Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004554

Physical Location & Seq

Genomic Coordinates Forward (+)

62322590 .. 62327047

Gene Structure 4458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0508600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGGGTCCTTTAGAGGCTCTGTTGTGGTTTTACTTTGCTTCAATGTTTTGGTGGGTTTTGTGTTTGGGATTGGAGTCAACTGGGGAACTCAAGATACGCATGCTCTCCCTCCGGCTTCGGTTGTGAAGATGCTCAAGGATAATGGGATTCAGAAGGTTAAGCTTTTCGACGCAGATTATAACATCTTGAATGCTCTGCGCAAGTCTGGGCTTCAGGTCATGGTGGGAATACCCAATGAGATGCTTTATGGTTTGGCTAATAGTGTGGCTGCAGCTGAGAATTGGGTCTCCAAGAATATCTCCTCACATGTCTCCAATGGAGTAGATATTAGGTATGCTGCAGTGGGCAATGAACCGCTCTTGTCAACATTCAATGGAAGCTTTCTTACAACAATATTTCCTGCTCTGCAGAATATCCAGTCGGCTCTTATAAAAGCTGGTTTGAGCAATCAGGTTAAGGTCACTATTCCCCTCAACGCTGACGTCTATGACAGTGGTACTTCAACTAAACCTTCTGATGGTGACTTCCGGGCAGATACAAAGGACCTCATGGTGAACATTGTCAAGTTCTTGAGCGACAATGGCGCTGCATTCACTGTCAATATCTATCCCTTCATAAGTCTCTACAATGATCCCAGTTTCCCTGCAGACTATGCCTTCTTTGACGGCTACTCAAGTCCCATTGATGACAATGGGAAAATCTATCAGAATGTGTTTGATGCAAACCATGATACACTAGTGTGGTCATTACAAAAGAATGGATTCAATAACTTGTCCATAATCGTTGGAGAGATTGGTTGGCCTACTGATGGGGACCAGAATGCAAATTTGCAGTATGCACAGCGGTTCAACCAGGGCTTCATGACCCGGATCAAGAACAATGTAGGCACTCCAATGAGACCTGGCCCCGTGGATGCTTACTTATTCAGCCTTGTTGATGAAGATGCCAAGAGCATTCAGCCAGGTAACTTCGAACGCCATTGGGGGTTGTTTTACTTTGATGGAACACCCAAGTATCAGCTCAGTTTGGGCACTGCAAATGCTTTAGTAGGAGTAAGTGGTGTAAAATATCTGGCTAAGAAATGGTGCGTTCTGTCACCATCAGCTAATCTTGATGATCCCCAAGTTCCTCTAAGCGTGGGCTACGCTTGTGAACGTGCTGATTGCACAAGTCTTGGATATGGGACCTCGTGTGGAAACTTAGACATCAAAGGAAACATTTCGTATGCGTTTAACAGTTACTATCAGGTCCATGATCAGCTGGACACTGCCTGCAAGTTTCCAAATCTATCAACTGTCACCACCTCCGATCCATCAACTGGAGACTGCAAATTTAGGATCATGATTGAAGGTGACTATAGTTCAAGTAGTGTGAACGGCAGAGCTGGGGCTCTGGGAAAGCCTCTCTGTTCGATTTTGTTTGTGTTGCTGTTTACATTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004812 GO:0004817 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006423 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0017076 GO:0019538 GO:0019752 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0034660 GO:0035639 GO:0036094 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:0097159 GO:0097367 GO:0140098 GO:0140101 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

DALR_2 tRNA-synt_1e

Protein Analysis

481

Amino Acids

52.27

Weight (kDa)

5.17

Isoelectric Point (pI)

