Blue copper protein-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08500 |
| fragaria_vesca | FvH4_5g22740 |
| malus_domestica | MD03G1156900.v1.1 MD11G1183800.v1.1 |
| prunus_persica | Prupe.4G270100_v2.0.a1 |
| pyrus_communis | pycom12561g00210 pycom5153684g00100 |
| rosa_chinensis | RchiOBHm_Chr5g0044801 RchiOBHm_Chr7g0211321 |
| rosa_laevigata | RLG00000003010 RLG00000034298 |
| rosa_multiflora | Rmu_sc0004567.1_g000014 Rmu_sc0010445.1_g000001 Rmu_sc0020779.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00030860 Rroxscaffold_1G00036240 Rroxscaffold_3G00247930 |
| rosa_rugosa | Rorug05G0218200 Rorug07G0125000 |
| rosa_samantha | Rh5BG307800 Rh5CG334900 Rh5DG317900 Rh7AG257400 Rh7BG251500 Rh7CG274200 Rh7DG264400 |
| rosa_wichuraiana | Rw5G027880 Rw5G027890 Rw7G022000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 59 |
| AccB1I | GGYRCC | 2 cut(s) | 59, 77 |
| AcsI | RAATTY | 1 cut(s) | 86 |
| AfaI | GTAC | 1 cut(s) | 61 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 69 |
| AoxI | GGCC | 1 cut(s) | 219 |
| ApoI | RAATTY | 1 cut(s) | 86 |
| Asp718I | GGTACC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 1 cut(s) | 4 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 43, 76 |
| BanI | GGYRCC | 2 cut(s) | 59, 77 |
| BfaI | CTAG | 1 cut(s) | 108 |
| BglII | AGATCT | 1 cut(s) | 110 |
| BmiI | GGNNCC | 2 cut(s) | 61, 79 |
| BpmI | CTGGAG | 1 cut(s) | 18 |
| BsaJI | CCNNGG | 2 cut(s) | 55, 99 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 69 |
| Bse3DI | GCAATG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 2 cut(s) | 55, 99 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BseMI | GCAATG | 1 cut(s) | 63 |
| BshFI | GGCC | 1 cut(s) | 221 |
| BshNI | GGYRCC | 2 cut(s) | 59, 77 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BsnI | GGCC | 1 cut(s) | 221 |
| Bsp143I | GATC | 2 cut(s) | 9, 110 |
| BspANI | GGCC | 1 cut(s) | 221 |
| BspLI | GGNNCC | 2 cut(s) | 61, 79 |
| BspT107I | GGYRCC | 2 cut(s) | 59, 77 |
| BsrDI | GCAATG | 1 cut(s) | 63 |
| BssECI | CCNNGG | 2 cut(s) | 55, 99 |
| BssMI | GATC | 2 cut(s) | 9, 110 |
| BssT1I | CCWWGG | 2 cut(s) | 55, 99 |
| Bst4CI | ACNGT | 1 cut(s) | 16 |
| Bst6I | CTCTTC | 2 cut(s) | 174, 189 |
| BstKTI | GATC | 2 cut(s) | 12, 113 |
| BstMBI | GATC | 2 cut(s) | 9, 110 |
| BstNSI | RCATGY | 1 cut(s) | 214 |
| BstX2I | RGATCY | 1 cut(s) | 110 |
| BstYI | RGATCY | 1 cut(s) | 110 |
| BsuRI | GGCC | 1 cut(s) | 221 |
