Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003087

Physical Location & Seq

Genomic Coordinates Reverse (-)

99636 .. 104454

Gene Structure 4819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0001300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGATGGTGAGGAATGTGGTGATGCTCATGCTCTTTGTAACAGTGATTGCTCCCATTATTCTTTACACCGATCGTCTTGGCTCCATTCACACCTCCTCCTCTTCCTCCTCAGCCCAAGACGAATTTGCTCAAGATGTTACTGCTTTCCCTTTCAATGCTCAAACTGGCCGTCTAAATCTGCTTCCCCAGGAATTATCCACCCTCAAAGAACCCATTGGAGTCGTATACTCCGACAACTCTACTAAGTCACTTCCAGAGACAAAGGAGAGCGAAGCCAGCACCAATCACTCCCACCAAGTATCCGCTAGAGTGTTGTCTACCACCACCAACGAACAAGATCTATCTCAAAAAAAAGACAACCCCATCGTACAGGTCACTCAAACACTTGAGCAAGGAAACCAACTTCTGGCCGACTCGGGTGCTAAACCAGCAACTTCTGAGCAGAATACTAATAATGCCTCGCAGAATACGCTTGACCAGCAATCCACCCAAACCTCCGTCAAGGTTGATCAAAGAAAATCTGTCAAAACTATATCAGAAAAAAATAATCATGAAACGACTATTCCGGATGGTCGAGTAAGACATCTGAAAGATCAGCTCATCAGGGCAAAGGTCTACCTATCTCTTCCAGCTACAAGAAACAATCCCCATTTCACAAGGGAGATTCGACTGCGGATAAAGGAAGTTCAGCGAGCACTTGCGGATGCAAGCAAGGATTCTGACCTGCCAAGGAATGCGAATGATAAGTTGAAGGCAATGGAACAGACATTGGCTAAAGGAAAGCAGATTCAAGACGACTGCGCTGCTATGGTGAAAAAGCTTCGAGCTATGCTCCATTCGATGGACGAGCAACTCCGGGTCCACAAGAAGCAGACTATGTTCTTAACGCAGTTAACAGCAAAAACAGTTCCTAAGGGACTTCACTGTCTTCCCTTGCGCCTCACCACTGAATACTATTCCTTAAATTCTTCTCAAAGGAACTTTCCTAATCAAGAGAGATTAGAAGATCCCCTGCTGTACCACTATGCACTCTTCTCAGACAATGTATTGGCAGCGGCAGTTGTCGTAAACTCAACTGTTACCCATGCTAAGGACCCTGCAAACCATGTTTTCCACATTGTCACTGACAGGCTAAATTATGCTGCGATGAGAATGTGGTTTTTGGTGAATCCACCCGGCAAAGCCACTATTCAGGTTCAAAATATTGAAGAGTTTACATGGTTGAATTCAAGTTACAGTCCTGTTCTGAAGCAGTTGGGTTCTGCATCCATGATAGATTATTACTTTAGGACTCATCGCTCCAATTCTGATTCAAATTTGAAGTTCCGAAACCCAAAGTACTTGTCTATCCTGAACCATCTCCGGTTTTACCTTCCGGAGATCTTCCCAAAGCTCAACAAAGTGCTGTTCTTGGATGATGATATAGTTGTGCAGAAGGATCTTACAGGGCTCTGGTCCCTTGATTTGAAGGGAAATGTTAATGGGGCCGTAGAGACTTGTGGAGAAAGCTTCCATCGCTTTGACCGGTATCTTAACTTTTCAAATCCTCTTATCTCAAAGAATTTTGACCCTCATGCTTGTGGATGGGCATATGGAATGAATGTCTTTGATTTGGAGCAATGGAAGAAGCAAAACATCACAGAGTTATACCACAGATGGCAGAAGCTGAATCATGATAGACAGTTGTGGAAGTTGGGAACGCTACCACCTGGTCTCATAACTTTTTGGAAACGCACATATCCACTTGATCGTTCGTGGCATGTGCTGGGGCTTGGTTATAACCCTAGTGTTAACCAGAAGGAGATTGATCGAGCAGCTGTTATACACTATAATGGCAACATGAAACCATGGCTTGAGATAGGTATACCCAAATACAGAAATTACTGGGCAAAATATGTTGATTATGATCACATGTATATGCGAGAATGCAACATCAATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009908 GO:0010093 GO:0010097 GO:0022414 GO:0032501 GO:0032502 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K-box SRF-TF