26.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	24 - 342	2e-64	Glycosyl hydrolases family 17
X8	PF07983	361 - 430	4.9e-14	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004554)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0364611 RchiOBHm_Chr1g0364621 RchiOBHm_Chr7g0191131 RchiOBHm_Chr7g0191141
rosa_multiflora	Rmu_sc0001080.1_g000001 Rmu_sc0030373.1_g000002 Rmu_sc0031056.1_g000001 Rmu_sc0035217.1_g000001 Rmu_ssc0000282.1_g000023
rosa_roxburghii	Rroxscaffold_3G00264010 Rroxscaffold_3G00264020
rosa_rugosa	Rorug06G0508600 Rorug06G0508600 Rorug06G0508600 Rorug06G0508700 Rorug06G0508800 Rorug06G0508900.1
rosa_samantha	Rh1AG146100 Rh1AG146200 Rh1AG325500 Rh1AG325600 Rh1CG137500 Rh1CG137700 Rh1DG152600 Rh1DG152900 Rh7AG116200 Rh7CG121100 Rh7CG121200 Rh7DG119500
rosa_wichuraiana	Rw7G010080 Rw7G010090 Rw7G010170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	180, 431
AatII	GACGTC	1 cut(s)	486
Acc16I	TGCGCA	1 cut(s)	200
AccB7I	CCANNNNNTGG	1 cut(s)	1319
AccBSI	CCGCTC	1 cut(s)	358
AciI	CCGC	2 cut(s)	356, 844
AclWI	GGATC	5 cut(s)	626, 878, 1112, 1304, 1346
AcsI	RAATTY	2 cut(s)	826, 1331
AcuI	CTGAAG	1 cut(s)	197
AcyI	GRCGYC	1 cut(s)	483
AfaI	GTAC	1 cut(s)	499
AfiI	CCNNNNNNNGG	3 cut(s)	518, 809, 1319
AflIII	ACRYGT	1 cut(s)	307
AgsI	TTSAA	8 cut(s)	43, 190, 373, 504, 766, 850, 1349, 1365
AhlI	ACTAGT	1 cut(s)	736
AjnI	CCWGG	3 cut(s)	852, 901, 961
AleI	CACNNNNGTG	1 cut(s)	739
AluBI	AGCT	8 cut(s)	163, 275, 381, 437, 1021, 1106, 1261, 1385
AluI	AGCT	8 cut(s)	163, 275, 381, 437, 1021, 1106, 1261, 1385
Alw26I	GTCTC	5 cut(s)	292, 316, 626, 892, 1317
AlwI	GGATC	5 cut(s)	626, 878, 1112, 1304, 1346
AoxI	GGCC	2 cut(s)	800, 904
ApeKI	GCWGC	4 cut(s)	269, 272, 338, 587
ApoI	RAATTY	2 cut(s)	826, 1331
Asp700I	GAANNNNTTC	2 cut(s)	761, 1219
AspLEI	GCGC	2 cut(s)	201, 587
AspS9I	GGNCC	6 cut(s)	6, 544, 814, 905, 1185, 1249
AsuC2I	CCSGG	2 cut(s)	530, 868
AsuHPI	GGTGA	5 cut(s)	533, 565, 1089, 1291, 1364
AsuII	TTCGAA	1 cut(s)	972
AvaII	GGWCC	5 cut(s)	6, 544, 814, 1185, 1249
BaeGI	GKGCMC	1 cut(s)	1034
BaeI	ACNNNNGTAYC	4 cut(s)	723, 756, 998, 1031
BanII	GRGCYC	1 cut(s)	1393
BarI	GAAGNNNNNNTAC	2 cut(s)	370, 402
BauI	CACGAG	1 cut(s)	1189
BbvI	GCAGC	4 cut(s)	256, 284, 325, 574
BccI	CCATC	5 cut(s)	512, 803, 995, 1108, 1321
BceAI	ACGGC	2 cut(s)	682, 1393
BciT130I	CCWGG	3 cut(s)	854, 903, 963
