Rorug03G0029300

ABC transporter C family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0005551
Physical Location & Seq
Forward (+)
2350577 .. 2359790
9214 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0029300.1

Sequence Viewer

Length: 5460 bp
ATGGCGTCGGAGCTAGGGCAACAGACGGTGGACCTCTCCACGGTGGTGAACCGCGCCGCGGAGGAGTCGTTCCTCTCTTTAAAGGAGCTCATGGAGAAATCGAAGGCGGCGGCGCCGGAGCTCTCCGATACCGATAAGAAAATAGGGCTGCTCAAGTACTTGGTCAAGACCCAGCAACGCATGCTCCGGCTCAATGTCCTCGCCAAGTGGTGCCAGCAGGTCCCATTGATACAATATTGTCAGCAACTTACTTCTACGTTGTCAAGTCATGATACCTGTTTTACTCAAGCAGCAGATTCATTGTTTTTCATGCATGAAGGTCTGCAACAAGCTTGTGCTCCTGTTTATGATGTTCCATCTGCAGTTGAAATCCTCCTATCAGGATCATATCAGCGGTTACCAAAATGTATAGAAGATGTGGGTCTTCAGAGTTCACTAAGTGAGGATGAGCAGAAGCCGGCTTTGAAAAAACTGGACATGCTTGTGCGGAGACAATTACTAGAAGTGTCGATCCCAAAAGAAATAAGCGAGGTTAAAGTCTCTGATGGTACAGCACTGCTTCGTGTAAATGGGGAATTCAAGGTTTTAATTACTCTTGGCTACCGAGGGCACCTATCAATGTGGAGGATACTGCACTTGGAGCTGCTTGTTGGCGAGAGAAGTGGACTTATAAAGCTAGAAGTATCTCAGCGGTATACTCTTGGGGATGATTTAGAGCGCAGAATGGCTGCTGCAGAAAATCCATTCAAGACATTGTACTCTTTTCTACATGAGATGTGTGTTAAACTTGTCATAGACACTGTCCTAAGGCAAGTACAGGCTCTTCGCCAGGGGAGATGGAAGGATGCAATCCGATTTGAGGTCCTATCTGATGGGAGCACCAGTCATGCAGGGACTTCTGGCTCTGCGCAATTAAATCAAGATGGAGAAACTGAAACATCTGGTTTACGAACGCCAGGGTTAAAAATTGTATACTGGTTAGATTTCGATAAAAACAGTGGTATTTCTGATTCATCATTATGTCCGTCTATAAAAATTGATCCAGGACCAGATCTACTGATAAAATGTGTTCATAGCACATTTGTAATAGATCCATTAACTGGAAAGGAGGCAGAATTCTCTCTTGACCAAAGTTGTATTGATGTTGAGAAATTGCTTCTGAGAGCCATATGCTGTAATAGATATACTCGTCTTCTCGAAATTCAGAAAGAGCTGGAGAAAAACGTTCAAATCTGTCGAGGTTCAGGGGATGTTGCTTTTCAGTCCTGTGTGGAAGAAGCGGACAGTGACCATAAAAAGAAAGATTTTAAGTCAGATGTCAGAGAATATGAAGGGCACGAAGTATTACGTGTGCGTGCCTATGGGTCATCATTTTTTACTCTGGGAATAAATATAAGGAATGGCCGCTTTCGTCTTCAGTCCTCCCGGAATATTCTTGCTTCTTCTGCATTTTTGTCTGAATGTGAAGATGCTTTAAATCAGGGAACTATGACTGCAGCCGAAGTTTTCATTAGCTTGAGAAGCAAAAGTATTTTGCACTTATTTGCATCTATTGGAAGGTTTTTAGGCCTTGAGGTATATGAAAATGGTTTACCTGCAGTTAAATTACCAAAGAACATTTTGAATGGCTCAACTATGTTGCTAATGGGATTTCCAGATTGTGGGAGCTCTTATTTTTTGCTGATGCAGCTTGATAAGGATTTCAAACCCCTTTTTAAATTGCTTGAGACTCAGCCCGATTCTTCTGGAAAAGCTGATTCTCTCAATGACCAAAATCATGTGATACGGATCAAGAAAATTGATGTTAACCAGATGCAGATGCATGAAGATGATATGAATTTAAGCTTGCTTGACTGGGGAAAACTACAATCCATATTGCCTAGCGCTGGTAGATCTAATCAGTCATCTGAAAATGGTCTTCTTACGGATATCAGCCTCGAGGGTTCTATGCCAATTGCAGGGTGTCCACCATCGAGTTTTTCTTCTGTGGTTGATGAAGTGTTTGAACTGGAGAAAGGGTTATCTGCACCTTCCTTCTCTCTTCAAAATGGAACTTCATCATTCAACACATCTTCTGCCTCTCATTTTGGCTCTGCTCCAATGAATCTTCATTCCATAAAAGCTGGAAGTCCAGCTTCCAAATGGGAGGGAGGTATGCAGATGTCGCAGTTAAACAGTGCTGCGAATGTTTCTGGTATGGCATCCCATTATAATGGATCCTTGTATTCATCAAGTAACGTGAAGGGCACCATACAGTCTTCTTCTCTCAGTTCTCTGTCTTCTGCTACTGGAAGGAGTGTCTCTGTGAAGAAAATGTCTGTTTCAAAGTCTGATCAGGATTTGGCTTCGCTTAGGTCTCCCCAGTTAGTAGATTATGGTTCTACTTCAATGGATGAAGATCACCTGAGATTTATGAGTGATACTTCAAAGGGTGCAACATATGGATTTAGATCTTCTCGCCTATTATCTCCACCTGGTCCCAGTGGCCCCCGAATATCCGGGCCAGGCATGAGACCTGTAACTGGATCTTTCAGAGTCGCTGGTTCAAACTCATGTGTAACAACTCCTGCAACCCATGCACCTGATTCTGGAGTCTGCGATGGCCCTAATCATGATGATTCAAATCATGATAGAAAACTTCGAAAGCGTACACTTTCAGAAATGTTGGATCTGATCCCATCACTGCAAGGTGTGGAAGCCAATTTAGGATCTTGTAAAAGGAGGAAAGTTTCTGAAGTCGATCAGGCTCAGCACTCTTCATCGCAGGTGTTAATGTCAATGGATATGACTTCAAAAACTGGATTATACAGTTATGGGGATCTTATATCTGAAGCTAATAAGGGATATGCACCTTCTAGCATTTATGTTTCAGCTCTTCTTCATGTGGTCAGGCACTGTTCACTTGGTATTAAGCATGCCAGACTAACTAGCCAGATGGGGGCTCTGGACATCCCTTATGTTGAAGAAGTGGGGTTAAGAAGTACATCTTCAAACATATGGTTCCGACTTCCATTTGCCAGGGGTGATTCATGGCAACACCTGTGCTTGCGACTTGGCAGAGCTGGAAGCATATATTGGGATGTAAAAATAAATGACCAGCATTTCCGCGATTTGTGGGAGCTTCAGAAAGGAAGCAATACTACACCTTGGGGTTCTGGTGTTCGTATTGCCAATACTTCTGACATTGACTCTCATATTCGTTATGATCCAGAAGGTGTTGTTCTCAGTTATCAGTCTGTGGAGGCTGATAGTATAAAGAAGTTAGTGGCAGATATCCAAAGGCTTTCTAATGCAAGAATGTTTTCCCTGGGGATGCGGAAACTGCTTGGAGTAAGAGCAGATGAGAAACCAGAAGAAAGTGTAAACTCCGATTCTAAAGCACCAGGAGGCAAAGGTTCTTTTGAGGGAGCTGATAGGTTATCTGAACAAATGAGAAGGGCATTTAGAATTGAGGCAGTAGGACTCATGAGTTTGTGGTTCAGTTTTGGATCTGGTGTCCTGGCTCGCTTTGTTGTTGAGTGGGAATCAGGTAAAGAGGGTTGTACTATGCACGTATCTCCTGACCAACTTTGGCCTCATACCAAGTTTCTGGAAGATTTCATAAACGGAGCTGAAGTTGCATCACTTTTGGACTGCATTCGCCTCACTGCGGGTCCCTTACATGCTCTTGCAGCTGCAACTCGACCGGCGCGAGCTGGTCCTATTCCAGGGGTTAGTGGGATGACAATTCTCTCTTCTGTCCCAAAACAGGCCGGGTACGTACCATCCCAGGGCCTTATGCAAACCAGTTCAACCACAAATGTTAGTCAGTCTCCTGTCCCTGTTGGGAACTCTGTTTCATCTGCTGCTACAGGCCCTCTTACAAATCACGGCCTTCACGGGGCTGCAATGTTAGCTGCTGCTGCTGGCCGAGGTGGACCTGGCATTGTACCTAGCTCACTGTTGCCCATTGATGTTTCTGTTGTGCTGCGTGGTCCTTACTGGATACGAATTATATATCGGAAGCACTTTGCAGTTGACATGCGATGTTTTGCAGGAGATCAGGTCTGGTTACAACCAGCAACGCCACCAAAGGGGGGCCCTTCAGTTGGAGGTTCTTTGCCTTGCCCGCAATTTCGGCCATTTATTATGGAGCATGTGGCCCAAGAATTGAATGGTTTAGATACTAATTTCAATGGTGTTCAACAAACGGGATTGGCAAATTTACACACTCAAAACCTCAGTGCAGGTCCCCAGCTGTCTGCTGTCAATGGAAATAGGGTTAACCTCCCTAGTTCTGCTGCATTGTCTAGGACAGGCAATCAAGTAGCTAGTTTGAACCGTGCTGGAAATGCTTCTCCAGTATCCTCGAATTTGGCTGTCATGAGCTCAGGGATGCCTTTACGTAGATCACCAGGTGCAGGTGTCCCTGCTCATGTGAGAGGAGAACTGAATACAGCCATTATTGGTCTTGGAGATGATGGGGGGTATGGAGGTGGTTGGGTCCCCCTTGTTGCTCTTAAAAAGGTGCTGAGAGGTATTCTCAAGTACCTTGGAGTGCTGTGGCTATTTGCCCAGCTGCCCGATCTTTTGAAAGAGATTCTAGGGTCCATTTTGAAAGACAATGAAGGTGCACTATTAAATTTGGACCAGGAGCAGCCTGCTTTGCGTTTCTTTGTGGGTGGCTATGTATTTGCAGTAAGTGTTCATAGAGTTCAACTTCTTCTTCAAGTCCTGAGTGTGAAAAGATTCCATCATCAGCAGCAGCAACAGCAGCAAAATCCAACCACTGCTCAAGAGGAATTGACTCCAACTGAAATAGGAGAAATTTGTGACTACTTTAGTCGACGTGTTGCATCAGAGCCTTACGATGCTTCTCGTGTTGCATCATTCATCACTCTTTTGACCTTACCCATATCAGTTCTAAGAGAATTCTTGAAATTAATAGCATGGAAAAAAGGACTAGCCCAGCTGGTGCAGGGTGGTGATGTAGCTCCTGCTCAGAAACCCCGTATTGAATTATGTCTTGAATATCATGCTGGGTCGAATATAGATGAGAACTCAGATAATTCATCTGTTGCCAAAAGTAATATCCATTATGATCGGCCTCACAACTCGGTTGATTTTGCACTGACTCTTGTTCTTGATTCTGCTCACATACCCCACATAAATGCCGCAGGCGGTGCAGCATGGCTGCCTTACTGTGTATCAGTGAAGTTGAGGTATTCATTTGGCGAAAATCCTAATGTGTCCTTTCTTGGCATGGAAGGAAGCCATGGAGGTCGAGCTTGCTGGTTGCGTGTTGATGACTGGGAGAAGTGTAAACAAAAGGTTGCTCGGACTGTGGAGAGTTGTTCAGGAGGAGACAATAGTCTCGGAAGGTTGAGACTTGTTGCTGACTATGTGCAAAGAACGCTACATGTGTGGCTTCAAGGTTTGAGGGATGGCGGTGTGGTTAGTTCAACCCCTGGGGGCACATGA

Protein Analysis

1819

Amino Acids

197.91

Weight (kDa)

7.26

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Med14 PF08638 9 - 200 3.8e-50 Mediator complex subunit MED14
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 671, 2211
AarI CACCTGC 2 cut(s) 2755, 4391
AbsI CCTCGAGG 1 cut(s) 1937
Acc16I TGCGCA 1 cut(s) 909
Acc36I ACCTGC 5 cut(s) 208, 1603, 2755, 4217, 4391
AccB1I GGYRCC 4 cut(s) 112, 210, 609, 2246
AccB7I CCANNNNNTGG 2 cut(s) 1100, 1661
AccI GTMKAC 3 cut(s) 695, 972, 4825
AccII CGCG 4 cut(s) 54, 59, 3108, 3691
AclI AACGTT 1 cut(s) 1224
AcoI YGGCCR 3 cut(s) 1402, 3907, 4118
AcsI RAATTY 9 cut(s) 575, 1115, 1200, 1837, 4201, 4351, 4621, 4806, 4910
AcuI CTGAAG 7 cut(s) 410, 1400, 2754, 2850, 3107, 3633, 4068
AcyI GRCGYC 2 cut(s) 5, 113
AdeI CACNNNGTG 2 cut(s) 440, 4397
AfeI AGCGCT 1 cut(s) 1885
AflIII ACRYGT 3 cut(s) 1348, 4828, 5398
AjiI CACGTC 1 cut(s) 4829
AjuI GAANNNNNNNTTGG 2 cut(s) 3058, 3090
AleI CACNNNNGTG 1 cut(s) 44
AloI GAACNNNNNNTCC 2 cut(s) 53, 85
Alw21I GWGCWC 7 cut(s) 90, 123, 340, 881, 1670, 4370, 4615
Alw44I GTGCAC 1 cut(s) 4611
AlwNI CAGNNNCTG 1 cut(s) 2895
Ama87I CYCGRG 1 cut(s) 1937
Aor51HI AGCGCT 1 cut(s) 1885
ApaI GGGCCC 1 cut(s) 4082
ApaLI GTGCAC 1 cut(s) 4611
