Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003087

Physical Location & Seq

Genomic Coordinates Reverse (-)

90941 .. 93924

Gene Structure 2984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0001000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGGAGGAGGAGGAGGAGGACTGCGAAAAGCGGCCAAGAAGATGGTGGTGGCAGCTGCCAATGCATGTGGTGGTTCCTTCTCTTCCAGGAGGAAGCCTCTTGTGGACCCCATCGTCTTCTTCGATCATACCACGGCCACTGCCTCTATCTCAGGTTCTTCGGCTGTGTCTCCCACCAACTCCACAGCAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAATGCATTGCAAAGGAGACGGAATCTGCAATCACCAATTCTAACAATGTACCTTCTTCTTCTTCTTCTAATAAGAACTTGTGCGCAATATGTCTAGACCCTCTGAGTTACCATAGCAAGGGACGGATCTCAGGGCAGGCTATATTCACGGCCCAGTGCTCCCATGCATTCCACTTTGCCTGCATCTCTTCCAATGTCCGCCATGGTAGTGTCACCTGCCCCATCTGCCGTGCCCATTGGACTCAGCTGCCCCGCAATCTGAACCCACCTGGTGGTTCCCTTTCCTCTTGCAACCCAACTGATCCCATCCTCCAAATCCTTGATGACTCTATAGCCACTTTCCGCATCCACAGGCGCTCTTTCCTGCGCTCTGCTCGCTATGATGATGACGACCCAATTGAGCCTCCTGATCACATGCCTAATTTCCCCCGTCTCCAATTCTCTCTAGCACCCTTACCACCTAGTACTCCACCCCATAGCTTTCAACCGTCCTGGTGCACCACACACCCATATCATCCACCCCCACATCACCTGAGCTATAGCTCCACATCATTGTTACAATCGCCAACCAGGCCAAAGCCCTATGCTACTATGTATGCCTCTTCGGACAGAGCTTATCTTTCGGTGAAATTGGCAGAGCAGCGAGCAACTGATTTTGTCTTGGTTGCTAGTCCCAACGGACCACACTTGAGGCTTCTCAAGCAGTGCATGGCATTGGTGGTTTTCTCCCTTAGACCTATTGATCGTTTGGCCATTGTTACATACTCATCAGCTGCTGCTCGTGTCTTCCCTCTAAGACGCATGACATCTTATGGGAAGCGAACAGCCCAGCAGGTTATTGACCGCCTGTTCTACATGGGGCAAGCAGATCCAGTGGAAGGGCTCAAGAAAGGGATCAAGATACTTCAAGATCGTGTATACAAGAATCAAAATTCGGGCATCCTGCATCTTTCTGACACCCCAACTCGATCCTACCATGCTGCTCTCAATATGGACGTGCCCATTCCAGTGCATCGTTTTCATGTAGGATTTGGATTTGGCACTTCAAATGGTTTTATCATGCATGAATTTGAAGAGTTCCTCAGAGGACTCATAGGTGGTGTTGTTAGAGAAATCCAGTTAAGGATCAGCACAACGGAGGAAGCCAGCAGTAGGATTGTAAGAATAGGAGAGCTAAGAAACGGAGAAGAAAGGAAAATCTTAGTTGACTTGAGTGTTTGTCGACATATTTGTGTGGGATACAGCTACATAGAGGATGGTGAGATTGACGAACCTATCACAACAGGGGAAACTATGGTGAGCATAGGAGACGGTAAAAGTAATATTAGTGCTGCTGAAGCAGCTTCTGCTGGGTCAGGGACGAGCGGTCCAATTATTGGTGGGAGGCCTAGTAGTGCAGACAGTTGGGACTACCATGATCCTTACATGGCTAGAAGATGGGCCAAACATTTGCATGGCTACAGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009908 GO:0010093 GO:0010097 GO:0022414 GO:0032501 GO:0032502 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K-box SRF-TF

Protein Analysis

561

Amino Acids

61.39

Weight (kDa)

8.18

Isoelectric Point (pI)