BclI	TGATCA	1 cut(s)	1255
BcnI	CCSGG	2 cut(s)	530, 868
BcoDI	GTCTC	5 cut(s)	292, 316, 626, 892, 1317
BcuI	ACTAGT	1 cut(s)	736
BfaI	CTAG	1 cut(s)	737
BfmI	CTRYAG	5 cut(s)	270, 339, 407, 645, 1357
BfoI	RGCGCY	1 cut(s)	588
BisI	GCNGC	4 cut(s)	270, 273, 339, 588
BlsI	GCNGC	4 cut(s)	271, 274, 340, 589
Bme1390I	CCNGG	5 cut(s)	530, 854, 868, 903, 963
Bme18I	GGWCC	5 cut(s)	6, 544, 814, 1185, 1249
BmgT120I	GGNCC	6 cut(s)	6, 544, 814, 905, 1185, 1249
BmiI	GGNNCC	4 cut(s)	7, 815, 907, 1186
BmrFI	CCNGG	5 cut(s)	530, 854, 868, 903, 963
BmrI	ACTGGG	2 cut(s)	91, 630
BmsI	GCATC	5 cut(s)	120, 231, 709, 904, 934
BmuI	ACTGGG	2 cut(s)	91, 630
BpmI	CTGGAG	1 cut(s)	1341
Bpu14I	TTCGAA	1 cut(s)	972
BpuEI	CTTGAG	4 cut(s)	75, 119, 592, 658
BpuMI	CCSGG	2 cut(s)	530, 868
BsaHI	GRCGYC	1 cut(s)	483
BsaI	GGTCTC	2 cut(s)	292, 892
BsaJI	CCNNGG	2 cut(s)	853, 909
Bsc4I	CCNNNNNNNGG	3 cut(s)	518, 809, 1319
Bse1I	ACTGG	4 cut(s)	86, 418, 636, 1324
Bse3DI	GCAATG	1 cut(s)	355
BseBI	CCWGG	3 cut(s)	854, 903, 963
BseDI	CCNNGG	2 cut(s)	853, 909
BseGI	GGATG	1 cut(s)	919
BseLI	CCNNNNNNNGG	3 cut(s)	518, 809, 1319
BseMI	GCAATG	1 cut(s)	355
BseMII	CTCAG	2 cut(s)	267, 1036
BseNI	ACTGG	4 cut(s)	86, 418, 636, 1324
BseRI	GAGGAG	1 cut(s)	292
BseSI	GKGCMC	1 cut(s)	1034
BseXI	GCAGC	4 cut(s)	256, 284, 325, 574
BseYI	CCCAGC	1 cut(s)	1385
BshFI	GGCC	2 cut(s)	802, 906
BsiSI	CCGG	3 cut(s)	113, 529, 868
BslFI	GGGAC	3 cut(s)	663, 827, 1198
BslI	CCNNNNNNNGG	3 cut(s)	518, 809, 1319
BsmAI	GTCTC	5 cut(s)	292, 316, 626, 892, 1317
BsmFI	GGGAC	3 cut(s)	663, 827, 1198
BsmI	GAATGC	4 cut(s)	196, 590, 826, 954
BsnI	GGCC	2 cut(s)	802, 906
Bso31I	GGTCTC	2 cut(s)	292, 892
Bsp119I	TTCGAA	1 cut(s)	972
Bsp1286I	GDGCHC	2 cut(s)	1034, 1393
Bsp143I	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
BspACI	CCGC	2 cut(s)	356, 844
BspANI	GGCC	2 cut(s)	802, 906
BspCNI	CTCAG	2 cut(s)	268, 1035
BspHI	TCATGA	2 cut(s)	861, 1341
BspLI	GGNNCC	4 cut(s)	7, 815, 907, 1186
BspMAI	CTGCAG	4 cut(s)	274, 343, 411, 649
BspPI	GGATC	5 cut(s)	626, 878, 1112, 1304, 1346
BspT104I	TTCGAA	1 cut(s)	972
BspTNI	GGTCTC	2 cut(s)	292, 892
BsrBI	CCGCTC	1 cut(s)	358
BsrDI	GCAATG	1 cut(s)	355
BsrI	ACTGG	4 cut(s)	86, 418, 636, 1324
BssECI	CCNNGG	2 cut(s)	853, 909
BssMI	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
BssNI	GRCGYC	1 cut(s)	483
BssSI	CACGAG	1 cut(s)	1189
