Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005680

Physical Location & Seq

Genomic Coordinates Reverse (-)

47225736 .. 47229202

Gene Structure 3467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0320400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGTCTTCTGCCAGAAATACCATGACCGGCATGGACAGTGAGAGCATCAAGAAATACTTGTTCCAGACAGCCATGAAAAGCCAATGGGAAGAAGTTGTCCGAGCATATAGGCAAAACGAGCGGGCTCACAAGGCAAGGATCACCAAGTCAGGTGACACAGCATTGCACATAGCAGTGTTAGATGGCCAAGAGGAACGTGTTGAAGAACTAGTAAACCTGGTTTCCAAAAATGAGCTGGCGCTGGAAATCCAAAATGAGCGAGGGAACACCCCTCTCCATTTGGCTGCAGCACAGGGGAATGTGAGAATGTGCGAATGCATTGCCAAAGGTCGTGCTTCTTTGGTTGGTATTCTCAACAAAGATAAAGAGACCCCTCTCTTCTTGGCTGCTCTCCATGGTAAAAAAGATGCCTTCTTGTGTCTCCACTACATTTGTACTCCTAAGAATCCTGACAAGTCTCCTCCTAAGAATCCTGACAAGTCTCCTCCTAAGAATCCTGACAAGTCTCCTCCTCAGAGTTCTGACAAGTCTCCTCCAAACTACAATTACTGTAGGAGGGAAGATGGAGAGACTATCTTGCATCGTGCAATTGCTGGGGACTACTTTGATTTGGCATTTCAGATAATAGCACTGTATGAAGGTCTAGTTAATTCTGTTAATGAAGTTGGGTTTTCCCCTCTCCATCTTCTGGCTAGTAAGCCTTCTGCCTTTAAAAGTGGTAGCCACCTTAGACCTTGGAGCATAATCATTTACCACTGTATATTGATCGATGAGCTGAAGGTGGAAGAAGCAGATCACTTCCATGAGCGGGTAATTAAGACAATTAACTCTGAAAAGGCTTCAGAATACCCAGAAAACTATAAAACCTGCATCAACTTCTTGCTAGTGTTCTGGAAGATGGCTAAAGCATTAGTTACTCGTAAAGAAGACGGCCATAGAATGCAGGGAACGAATATTCCTGCAGGAAAAGGATCTACAGATCCAGAGAACCCTGAACCTAAAGGAGGAAATCCAGGTCATTACAATGCCTGCTTTGATTATGTCAAGCTTTTATCAAAGGCAATGCTGATTGTTCTTGGACTAGGGTCTACGGAGATACAGAAGATAAGGAACAAGAAAGAAAAGCACAAATGGGCTGTTCAGATCATGGACAAGCTATTAGAAAAAGCTTTAATGTATGAATATGAAGACAGTGGTATGAACCCGCAGGAAGCAACAACGGATGAAACAAGGCCTTACAAAATTTCTGATGGTGGCCACCATATCACCCTTGGAGACATTCAAGTACCAGAAGGAGTCATTGGAGAAGGGTCAGAAGTGACACAGAATAAAACCCCTTATGAGCTGGAAAAGAAGGAAACACCGATATTGATTGCTGCGAAGAATGGCGTGACTGAAATGGTCGAGAAGATCCTAGAACATTTTCCAGTGGCCATACATGACCTTAATGCACAGAAAAAGAATATAGTTCTGTTGGCTGTGGAGCACAGGCAACCCCATGTGTACCAACTCTTGCTAAAGAGAAAGATCATGAGAGAAAGCGTTTTCTGCAAAGTGGATAAAGATGGCAATAGTGCATTACACCTTGCAGCAAAGTTGGGAGATTACAAGCCTTGGCTAATTCCCGGTGCTGCCTTGCAAATGCAATGGGAAATCAAGTGGCATGAGTTCGTGAAAAACTCAATGCCGTTCCACTTCTTCGTCCGCTACAACCAGAAAAGCCAAACCGCAAGGGACATCTTCACCGAAACCCACACCGAGATCGTTAAAGACGGCGGCAATTGGCTGGCCAACACCTCCCAATCATGCTCCGTCGTCGCCGCCCTCATCGCCACCGTCGCCTTCGCCACCGCATCCACCGTCCCCGGCGGCACAAAAGAGGAAAACGGCAAGCCCACCTTCGAAAACCAGCCGGCGTTCGACGTCTTCAGCATCGCCTCTCTCGTCGCCCTTTGCTTCTCCGTCACGGCAATGGTGATGTTCCTGGCCATTCTGACGTCACGGTATCAGGAGAGGGACTTCGGGAAAGCGCTGCCGAGGAAGCTCCTTTTTGGCCTGACGTCGCTGTTTGTGTCCATCGCTGCGATGCTGGTATCTTTTTGCGCCGGACACTTCTTCGTGCTGAAAGATGAGCTGAAATACGCGGCGTTTCCGGTTTATGCAATAACGTGTTTGCCGGTGTCGTTTTTCGCCATAGCACAGTTTCCGTTGTACGTTGATCTGGTGTGGGCTACGTTTAAGAAGGTGCCGCAGCGGAGTTACAAGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