Protein Analysis

647

Amino Acids

74.24

Weight (kDa)

9.14

Isoelectric Point (pI)

38.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAUT_1	PF25557	190 - 264	3.6e-30	Galacturonosyltransferase domain 1
Glyco_transf_8	PF01501	310 - 620	2.8e-85	Glycosyl transferase family 8
Glyco_transf_24	PF18404	388 - 560	3e-07	Glucosyltransferase 24

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18960 AT4G18960 AT4G18960 AT4G18960
fragaria_vesca	FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720 FvH4_3g06720
malus_domestica	MD05G1293700.v1.1 MD10G1271000.v1.1
prunus_persica	Prupe.3G111300_v2.0.a1 Prupe.4G070500_v2.0.a1 Prupe.4G070500_v2.0.a1 Prupe.4G070500_v2.0.a1 Prupe.4G070500_v2.0.a1
pyrus_communis	pycom05g27100 pycom10g22680
rosa_chinensis	RchiOBHm_Chr5g0012431
rosa_laevigata	RLG00000031913
rosa_multiflora	Rmu_sc0003469.1_g000006 Rmu_sc0003469.1_g000007
rosa_roxburghii	Rroxscaffold_1G00064240
rosa_rugosa	Rorug05G0000900 Rorug05G0001000 Rorug05G0001100 Rorug05G0001200 Rorug05G0001300 Rorug05G0001300 Rorug05G0001400
rosa_samantha	Rh5AG095600 Rh5BG091800 Rh5CG104600 Rh5DG091200
rosa_wichuraiana	Rw5G008360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1779
AasI	GACNNNNNNGTC	1 cut(s)	924
Acc36I	ACCTGC	1 cut(s)	732
AccB7I	CCANNNNNTGG	2 cut(s)	406, 841
AccI	GTMKAC	4 cut(s)	225, 317, 615, 1864
AccIII	TCCGGA	2 cut(s)	565, 1375
AciI	CCGC	4 cut(s)	303, 673, 701, 1055
AclWI	GGATC	2 cut(s)	1001, 1446
AcoI	YGGCCR	2 cut(s)	166, 408
AcsI	RAATTY	5 cut(s)	122, 964, 1225, 1315, 1561
AcuI	CTGAAG	1 cut(s)	1268
AfaI	GTAC	3 cut(s)	369, 1019, 1340
AfiI	CCNNNNNNNGG	3 cut(s)	406, 841, 1090
AflIII	ACRYGT	1 cut(s)	1911
AgeI	ACCGGT	1 cut(s)	1524
AjnI	CCWGG	2 cut(s)	186, 1708
AluBI	AGCT	8 cut(s)	598, 632, 820, 827, 1393, 1509, 1666, 1817
AluI	AGCT	8 cut(s)	598, 632, 820, 827, 1393, 1509, 1666, 1817
Alw21I	GWGCWC	1 cut(s)	697
Alw26I	GTCTC	3 cut(s)	251, 1487, 1718
AlwI	GGATC	2 cut(s)	1001, 1446
AlwNI	CAGNNNCTG	1 cut(s)	1666
Ama87I	CYCGRG	1 cut(s)	415
Aor13HI	TCCGGA	2 cut(s)	565, 1375
AoxI	GGCC	3 cut(s)	166, 408, 1485
ApeKI	GCWGC	4 cut(s)	803, 1052, 1142, 1814
ApoI	RAATTY	5 cut(s)	122, 964, 1225, 1315, 1561