ApoI RAATTY 9 cut(s) 575, 1115, 1200, 1837, 4201, 4351, 4621, 4806, 4910
AseI ATTAAT 1 cut(s) 4922
Asp700I GAANNNNTTC 3 cut(s) 3301, 4333, 4727
AspLEI GCGC 6 cut(s) 56, 115, 720, 910, 1886, 3691
AsuC2I CCSGG 3 cut(s) 1426, 2500, 3754
AsuHPI GGTGA 5 cut(s) 58, 2393, 3035, 4383, 4976
AsuII TTCGAA 1 cut(s) 2641
AvaI CYCGRG 1 cut(s) 1937
AxyI CCTNAGG 1 cut(s) 806
BaeGI GKGCMC 6 cut(s) 612, 1338, 2249, 4082, 4615, 5456
BamHI GGATCC 1 cut(s) 2216
BanI GGYRCC 4 cut(s) 112, 210, 609, 2246
BanII GRGCYC 6 cut(s) 90, 123, 1670, 2944, 4082, 4370
BarI GAAGNNNNNNTAC 4 cut(s) 807, 839, 3124, 3156
BauI CACGAG 1 cut(s) 4857
BbsI GAAGAC 6 cut(s) 416, 1184, 1406, 1910, 2250, 2271
Bbv12I GWGCWC 7 cut(s) 90, 123, 340, 881, 1670, 4370, 4615
BceAI ACGGC 1 cut(s) 3886
BciVI GTATCC 3 cut(s) 621, 3978, 4354
BclI TGATCA 1 cut(s) 2332
BcnI CCSGG 3 cut(s) 1426, 2500, 3754
BfmI CTRYAG 5 cut(s) 360, 732, 1494, 1596, 3849
BfoI RGCGCY 2 cut(s) 116, 1887
BfuAI ACCTGC 5 cut(s) 208, 1603, 2755, 4217, 4391
BfuI GTATCC 3 cut(s) 621, 3978, 4354
BglII AGATCT 3 cut(s) 1051, 1892, 2450
BlpI GCTNAGC 1 cut(s) 2748
BmcAI AGTACT 1 cut(s) 158
BmeT110I CYCGRG 1 cut(s) 1937
BmgBI CACGTC 1 cut(s) 4829
BmrI ACTGGG 4 cut(s) 1864, 2356, 2475, 5299
BmuI ACTGGG 4 cut(s) 1864, 2356, 2475, 5299
BoxI GACNNNNGTC 1 cut(s) 5349
BpiI GAAGAC 6 cut(s) 416, 1184, 1406, 1910, 2250, 2271
BplI GAGNNNNNCTC 2 cut(s) 4506, 4538
BpmI CTGGAG 4 cut(s) 1235, 2030, 2610, 4323
Bpu10I CCTNAGC 2 cut(s) 2351, 4369
Bpu1102I GCTNAGC 1 cut(s) 2748
Bpu14I TTCGAA 1 cut(s) 2641
BpuEI CTTGAG 7 cut(s) 137, 270, 1537, 1592, 1745, 4508, 4758
BpuMI CCSGG 3 cut(s) 1426, 2500, 3754
BsaAI YACGTR 4 cut(s) 1349, 3553, 3760, 4385
BsaBI GATNNNNATC 4 cut(s) 1787, 2397, 2449, 2622
BsaHI GRCGYC 2 cut(s) 5, 113
BsaI GGTCTC 2 cut(s) 2361, 2506
Bse118I RCCGGY 2 cut(s) 457, 3685
Bse21I CCTNAGG 1 cut(s) 806
Bse3DI GCAATG 1 cut(s) 3894
Bse8I GATNNNNATC 4 cut(s) 1787, 2397, 2449, 2622
BseJI GATNNNNATC 4 cut(s) 1787, 2397, 2449, 2622
BseMI GCAATG 1 cut(s) 3894
BseRI GAGGAG 3 cut(s) 77, 4437, 5355
BseSI GKGCMC 6 cut(s) 612, 1338, 2249, 4082, 4615, 5456
BseYI CCCAGC 5 cut(s) 171, 4233, 4554, 4947, 5018
BsgI GTGCAG 6 cut(s) 617, 2010, 4245, 4419, 4976, 5184
Bsh1236I CGCG 4 cut(s) 54, 59, 3108, 3691
Bsh1285I CGRYCG 1 cut(s) 3686
BshNI GGYRCC 4 cut(s) 112, 210, 609, 2246
BsiEI CGRYCG 1 cut(s) 3686