756

Amino Acids

84.87

Weight (kDa)

8.33

Isoelectric Point (pI)

35.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	75 - 139	4.5e-07	Ankyrin repeats (3 copies)
Ank_2	PF12796	457 - 536	1.1e-06	Ankyrin repeats (3 copies)
PGG	PF13962	594 - 706	7e-28	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20100 AT1G20100 AT1G75860 AT1G75860 AT1G76230
fragaria_vesca	FvH4_2g38160 FvH4_2g38160 FvH4_6g14711
prunus_persica	Prupe.1G362500_v2.0.a1 Prupe.1G362800_v2.0.a1 Prupe.1G362800_v2.0.a1 Prupe.1G362800_v2.0.a1
pyrus_communis	pycom15g00820
rosa_chinensis	RchiOBHm_Chr6g0303321
rosa_laevigata	RLG00000011092 RLG00000024466
rosa_multiflora	Rmu_sc0007252.1_g000006 Rmu_sc0027227.1_g000002
rosa_roxburghii	Rroxscaffold_6G00413280 Rroxscaffold_7G00164870
rosa_rugosa	Rorug06G0320400 Rorug06G0320500
rosa_samantha	Rh6AG434800 Rh6BG468300 Rh6CG446800 Rh6DG433600 Rh6DG433700
rosa_wichuraiana	Rw6G037650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	1926, 2000, 2063
Acc36I	ACCTGC	1 cut(s)	875
AccB1I	GGYRCC	1 cut(s)	2245
AccB7I	CCANNNNNTGG	1 cut(s)	688
AccBSI	CCGCTC	2 cut(s)	121, 808
AccI	GTMKAC	1 cut(s)	1088
AccII	CGCG	1 cut(s)	2144
AclWI	GGATC	4 cut(s)	146, 974, 979, 1405
AcoI	YGGCCR	6 cut(s)	184, 931, 1255, 1431, 1788, 1986
AcsI	RAATTY	1 cut(s)	1242
AcuI	CTGAAG	3 cut(s)	797, 825, 1912
AcyI	GRCGYC	3 cut(s)	1923, 1997, 2060
AfaI	GTAC	4 cut(s)	436, 1287, 1505, 2213
AfeI	AGCGCT	1 cut(s)	2031
AfiI	CCNNNNNNNGG	3 cut(s)	688, 808, 1004
AflIII	ACRYGT	2 cut(s)	196, 2168
AgsI	TTSAA	2 cut(s)	203, 1283
AhlI	ACTAGT	1 cut(s)	208
AjnI	CCWGG	3 cut(s)	216, 1012, 1983
AjuI	GAANNNNNNNTTGG	2 cut(s)	1284, 1316
AloI	GAACNNNNNNTCC	2 cut(s)	940, 972
AluBI	AGCT	8 cut(s)	235, 775, 1048, 1156, 1169, 1345, 2044, 2134
AluI	AGCT	8 cut(s)	235, 775, 1048, 1156, 1169, 1345, 2044, 2134
Alw21I	GWGCWC	1 cut(s)	1488
Alw26I	GTCTC	8 cut(s)	362, 425, 462, 486, 510, 534, 563, 1269
AlwI	GGATC	4 cut(s)	146, 974, 979, 1405
Aor51HI	AGCGCT	1 cut(s)	2031
