Rorug02G0643200

Predicted membrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0004430
Physical Location & Seq
Forward (+)
75455366 .. 75459706
4341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0643200.1

Sequence Viewer

Length: 2004 bp
ATGGCGGGAAAGGAGGAACCGAACTCCGGCGAAGAGGTCTGCTGGAGAAAGCAAGTCGGCGATAAACTAAACCGCCTTCAGTCCCTTCTCTTCGGAGCCGAACTCGCCGCCGAGAGAAACGACTTCTCCTCCGCTCAGATATTCTCTCTTCGTCTTCTCGGCTTTCTCGACTCACAGTCTCACTCTCAGCTCGACCGCGCTTTCGTCAGCCCTATTCGCCGCGAAGCCGTCTCCAAGCTCGGAGAGGCCCGCCGTGCCCTCACTTCTGATTCCGATCGCAAAGCTTTCGAGCAAGCGAAAAAAGATCCTGGTTTTGTTTTCCGCACAAAGGGAGATATTGACATTGGGAGGATTAAACAGTCAAAGTACTTTCAGGCTCTTCTTCAGCAGCCTAACAATGGAAAGGTTGTGAATGATTTGGGAGATCAACTGGAGAGGCGGGACAAATTGGCTAGCAAGTTATCAAAAGCTATGACACAAACTAAGTTGACATCATTGTACAAAAACAACATTGGGACGGCAAGTAAGGACACATCCCGTAGTTCTTGGGCTCCTAAAAGTAACAGCTCTGAGGACTGCACTATTGTGGAAAAGCGTCACTCTCATCACAACCGTAACAGCAGTCATAGTACCTCATCTTTTCAAAAAGTTGAAGAGGAAGAAAGAGCTCATGGGTATCCCTTAGGCCCTAAACGTGTACACAGGGAATTTAATAGCCCCATTATTGATAATATGAAGTCCCCATCAGCCAATGAAGATGCTAAAGCCGATGTTTCTGGCAATGGATTTGTAACTGCCAAAGCCAAATTGGAAATGGATGTAAGGCAAAGGCGAGGGTTAGCTGCATCATCAAATGCTTCTGTCTCTCCTCAAAGTGATAACAGTGTTGCTAATAGGGGTTTTAGCACGAGATCATATGGTGTTTCACGTCGAGGTGTCCGCGGTAATTTTATTCCTCCCGTCAGATCTAATGGGGGCAATGTTGGGAATATGACTTCAAAAATTGGTGGAAAGTCGGATGATGCATTAGATGACTCAACTAGGAGCTGTATGGAAATGCTCTGCGGTCCTGATGGGGAGCTCCCAGAAAAATTAAGGAACTTGGAACCTCGTCTTATTGAACATGTCAGTAATGAGATTATGGACAAGGATCCAAATGTTCGATGGAATGATATTGCTGGCTTGGATCATGCTAAAAAGTGTGTGACGGAGATGGTTATATGGCCCCTGTTACGTCCCGACATTTTCAAAGGATGTCGTTCTCCTGGAAAGGGTCTTCTTCTCTTCGGTCCACCAGGAACAGGCAAAACAATGATTGGGAAAGCCATAGCTGGAGAGGCAAAAGCAACATTCTTCTACATCTCTGCCAGTTCATTGACGAGCAAATGGATTGGTGAGGGTGAAAAGTTAGTTCGGGCCCTTTTTGGAGTAGCCAGTTGTCGGCAGCCAGCTGTAATTTTTGTTGACGAAATCGACTCACTTCTCTCACAGCGTAAGTCAGAAGGTGAACATGAATCAAGTAGGCGACTCAAAACACAGTTTCTTATTGAAATGGAAGGCTTTGACAGTGGCAGTGAGCAAATTCTTCTAATAGGAGCAACAAATCGACCCCAAGAGCTTGATGAAGCAGCACGTAGGCGACTTACTAAGAGACTTTACATTCCGCTGCCTGCATCAGAAGCAAGAGCCTGGATAGTGGAGAATCTGCTGGAGAAGGATGGTCTATTCAAACTTTCAAGGGAAGATATTGATAACATATGCAAATTAACAGAAGGGTACTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCCTCTATGGGTCCTCTAAGAGAAGCTCTGAGACAAGGCATAGAAATAACAAATCTTAAGAAGGAGGATATGCGCCCGGTAACTTTTCAGGATTTTGAGAGTGCATTACATGAGGTGAGGCCCTCTGTTTCCTTGAATGAGCTTGGTACCTATGATGATTGGAACAAGCAATTTGGAAGTTTGTCCCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tmemb_40