ArsI	GACNNNNNNTTYG	4 cut(s)	154, 186, 1328, 1360
AsiGI	ACCGGT	1 cut(s)	1524
AspLEI	GCGC	2 cut(s)	803, 939
AspS9I	GGNCC	4 cut(s)	859, 1093, 1455, 1485
AsuC2I	CCSGG	2 cut(s)	857, 1176
AsuHPI	GGTGA	5 cut(s)	19, 31, 823, 934, 1177
AvaI	CYCGRG	1 cut(s)	415
AvaII	GGWCC	3 cut(s)	859, 1093, 1455
AxyI	CCTNAGG	1 cut(s)	912
BanII	GRGCYC	1 cut(s)	1452
BbsI	GAAGAC	1 cut(s)	920
Bbv12I	GWGCWC	1 cut(s)	697
BbvCI	CCTCAGC	1 cut(s)	109
BbvI	GCAGC	4 cut(s)	790, 1064, 1129, 1826
BccI	CCATC	7 cut(s)	371, 563, 835, 1365, 1521, 1578, 1650
BceAI	ACGGC	2 cut(s)	153, 1472
BcgI	CGANNNNNNTGC	4 cut(s)	401, 435, 785, 819
BciT130I	CCWGG	2 cut(s)	188, 1710
BciVI	GTATCC	1 cut(s)	310
BclI	TGATCA	2 cut(s)	508, 1906
BcnI	CCSGG	2 cut(s)	857, 1176
BcoDI	GTCTC	3 cut(s)	251, 1487, 1718
BfaI	CTAG	2 cut(s)	306, 1785
BfuAI	ACCTGC	1 cut(s)	732
BfuI	GTATCC	1 cut(s)	310
BglII	AGATCT	2 cut(s)	337, 1380
BisI	GCNGC	5 cut(s)	804, 1053, 1056, 1143, 1815
BlsI	GCNGC	5 cut(s)	805, 1054, 1057, 1144, 1816
BmcAI	AGTACT	1 cut(s)	1340
Bme1390I	CCNGG	4 cut(s)	188, 857, 1176, 1710
Bme18I	GGWCC	3 cut(s)	859, 1093, 1455
BmeT110I	CYCGRG	1 cut(s)	415
BmgT120I	GGNCC	4 cut(s)	859, 1093, 1455, 1485
BmiI	GGNNCC	5 cut(s)	82, 860, 1095, 1457, 1486
BmrFI	CCNGG	4 cut(s)	188, 857, 1176, 1710
BmrI	ACTGGG	1 cut(s)	1894
BmsI	GCATC	3 cut(s)	12, 694, 1274
BmuI	ACTGGG	1 cut(s)	1894
BpiI	GAAGAC	1 cut(s)	920
BplI	GAGNNNNNCTC	2 cut(s)	816, 848
Bpu10I	CCTNAGC	2 cut(s)	109, 1089
BpuEI	CTTGAG	3 cut(s)	114, 407, 1874
BpuMI	CCSGG	2 cut(s)	857, 1176
BsaBI	GATNNNNATC	1 cut(s)	1905
BsaI	GGTCTC	1 cut(s)	1718
BsaJI	CCNNGG	3 cut(s)	186, 728, 1847
BsaWI	WCCGGW	4 cut(s)	565, 1362, 1375, 1524
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	3 cut(s)	406, 841, 1090
Bse118I	RCCGGY	1 cut(s)	1524
Bse1I	ACTGG	2 cut(s)	169, 1889
Bse21I	CCTNAGG	1 cut(s)	912
Bse3DI	GCAATG	2 cut(s)	762, 1625
Bse8I	GATNNNNATC	1 cut(s)	1905
BseAI	TCCGGA	2 cut(s)	565, 1375
BseBI	CCWGG	2 cut(s)	188, 1710
BseDI	CCNNGG	3 cut(s)	186, 728, 1847
BseGI	GGATG	5 cut(s)	574, 709, 1265, 1420, 1589
BseJI	GATNNNNATC	1 cut(s)	1905
BseLI	CCNNNNNNNGG	3 cut(s)	406, 841, 1090
BseMI	GCAATG	2 cut(s)	762, 1625
BseMII	CTCAG	3 cut(s)	123, 429, 1050