AoxI	GGCC	8 cut(s)	184, 931, 1232, 1255, 1431, 1788, 1986, 2053
ApeKI	GCWGC	9 cut(s)	284, 287, 386, 1376, 1589, 1631, 2032, 2081, 2251
ApoI	RAATTY	1 cut(s)	1242
Asp700I	GAANNNNTTC	1 cut(s)	1422
AspLEI	GCGC	3 cut(s)	241, 2032, 2105
AsuC2I	CCSGG	2 cut(s)	1626, 1866
AsuHPI	GGTGA	5 cut(s)	133, 164, 1258, 1735, 1987
AsuII	TTCGAA	1 cut(s)	1902
BalI	TGGCCA	5 cut(s)	186, 1257, 1433, 1790, 1988
BanI	GGYRCC	1 cut(s)	2245
BanII	GRGCYC	1 cut(s)	127
BbsI	GAAGAC	3 cut(s)	933, 1194, 1918
Bbv12I	GWGCWC	1 cut(s)	1488
BbvI	GCAGC	9 cut(s)	271, 299, 373, 1363, 1601, 1618, 2019, 2068, 2263
BccI	CCATC	7 cut(s)	176, 557, 690, 892, 1244, 1559, 2084
BceAI	ACGGC	5 cut(s)	946, 1672, 1789, 1903, 1983
BcgI	CGANNNNNNTGC	2 cut(s)	302, 336
BciT130I	CCWGG	3 cut(s)	218, 1014, 1985
BcnI	CCSGG	2 cut(s)	1626, 1866
BcoDI	GTCTC	8 cut(s)	362, 425, 462, 486, 510, 534, 563, 1269
BcuI	ACTAGT	1 cut(s)	208
BfaI	CTAG	6 cut(s)	209, 644, 693, 884, 1082, 1415
BfmI	CTRYAG	4 cut(s)	285, 550, 960, 975
BfoI	RGCGCY	2 cut(s)	242, 2033
BfuAI	ACCTGC	1 cut(s)	875
Bme1390I	CCNGG	5 cut(s)	218, 1014, 1626, 1866, 1985
BmiI	GGNNCC	1 cut(s)	2247
BmrFI	CCNGG	5 cut(s)	218, 1014, 1626, 1866, 1985
BmsI	GCATC	7 cut(s)	54, 397, 589, 879, 1862, 1941, 2076
BoxI	GACNNNNGTC	1 cut(s)	1084
BpiI	GAAGAC	3 cut(s)	933, 1194, 1918
Bpu14I	TTCGAA	1 cut(s)	1902
BpuMI	CCSGG	2 cut(s)	1626, 1866
Bsa29I	ATCGAT	1 cut(s)	768
BsaHI	GRCGYC	3 cut(s)	1923, 1997, 2060
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	6 cut(s)	394, 734, 1270, 1613, 1864, 2036
BsaWI	WCCGGW	1 cut(s)	2152
Bsc4I	CCNNNNNNNGG	3 cut(s)	688, 808, 1004
Bse118I	RCCGGY	3 cut(s)	26, 1912, 2176
Bse1I	ACTGG	1 cut(s)	1427
Bse3DI	GCAATG	5 cut(s)	161, 318, 1068, 1652, 1977
BseBI	CCWGG	3 cut(s)	218, 1014, 1985
BseCI	ATCGAT	1 cut(s)	768
BseDI	CCNNGG	6 cut(s)	394, 734, 1270, 1613, 1864, 2036
BseGI	GGATG	2 cut(s)	1228, 1853
BseLI	CCNNNNNNNGG	3 cut(s)	688, 808, 1004
BseMI	GCAATG	5 cut(s)	161, 318, 1068, 1652, 1977
BseMII	CTCAG	1 cut(s)	527
BseNI	ACTGG	1 cut(s)	1427
BseRI	GAGGAG	5 cut(s)	450, 474, 498, 501, 522
BseXI	GCAGC	9 cut(s)	271, 299, 373, 1363, 1601, 1618, 2019, 2068, 2263
BseYI	CCCAGC	1 cut(s)	593
Bsh1236I	CGCG	1 cut(s)	2144
BshFI	GGCC	8 cut(s)	186, 933, 1234, 1257, 1433, 1790, 1988, 2055
BshNI	GGYRCC	1 cut(s)	2245
BshVI	ATCGAT	1 cut(s)	768