Protein Analysis

667

Amino Acids

74.05

Weight (kDa)

8.92

Isoelectric Point (pI)

50.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FIGL1_N PF24347 12 - 86 6.1e-35 FIGL1 N-terminal domain
AAA PF00004 426 - 556 2.5e-39 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 581 - 623 4.2e-10 AAA+ lid domain
Vps4_C PF09336 629 - 663 3.4e-07 Vps4 C terminal oligomerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1958
AccB1I GGYRCC 1 cut(s) 1958
AccBSI CCGCTC 1 cut(s) 134
AccII CGCG 3 cut(s) 198, 222, 942
AclWI GGATC 5 cut(s) 299, 1145, 1158, 1194, 1792
AcsI RAATTY 2 cut(s) 707, 1581
AcuI CTGAAG 2 cut(s) 62, 368
AfaI GTAC 6 cut(s) 368, 500, 631, 699, 1778, 1960
AfiI CCNNNNNNNGG 6 cut(s) 26, 328, 398, 1271, 1301, 1440
AflII CTTAAG 1 cut(s) 1868
AflIII ACRYGT 2 cut(s) 694, 1123
AgsI TTSAA 9 cut(s) 644, 653, 999, 1121, 1249, 1550, 1729, 1737, 1948
AhdI GACNNNNNGTC 1 cut(s) 175
AjiI CACGTC 1 cut(s) 929
AjnI CCWGG 4 cut(s) 307, 1264, 1294, 1688
AleI CACNNNNGTG 1 cut(s) 584
Alw21I GWGCWC 2 cut(s) 670, 1083
Alw26I GTCTC 5 cut(s) 183, 235, 868, 1645, 1837
AlwI GGATC 5 cut(s) 299, 1145, 1158, 1194, 1792
AoxI GGCC 5 cut(s) 246, 685, 1223, 1416, 1931
ApaI GGGCCC 1 cut(s) 1420
ApeKI GCWGC 5 cut(s) 388, 842, 1444, 1628, 1666
ApoI RAATTY 2 cut(s) 707, 1581
ArsI GACNNNNNNTTYG 2 cut(s) 185, 217
Asp718I GGTACC 1 cut(s) 1958
AspLEI GCGC 2 cut(s) 200, 1887
AspS9I GGNCC 9 cut(s) 247, 686, 1067, 1224, 1289, 1416, 1417, 1823, 1932
AsuC2I CCSGG 1 cut(s) 1889
AsuHPI GGTGA 4 cut(s) 1406, 1412, 1517, 1939
AsuNHI GCTAGC 1 cut(s) 452
AvaII GGWCC 3 cut(s) 1067, 1289, 1823
AxyI CCTNAGG 1 cut(s) 682
BaeGI GKGCMC 2 cut(s) 259, 1420
BamHI GGATCC 1 cut(s) 1150
BanI GGYRCC 1 cut(s) 1958
BanII GRGCYC 4 cut(s) 553, 670, 1083, 1420
BauI CACGAG 1 cut(s) 907
BbsI GAAGAC 2 cut(s) 146, 1268
Bbv12I GWGCWC 2 cut(s) 670, 1083
BbvI GCAGC 5 cut(s) 400, 829, 1456, 1640, 1653
BccI CCATC 5 cut(s) 751, 1067, 1158, 1207, 1712
BceAI ACGGC 3 cut(s) 212, 237, 534
BcgI CGANNNNNNTGC 2 cut(s) 268, 302
BciT130I CCWGG 4 cut(s) 309, 1266, 1296, 1690
BciVI GTATCC 1 cut(s) 687
BcnI CCSGG 1 cut(s) 1889
BcoDI GTCTC 5 cut(s) 183, 235, 868, 1645, 1837