60.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	99 - 149	2.1e-07	Ring finger domain
zf-rbx1	PF12678	99 - 149	1.3e-06	RING-H2 zinc finger domain
zf-C3HC4	PF00097	100 - 148	1.9e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	100 - 134	1.8e-06	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18960 AT4G18960 AT4G18960 AT4G18960
fragaria_vesca	FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720
malus_domestica	MD05G1293700.v1.1 MD10G1271000.v1.1
prunus_persica	Prupe.3G111300_v2.0.a1 Prupe.4G070500_v2.0.a1 Prupe.4G070500_v2.0.a1 Prupe.4G070500_v2.0.a1 Prupe.4G070500_v2.0.a1
pyrus_communis	pycom05g27100 pycom10g22680
rosa_chinensis	RchiOBHm_Chr5g0012431
rosa_laevigata	RLG00000031913
rosa_multiflora	Rmu_sc0003469.1_g000006 Rmu_sc0003469.1_g000007
rosa_roxburghii	Rroxscaffold_1G00064240
rosa_rugosa	Rorug05G0000900 Rorug05G0001000 Rorug05G0001100 Rorug05G0001200 Rorug05G0001300 Rorug05G0001300 Rorug05G0001400
rosa_samantha	Rh5AG095600 Rh5BG091800 Rh5CG104600 Rh5DG091200
rosa_wichuraiana	Rw5G008360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	440
AasI	GACNNNNNNGTC	1 cut(s)	113
Acc16I	TGCGCA	1 cut(s)	301
Acc36I	ACCTGC	2 cut(s)	440, 1039
AccB7I	CCANNNNNTGG	2 cut(s)	488, 1592
AccBSI	CCGCTC	1 cut(s)	1581
AccI	GTMKAC	2 cut(s)	1134, 1438
AciI	CCGC	6 cut(s)	32, 415, 469, 559, 1060, 1581
AclWI	GGATC	7 cut(s)	350, 512, 1079, 1118, 1179, 1349, 1628
AcoI	YGGCCR	3 cut(s)	33, 135, 966
AcsI	RAATTY	2 cut(s)	1147, 1283
AcuI	CTGAAG	1 cut(s)	1572
AdeI	CACNNNGTG	1 cut(s)	488
AfaI	GTAC	2 cut(s)	267, 682
AfiI	CCNNNNNNNGG	5 cut(s)	334, 488, 1094, 1368, 1592
AgsI	TTSAA	4 cut(s)	701, 1124, 1263, 1289
AhdI	GACNNNNNGTC	1 cut(s)	1581
AjiI	CACGTC	1 cut(s)	1213
AjnI	CCWGG	4 cut(s)	86, 484, 707, 785
Alw21I	GWGCWC	2 cut(s)	377, 716
Alw26I	GTCTC	4 cut(s)	174, 227, 653, 1518
Alw44I	GTGCAC	1 cut(s)	712
AlwI	GGATC	7 cut(s)	350, 512, 1079, 1118, 1179, 1349, 1628
AlwNI	CAGNNNCTG	2 cut(s)	992, 1562
AoxI	GGCC	7 cut(s)	33, 135, 366, 788, 966, 1601, 1656
ApaLI	GTGCAC	1 cut(s)	712
ApoI	RAATTY	2 cut(s)	1147, 1283
AspLEI	GCGC	3 cut(s)	302, 573, 585
AspS9I	GGNCC	5 cut(s)	106, 367, 896, 1583, 1656
AsuHPI	GGTGA	6 cut(s)	241, 421, 737, 853, 1487, 1525
AvaII	GGWCC	3 cut(s)	106, 896, 1583
BaeGI	GKGCMC	3 cut(s)	451, 716, 1218
BalI	TGGCCA	1 cut(s)	968
BanII	GRGCYC	1 cut(s)	1101
BauI	CACGAG	1 cut(s)	996
BbsI	GAAGAC	2 cut(s)	109, 994
