Ribosomal L32p protein family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26740 AT1G69485 |
| fragaria_vesca | FvH4_4g13880 FvH4_4g13880 |
| malus_domestica | MD04G1010200.v1.1 |
| prunus_persica | Prupe.1G009500_v2.0.a1 |
| pyrus_communis | pycom04g00830 pycom420g01310 |
| rosa_chinensis | RchiOBHm_Chr4g0414951 RchiOBHm_Chr4g0415001 RchiOBHm_Chr6g0251041 |
| rosa_laevigata | RLG00000008107 RLG00000015488 |
| rosa_multiflora | Rmu_sc0001017.1_g000010 |
| rosa_roxburghii | Rroxscaffold_5G00358730 Rroxscaffold_7G00217100 |
| rosa_rugosa | Rorug02G0049300 Rorug04G0131100 Rorug04G0131200 Rorug04G0131300 Rorug04G0131300 Rorug05G0499800 |
| rosa_samantha | Rh4AG190600 Rh4BG188600 Rh4CG201800 Rh4DG189200 Rh6AG007900 Rh6BG003200 Rh6CG005300 Rh6DG005600 |
| rosa_wichuraiana | Rw4G016190 Rw4G016230 Rw6G000880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 28 |
| AccB1I | GGYRCC | 1 cut(s) | 28 |
| AfaI | GTAC | 1 cut(s) | 30 |
| AgsI | TTSAA | 2 cut(s) | 187, 256 |
| AluBI | AGCT | 2 cut(s) | 223, 283 |
| AluI | AGCT | 2 cut(s) | 223, 283 |
| Ama87I | CYCGRG | 1 cut(s) | 169 |
| AseI | ATTAAT | 1 cut(s) | 21 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 164 |
| Asp718I | GGTACC | 1 cut(s) | 28 |
| AspS9I | GGNCC | 1 cut(s) | 137 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| AvaI | CYCGRG | 1 cut(s) | 169 |
| AvaII | GGWCC | 1 cut(s) | 137 |
| BanI | GGYRCC | 1 cut(s) | 28 |
| BbsI | GAAGAC | 1 cut(s) | 244 |
| BccI | CCATC | 2 cut(s) | 68, 116 |
| BciVI | GTATCC | 1 cut(s) | 124 |
| BfuI | GTATCC | 1 cut(s) | 124 |
| Bme18I | GGWCC | 1 cut(s) | 137 |
| BmeT110I | CYCGRG | 1 cut(s) | 169 |
| BmgT120I | GGNCC | 1 cut(s) | 137 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BpiI | GAAGAC | 1 cut(s) | 244 |
| Bse1I | ACTGG | 1 cut(s) | 139 |
| BseNI | ACTGG | 1 cut(s) | 139 |
| BshNI | GGYRCC | 1 cut(s) | 28 |
| BsiHKCI | CYCGRG | 1 cut(s) | 169 |
| BslFI | GGGAC | 1 cut(s) | 25 |
| BsmFI | GGGAC | 1 cut(s) | 25 |
| BsoBI | CYCGRG | 1 cut(s) | 169 |
| BspHI | TCATGA | 1 cut(s) | 106 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspT107I | GGYRCC | 1 cut(s) | 28 |
| BsrI | ACTGG | 1 cut(s) | 139 |
| Bst6I | CTCTTC | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 1 cut(s) | 261 |
| BstNSI | RCATGY | 1 cut(s) | 263 |
| BstV2I | GAAGAC | 1 cut(s) | 244 |
| BsuI | GTATCC | 1 cut(s) | 124 |
| BtsI | GCAGTG | 1 cut(s) | 270 |
| BtsIMutI | CAGTG | 2 cut(s) | 61, 270 |
| Cac8I | GCNNGC | 1 cut(s) | 261 |
| CciI | TCATGA | 1 cut(s) | 106 |
| Cfr13I | GGNCC | 1 cut(s) | 137 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviAII | CATG | 2 cut(s) | 107, 260 |
| CviJI | RGCY | 2 cut(s) | 223, 283 |
| CviKI_1 | RGCY | 2 cut(s) | 223, 283 |
| CviQI | GTAC | 1 cut(s) | 29 |
| Eam1104I | CTCTTC | 1 cut(s) | 155 |
| EarI | CTCTTC | 1 cut(s) | 155 |
| Eco32I | GATATC | 1 cut(s) | 66 |
| Eco47I | GGWCC | 1 cut(s) | 137 |
| Eco88I | CYCGRG | 1 cut(s) | 169 |
| EcoRV | GATATC | 1 cut(s) | 66 |
| FaeI | CATG | 2 cut(s) | 110, 263 |
| FaiI | YATR | 5 cut(s) | 39, 108, 199, 203, 261 |
| FaqI | GGGAC | 1 cut(s) | 25 |
| FatI | CATG | 2 cut(s) | 106, 259 |
| Hin1II | CATG | 2 cut(s) | 110, 263 |
| HincII | GTYRAC | 1 cut(s) | 270 |
| HindII | GTYRAC | 1 cut(s) | 270 |
| HinfI | GANTC | 3 cut(s) | 83, 165, 208 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 270 |
| Hpy188I | TCNGA | 3 cut(s) | 70, 88, 247 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| Hpy8I | GTNNAC | 1 cut(s) | 270 |
| HpyCH4V | TGCA | 2 cut(s) | 191, 263 |
| Hsp92II | CATG | 2 cut(s) | 110, 263 |
| KpnI | GGTACC | 1 cut(s) | 32 |
| LpnPI | CCDG | 2 cut(s) | 45, 120 |
| MboII | GAAGA | 3 cut(s) | 53, 172, 244 |
| MluCI | AATT | 2 cut(s) | 18, 241 |
| MnlI | CCTC | 1 cut(s) | 121 |
| MroXI | GAANNNNTTC | 1 cut(s) | 164 |
| MseI | TTAA | 1 cut(s) | 21 |
| NlaIII | CATG | 2 cut(s) | 110, 263 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| NspI | RCATGY | 1 cut(s) | 263 |
| PaeI | GCATGC | 1 cut(s) | 263 |
| PagI | TCATGA | 1 cut(s) | 106 |
| PdmI | GAANNNNTTC | 1 cut(s) | 164 |
| PfeI | GAWTC | 3 cut(s) | 83, 165, 208 |
| PshBI | ATTAAT | 1 cut(s) | 21 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PspPI | GGNCC | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| SaqAI | TTAA | 1 cut(s) | 21 |
| Sau96I | GGNCC | 1 cut(s) | 137 |
| SetI | ASST | 4 cut(s) | 30, 142, 225, 285 |
| SinI | GGWCC | 1 cut(s) | 137 |
| SphI | GCATGC | 1 cut(s) | 263 |
| Sse9I | AATT | 2 cut(s) | 18, 241 |
| TasI | AATT | 2 cut(s) | 18, 241 |
| TfiI | GAWTC | 3 cut(s) | 83, 165, 208 |
| Tru1I | TTAA | 1 cut(s) | 21 |
| Tru9I | TTAA | 1 cut(s) | 21 |
| TscAI | CASTG | 2 cut(s) | 61, 270 |
| TspDTI | ATGAA | 2 cut(s) | 54, 95 |
| TspRI | CASTG | 2 cut(s) | 61, 270 |
| VpaK11BI | GGWCC | 1 cut(s) | 137 |
| VspI | ATTAAT | 1 cut(s) | 21 |
| XceI | RCATGY | 1 cut(s) | 263 |
| XmnI | GAANNNNTTC | 1 cut(s) | 164 |