BsiHKAI	GWGCWC	1 cut(s)	1488
BsiSI	CCGG	7 cut(s)	27, 1626, 1866, 1913, 2106, 2153, 2177
BslFI	GGGAC	4 cut(s)	611, 1748, 1847, 2030
BslI	CCNNNNNNNGG	3 cut(s)	688, 808, 1004
BsmAI	GTCTC	8 cut(s)	362, 425, 462, 486, 510, 534, 563, 1269
BsmFI	GGGAC	4 cut(s)	611, 1748, 1847, 2030
BsmI	GAATGC	2 cut(s)	320, 945
BsnI	GGCC	8 cut(s)	186, 933, 1234, 1257, 1433, 1790, 1988, 2055
Bso31I	GGTCTC	1 cut(s)	362
Bsp119I	TTCGAA	1 cut(s)	1902
Bsp1286I	GDGCHC	2 cut(s)	127, 1488
Bsp19I	CCATGG	1 cut(s)	394
BspANI	GGCC	8 cut(s)	186, 933, 1234, 1257, 1433, 1790, 1988, 2055
BspCNI	CTCAG	1 cut(s)	526
BspDI	ATCGAT	1 cut(s)	768
BspFNI	CGCG	1 cut(s)	2144
BspHI	TCATGA	1 cut(s)	1530
BspLI	GGNNCC	1 cut(s)	2247
BspMAI	CTGCAG	2 cut(s)	289, 964
BspMI	ACCTGC	1 cut(s)	875
BspPI	GGATC	4 cut(s)	146, 974, 979, 1405
BspT104I	TTCGAA	1 cut(s)	1902
BspT107I	GGYRCC	1 cut(s)	2245
BspTNI	GGTCTC	1 cut(s)	362
BsrBI	CCGCTC	2 cut(s)	121, 808
BsrDI	GCAATG	5 cut(s)	161, 318, 1068, 1652, 1977
BsrFI	RCCGGY	3 cut(s)	26, 1912, 2176
BsrI	ACTGG	1 cut(s)	1427
BssAI	RCCGGY	3 cut(s)	26, 1912, 2176
BssECI	CCNNGG	6 cut(s)	394, 734, 1270, 1613, 1864, 2036
BssNI	GRCGYC	3 cut(s)	1923, 1997, 2060
BssT1I	CCWWGG	4 cut(s)	394, 734, 1270, 1613
Bst2UI	CCWGG	3 cut(s)	218, 1014, 1985
Bst4CI	ACNGT	9 cut(s)	38, 551, 633, 758, 1193, 1837, 1861, 2004, 2202
Bst6I	CTCTTC	1 cut(s)	383
BstACI	GRCGYC	3 cut(s)	1923, 1997, 2060
BstBI	TTCGAA	1 cut(s)	1902
BstC8I	GCNNGC	6 cut(s)	123, 237, 1030, 1788, 1892, 1914
BstDEI	CTNAG	5 cut(s)	441, 465, 489, 513, 728
BstDSI	CCRYGG	1 cut(s)	394
BstENI	CCTNNNNNAGG	1 cut(s)	1002
BstF5I	GGATG	2 cut(s)	1228, 1853
BstFNI	CGCG	1 cut(s)	2144
BstH2I	RGCGCY	2 cut(s)	242, 2033
BstHHI	GCGC	3 cut(s)	241, 2032, 2105
BstMAI	GTCTC	8 cut(s)	362, 425, 462, 486, 510, 534, 563, 1269
BstMWI	GCNNNNNNNGC	6 cut(s)	118, 131, 1548, 1829, 1838, 2041
BstNI	CCWGG	3 cut(s)	218, 1014, 1985
BstPAI	GACNNNNGTC	1 cut(s)	1084
BstSCI	CCNGG	5 cut(s)	216, 1012, 1624, 1864, 1983
BstSFI	CTRYAG	4 cut(s)	285, 550, 960, 975
BstUI	CGCG	1 cut(s)	2144
BstV1I	GCAGC	9 cut(s)	271, 299, 373, 1363, 1601, 1618, 2019, 2068, 2263
BstV2I	GAAGAC	3 cut(s)	933, 1194, 1918
BstX2I	RGATCY	3 cut(s)	971, 979, 1410
BstYI	RGATCY	3 cut(s)	971, 979, 1410
Bsu15I	ATCGAT	1 cut(s)	768
BsuRI	GGCC	8 cut(s)	186, 933, 1234, 1257, 1433, 1790, 1988, 2055