Bbv12I	GWGCWC	2 cut(s)	377, 716
BccI	CCATC	6 cut(s)	37, 119, 446, 530, 1466, 1647
BceAI	ACGGC	3 cut(s)	150, 381, 429
BciT130I	CCWGG	4 cut(s)	88, 486, 709, 787
BciVI	GTATCC	1 cut(s)	1448
BclI	TGATCA	1 cut(s)	625
BcoDI	GTCTC	4 cut(s)	174, 227, 653, 1518
BfaI	CTAG	6 cut(s)	311, 662, 678, 885, 1605, 1647
BfmI	CTRYAG	3 cut(s)	546, 754, 1675
BfoI	RGCGCY	1 cut(s)	574
BfuAI	ACCTGC	2 cut(s)	440, 1039
BfuI	GTATCC	1 cut(s)	1448
BglI	GCCNNNNNGGC	1 cut(s)	787
BmcAI	AGTACT	1 cut(s)	682
Bme1390I	CCNGG	4 cut(s)	88, 486, 709, 787
Bme18I	GGWCC	3 cut(s)	106, 896, 1583
BmeRI	GACNNNNNGTC	1 cut(s)	1581
BmgBI	CACGTC	1 cut(s)	1213
BmgT120I	GGNCC	5 cut(s)	106, 367, 896, 1583, 1656
BmiI	GGNNCC	3 cut(s)	76, 108, 493
BmrFI	CCNGG	4 cut(s)	88, 486, 709, 787
BmrI	ACTGGG	1 cut(s)	364
BmsI	GCATC	5 cut(s)	408, 570, 1164, 1171, 1237
BmuI	ACTGGG	1 cut(s)	364
BpiI	GAAGAC	2 cut(s)	109, 994
BplI	GAGNNNNNCTC	2 cut(s)	82, 114
Bpu10I	CCTNAGC	1 cut(s)	749
BpuEI	CTTGAG	4 cut(s)	899, 925, 1085, 1447
BsaJI	CCNNGG	2 cut(s)	132, 418
BsaXI	ACNNNNNCTCC	2 cut(s)	1591, 1621
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 488, 1094, 1368, 1592
Bse1I	ACTGG	4 cut(s)	370, 1088, 1223, 1333
Bse3DI	GCAATG	1 cut(s)	222
BseBI	CCWGG	4 cut(s)	88, 486, 709, 787
BseDI	CCNNGG	2 cut(s)	132, 418
BseGI	GGATG	5 cut(s)	522, 561, 730, 1155, 1477
BseLI	CCNNNNNNNGG	5 cut(s)	334, 488, 1094, 1368, 1592
BseMI	GCAATG	1 cut(s)	222
BseMII	CTCAG	6 cut(s)	165, 311, 360, 473, 740, 1312
BseNI	ACTGG	4 cut(s)	370, 1088, 1223, 1333
BseRI	GAGGAG	4 cut(s)	21, 24, 27, 30
BseSI	GKGCMC	3 cut(s)	451, 716, 1218
BseYI	CCCAGC	2 cut(s)	1044, 1565
BsgI	GTGCAG	1 cut(s)	1632
BshFI	GGCC	7 cut(s)	35, 137, 368, 790, 968, 1603, 1658
BsiHKAI	GWGCWC	2 cut(s)	377, 716
BslFI	GGGAC	4 cut(s)	351, 873, 1588, 1637
BslI	CCNNNNNNNGG	5 cut(s)	334, 488, 1094, 1368, 1592
BsmAI	GTCTC	4 cut(s)	174, 227, 653, 1518
BsmBI	CGTCTC	3 cut(s)	227, 653, 1518
BsmFI	GGGAC	4 cut(s)	351, 873, 1588, 1637
BsmI	GAATGC	2 cut(s)	224, 383
BsnI	GGCC	7 cut(s)	35, 137, 368, 790, 968, 1603, 1658
Bsp1286I	GDGCHC	5 cut(s)	377, 451, 716, 1101, 1218
Bsp19I	CCATGG	1 cut(s)	418
BspACI	CCGC	6 cut(s)	32, 415, 469, 559, 1060, 1581
BspANI	GGCC	7 cut(s)	35, 137, 368, 790, 968, 1603, 1658
BspCNI	CTCAG	6 cut(s)	164, 312, 359, 472, 741, 1311
BspLI	GGNNCC	3 cut(s)	76, 108, 493
BspMI	ACCTGC	2 cut(s)	440, 1039
BspPI	GGATC	7 cut(s)	350, 512, 1079, 1118, 1179, 1349, 1628