BfaI CTAG 2 cut(s) 453, 1041
BfrI CTTAAG 1 cut(s) 1868
BfuI GTATCC 1 cut(s) 687
BglII AGATCT 1 cut(s) 965
BisI GCNGC 7 cut(s) 108, 220, 389, 843, 1445, 1629, 1667
BlsI GCNGC 7 cut(s) 109, 221, 390, 844, 1446, 1630, 1668
BmcAI AGTACT 1 cut(s) 368
Bme1390I CCNGG 5 cut(s) 309, 1266, 1296, 1690, 1889
Bme18I GGWCC 3 cut(s) 1067, 1289, 1823
BmeRI GACNNNNNGTC 1 cut(s) 175
BmgBI CACGTC 1 cut(s) 929
BmgT120I GGNCC 9 cut(s) 247, 686, 1067, 1224, 1289, 1416, 1417, 1823, 1932
BmiI GGNNCC 9 cut(s) 18, 97, 552, 1107, 1152, 1226, 1418, 1824, 1960
BmrFI CCNGG 5 cut(s) 309, 1266, 1296, 1690, 1889
BmsI GCATC 5 cut(s) 748, 854, 1012, 1682, 1801
BmtI GCTAGC 1 cut(s) 456
BpiI GAAGAC 2 cut(s) 146, 1268
BplI GAGNNNNNCTC 2 cut(s) 87, 119
BpmI CTGGAG 4 cut(s) 64, 452, 1353, 1730
BpuMI CCSGG 1 cut(s) 1889
BsaAI YACGTR 1 cut(s) 1634
BsaBI GATNNNNATC 1 cut(s) 273
BsaJI CCNNGG 1 cut(s) 940
BsaXI ACNNNNNCTCC 4 cut(s) 110, 113, 140, 143
Bsc4I CCNNNNNNNGG 6 cut(s) 26, 328, 398, 1271, 1301, 1440
Bse1I ACTGG 3 cut(s) 435, 1368, 1434
Bse21I CCTNAGG 1 cut(s) 682
Bse3DI GCAATG 2 cut(s) 787, 985
Bse8I GATNNNNATC 1 cut(s) 273
BseBI CCWGG 4 cut(s) 309, 1266, 1296, 1690
BseDI CCNNGG 1 cut(s) 940
BseGI GGATG 6 cut(s) 533, 823, 1024, 1259, 1723, 1816
BseJI GATNNNNATC 1 cut(s) 273
BseLI CCNNNNNNNGG 6 cut(s) 26, 328, 398, 1271, 1301, 1440
BseMI GCAATG 2 cut(s) 787, 985
BseMII CTCAG 5 cut(s) 149, 200, 561, 1794, 1832
BseNI ACTGG 3 cut(s) 435, 1368, 1434
BseRI GAGGAG 2 cut(s) 118, 858
BseSI GKGCMC 2 cut(s) 259, 1420
BseXI GCAGC 5 cut(s) 400, 829, 1456, 1640, 1653
BsgI GTGCAG 1 cut(s) 562
Bsh1236I CGCG 3 cut(s) 198, 222, 942
Bsh1285I CGRYCG 2 cut(s) 196, 277
BshFI GGCC 5 cut(s) 248, 687, 1225, 1418, 1933
BshNI GGYRCC 1 cut(s) 1958
BsiEI CGRYCG 2 cut(s) 196, 277
BsiHKAI GWGCWC 2 cut(s) 670, 1083
BsiSI CCGG 2 cut(s) 27, 1889
BslFI GGGAC 6 cut(s) 67, 455, 529, 724, 1221, 1981
BslI CCNNNNNNNGG 6 cut(s) 26, 328, 398, 1271, 1301, 1440
BsmAI GTCTC 5 cut(s) 183, 235, 868, 1645, 1837
BsmBI CGTCTC 1 cut(s) 235
BsmFI GGGAC 6 cut(s) 67, 455, 529, 724, 1221, 1981
BsnI GGCC 5 cut(s) 248, 687, 1225, 1418, 1933
Bsp120I GGGCCC 1 cut(s) 1416
Bsp1286I GDGCHC 5 cut(s) 259, 553, 670, 1083, 1420
Bsp1407I TGTACA 2 cut(s) 498, 697
Bsp143I GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