BsuTUI	ATCGAT	1 cut(s)	768
BtgI	CCRYGG	1 cut(s)	394
BtgZI	GCGATG	4 cut(s)	1813, 1918, 2062, 2099
BtsCI	GGATG	2 cut(s)	1228, 1853
BtsI	GCAGTG	1 cut(s)	180
BtsIMutI	CAGTG	6 cut(s)	43, 180, 629, 754, 1198, 1434
BveI	ACCTGC	1 cut(s)	875
Cac8I	GCNNGC	6 cut(s)	123, 237, 1030, 1788, 1892, 1914
CciI	TCATGA	1 cut(s)	1530
CfoI	GCGC	3 cut(s)	241, 2032, 2105
Cfr10I	RCCGGY	3 cut(s)	26, 1912, 2176
ClaI	ATCGAT	1 cut(s)	768
CsiI	ACCWGGT	1 cut(s)	216
Csp6I	GTAC	4 cut(s)	435, 1286, 1504, 2212
CspCI	CAANNNNNGTGG	2 cut(s)	413, 448
CviQI	GTAC	4 cut(s)	435, 1286, 1504, 2212
DdeI	CTNAG	5 cut(s)	441, 465, 489, 513, 728
DraI	TTTAAA	1 cut(s)	712
EaeI	YGGCCR	6 cut(s)	184, 931, 1255, 1431, 1788, 1986
Eam1104I	CTCTTC	1 cut(s)	383
EarI	CTCTTC	1 cut(s)	383
Eco130I	CCWWGG	4 cut(s)	394, 734, 1270, 1613
Eco147I	AGGCCT	1 cut(s)	1234
Eco24I	GRGCYC	1 cut(s)	127
Eco31I	GGTCTC	1 cut(s)	362
Eco47III	AGCGCT	1 cut(s)	2031
Eco57I	CTGAAG	3 cut(s)	797, 825, 1912
EcoNI	CCTNNNNNAGG	1 cut(s)	1002
EcoRII	CCWGG	3 cut(s)	216, 1012, 1983
EcoT14I	CCWWGG	4 cut(s)	394, 734, 1270, 1613
EcoT22I	ATGCAT	1 cut(s)	320
EcoT38I	GRGCYC	1 cut(s)	127
ErhI	CCWWGG	4 cut(s)	394, 734, 1270, 1613
FalI	AAGNNNNNCTT	4 cut(s)	41, 73, 1883, 1915
FaqI	GGGAC	4 cut(s)	611, 1748, 1847, 2030
FauI	CCCGC	3 cut(s)	114, 801, 1212
FblI	GTMKAC	1 cut(s)	1088
FokI	GGATG	2 cut(s)	1235, 1840
FriOI	GRGCYC	1 cut(s)	127
FspBI	CTAG	6 cut(s)	209, 644, 693, 884, 1082, 1415
GlaI	GCGC	3 cut(s)	240, 2031, 2104
GsaI	CCCAGC	1 cut(s)	597
HaeII	RGCGCY	2 cut(s)	242, 2033
HaeIII	GGCC	8 cut(s)	186, 933, 1234, 1257, 1433, 1790, 1988, 2055
HapII	CCGG	7 cut(s)	27, 1626, 1866, 1913, 2106, 2153, 2177
HhaI	GCGC	3 cut(s)	241, 2032, 2105
Hin1I	GRCGYC	3 cut(s)	1923, 1997, 2060
Hin6I	GCGC	3 cut(s)	239, 2030, 2103
HinP1I	GCGC	3 cut(s)	239, 2030, 2103
HindIII	AAGCTT	2 cut(s)	1046, 1167
HinfI	GANTC	4 cut(s)	445, 469, 493, 1296
HpaII	CCGG	7 cut(s)	27, 1626, 1866, 1913, 2106, 2153, 2177
HphI	GGTGA	5 cut(s)	133, 164, 1258, 1735, 1987
Hpy166II	GTNNAC	3 cut(s)	214, 1089, 1504
Hpy8I	GTNNAC	3 cut(s)	214, 1089, 1504
Hpy99I	CGWCG	6 cut(s)	1817, 1820, 1841, 1925, 1949, 2065
HpyCH4III	ACNGT	9 cut(s)	38, 551, 633, 758, 1193, 1837, 1861, 2004, 2202
HpyCH4IV	ACGT	7 cut(s)	196, 1923, 1997, 2060, 2168, 2214, 2234