BsrBI	CCGCTC	1 cut(s)	1581
BsrDI	GCAATG	1 cut(s)	222
BsrI	ACTGG	4 cut(s)	370, 1088, 1223, 1333
BssECI	CCNNGG	2 cut(s)	132, 418
BssNAI	GTATAC	1 cut(s)	1135
BssSI	CACGAG	1 cut(s)	996
BssT1I	CCWWGG	1 cut(s)	418
Bst1107I	GTATAC	1 cut(s)	1135
Bst2BI	CACGAG	1 cut(s)	996
Bst2UI	CCWGG	4 cut(s)	88, 486, 709, 787
Bst4CI	ACNGT	3 cut(s)	705, 1529, 1619
Bst6I	CTCTTC	4 cut(s)	88, 409, 823, 1284
BstAPI	GCANNNNNTGC	1 cut(s)	1562
BstC8I	GCNNGC	6 cut(s)	354, 397, 592, 861, 1080, 1363
BstDSI	CCRYGG	2 cut(s)	132, 418
BstF5I	GGATG	5 cut(s)	522, 561, 730, 1155, 1477
BstH2I	RGCGCY	1 cut(s)	574
BstHHI	GCGC	3 cut(s)	302, 573, 585
BstMAI	GTCTC	4 cut(s)	174, 227, 653, 1518
BstMWI	GCNNNNNNNGC	8 cut(s)	62, 441, 591, 787, 916, 1553, 1556, 1562
BstNI	CCWGG	4 cut(s)	88, 486, 709, 787
BstNSI	RCATGY	2 cut(s)	69, 634
BstSCI	CCNGG	4 cut(s)	86, 484, 707, 785
BstSFI	CTRYAG	3 cut(s)	546, 754, 1675
BstSLI	GKGCMC	3 cut(s)	451, 716, 1218
BstV2I	GAAGAC	2 cut(s)	109, 994
BstX2I	RGATCY	2 cut(s)	342, 1084
BstXI	CCANNNNNNTGG	1 cut(s)	43
BstYI	RGATCY	2 cut(s)	342, 1084
BstZ17I	GTATAC	1 cut(s)	1135
BsuI	GTATCC	1 cut(s)	1448
BsuRI	GGCC	7 cut(s)	35, 137, 368, 790, 968, 1603, 1658
BtgI	CCRYGG	2 cut(s)	132, 418
BtrI	CACGTC	1 cut(s)	1213
BtsCI	GGATG	5 cut(s)	522, 561, 730, 1155, 1477
BtsI	GCAGTG	2 cut(s)	138, 926
BtsIMutI	CAGTG	5 cut(s)	138, 377, 926, 1095, 1230
BveI	ACCTGC	2 cut(s)	440, 1039
Cac8I	GCNNGC	6 cut(s)	354, 397, 592, 861, 1080, 1363
CaiI	CAGNNNCTG	2 cut(s)	992, 1562
CfoI	GCGC	3 cut(s)	302, 573, 585
Cfr13I	GGNCC	5 cut(s)	106, 367, 896, 1583, 1656
CseI	GACGC	1 cut(s)	1023
CsiI	ACCWGGT	1 cut(s)	484
Csp6I	GTAC	2 cut(s)	266, 681
CspCI	CAANNNNNGTGG	2 cut(s)	49, 84
CviQI	GTAC	2 cut(s)	266, 681
DraIII	CACNNNGTG	1 cut(s)	488
DrdI	GACNNNNNNGTC	1 cut(s)	113
DriI	GACNNNNNGTC	1 cut(s)	1581
DseDI	GACNNNNNNGTC	1 cut(s)	113
EaeI	YGGCCR	3 cut(s)	33, 135, 966
Eam1104I	CTCTTC	4 cut(s)	88, 409, 823, 1284
Eam1105I	GACNNNNNGTC	1 cut(s)	1581
EarI	CTCTTC	4 cut(s)	88, 409, 823, 1284
EciI	GGCGGA	1 cut(s)	404
Eco130I	CCWWGG	1 cut(s)	418
Eco147I	AGGCCT	1 cut(s)	1603
Eco24I	GRGCYC	1 cut(s)	1101
Eco47I	GGWCC	3 cut(s)	106, 896, 1583
Eco57I	CTGAAG	1 cut(s)	1572
EcoRII	CCWGG	4 cut(s)	86, 484, 707, 785
EcoT14I	CCWWGG	1 cut(s)	418
EcoT22I	ATGCAT	4 cut(s)	67, 224, 385, 1281
EcoT38I	GRGCYC	1 cut(s)	1101
ErhI	CCWWGG	1 cut(s)	418
Esp3I	CGTCTC	3 cut(s)	227, 653, 1518
FaqI	GGGAC	4 cut(s)	351, 873, 1588, 1637