BsiHKAI GWGCWC 7 cut(s) 90, 123, 340, 881, 1670, 4370, 4615
BsiHKCI CYCGRG 1 cut(s) 1937
BsiSI CCGG 7 cut(s) 116, 187, 458, 1426, 2499, 3686, 3753
BslFI GGGAC 9 cut(s) 206, 907, 2463, 3639, 3725, 3803, 4215, 4391, 4469
BsmFI GGGAC 9 cut(s) 206, 907, 2463, 3639, 3725, 3803, 4215, 4391, 4469
BsmI GAATGC 1 cut(s) 3636
Bso31I GGTCTC 2 cut(s) 2361, 2506
BsoBI CYCGRG 1 cut(s) 1937
Bsp119I TTCGAA 1 cut(s) 2641
Bsp120I GGGCCC 1 cut(s) 4078
Bsp1720I GCTNAGC 1 cut(s) 2748
Bsp19I CCATGG 1 cut(s) 5254
BspFNI CGCG 4 cut(s) 54, 59, 3108, 3691
BspHI TCATGA 5 cut(s) 268, 2611, 2626, 3465, 4362
BspMAI CTGCAG 4 cut(s) 364, 736, 1498, 1600
BspMI ACCTGC 5 cut(s) 208, 1603, 2755, 4217, 4391
BspQI GCTCTTC 2 cut(s) 828, 2880
BspT104I TTCGAA 1 cut(s) 2641
BspT107I GGYRCC 4 cut(s) 112, 210, 609, 2246
BspTNI GGTCTC 2 cut(s) 2361, 2506
BsrDI GCAATG 1 cut(s) 3894
BsrFI RCCGGY 2 cut(s) 457, 3685
BssAI RCCGGY 2 cut(s) 457, 3685
BssNAI GTATAC 2 cut(s) 696, 973
BssNI GRCGYC 2 cut(s) 5, 113
BssSI CACGAG 1 cut(s) 4857
BssT1I CCWWGG 3 cut(s) 3146, 4531, 5254
Bst1107I GTATAC 2 cut(s) 696, 973
Bst2BI CACGAG 1 cut(s) 4857
Bst6I CTCTTC 5 cut(s) 828, 2046, 2761, 2880, 3739
BstACI GRCGYC 2 cut(s) 5, 113
BstAPI GCANNNNNTGC 3 cut(s) 181, 2576, 5162
BstBAI YACGTR 4 cut(s) 1349, 3553, 3760, 4385
BstBI TTCGAA 1 cut(s) 2641
BstDSI CCRYGG 3 cut(s) 39, 57, 5254
BstEII GGTNACC 1 cut(s) 396
BstENI CCTNNNNNAGG 1 cut(s) 3705
BstFNI CGCG 4 cut(s) 54, 59, 3108, 3691
BstH2I RGCGCY 2 cut(s) 116, 1887
BstHHI GCGC 6 cut(s) 56, 115, 720, 910, 1886, 3691
BstMCI CGRYCG 1 cut(s) 3686
BstNSI RCATGY 7 cut(s) 184, 481, 2918, 3665, 4024, 4139, 5402
BstPAI GACNNNNGTC 1 cut(s) 5349
BstPI GGTNACC 1 cut(s) 396
BstSFI CTRYAG 5 cut(s) 360, 732, 1494, 1596, 3849
BstSLI GKGCMC 6 cut(s) 612, 1338, 2249, 4082, 4615, 5456
BstSNI TACGTA 2 cut(s) 3760, 4385
BstUI CGCG 4 cut(s) 54, 59, 3108, 3691
BstV2I GAAGAC 6 cut(s) 416, 1184, 1406, 1910, 2250, 2271
BstXI CCANNNNNNTGG 2 cut(s) 2213, 3589
BstZ17I GTATAC 2 cut(s) 696, 973
Bsu36I CCTNAGG 1 cut(s) 806
BsuI GTATCC 3 cut(s) 621, 3978, 4354
BtgI CCRYGG 3 cut(s) 39, 57, 5254
BtgZI GCGATG 3 cut(s) 2613, 2745, 4039
BtrI CACGTC 1 cut(s) 4829
BtsI GCAGTG 4 cut(s) 554, 2681, 3645, 4767
BveI ACCTGC 5 cut(s) 208, 1603, 2755, 4217, 4391
CaiI CAGNNNCTG 1 cut(s) 2895
CciI TCATGA 5 cut(s) 268, 2611, 2626, 3465, 4362
CfoI GCGC 6 cut(s) 56, 115, 720, 910, 1886, 3691