HpyF10VI	GCNNNNNNNGC	6 cut(s)	118, 131, 1548, 1829, 1838, 2041
HpyF3I	CTNAG	5 cut(s)	441, 465, 489, 513, 728
HpySE526I	ACGT	7 cut(s)	196, 1923, 1997, 2060, 2168, 2214, 2234
Hsp92I	GRCGYC	3 cut(s)	1923, 1997, 2060
HspAI	GCGC	3 cut(s)	239, 2030, 2103
KroI	GCCGGC	1 cut(s)	1912
KroNI	GCCGGC	1 cut(s)	1914
LmnI	GCTCC	4 cut(s)	738, 1483, 1814, 2049
Lsp1109I	GCAGC	9 cut(s)	271, 299, 373, 1363, 1601, 1618, 2019, 2068, 2263
LweI	GCATC	7 cut(s)	54, 397, 589, 879, 1862, 1941, 2076
MabI	ACCWGGT	1 cut(s)	216
MaeI	CTAG	6 cut(s)	209, 644, 693, 884, 1082, 1415
MaeII	ACGT	7 cut(s)	196, 1923, 1997, 2060, 2168, 2214, 2234
MaeIII	GTNAC	7 cut(s)	152, 913, 1318, 1390, 1963, 1998, 2258
MbiI	CCGCTC	2 cut(s)	121, 808
MfeI	CAATTG	2 cut(s)	588, 1780
MflI	RGATCY	3 cut(s)	971, 979, 1410
MhlI	GDGCHC	2 cut(s)	127, 1488
MlsI	TGGCCA	5 cut(s)	186, 1257, 1433, 1790, 1988
MluCI	AATT	8 cut(s)	544, 588, 649, 813, 822, 1242, 1620, 1780
MluNI	TGGCCA	5 cut(s)	186, 1257, 1433, 1790, 1988
MlyI	GAGTC	1 cut(s)	1305
Mox20I	TGGCCA	5 cut(s)	186, 1257, 1433, 1790, 1988
Mph1103I	ATGCAT	1 cut(s)	320
MroNI	GCCGGC	1 cut(s)	1912
MroXI	GAANNNNTTC	1 cut(s)	1422
MscI	TGGCCA	5 cut(s)	186, 1257, 1433, 1790, 1988
MseI	TTAA	9 cut(s)	648, 657, 711, 816, 825, 1172, 1446, 1767, 2238
MslI	CAYNNNNRTG	4 cut(s)	173, 801, 1023, 1970
Msp20I	TGGCCA	5 cut(s)	186, 1257, 1433, 1790, 1988
MspA1I	CMGCKG	1 cut(s)	2254
MspI	CCGG	7 cut(s)	27, 1626, 1866, 1913, 2106, 2153, 2177
MspR9I	CCNGG	5 cut(s)	218, 1014, 1626, 1866, 1985
MunI	CAATTG	2 cut(s)	588, 1780
Mva1269I	GAATGC	2 cut(s)	320, 945
MvaI	CCWGG	3 cut(s)	218, 1014, 1985
MvnI	CGCG	1 cut(s)	2144
MwoI	GCNNNNNNNGC	6 cut(s)	118, 131, 1548, 1829, 1838, 2041
NaeI	GCCGGC	1 cut(s)	1914
NciI	CCSGG	2 cut(s)	1626, 1866
NcoI	CCATGG	1 cut(s)	394
NgoMIV	GCCGGC	1 cut(s)	1912
NlaIV	GGNNCC	1 cut(s)	2247
NmeAIII	GCCGAG	1 cut(s)	2061
NmuCI	GTSAC	5 cut(s)	152, 1318, 1390, 1963, 1998
NsiI	ATGCAT	1 cut(s)	320
NspV	TTCGAA	1 cut(s)	1902
PagI	TCATGA	1 cut(s)	1530
PceI	AGGCCT	1 cut(s)	1234
PcsI	WCGNNNNNNNCGW	1 cut(s)	1941
PctI	GAATGC	2 cut(s)	320, 945
PdiI	GCCGGC	1 cut(s)	1914
PdmI	GAANNNNTTC	1 cut(s)	1422
PfeI	GAWTC	3 cut(s)	445, 469, 493
PflMI	CCANNNNNTGG	1 cut(s)	688
PleI	GAGTC	1 cut(s)	1304
PpsI	GAGTC	1 cut(s)	1304
PshAI	GACNNNNGTC	1 cut(s)	1084
Psp6I	CCWGG	3 cut(s)	216, 1012, 1983
PspFI	CCCAGC	1 cut(s)	593
PspGI	CCWGG	3 cut(s)	216, 1012, 1983
PspN4I	GGNNCC	1 cut(s)	2247
PstI	CTGCAG	2 cut(s)	289, 964
PsuI	RGATCY	3 cut(s)	971, 979, 1410
RsaI	GTAC	4 cut(s)	436, 1287, 1505, 2213
RsaNI	GTAC	4 cut(s)	435, 1286, 1504, 2212
RseI	CAYNNNNRTG	4 cut(s)	173, 801, 1023, 1970
SaqAI	TTAA	9 cut(s)	648, 657, 711, 816, 825, 1172, 1446, 1767, 2238
SbfI	CCTGCAGG	1 cut(s)	964
SchI	GAGTC	1 cut(s)	1305
ScrFI	CCNGG	5 cut(s)	218, 1014, 1626, 1866, 1985
SdaI	CCTGCAGG	1 cut(s)	964
SduI	GDGCHC	2 cut(s)	127, 1488
SexAI	ACCWGGT	1 cut(s)	216
SfaNI	GCATC	7 cut(s)	54, 397, 589, 879, 1862, 1941, 2076
SfcI	CTRYAG	4 cut(s)	285, 550, 960, 975
SfuI	TTCGAA	1 cut(s)	1902
SmiMI	CAYNNNNRTG	4 cut(s)	173, 801, 1023, 1970
SpeI	ACTAGT	1 cut(s)	208
Sse8387I	CCTGCAGG	1 cut(s)	964
Sse9I	AATT	8 cut(s)	544, 588, 649, 813, 822, 1242, 1620, 1780
SseBI	AGGCCT	1 cut(s)	1234
SspI	AATATT	1 cut(s)	955
SspMI	CTAG	6 cut(s)	209, 644, 693, 884, 1082, 1415
StuI	AGGCCT	1 cut(s)	1234
StyD4I	CCNGG	5 cut(s)	216, 1012, 1624, 1864, 1983
StyI	CCWWGG	4 cut(s)	394, 734, 1270, 1613
TaaI	ACNGT	9 cut(s)	38, 551, 633, 758, 1193, 1837, 1861, 2004, 2202
TaiI	ACGT	7 cut(s)	199, 1926, 2000, 2063, 2171, 2217, 2237
TaqI	TCGA	4 cut(s)	768, 1404, 1902, 1920
TasI	AATT	8 cut(s)	544, 588, 649, 813, 822, 1242, 1620, 1780
TatI	WGTACW	1 cut(s)	434
TauI	GCSGC	5 cut(s)	1779, 1823, 1872, 2147, 2251
TfiI	GAWTC	3 cut(s)	445, 469, 493
Tru1I	TTAA	9 cut(s)	648, 657, 711, 816, 825, 1172, 1446, 1767, 2238
Tru9I	TTAA	9 cut(s)	648, 657, 711, 816, 825, 1172, 1446, 1767, 2238
TscAI	CASTG	6 cut(s)	43, 180, 636, 761, 1198, 1434
TseFI	GTSAC	5 cut(s)	152, 1318, 1390, 1963, 1998
TseI	GCWGC	9 cut(s)	284, 287, 386, 1376, 1589, 1631, 2032, 2081, 2251
Tsp45I	GTSAC	5 cut(s)	152, 1318, 1390, 1963, 1998
TspDTI	ATGAA	7 cut(s)	89, 651, 675, 1194, 1200, 1214, 1239
TspGWI	ACGGA	5 cut(s)	1106, 1235, 1801, 1951, 2196
TspRI	CASTG	6 cut(s)	43, 180, 636, 761, 1198, 1434
Van91I	CCANNNNNTGG	1 cut(s)	688
XagI	CCTNNNNNAGG	1 cut(s)	1002
XapI	RAATTY	1 cut(s)	1242
XcmI	CCANNNNNNNNNTGG	3 cut(s)	28, 232, 1268
XmiI	GTMKAC	1 cut(s)	1088
XmnI	GAANNNNTTC	1 cut(s)	1422
XspI	CTAG	6 cut(s)	209, 644, 693, 884, 1082, 1415
ZraI	GACGTC	3 cut(s)	1924, 1998, 2061
Zsp2I	ATGCAT	1 cut(s)	320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.