BspANI GGCC 5 cut(s) 248, 687, 1225, 1418, 1933
BspCNI CTCAG 5 cut(s) 148, 199, 562, 1793, 1833
BspFNI CGCG 3 cut(s) 198, 222, 942
BspLI GGNNCC 9 cut(s) 18, 97, 552, 1107, 1152, 1226, 1418, 1824, 1960
BspOI GCTAGC 1 cut(s) 456
BspPI GGATC 5 cut(s) 299, 1145, 1158, 1194, 1792
BspQI GCTCTTC 1 cut(s) 384
BspT107I GGYRCC 1 cut(s) 1958
BspTI CTTAAG 1 cut(s) 1868
BsrBI CCGCTC 1 cut(s) 134
BsrDI GCAATG 2 cut(s) 787, 985
BsrGI TGTACA 2 cut(s) 498, 697
BsrI ACTGG 3 cut(s) 435, 1368, 1434
BssECI CCNNGG 1 cut(s) 940
BssMI GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
BssSI CACGAG 1 cut(s) 907
Bst2BI CACGAG 1 cut(s) 907
Bst2UI CCWGG 4 cut(s) 309, 1266, 1296, 1690
Bst4CI ACNGT 6 cut(s) 177, 360, 614, 884, 1539, 1568
Bst6I CTCTTC 6 cut(s) 27, 95, 153, 384, 648, 1289
BstAFI CTTAAG 1 cut(s) 1868
BstAUI TGTACA 2 cut(s) 498, 697
BstBAI YACGTR 1 cut(s) 1634
BstC8I GCNNGC 6 cut(s) 250, 294, 454, 1180, 1449, 1671
BstDSI CCRYGG 1 cut(s) 940
BstF5I GGATG 6 cut(s) 533, 823, 1024, 1259, 1723, 1816
BstFNI CGCG 3 cut(s) 198, 222, 942
BstHHI GCGC 2 cut(s) 200, 1887
BstKTI GATC 8 cut(s) 277, 307, 427, 914, 968, 1153, 1189, 1787
BstMAI GTCTC 5 cut(s) 183, 235, 868, 1645, 1837
BstMBI GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
BstMCI CGRYCG 2 cut(s) 196, 277
BstMWI GCNNNNNNNGC 5 cut(s) 104, 216, 254, 1337, 1679
BstNI CCWGG 4 cut(s) 309, 1266, 1296, 1690
BstNSI RCATGY 1 cut(s) 1127
BstSCI CCNGG 5 cut(s) 307, 1264, 1294, 1688, 1887
BstSLI GKGCMC 2 cut(s) 259, 1420
BstUI CGCG 3 cut(s) 198, 222, 942
BstV1I GCAGC 5 cut(s) 400, 829, 1456, 1640, 1653
BstV2I GAAGAC 2 cut(s) 146, 1268
BstX2I RGATCY 3 cut(s) 304, 965, 1150
BstYI RGATCY 3 cut(s) 304, 965, 1150
Bsu36I CCTNAGG 1 cut(s) 682
BsuI GTATCC 1 cut(s) 687
BsuRI GGCC 5 cut(s) 248, 687, 1225, 1418, 1933
BtgI CCRYGG 1 cut(s) 940
BtrI CACGTC 1 cut(s) 929
BtsCI GGATG 6 cut(s) 533, 823, 1024, 1259, 1723, 1816
BtsI GCAGTG 1 cut(s) 1579
BtsIMutI CAGTG 3 cut(s) 889, 1573, 1579
Cac8I GCNNGC 6 cut(s) 250, 294, 454, 1180, 1449, 1671
CfoI GCGC 2 cut(s) 200, 1887
Cfr13I GGNCC 9 cut(s) 247, 686, 1067, 1224, 1289, 1416, 1417, 1823, 1932
Cfr42I CCGCGG 1 cut(s) 943
CseI GACGC 1 cut(s) 584
Csp6I GTAC 6 cut(s) 367, 499, 630, 698, 1777, 1959