Cfr10I RCCGGY 2 cut(s) 457, 3685
Cfr42I CCGCGG 1 cut(s) 60
CsiI ACCWGGT 2 cut(s) 2473, 4393
DinI GGCGCC 1 cut(s) 114
DraI TTTAAA 3 cut(s) 81, 1476, 1717
DraIII CACNNNGTG 2 cut(s) 440, 4397
EaeI YGGCCR 3 cut(s) 1402, 3907, 4118
Eam1104I CTCTTC 5 cut(s) 828, 2046, 2761, 2880, 3739
EarI CTCTTC 5 cut(s) 828, 2046, 2761, 2880, 3739
Ecl136II GAGCTC 4 cut(s) 88, 121, 1668, 4368
Eco105I TACGTA 2 cut(s) 3760, 4385
Eco130I CCWWGG 3 cut(s) 3146, 4531, 5254
Eco147I AGGCCT 1 cut(s) 1569
Eco24I GRGCYC 6 cut(s) 90, 123, 1670, 2944, 4082, 4370
Eco31I GGTCTC 2 cut(s) 2361, 2506
Eco32I GATATC 2 cut(s) 1930, 3274
Eco47III AGCGCT 1 cut(s) 1885
Eco53kI GAGCTC 4 cut(s) 88, 121, 1668, 4368
Eco57I CTGAAG 7 cut(s) 410, 1400, 2754, 2850, 3107, 3633, 4068
Eco81I CCTNAGG 1 cut(s) 806
Eco88I CYCGRG 1 cut(s) 1937
Eco91I GGTNACC 1 cut(s) 396
EcoICRI GAGCTC 4 cut(s) 88, 121, 1668, 4368
EcoNI CCTNNNNNAGG 1 cut(s) 3705
EcoO109I RGGNCCY 9 cut(s) 220, 862, 3653, 3772, 3854, 4078, 4079, 4229, 4483
EcoO65I GGTNACC 1 cut(s) 396
EcoRI GAATTC 3 cut(s) 575, 1115, 4910
EcoRV GATATC 2 cut(s) 1930, 3274
EcoT14I CCWWGG 3 cut(s) 3146, 4531, 5254
EcoT22I ATGCAT 2 cut(s) 315, 1824
EcoT38I GRGCYC 6 cut(s) 90, 123, 1670, 2944, 4082, 4370
EgeI GGCGCC 1 cut(s) 114
EheI GGCGCC 1 cut(s) 114
ErhI CCWWGG 3 cut(s) 3146, 4531, 5254
FalI AAGNNNNNCTT 4 cut(s) 2119, 2151, 2971, 3003
FaqI GGGAC 9 cut(s) 206, 907, 2463, 3639, 3725, 3803, 4215, 4391, 4469
FauI CCCGC 2 cut(s) 3643, 4116
FauNDI CATATG 3 cut(s) 1169, 2440, 2996
FbaI TGATCA 1 cut(s) 2332
FblI GTMKAC 3 cut(s) 695, 972, 4825
FriOI GRGCYC 6 cut(s) 90, 123, 1670, 2944, 4082, 4370
FspI TGCGCA 1 cut(s) 909
GlaI GCGC 6 cut(s) 55, 114, 719, 909, 1885, 3690
GsaI CCCAGC 5 cut(s) 175, 4237, 4558, 4951, 5022
GsuI CTGGAG 4 cut(s) 1235, 2030, 2610, 4323
HaeII RGCGCY 2 cut(s) 116, 1887
HapII CCGG 7 cut(s) 116, 187, 458, 1426, 2499, 3686, 3753
HhaI GCGC 6 cut(s) 56, 115, 720, 910, 1886, 3691
Hin1I GRCGYC 2 cut(s) 5, 113
Hin6I GCGC 6 cut(s) 54, 113, 718, 908, 1884, 3689
HinP1I GCGC 6 cut(s) 54, 113, 718, 908, 1884, 3689
HincII GTYRAC 4 cut(s) 1807, 4018, 4264, 4826
HindII GTYRAC 4 cut(s) 1807, 4018, 4264, 4826
HindIII AAGCTT 2 cut(s) 330, 1843
HpaI GTTAAC 2 cut(s) 1807, 4264
HpaII CCGG 7 cut(s) 116, 187, 458, 1426, 2499, 3686, 3753
HphI GGTGA 5 cut(s) 58, 2393, 3035, 4383, 4976