Bst2BI	CACGAG	1 cut(s)	1189
Bst2UI	CCWGG	3 cut(s)	854, 903, 963
Bst4CI	ACNGT	4 cut(s)	494, 598, 1238, 1297
BstACI	GRCGYC	1 cut(s)	483
BstAPI	GCANNNNNTGC	1 cut(s)	653
BstBI	TTCGAA	1 cut(s)	972
BstC8I	GCNNGC	2 cut(s)	102, 1273
BstDEI	CTNAG	5 cut(s)	276, 1022, 1077, 1133, 1201
BstDSI	CCRYGG	1 cut(s)	909
BstF5I	GGATG	1 cut(s)	919
BstH2I	RGCGCY	1 cut(s)	588
BstHHI	GCGC	2 cut(s)	201, 587
BstKTI	GATC	6 cut(s)	634, 873, 1120, 1258, 1312, 1341
BstMAI	GTCTC	5 cut(s)	292, 316, 626, 892, 1317
BstMBI	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
BstMWI	GCNNNNNNNGC	2 cut(s)	582, 653
BstNI	CCWGG	3 cut(s)	854, 903, 963
BstNSI	RCATGY	2 cut(s)	104, 311
BstSCI	CCNGG	5 cut(s)	528, 852, 866, 901, 961
BstSFI	CTRYAG	5 cut(s)	270, 339, 407, 645, 1357
BstSLI	GKGCMC	1 cut(s)	1034
BstV1I	GCAGC	4 cut(s)	256, 284, 325, 574
BsuRI	GGCC	2 cut(s)	802, 906
BtgI	CCRYGG	1 cut(s)	909
BtsCI	GGATG	1 cut(s)	919
BtsI	GCAGTG	3 cut(s)	348, 1032, 1266
BtsIMutI	CAGTG	5 cut(s)	348, 499, 594, 1032, 1266
Cac8I	GCNNGC	2 cut(s)	102, 1273
CciI	TCATGA	2 cut(s)	861, 1341
CfoI	GCGC	2 cut(s)	201, 587
Cfr13I	GGNCC	6 cut(s)	6, 544, 814, 905, 1185, 1249
CseI	GACGC	1 cut(s)	179
Csp6I	GTAC	1 cut(s)	498
CviAII	CATG	8 cut(s)	101, 220, 308, 550, 728, 862, 1253, 1342
CviQI	GTAC	1 cut(s)	498
DdeI	CTNAG	5 cut(s)	276, 1022, 1077, 1133, 1201
DpnI	GATC	6 cut(s)	633, 872, 1119, 1257, 1311, 1340
DpnII	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
Eco24I	GRGCYC	1 cut(s)	1393
Eco31I	GGTCTC	2 cut(s)	292, 892
Eco47I	GGWCC	5 cut(s)	6, 544, 814, 1185, 1249
Eco57I	CTGAAG	1 cut(s)	197
EcoO109I	RGGNCCY	3 cut(s)	6, 544, 1185
EcoRII	CCWGG	3 cut(s)	852, 901, 961
EcoT38I	GRGCYC	1 cut(s)	1393
FaeI	CATG	8 cut(s)	104, 223, 311, 553, 731, 865, 1256, 1345
FaqI	GGGAC	3 cut(s)	663, 827, 1198
FatI	CATG	8 cut(s)	100, 219, 307, 549, 727, 861, 1252, 1341
FbaI	TGATCA	1 cut(s)	1255
Fnu4HI	GCNGC	4 cut(s)	270, 273, 339, 588
FokI	GGATG	1 cut(s)	926
FriOI	GRGCYC	1 cut(s)	1393
Fsp4HI	GCNGC	4 cut(s)	270, 273, 339, 588
FspBI	CTAG	1 cut(s)	737
FspI	TGCGCA	1 cut(s)	200
GlaI	GCGC	2 cut(s)	200, 586
GluI	GCNGC	4 cut(s)	270, 273, 339, 588
GsaI	CCCAGC	1 cut(s)	1389
GsuI	CTGGAG	1 cut(s)	1341
HaeII	RGCGCY	1 cut(s)	588
HaeIII	GGCC	2 cut(s)	802, 906
HapII	CCGG	3 cut(s)	113, 529, 868
HgaI	GACGC	1 cut(s)	179
HhaI	GCGC	2 cut(s)	201, 587
Hin1I	GRCGYC	1 cut(s)	483