CviAII CATG 6 cut(s) 671, 1124, 1190, 1511, 1792, 1922
CviQI GTAC 6 cut(s) 367, 499, 630, 698, 1777, 1959
DpnI GATC 8 cut(s) 276, 306, 426, 913, 967, 1152, 1188, 1786
DpnII GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
DriI GACNNNNNGTC 1 cut(s) 175
Eam1104I CTCTTC 6 cut(s) 27, 95, 153, 384, 648, 1289
Eam1105I GACNNNNNGTC 1 cut(s) 175
EarI CTCTTC 6 cut(s) 27, 95, 153, 384, 648, 1289
Ecl136II GAGCTC 2 cut(s) 668, 1081
Eco24I GRGCYC 4 cut(s) 553, 670, 1083, 1420
Eco47I GGWCC 3 cut(s) 1067, 1289, 1823
Eco53kI GAGCTC 2 cut(s) 668, 1081
Eco57I CTGAAG 2 cut(s) 62, 368
Eco81I CCTNAGG 1 cut(s) 682
EcoICRI GAGCTC 2 cut(s) 668, 1081
EcoO109I RGGNCCY 4 cut(s) 686, 1417, 1823, 1932
EcoRII CCWGG 4 cut(s) 307, 1264, 1294, 1688
EcoT22I ATGCAT 1 cut(s) 1027
EcoT38I GRGCYC 4 cut(s) 553, 670, 1083, 1420
Esp3I CGTCTC 1 cut(s) 235
FaeI CATG 6 cut(s) 674, 1127, 1193, 1514, 1795, 1925
FaqI GGGAC 6 cut(s) 67, 455, 529, 724, 1221, 1981
FatI CATG 6 cut(s) 670, 1123, 1189, 1510, 1791, 1921
FauI CCCGC 2 cut(s) 257, 432
FauNDI CATATG 2 cut(s) 916, 1757
Fnu4HI GCNGC 7 cut(s) 108, 220, 389, 843, 1445, 1629, 1667
FokI GGATG 6 cut(s) 520, 830, 1031, 1266, 1730, 1823
FriOI GRGCYC 4 cut(s) 553, 670, 1083, 1420
Fsp4HI GCNGC 7 cut(s) 108, 220, 389, 843, 1445, 1629, 1667
FspBI CTAG 2 cut(s) 453, 1041
GlaI GCGC 2 cut(s) 199, 1886
GluI GCNGC 7 cut(s) 108, 220, 389, 843, 1445, 1629, 1667
GsuI CTGGAG 4 cut(s) 64, 452, 1353, 1730
HaeIII GGCC 5 cut(s) 248, 687, 1225, 1418, 1933
HapII CCGG 2 cut(s) 27, 1889
HgaI GACGC 1 cut(s) 584
HhaI GCGC 2 cut(s) 200, 1887
Hin1II CATG 6 cut(s) 674, 1127, 1193, 1514, 1795, 1925
Hin6I GCGC 2 cut(s) 198, 1885
HinP1I GCGC 2 cut(s) 198, 1885
HincII GTYRAC 2 cut(s) 489, 1465
HindII GTYRAC 2 cut(s) 489, 1465
HindIII AAGCTT 1 cut(s) 282
HinfI GANTC 7 cut(s) 170, 269, 1034, 1475, 1514, 1527, 1702
HpaII CCGG 2 cut(s) 27, 1889
HphI GGTGA 4 cut(s) 1406, 1412, 1517, 1939
Hpy166II GTNNAC 6 cut(s) 489, 698, 700, 1292, 1465, 1508
Hpy188III TCNNGA 5 cut(s) 167, 1070, 1238, 1782, 1901
Hpy8I GTNNAC 6 cut(s) 489, 698, 700, 1292, 1465, 1508
Hpy99I CGWCG 1 cut(s) 933
HpyAV CCTTC 8 cut(s) 86, 95, 1496, 1550, 1708, 1766, 1801, 1867
HpyCH4III ACNGT 6 cut(s) 177, 360, 614, 884, 1539, 1568
HpyCH4IV ACGT 4 cut(s) 694, 928, 1234, 1633
