210
TspGWI	ACGGA	5 cut(s)	508, 546, 719, 817, 974
TspRI	CASTG	3 cut(s)	989, 1122, 1334
Van91I	CCANNNNNTGG	2 cut(s)	295, 1159
VpaK11BI	GGWCC	5 cut(s)	119, 322, 533, 701, 1258
VspI	ATTAAT	1 cut(s)	872
XapI	RAATTY	3 cut(s)	756, 1231, 1438
XcmI	CCANNNNNNNNNTGG	2 cut(s)	209, 1417
XhoI	CTCGAG	1 cut(s)	893
XmnI	GAANNNNTTC	1 cut(s)	746
XspI	CTAG	2 cut(s)	167, 923
ZraI	GACGTC	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.