Hpy99I CGWCG 2 cut(s) 10, 4830
HpyCH4IV ACGT 8 cut(s) 257, 1224, 1348, 2238, 3552, 3759, 4384, 4828
HpySE526I ACGT 8 cut(s) 257, 1224, 1348, 2238, 3552, 3759, 4384, 4828
Hsp92I GRCGYC 2 cut(s) 5, 113
HspAI GCGC 6 cut(s) 54, 113, 718, 908, 1884, 3689
KasI GGCGCC 1 cut(s) 112
KflI GGGWCCC 2 cut(s) 3653, 4483
KroI GCCGGC 1 cut(s) 457
KroNI GCCGGC 1 cut(s) 459
Ksp22I TGATCA 1 cut(s) 2332
KspAI GTTAAC 2 cut(s) 1807, 4264
KspI CCGCGG 1 cut(s) 60
LguI GCTCTTC 2 cut(s) 828, 2880
MabI ACCWGGT 2 cut(s) 2473, 4393
MaeII ACGT 8 cut(s) 257, 1224, 1348, 2238, 3552, 3759, 4384, 4828
MaeIII GTNAC 7 cut(s) 396, 1286, 2234, 2518, 2557, 4050, 4811
MfeI CAATTG 1 cut(s) 1953
Mly113I GGCGCC 1 cut(s) 113
MlyI GAGTC 8 cut(s) 74, 1723, 2544, 2601, 3182, 3456, 4780, 5107
MmeI TCCRAC 5 cut(s) 2646, 3028, 4069, 4787, 4814
Mph1103I ATGCAT 2 cut(s) 315, 1824
MroNI GCCGGC 1 cut(s) 457
MroXI GAANNNNTTC 3 cut(s) 3301, 4333, 4727
MslI CAYNNNNRTG 6 cut(s) 44, 482, 1018, 1827, 2211, 5148
MspA1I CMGCKG 7 cut(s) 59, 394, 691, 3674, 4237, 4558, 4951
MspI CCGG 7 cut(s) 116, 187, 458, 1426, 2499, 3686, 3753
MunI CAATTG 1 cut(s) 1953
Mva1269I GAATGC 1 cut(s) 3636
MvnI CGCG 4 cut(s) 54, 59, 3108, 3691
NaeI GCCGGC 1 cut(s) 459
NarI GGCGCC 1 cut(s) 113
NciI CCSGG 3 cut(s) 1426, 2500, 3754
NcoI CCATGG 1 cut(s) 5254
NdeI CATATG 3 cut(s) 1169, 2440, 2996
NgoMIV GCCGGC 1 cut(s) 457
NmeAIII GCCGAG 1 cut(s) 3935
NmuCI GTSAC 2 cut(s) 1286, 4811
NsbI TGCGCA 1 cut(s) 909
NsiI ATGCAT 2 cut(s) 315, 1824
NspI RCATGY 7 cut(s) 184, 481, 2918, 3665, 4024, 4139, 5402
NspV TTCGAA 1 cut(s) 2641
OliI CACNNNNGTG 1 cut(s) 44
PaeI GCATGC 2 cut(s) 184, 2918
PaeR7I CTCGAG 1 cut(s) 1937
PagI TCATGA 5 cut(s) 268, 2611, 2626, 3465, 4362
PaqCI CACCTGC 2 cut(s) 2755, 4391
PasI CCCWGGG 3 cut(s) 3307, 3769, 5447
PceI AGGCCT 1 cut(s) 1569
PciI ACATGT 1 cut(s) 5398
PciSI GCTCTTC 2 cut(s) 828, 2880
PcsI WCGNNNNNNNCGW 1 cut(s) 3688
PctI GAATGC 1 cut(s) 3636
PdiI GCCGGC 1 cut(s) 459
PdmI GAANNNNTTC 3 cut(s) 3301, 4333, 4727
PflFI GACNNNGTC 1 cut(s) 800
PflMI CCANNNNNTGG 2 cut(s) 1100, 1661
PfoI TCCNGGA 2 cut(s) 1042, 1424
PleI GAGTC 8 cut(s) 73, 1723, 2543, 2600, 3182, 3456, 4780, 5107
PluTI GGCGCC 1 cut(s) 116
PpsI GAGTC 8 cut(s) 73, 1723, 2543, 2600, 3182, 3456, 4780, 5107
Ppu21I YACGTR 4 cut(s) 1349, 3553, 3760, 4385
PpuMI RGGWCCY 5 cut(s) 220, 862, 3653, 4229, 4483