HpyCH4V TGCA 6 cut(s) 579, 845, 1025, 1673, 1761, 1916
HpyF10VI GCNNNNNNNGC 5 cut(s) 104, 216, 254, 1337, 1679
HpySE526I ACGT 4 cut(s) 694, 928, 1234, 1633
Hsp92II CATG 6 cut(s) 674, 1127, 1193, 1514, 1795, 1925
HspAI GCGC 2 cut(s) 198, 1885
KpnI GGTACC 1 cut(s) 1962
KspI CCGCGG 1 cut(s) 943
Kzo9I GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
LguI GCTCTTC 1 cut(s) 384
LmnI GCTCC 6 cut(s) 95, 556, 1044, 1078, 1086, 1595
Lsp1109I GCAGC 5 cut(s) 400, 829, 1456, 1640, 1653
LweI GCATC 5 cut(s) 748, 854, 1012, 1682, 1801
MaeI CTAG 2 cut(s) 453, 1041
MaeII ACGT 4 cut(s) 694, 928, 1234, 1633
MaeIII GTNAC 7 cut(s) 560, 596, 614, 790, 1204, 1230, 1891
MalI GATC 8 cut(s) 276, 306, 426, 913, 967, 1152, 1188, 1786
MbiI CCGCTC 1 cut(s) 134
MboI GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
MflI RGATCY 3 cut(s) 304, 965, 1150
MhlI GDGCHC 5 cut(s) 259, 553, 670, 1083, 1420
MlyI GAGTC 4 cut(s) 164, 1028, 1469, 1521
MmeI TCCRAC 1 cut(s) 996
Mph1103I ATGCAT 1 cut(s) 1027
MseI TTAA 5 cut(s) 354, 711, 1094, 1766, 1869
MslI CAYNNNNRTG 1 cut(s) 584
MspA1I CMGCKG 3 cut(s) 942, 1451, 1666
MspCI CTTAAG 1 cut(s) 1868
MspI CCGG 2 cut(s) 27, 1889
MspR9I CCNGG 5 cut(s) 309, 1266, 1296, 1690, 1889
MvaI CCWGG 4 cut(s) 309, 1266, 1296, 1690
MvnI CGCG 3 cut(s) 198, 222, 942
MwoI GCNNNNNNNGC 5 cut(s) 104, 216, 254, 1337, 1679
NciI CCSGG 1 cut(s) 1889
NdeI CATATG 2 cut(s) 916, 1757
NdeII GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
NheI GCTAGC 1 cut(s) 452
NlaIII CATG 6 cut(s) 674, 1127, 1193, 1514, 1795, 1925
NlaIV GGNNCC 9 cut(s) 18, 97, 552, 1107, 1152, 1226, 1418, 1824, 1960
NmeAIII GCCGAG 2 cut(s) 136, 138
NmuCI GTSAC 2 cut(s) 596, 1204
NsiI ATGCAT 1 cut(s) 1027
NspI RCATGY 1 cut(s) 1127
OliI CACNNNNGTG 1 cut(s) 584
PciI ACATGT 1 cut(s) 1123
PciSI GCTCTTC 1 cut(s) 384
PcsI WCGNNNNNNNCGW 1 cut(s) 165
PfeI GAWTC 3 cut(s) 269, 1514, 1702
PfoI TCCNGGA 1 cut(s) 1264
PkrI GCNGC 7 cut(s) 109, 221, 390, 844, 1446, 1630, 1668
Ple19I CGATCG 1 cut(s) 277
PleI GAGTC 4 cut(s) 164, 1028, 1469, 1521
PpsI GAGTC 4 cut(s) 164, 1028, 1469, 1521
Ppu21I YACGTR 1 cut(s) 1634
PpuMI RGGWCCY 1 cut(s) 1823
PscI ACATGT 1 cut(s) 1123
Psp124BI GAGCTC 2 cut(s) 670, 1083
Psp5II RGGWCCY 1 cut(s) 1823
Psp6I CCWGG 4 cut(s) 307, 1264, 1294, 1688