Hin1II	CATG	8 cut(s)	104, 223, 311, 553, 731, 865, 1256, 1345
Hin6I	GCGC	2 cut(s)	199, 585
HinP1I	GCGC	2 cut(s)	199, 585
HincII	GTYRAC	2 cut(s)	79, 366
HindII	GTYRAC	2 cut(s)	79, 366
HindIII	AAGCTT	2 cut(s)	161, 379
HinfI	GANTC	3 cut(s)	75, 148, 762
HpaII	CCGG	3 cut(s)	113, 529, 868
HphI	GGTGA	5 cut(s)	533, 565, 1089, 1291, 1364
Hpy166II	GTNNAC	6 cut(s)	79, 366, 556, 1154, 1375, 1434
Hpy188I	TCNGA	4 cut(s)	153, 517, 708, 1309
Hpy188III	TCNNGA	7 cut(s)	92, 187, 571, 862, 874, 1112, 1342
Hpy8I	GTNNAC	6 cut(s)	79, 366, 556, 1154, 1375, 1434
Hpy99I	CGWCG	1 cut(s)	173
HpyAV	CCTTC	5 cut(s)	148, 522, 622, 667, 1343
HpyCH4III	ACNGT	4 cut(s)	494, 598, 1238, 1297
HpyCH4IV	ACGT	2 cut(s)	483, 1156
HpyF10VI	GCNNNNNNNGC	2 cut(s)	582, 653
HpyF3I	CTNAG	5 cut(s)	276, 1022, 1077, 1133, 1201
HpySE526I	ACGT	2 cut(s)	483, 1156
Hsp92I	GRCGYC	1 cut(s)	483
Hsp92II	CATG	8 cut(s)	104, 223, 311, 553, 731, 865, 1256, 1345
HspAI	GCGC	2 cut(s)	199, 585
Ksp22I	TGATCA	1 cut(s)	1255
Kzo9I	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
Lsp1109I	GCAGC	4 cut(s)	256, 284, 325, 574
LweI	GCATC	5 cut(s)	120, 231, 709, 904, 934
MaeI	CTAG	1 cut(s)	737
MaeII	ACGT	2 cut(s)	483, 1156
MaeIII	GTNAC	7 cut(s)	460, 521, 965, 1095, 1238, 1297, 1352
MalI	GATC	6 cut(s)	633, 872, 1119, 1257, 1311, 1340
MbiI	CCGCTC	1 cut(s)	358
MboI	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
MboII	GAAGA	2 cut(s)	139, 953
MhlI	GDGCHC	2 cut(s)	1034, 1393
MluCI	AATT	3 cut(s)	280, 826, 1331
MlyI	GAGTC	1 cut(s)	84
MmeI	TCCRAC	1 cut(s)	766
MnlI	CCTC	9 cut(s)	8, 120, 313, 482, 557, 1140, 1198, 1315, 1413
MroXI	GAANNNNTTC	2 cut(s)	761, 1219
MseI	TTAA	3 cut(s)	159, 456, 1233
MslI	CAYNNNNRTG	2 cut(s)	739, 893
MspA1I	CMGCKG	3 cut(s)	275, 844, 1261
MspI	CCGG	3 cut(s)	113, 529, 868
MspR9I	CCNGG	5 cut(s)	530, 854, 868, 903, 963
Mva1269I	GAATGC	4 cut(s)	196, 590, 826, 954
MvaI	CCWGG	3 cut(s)	854, 903, 963
MwoI	GCNNNNNNNGC	2 cut(s)	582, 653
NciI	CCSGG	2 cut(s)	530, 868
NdeII	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
NlaIII	CATG	8 cut(s)	104, 223, 311, 553, 731, 865, 1256, 1345
NlaIV	GGNNCC	4 cut(s)	7, 815, 907, 1186
NmuCI	GTSAC	5 cut(s)	460, 521, 1095, 1297, 1352
NsbI	TGCGCA	1 cut(s)	200
NspI	RCATGY	2 cut(s)	104, 311
NspV	TTCGAA	1 cut(s)	972
OliI	CACNNNNGTG	1 cut(s)	739
PaeI	GCATGC	1 cut(s)	104
PagI	TCATGA	2 cut(s)	861, 1341
PciI	ACATGT	1 cut(s)	307