FauI	CCCGC	1 cut(s)	476
FbaI	TGATCA	1 cut(s)	625
FblI	GTMKAC	2 cut(s)	1134, 1438
FokI	GGATG	5 cut(s)	509, 548, 717, 1142, 1484
FriOI	GRGCYC	1 cut(s)	1101
FspBI	CTAG	6 cut(s)	311, 662, 678, 885, 1605, 1647
FspI	TGCGCA	1 cut(s)	301
GlaI	GCGC	3 cut(s)	301, 572, 584
GsaI	CCCAGC	2 cut(s)	1048, 1569
HaeII	RGCGCY	1 cut(s)	574
HaeIII	GGCC	7 cut(s)	35, 137, 368, 790, 968, 1603, 1658
HgaI	GACGC	1 cut(s)	1023
HhaI	GCGC	3 cut(s)	302, 573, 585
Hin6I	GCGC	3 cut(s)	300, 571, 583
HinP1I	GCGC	3 cut(s)	300, 571, 583
HincII	GTYRAC	2 cut(s)	1423, 1439
HindII	GTYRAC	2 cut(s)	1423, 1439
HinfI	GANTC	5 cut(s)	239, 457, 542, 1141, 1305
HphI	GGTGA	6 cut(s)	241, 421, 737, 853, 1487, 1525
Hpy166II	GTNNAC	5 cut(s)	106, 714, 1135, 1423, 1439
Hpy188I	TCNGA	5 cut(s)	321, 477, 823, 1171, 1301
Hpy188III	TCNNGA	5 cut(s)	311, 623, 1102, 1114, 1124
Hpy8I	GTNNAC	5 cut(s)	106, 714, 1135, 1423, 1439
HpyAV	CCTTC	3 cut(s)	88, 279, 1088
HpyCH4III	ACNGT	3 cut(s)	705, 1529, 1619
HpyCH4IV	ACGT	1 cut(s)	1212
HpyF10VI	GCNNNNNNNGC	8 cut(s)	62, 441, 591, 787, 916, 1553, 1556, 1562
HpySE526I	ACGT	1 cut(s)	1212
HspAI	GCGC	3 cut(s)	300, 571, 583
Ksp22I	TGATCA	1 cut(s)	625
LmnI	GCTCC	2 cut(s)	380, 764
LweI	GCATC	5 cut(s)	408, 570, 1164, 1171, 1237
MabI	ACCWGGT	1 cut(s)	484
MaeI	CTAG	6 cut(s)	311, 662, 678, 885, 1605, 1647
MaeII	ACGT	1 cut(s)	1212
MaeIII	GTNAC	4 cut(s)	323, 427, 771, 973
MbiI	CCGCTC	1 cut(s)	1581
MfeI	CAATTG	1 cut(s)	612
MflI	RGATCY	2 cut(s)	342, 1084
MhlI	GDGCHC	5 cut(s)	377, 451, 716, 1101, 1218
MlsI	TGGCCA	1 cut(s)	968
MluCI	AATT	8 cut(s)	253, 612, 637, 653, 845, 1147, 1283, 1587
MluNI	TGGCCA	1 cut(s)	968
MlyI	GAGTC	3 cut(s)	451, 536, 1299
Mox20I	TGGCCA	1 cut(s)	968
Mph1103I	ATGCAT	4 cut(s)	67, 224, 385, 1281
MscI	TGGCCA	1 cut(s)	968
MseI	TTAA	1 cut(s)	1337
MslI	CAYNNNNRTG	4 cut(s)	423, 1223, 1446, 1668
Msp20I	TGGCCA	1 cut(s)	968
MspA1I	CMGCKG	3 cut(s)	56, 463, 989
MspR9I	CCNGG	4 cut(s)	88, 486, 709, 787
MunI	CAATTG	1 cut(s)	612
Mva1269I	GAATGC	2 cut(s)	224, 383
MvaI	CCWGG	4 cut(s)	88, 486, 709, 787
MwoI	GCNNNNNNNGC	8 cut(s)	62, 441, 591, 787, 916, 1553, 1556, 1562
NcoI	CCATGG	1 cut(s)	418
NlaIV	GGNNCC	3 cut(s)	76, 108, 493
NmuCI	GTSAC	1 cut(s)	427
NsbI	TGCGCA	1 cut(s)	301
NsiI	ATGCAT	4 cut(s)	67, 224, 385, 1281
NspI	RCATGY	2 cut(s)	69, 634
PaqCI	CACCTGC	1 cut(s)	440
PceI	AGGCCT	1 cut(s)	1603
PcsI	WCGNNNNNNNCGW	1 cut(s)	120
PctI	GAATGC	2 cut(s)	224, 383