BseNI	ACTGG	2 cut(s)	169, 1889
BseRI	GAGGAG	3 cut(s)	85, 88, 97
BseXI	GCAGC	4 cut(s)	790, 1064, 1129, 1826
BseYI	CCCAGC	1 cut(s)	1765
BsgI	GTGCAG	1 cut(s)	1451
Bsh1285I	CGRYCG	1 cut(s)	73
BshFI	GGCC	3 cut(s)	168, 410, 1487
BshTI	ACCGGT	1 cut(s)	1524
BsiEI	CGRYCG	1 cut(s)	73
BsiHKAI	GWGCWC	1 cut(s)	697
BsiHKCI	CYCGRG	1 cut(s)	415
BsiSI	CCGG	6 cut(s)	566, 856, 1176, 1363, 1376, 1525
BslFI	GGGAC	2 cut(s)	930, 1441
BslI	CCNNNNNNNGG	3 cut(s)	406, 841, 1090
BsmAI	GTCTC	3 cut(s)	251, 1487, 1718
BsmFI	GGGAC	2 cut(s)	930, 1441
BsmI	GAATGC	2 cut(s)	739, 1931
BsnI	GGCC	3 cut(s)	168, 410, 1487
Bso31I	GGTCTC	1 cut(s)	1718
BsoBI	CYCGRG	1 cut(s)	415
Bsp1286I	GDGCHC	2 cut(s)	697, 1452
Bsp13I	TCCGGA	2 cut(s)	565, 1375
Bsp19I	CCATGG	1 cut(s)	1847
BspACI	CCGC	4 cut(s)	303, 673, 701, 1055
BspANI	GGCC	3 cut(s)	168, 410, 1487
BspCNI	CTCAG	3 cut(s)	122, 430, 1049
BspEI	TCCGGA	2 cut(s)	565, 1375
BspHI	TCATGA	2 cut(s)	550, 1672
BspLI	GGNNCC	5 cut(s)	82, 860, 1095, 1457, 1486
BspMI	ACCTGC	1 cut(s)	732
BspPI	GGATC	2 cut(s)	1001, 1446
BspTNI	GGTCTC	1 cut(s)	1718
BsrDI	GCAATG	2 cut(s)	762, 1625
BsrFI	RCCGGY	1 cut(s)	1524
BsrI	ACTGG	2 cut(s)	169, 1889
BssAI	RCCGGY	1 cut(s)	1524
BssECI	CCNNGG	3 cut(s)	186, 728, 1847
BssNAI	GTATAC	2 cut(s)	226, 1865
BssT1I	CCWWGG	2 cut(s)	728, 1847
Bst1107I	GTATAC	2 cut(s)	226, 1865
Bst2UI	CCWGG	2 cut(s)	188, 1710
Bst4CI	ACNGT	6 cut(s)	43, 907, 926, 1078, 1238, 1683
Bst6I	CTCTTC	4 cut(s)	106, 630, 1037, 1203
BstC8I	GCNNGC	3 cut(s)	277, 693, 709
BstDEI	CTNAG	6 cut(s)	109, 243, 438, 912, 1036, 1089
BstDSI	CCRYGG	1 cut(s)	1847
BstF5I	GGATG	5 cut(s)	574, 709, 1265, 1420, 1589
BstHHI	GCGC	2 cut(s)	803, 939
BstMAI	GTCTC	3 cut(s)	251, 1487, 1718
BstMCI	CGRYCG	1 cut(s)	73
BstMWI	GCNNNNNNNGC	5 cut(s)	276, 428, 469, 478, 1515
BstNI	CCWGG	2 cut(s)	188, 1710
BstNSI	RCATGY	2 cut(s)	1763, 1915
BstSCI	CCNGG	4 cut(s)	186, 855, 1174, 1708
BstV1I	GCAGC	4 cut(s)	790, 1064, 1129, 1826
BstV2I	GAAGAC	1 cut(s)	920
BstX2I	RGATCY	4 cut(s)	337, 1006, 1380, 1438
BstYI	RGATCY	4 cut(s)	337, 1006, 1380, 1438
BstZ17I	GTATAC	2 cut(s)	226, 1865
Bsu36I	CCTNAGG	1 cut(s)	912
BsuI	GTATCC	1 cut(s)	310
BsuRI	GGCC	3 cut(s)	168, 410, 1487