PctI	GAATGC	4 cut(s)	196, 590, 826, 954
PdmI	GAANNNNTTC	2 cut(s)	761, 1219
PfeI	GAWTC	2 cut(s)	148, 762
PflMI	CCANNNNNTGG	1 cut(s)	1319
PkrI	GCNGC	4 cut(s)	271, 274, 340, 589
PleI	GAGTC	1 cut(s)	83
PpsI	GAGTC	1 cut(s)	83
PpuMI	RGGWCCY	3 cut(s)	6, 544, 1185
PscI	ACATGT	1 cut(s)	307
PsiI	TTATAA	2 cut(s)	180, 431
Psp5II	RGGWCCY	3 cut(s)	6, 544, 1185
Psp6I	CCWGG	3 cut(s)	852, 901, 961
PspFI	CCCAGC	1 cut(s)	1385
PspGI	CCWGG	3 cut(s)	852, 901, 961
PspN4I	GGNNCC	4 cut(s)	7, 815, 907, 1186
PspPI	GGNCC	6 cut(s)	6, 544, 814, 905, 1185, 1249
PspPPI	RGGWCCY	3 cut(s)	6, 544, 1185
PsrI	GAACNNNNNNTAC	2 cut(s)	79, 111
PstI	CTGCAG	4 cut(s)	274, 343, 411, 649
PvuII	CAGCTG	2 cut(s)	275, 1261
RsaI	GTAC	1 cut(s)	499
RsaNI	GTAC	1 cut(s)	498
RseI	CAYNNNNRTG	2 cut(s)	739, 893
SaqAI	TTAA	3 cut(s)	159, 456, 1233
SatI	GCNGC	4 cut(s)	270, 273, 339, 588
Sau3AI	GATC	6 cut(s)	631, 870, 1117, 1255, 1309, 1338
Sau96I	GGNCC	6 cut(s)	6, 544, 814, 905, 1185, 1249
SchI	GAGTC	1 cut(s)	84
ScrFI	CCNGG	5 cut(s)	530, 854, 868, 903, 963
SduI	GDGCHC	2 cut(s)	1034, 1393
SfaNI	GCATC	5 cut(s)	120, 231, 709, 904, 934
SfcI	CTRYAG	5 cut(s)	270, 339, 407, 645, 1357
SfuI	TTCGAA	1 cut(s)	972
SinI	GGWCC	5 cut(s)	6, 544, 814, 1185, 1249
SmiMI	CAYNNNNRTG	2 cut(s)	739, 893
SmlI	CTYRAG	4 cut(s)	90, 134, 571, 673
SmoI	CTYRAG	4 cut(s)	90, 134, 571, 673
SpeI	ACTAGT	1 cut(s)	736
SphI	GCATGC	1 cut(s)	104
Sse9I	AATT	3 cut(s)	280, 826, 1331
SsiI	CCGC	2 cut(s)	356, 844
SspI	AATATT	1 cut(s)	396
SspMI	CTAG	1 cut(s)	737
StyD4I	CCNGG	5 cut(s)	528, 852, 866, 901, 961
TaaI	ACNGT	4 cut(s)	494, 598, 1238, 1297
TaiI	ACGT	2 cut(s)	486, 1159
TaqI	TCGA	3 cut(s)	168, 972, 1412
TasI	AATT	3 cut(s)	280, 826, 1331
TfiI	GAWTC	2 cut(s)	148, 762
Tru1I	TTAA	3 cut(s)	159, 456, 1233
Tru9I	TTAA	3 cut(s)	159, 456, 1233
TscAI	CASTG	5 cut(s)	348, 499, 601, 1039, 1273
TseFI	GTSAC	5 cut(s)	460, 521, 1095, 1297, 1352
TseI	GCWGC	4 cut(s)	269, 272, 338, 587
Tsp45I	GTSAC	5 cut(s)	460, 521, 1095, 1297, 1352
TspDTI	ATGAA	4 cut(s)	366, 604, 850, 954
TspRI	CASTG	5 cut(s)	348, 499, 601, 1039, 1273
Van91I	CCANNNNNTGG	1 cut(s)	1319
VpaK11BI	GGWCC	5 cut(s)	6, 544, 814, 1185, 1249
XapI	RAATTY	2 cut(s)	826, 1331
XceI	RCATGY	2 cut(s)	104, 311
XmnI	GAANNNNTTC	2 cut(s)	761, 1219
XspI	CTAG	1 cut(s)	737
ZraI	GACGTC	1 cut(s)	484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.