PscI ACATGT 1 cut(s) 5398
PshAI GACNNNNGTC 1 cut(s) 5349
PshBI ATTAAT 1 cut(s) 4922
PsiI TTATAA 2 cut(s) 671, 2211
Psp124BI GAGCTC 4 cut(s) 90, 123, 1670, 4370
Psp1406I AACGTT 1 cut(s) 1224
Psp5II RGGWCCY 5 cut(s) 220, 862, 3653, 4229, 4483
PspEI GGTNACC 1 cut(s) 396
PspFI CCCAGC 5 cut(s) 171, 4233, 4554, 4947, 5018
PspOMI GGGCCC 1 cut(s) 4078
PspPPI RGGWCCY 5 cut(s) 220, 862, 3653, 4229, 4483
PspXI VCTCGAGB 1 cut(s) 1937
PstI CTGCAG 4 cut(s) 364, 736, 1498, 1600
PstNI CAGNNNCTG 1 cut(s) 2895
PsyI GACNNNGTC 1 cut(s) 800
PvuII CAGCTG 4 cut(s) 3674, 4237, 4558, 4951
RseI CAYNNNNRTG 6 cut(s) 44, 482, 1018, 1827, 2211, 5148
SacI GAGCTC 4 cut(s) 90, 123, 1670, 4370
SacII CCGCGG 1 cut(s) 60
SalI GTCGAC 1 cut(s) 4824
SapI GCTCTTC 2 cut(s) 828, 2880
ScaI AGTACT 1 cut(s) 158
SchI GAGTC 8 cut(s) 74, 1723, 2544, 2601, 3182, 3456, 4780, 5107
SexAI ACCWGGT 2 cut(s) 2473, 4393
SfcI CTRYAG 5 cut(s) 360, 732, 1494, 1596, 3849
SfoI GGCGCC 1 cut(s) 114
Sfr274I CTCGAG 1 cut(s) 1937
Sfr303I CCGCGG 1 cut(s) 60
SfuI TTCGAA 1 cut(s) 2641
SgrBI CCGCGG 1 cut(s) 60
SlaI CTCGAG 1 cut(s) 1937
SmiMI CAYNNNNRTG 6 cut(s) 44, 482, 1018, 1827, 2211, 5148
SmlI CTYRAG 8 cut(s) 152, 285, 1516, 1571, 1724, 1937, 4523, 4773
SmoI CTYRAG 8 cut(s) 152, 285, 1516, 1571, 1724, 1937, 4523, 4773
SnaBI TACGTA 2 cut(s) 3760, 4385
SphI GCATGC 2 cut(s) 184, 2918
SseBI AGGCCT 1 cut(s) 1569
SspDI GGCGCC 1 cut(s) 112
SspI AATATT 2 cut(s) 236, 1432
SstI GAGCTC 4 cut(s) 90, 123, 1670, 4370
StuI AGGCCT 1 cut(s) 1569
StyI CCWWGG 3 cut(s) 3146, 4531, 5254
TaiI ACGT 8 cut(s) 260, 1227, 1351, 2241, 3555, 3762, 4387, 4831
TatI WGTACW 5 cut(s) 156, 756, 814, 2981, 3542
TauI GCSGC 5 cut(s) 59, 110, 113, 1407, 5156
TseFI GTSAC 2 cut(s) 1286, 4811
Tsp45I GTSAC 2 cut(s) 1286, 4811
TspGWI ACGGA 4 cut(s) 1014, 1801, 1940, 3621
Tth111I GACNNNGTC 1 cut(s) 800
Van91I CCANNNNNTGG 2 cut(s) 1100, 1661
VneI GTGCAC 1 cut(s) 4611
VspI ATTAAT 1 cut(s) 4922
XagI CCTNNNNNAGG 1 cut(s) 3705
XapI RAATTY 9 cut(s) 575, 1115, 1200, 1837, 4201, 4351, 4621, 4806, 4910
XceI RCATGY 7 cut(s) 184, 481, 2918, 3665, 4024, 4139, 5402
XcmI CCANNNNNNNNNTGG 2 cut(s) 2139, 4151
XhoI CTCGAG 1 cut(s) 1937
XmiI GTMKAC 3 cut(s) 695, 972, 4825
XmnI GAANNNNTTC 3 cut(s) 3301, 4333, 4727
ZrmI AGTACT 1 cut(s) 158
Zsp2I ATGCAT 2 cut(s) 315, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.