BtgI	CCRYGG	1 cut(s)	1847
BtgZI	GCGATG	3 cut(s)	1160, 1280, 1499
BtsCI	GGATG	5 cut(s)	574, 709, 1265, 1420, 1589
BtsIMutI	CAGTG	4 cut(s)	48, 922, 945, 1122
BveI	ACCTGC	1 cut(s)	732
Cac8I	GCNNGC	3 cut(s)	277, 693, 709
CaiI	CAGNNNCTG	1 cut(s)	1666
CciI	TCATGA	2 cut(s)	550, 1672
CfoI	GCGC	2 cut(s)	803, 939
Cfr10I	RCCGGY	1 cut(s)	1524
Cfr13I	GGNCC	4 cut(s)	859, 1093, 1455, 1485
CsiI	ACCWGGT	1 cut(s)	1708
Csp6I	GTAC	3 cut(s)	368, 1018, 1339
CspAI	ACCGGT	1 cut(s)	1524
CviQI	GTAC	3 cut(s)	368, 1018, 1339
DdeI	CTNAG	6 cut(s)	109, 243, 438, 912, 1036, 1089
DrdI	GACNNNNNNGTC	1 cut(s)	924
DseDI	GACNNNNNNGTC	1 cut(s)	924
EaeI	YGGCCR	2 cut(s)	166, 408
Eam1104I	CTCTTC	4 cut(s)	106, 630, 1037, 1203
EarI	CTCTTC	4 cut(s)	106, 630, 1037, 1203
Eco130I	CCWWGG	2 cut(s)	728, 1847
Eco24I	GRGCYC	1 cut(s)	1452
Eco31I	GGTCTC	1 cut(s)	1718
Eco47I	GGWCC	3 cut(s)	859, 1093, 1455
Eco57I	CTGAAG	1 cut(s)	1268
Eco81I	CCTNAGG	1 cut(s)	912
Eco88I	CYCGRG	1 cut(s)	415
EcoO109I	RGGNCCY	1 cut(s)	1093
EcoRI	GAATTC	1 cut(s)	1225
EcoRII	CCWGG	2 cut(s)	186, 1708
EcoT14I	CCWWGG	2 cut(s)	728, 1847
EcoT38I	GRGCYC	1 cut(s)	1452
ErhI	CCWWGG	2 cut(s)	728, 1847
FaqI	GGGAC	2 cut(s)	930, 1441
FauNDI	CATATG	1 cut(s)	1591
FbaI	TGATCA	2 cut(s)	508, 1906
FblI	GTMKAC	4 cut(s)	225, 317, 615, 1864
Fnu4HI	GCNGC	5 cut(s)	804, 1053, 1056, 1143, 1815
FokI	GGATG	5 cut(s)	581, 716, 1252, 1427, 1596
FriOI	GRGCYC	1 cut(s)	1452
Fsp4HI	GCNGC	5 cut(s)	804, 1053, 1056, 1143, 1815
FspBI	CTAG	2 cut(s)	306, 1785
GlaI	GCGC	2 cut(s)	802, 938
GluI	GCNGC	5 cut(s)	804, 1053, 1056, 1143, 1815
GsaI	CCCAGC	1 cut(s)	1769
HaeIII	GGCC	3 cut(s)	168, 410, 1487
HapII	CCGG	6 cut(s)	566, 856, 1176, 1363, 1376, 1525
HhaI	GCGC	2 cut(s)	803, 939
Hin6I	GCGC	2 cut(s)	801, 937
HinP1I	GCGC	2 cut(s)	801, 937
HincII	GTYRAC	2 cut(s)	894, 1792
HindII	GTYRAC	2 cut(s)	894, 1792
HindIII	AAGCTT	2 cut(s)	818, 1507
HinfI	GANTC	9 cut(s)	219, 413, 664, 716, 787, 1168, 1291, 1310, 1669
HpaI	GTTAAC	2 cut(s)	894, 1792
HpaII	CCGG	6 cut(s)	566, 856, 1176, 1363, 1376, 1525
HphI	GGTGA	5 cut(s)	19, 31, 823, 934, 1177
Hpy166II	GTNNAC	9 cut(s)	226, 318, 616, 862, 894, 1069, 1215, 1792, 1865