PspGI CCWGG 4 cut(s) 307, 1264, 1294, 1688
PspN4I GGNNCC 9 cut(s) 18, 97, 552, 1107, 1152, 1226, 1418, 1824, 1960
PspOMI GGGCCC 1 cut(s) 1416
PspPI GGNCC 9 cut(s) 247, 686, 1067, 1224, 1289, 1416, 1417, 1823, 1932
PspPPI RGGWCCY 1 cut(s) 1823
PsuI RGATCY 3 cut(s) 304, 965, 1150
PvuI CGATCG 1 cut(s) 277
PvuII CAGCTG 1 cut(s) 1451
RsaI GTAC 6 cut(s) 368, 500, 631, 699, 1778, 1960
RsaNI GTAC 6 cut(s) 367, 499, 630, 698, 1777, 1959
RseI CAYNNNNRTG 1 cut(s) 584
SacI GAGCTC 2 cut(s) 670, 1083
SacII CCGCGG 1 cut(s) 943
SapI GCTCTTC 1 cut(s) 384
SaqAI TTAA 5 cut(s) 354, 711, 1094, 1766, 1869
SatI GCNGC 7 cut(s) 108, 220, 389, 843, 1445, 1629, 1667
Sau3AI GATC 8 cut(s) 274, 304, 424, 911, 965, 1150, 1186, 1784
Sau96I GGNCC 9 cut(s) 247, 686, 1067, 1224, 1289, 1416, 1417, 1823, 1932
ScaI AGTACT 1 cut(s) 368
SchI GAGTC 4 cut(s) 164, 1028, 1469, 1521
ScrFI CCNGG 5 cut(s) 309, 1266, 1296, 1690, 1889
SduI GDGCHC 5 cut(s) 259, 553, 670, 1083, 1420
SfaNI GCATC 5 cut(s) 748, 854, 1012, 1682, 1801
Sfr303I CCGCGG 1 cut(s) 943
SgrBI CCGCGG 1 cut(s) 943
SinI GGWCC 3 cut(s) 1067, 1289, 1823
SmiMI CAYNNNNRTG 1 cut(s) 584
SmlI CTYRAG 1 cut(s) 1868
SmoI CTYRAG 1 cut(s) 1868
SspMI CTAG 2 cut(s) 453, 1041
SstI GAGCTC 2 cut(s) 670, 1083
StyD4I CCNGG 5 cut(s) 307, 1264, 1294, 1688, 1887
TaaI ACNGT 6 cut(s) 177, 360, 614, 884, 1539, 1568
TaiI ACGT 4 cut(s) 697, 931, 1237, 1636
TaqI TCGA 7 cut(s) 168, 192, 288, 931, 1162, 1473, 1606
TaqII GACCGA 1 cut(s) 1277
TatI WGTACW 3 cut(s) 366, 498, 697
TauI GCSGC 2 cut(s) 110, 222
TfiI GAWTC 3 cut(s) 269, 1514, 1702
Tru1I TTAA 5 cut(s) 354, 711, 1094, 1766, 1869
Tru9I TTAA 5 cut(s) 354, 711, 1094, 1766, 1869
TscAI CASTG 3 cut(s) 889, 1573, 1579
TseFI GTSAC 2 cut(s) 596, 1204
TseI GCWGC 5 cut(s) 388, 842, 1444, 1628, 1666
Tsp45I GTSAC 2 cut(s) 596, 1204
TspDTI ATGAA 6 cut(s) 749, 768, 1362, 1527, 1638, 1808
TspGWI ACGGA 1 cut(s) 1223
TspRI CASTG 3 cut(s) 889, 1573, 1579
Vha464I CTTAAG 1 cut(s) 1868
VpaK11BI GGWCC 3 cut(s) 1067, 1289, 1823
XapI RAATTY 2 cut(s) 707, 1581
XceI RCATGY 1 cut(s) 1127
XcmI CCANNNNNNNNNTGG 3 cut(s) 805, 811, 1161
XspI CTAG 2 cut(s) 453, 1041
ZrmI AGTACT 1 cut(s) 368
Zsp2I ATGCAT 1 cut(s) 1027
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.