| Csp6I | GTAC | 1 cut(s) | 60 |
| CviAII | CATG | 3 cut(s) | 91, 164, 211 |
| CviJI | RGCY | 3 cut(s) | 98, 104, 221 |
| CviKI_1 | RGCY | 3 cut(s) | 98, 104, 221 |
| CviQI | GTAC | 1 cut(s) | 60 |
| DpnI | GATC | 2 cut(s) | 11, 112 |
| DpnII | GATC | 2 cut(s) | 9, 110 |
| Eam1104I | CTCTTC | 2 cut(s) | 174, 189 |
| EarI | CTCTTC | 2 cut(s) | 174, 189 |
| Eco130I | CCWWGG | 2 cut(s) | 55, 99 |
| EcoT14I | CCWWGG | 2 cut(s) | 55, 99 |
| ErhI | CCWWGG | 2 cut(s) | 55, 99 |
| FaeI | CATG | 3 cut(s) | 94, 167, 214 |
| FaiI | YATR | 5 cut(s) | 92, 160, 165, 212, 242 |
| FatI | CATG | 3 cut(s) | 90, 163, 210 |
| FspBI | CTAG | 1 cut(s) | 108 |
| GsuI | CTGGAG | 1 cut(s) | 18 |
| HaeIII | GGCC | 1 cut(s) | 221 |
| Hin1II | CATG | 3 cut(s) | 94, 167, 214 |
| HincII | GTYRAC | 1 cut(s) | 49 |
| HindII | GTYRAC | 1 cut(s) | 49 |
| HinfI | GANTC | 1 cut(s) | 147 |
| HphI | GGTGA | 1 cut(s) | 4 |
| Hpy166II | GTNNAC | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy188III | TCNNGA | 1 cut(s) | 35 |
| Hpy8I | GTNNAC | 1 cut(s) | 49 |
| HpyAV | CCTTC | 3 cut(s) | 39, 169, 193 |
| HpyCH4III | ACNGT | 1 cut(s) | 16 |
| HpyCH4V | TGCA | 2 cut(s) | 68, 158 |
| Hsp92II | CATG | 3 cut(s) | 94, 167, 214 |
| KpnI | GGTACC | 1 cut(s) | 63 |
| Kzo9I | GATC | 2 cut(s) | 9, 110 |
| LpnPI | CCDG | 4 cut(s) | 48, 60, 203, 236 |
| MaeI | CTAG | 1 cut(s) | 108 |
| MalI | GATC | 2 cut(s) | 11, 112 |
| MboI | GATC | 2 cut(s) | 9, 110 |
| MboII | GAAGA | 3 cut(s) | 50, 191, 206 |
| MflI | RGATCY | 1 cut(s) | 110 |
| MluCI | AATT | 1 cut(s) | 86 |
| MmeI | TCCRAC | 1 cut(s) | 124 |
| MnlI | CCTC | 1 cut(s) | 175 |
| NdeII | GATC | 2 cut(s) | 9, 110 |
| NlaIII | CATG | 3 cut(s) | 94, 167, 214 |
| NlaIV | GGNNCC | 2 cut(s) | 61, 79 |
| NspI | RCATGY | 1 cut(s) | 214 |
| PfeI | GAWTC | 1 cut(s) | 147 |
| PspN4I | GGNNCC | 2 cut(s) | 61, 79 |
| PsuI | RGATCY | 1 cut(s) | 110 |
| RsaI | GTAC | 1 cut(s) | 61 |
| RsaNI | GTAC | 1 cut(s) | 60 |
| Sau3AI | GATC | 2 cut(s) | 9, 110 |
| SetI | ASST | 2 cut(s) | 57, 74 |
| Sse9I | AATT | 1 cut(s) | 86 |
| SspMI | CTAG | 1 cut(s) | 108 |
| StyI | CCWWGG | 2 cut(s) | 55, 99 |
| TaaI | ACNGT | 1 cut(s) | 16 |
| TasI | AATT | 1 cut(s) | 86 |
| TfiI | GAWTC | 1 cut(s) | 147 |
| TspDTI | ATGAA | 3 cut(s) | 17, 79, 207 |
| XapI | RAATTY | 1 cut(s) | 86 |
| XceI | RCATGY | 1 cut(s) | 214 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 88 |
| XspI | CTAG | 1 cut(s) | 108 |