Hpy188I	TCNGA	9 cut(s)	232, 439, 538, 588, 721, 1039, 1248, 1309, 1328
Hpy188III	TCNNGA	9 cut(s)	131, 254, 551, 566, 791, 992, 1351, 1376, 1673
Hpy8I	GTNNAC	9 cut(s)	226, 318, 616, 862, 894, 1069, 1215, 1792, 1865
HpyAV	CCTTC	5 cut(s)	745, 1382, 1429, 1462, 1792
HpyCH4III	ACNGT	6 cut(s)	43, 907, 926, 1078, 1238, 1683
HpyCH4V	TGCA	6 cut(s)	707, 1028, 1100, 1265, 1432, 1929
HpyF10VI	GCNNNNNNNGC	5 cut(s)	276, 428, 469, 478, 1515
HpyF3I	CTNAG	6 cut(s)	109, 243, 438, 912, 1036, 1089
HspAI	GCGC	2 cut(s)	801, 937
Kpn2I	TCCGGA	2 cut(s)	565, 1375
Ksp22I	TGATCA	2 cut(s)	508, 1906
KspAI	GTTAAC	2 cut(s)	894, 1792
LmnI	GCTCC	5 cut(s)	55, 86, 837, 1304, 1615
Lsp1109I	GCAGC	4 cut(s)	790, 1064, 1129, 1826
LweI	GCATC	3 cut(s)	12, 694, 1274
MabI	ACCWGGT	1 cut(s)	1708
MaeI	CTAG	2 cut(s)	306, 1785
MaeIII	GTNAC	7 cut(s)	37, 136, 246, 373, 1078, 1120, 1232
MboII	GAAGA	9 cut(s)	93, 617, 920, 960, 1016, 1024, 1220, 1375, 1636
MflI	RGATCY	4 cut(s)	337, 1006, 1380, 1438
MhlI	GDGCHC	2 cut(s)	697, 1452
MluCI	AATT	9 cut(s)	122, 191, 964, 1135, 1225, 1303, 1315, 1561, 1879
MlyI	GAGTC	3 cut(s)	228, 407, 1285
MmeI	TCCRAC	1 cut(s)	255
MroI	TCCGGA	2 cut(s)	565, 1375
MseI	TTAA	6 cut(s)	884, 893, 962, 1479, 1533, 1791
MslI	CAYNNNNRTG	3 cut(s)	1578, 1830, 1916
MspA1I	CMGCKG	2 cut(s)	1055, 1817
MspI	CCGG	6 cut(s)	566, 856, 1176, 1363, 1376, 1525
MspR9I	CCNGG	4 cut(s)	188, 857, 1176, 1710
Mva1269I	GAATGC	2 cut(s)	739, 1931
MvaI	CCWGG	2 cut(s)	188, 1710
MwoI	GCNNNNNNNGC	5 cut(s)	276, 428, 469, 478, 1515
NciI	CCSGG	2 cut(s)	857, 1176
NcoI	CCATGG	1 cut(s)	1847
NdeI	CATATG	1 cut(s)	1591
NlaIV	GGNNCC	5 cut(s)	82, 860, 1095, 1457, 1486
NmuCI	GTSAC	3 cut(s)	246, 373, 1120
NspI	RCATGY	2 cut(s)	1763, 1915
PagI	TCATGA	2 cut(s)	550, 1672
PciI	ACATGT	1 cut(s)	1911
PcsI	WCGNNNNNNNCGW	1 cut(s)	228
PctI	GAATGC	2 cut(s)	739, 1931
PfeI	GAWTC	6 cut(s)	664, 716, 787, 1168, 1310, 1669
PflMI	CCANNNNNTGG	2 cut(s)	406, 841
PinAI	ACCGGT	1 cut(s)	1524
PkrI	GCNGC	5 cut(s)	805, 1054, 1057, 1144, 1816
Ple19I	CGATCG	1 cut(s)	73
PleI	GAGTC	3 cut(s)	227, 407, 1285
PpsI	GAGTC	3 cut(s)	227, 407, 1285
PpuMI	RGGWCCY	1 cut(s)	1093
PscI	ACATGT	1 cut(s)	1911
PsiI	TTATAA	1 cut(s)	1779
Psp5II	RGGWCCY	1 cut(s)	1093