PfeI	GAWTC	2 cut(s)	239, 1141
PflMI	CCANNNNNTGG	2 cut(s)	488, 1592
PfoI	TCCNGGA	1 cut(s)	86
PleI	GAGTC	3 cut(s)	451, 536, 1299
PpsI	GAGTC	3 cut(s)	451, 536, 1299
Psp6I	CCWGG	4 cut(s)	86, 484, 707, 785
PspFI	CCCAGC	2 cut(s)	1044, 1565
PspGI	CCWGG	4 cut(s)	86, 484, 707, 785
PspN4I	GGNNCC	3 cut(s)	76, 108, 493
PspPI	GGNCC	5 cut(s)	106, 367, 896, 1583, 1656
PstNI	CAGNNNCTG	2 cut(s)	992, 1562
PsuI	RGATCY	2 cut(s)	342, 1084
PvuII	CAGCTG	3 cut(s)	56, 463, 989
RsaI	GTAC	2 cut(s)	267, 682
RsaNI	GTAC	2 cut(s)	266, 681
RseI	CAYNNNNRTG	4 cut(s)	423, 1223, 1446, 1668
SalI	GTCGAC	1 cut(s)	1437
SaqAI	TTAA	1 cut(s)	1337
Sau96I	GGNCC	5 cut(s)	106, 367, 896, 1583, 1656
ScaI	AGTACT	1 cut(s)	682
SchI	GAGTC	3 cut(s)	451, 536, 1299
ScrFI	CCNGG	4 cut(s)	88, 486, 709, 787
SduI	GDGCHC	5 cut(s)	377, 451, 716, 1101, 1218
SexAI	ACCWGGT	1 cut(s)	484
SfaNI	GCATC	5 cut(s)	408, 570, 1164, 1171, 1237
SfcI	CTRYAG	3 cut(s)	546, 754, 1675
SinI	GGWCC	3 cut(s)	106, 896, 1583
SmiMI	CAYNNNNRTG	4 cut(s)	423, 1223, 1446, 1668
SmlI	CTYRAG	4 cut(s)	904, 914, 1100, 1426
SmoI	CTYRAG	4 cut(s)	904, 914, 1100, 1426
Sse9I	AATT	8 cut(s)	253, 612, 637, 653, 845, 1147, 1283, 1587
SseBI	AGGCCT	1 cut(s)	1603
SsiI	CCGC	6 cut(s)	32, 415, 469, 559, 1060, 1581
SspI	AATATT	1 cut(s)	1540
SspMI	CTAG	6 cut(s)	311, 662, 678, 885, 1605, 1647
StuI	AGGCCT	1 cut(s)	1603
StyD4I	CCNGG	4 cut(s)	86, 484, 707, 785
StyI	CCWWGG	1 cut(s)	418
TaaI	ACNGT	3 cut(s)	705, 1529, 1619
TaiI	ACGT	1 cut(s)	1215
TaqI	TCGA	3 cut(s)	123, 1183, 1438
TasI	AATT	8 cut(s)	253, 612, 637, 653, 845, 1147, 1283, 1587
TatI	WGTACW	1 cut(s)	680
TauI	GCSGC	1 cut(s)	35
TfiI	GAWTC	2 cut(s)	239, 1141
Tru1I	TTAA	1 cut(s)	1337
Tru9I	TTAA	1 cut(s)	1337
TscAI	CASTG	5 cut(s)	145, 377, 926, 1095, 1230
TseFI	GTSAC	1 cut(s)	427
Tsp45I	GTSAC	1 cut(s)	427
TspDTI	ATGAA	2 cut(s)	1226, 1296
TspGWI	ACGGA	5 cut(s)	251, 355, 909, 1367, 1413
TspRI	CASTG	5 cut(s)	145, 377, 926, 1095, 1230
Van91I	CCANNNNNTGG	2 cut(s)	488, 1592
VneI	GTGCAC	1 cut(s)	712
VpaK11BI	GGWCC	3 cut(s)	106, 896, 1583
XapI	RAATTY	2 cut(s)	1147, 1283
XbaI	TCTAGA	1 cut(s)	310
XceI	RCATGY	2 cut(s)	69, 634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	43
XmiI	GTMKAC	2 cut(s)	1134, 1438
XspI	CTAG	6 cut(s)	311, 662, 678, 885, 1605, 1647
ZrmI	AGTACT	1 cut(s)	682
Zsp2I	ATGCAT	4 cut(s)	67, 224, 385, 1281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.