Psp6I	CCWGG	2 cut(s)	186, 1708
PspFI	CCCAGC	1 cut(s)	1765
PspGI	CCWGG	2 cut(s)	186, 1708
PspN4I	GGNNCC	5 cut(s)	82, 860, 1095, 1457, 1486
PspPI	GGNCC	4 cut(s)	859, 1093, 1455, 1485
PspPPI	RGGWCCY	1 cut(s)	1093
PstNI	CAGNNNCTG	1 cut(s)	1666
PsuI	RGATCY	4 cut(s)	337, 1006, 1380, 1438
PvuI	CGATCG	1 cut(s)	73
PvuII	CAGCTG	1 cut(s)	1817
RsaI	GTAC	3 cut(s)	369, 1019, 1340
RsaNI	GTAC	3 cut(s)	368, 1018, 1339
RseI	CAYNNNNRTG	3 cut(s)	1578, 1830, 1916
SaqAI	TTAA	6 cut(s)	884, 893, 962, 1479, 1533, 1791
SatI	GCNGC	5 cut(s)	804, 1053, 1056, 1143, 1815
Sau96I	GGNCC	4 cut(s)	859, 1093, 1455, 1485
ScaI	AGTACT	1 cut(s)	1340
SchI	GAGTC	3 cut(s)	228, 407, 1285
ScrFI	CCNGG	4 cut(s)	188, 857, 1176, 1710
SduI	GDGCHC	2 cut(s)	697, 1452
SexAI	ACCWGGT	1 cut(s)	1708
SfaNI	GCATC	3 cut(s)	12, 694, 1274
SinI	GGWCC	3 cut(s)	859, 1093, 1455
SmiMI	CAYNNNNRTG	3 cut(s)	1578, 1830, 1916
SmlI	CTYRAG	3 cut(s)	129, 386, 1853
SmoI	CTYRAG	3 cut(s)	129, 386, 1853
Sse9I	AATT	9 cut(s)	122, 191, 964, 1135, 1225, 1303, 1315, 1561, 1879
SsiI	CCGC	4 cut(s)	303, 673, 701, 1055
SspI	AATATT	1 cut(s)	1204
SspMI	CTAG	2 cut(s)	306, 1785
StyD4I	CCNGG	4 cut(s)	186, 855, 1174, 1708
StyI	CCWWGG	2 cut(s)	728, 1847
TaaI	ACNGT	6 cut(s)	43, 907, 926, 1078, 1238, 1683
TaqI	TCGA	5 cut(s)	574, 667, 823, 839, 1810
TasI	AATT	9 cut(s)	122, 191, 964, 1135, 1225, 1303, 1315, 1561, 1879
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	1 cut(s)	1058
TfiI	GAWTC	6 cut(s)	664, 716, 787, 1168, 1310, 1669
Tru1I	TTAA	6 cut(s)	884, 893, 962, 1479, 1533, 1791
Tru9I	TTAA	6 cut(s)	884, 893, 962, 1479, 1533, 1791
TscAI	CASTG	4 cut(s)	48, 929, 952, 1129
TseFI	GTSAC	3 cut(s)	246, 373, 1120
TseI	GCWGC	4 cut(s)	803, 1052, 1142, 1814
Tsp45I	GTSAC	3 cut(s)	246, 373, 1120
TspDTI	ATGAA	3 cut(s)	567, 1613, 1856
TspGWI	ACGGA	1 cut(s)	487
TspRI	CASTG	4 cut(s)	48, 929, 952, 1129
Van91I	CCANNNNNTGG	2 cut(s)	406, 841
VpaK11BI	GGWCC	3 cut(s)	859, 1093, 1455
XapI	RAATTY	5 cut(s)	122, 964, 1225, 1315, 1561
XceI	RCATGY	2 cut(s)	1763, 1915
XmiI	GTMKAC	4 cut(s)	225, 317, 615, 1864
XspI	CTAG	2 cut(s)	306, 1785
ZrmI	AGTACT	1 cut(s)	1340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.