Rh7CG274200

Blue copper protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0005440
Physical Location & Seq
Reverse (-)
27475311 .. 27476842
1532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG274200.1

Sequence Viewer

Length: 609 bp
ATGGACGTCTCCATAAAACGGCATGGCCATTTGTGCTTCACATGTAGCCACTCAAAACAAAGACTCCCACCGACGCCTTCTCCGTTTATCCTCTTTAAGCAGCTCATAGTTTTCAATACTGATACGAACCACTCGGTCGTCCAAACCTATAACATGACAACGTACAAGCTGTGCGATTATGACGACGCCGAGGAGAAGGATATAATTCAATGGTCAGAAGCGAACCCGTCAAACACCGCCACACACGATGTGTCGGTGGCAGTTGCTTTGTTAAAAGAGGGCATCACATATTTCTTTTCCGGTGATTATGATGGCGAACAGTGCCAGAATGGGCAGCACTTCAAGTTAAATGTTACTCACGGACAAGGCTTGCCAAAGAGTTTAGACGATTCCCCGGCAGGACCAGCAAGCAGTCCACAGTCAAGCAATGGAGACGATGAATCAATCCCGGACACAATCGTCCCTAATTCCAACTTCAATGACCCCAAACAAGAAGATGCCAATGATGATAAACAGCCATCTGGATCCGTTTCATTTTCAGTTCGGCCTCATGTACAAGGCAATCTGATTTTCGTTTTGCTAGGTCTTGTCTACTTGTTGTACTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu_bind_like

Protein Analysis

202

Amino Acids

22.3

Weight (kDa)

4.84

Isoelectric Point (pI)

36.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 458
AatII GACGTC 1 cut(s) 9
AccI GTMKAC 1 cut(s) 591
AciI CCGC 1 cut(s) 237
AclWI GGATC 2 cut(s) 519, 532
AcoI YGGCCR 1 cut(s) 25
AcyI GRCGYC 3 cut(s) 6, 74, 186
AdeI CACNNNGTG 1 cut(s) 250
AfaI GTAC 3 cut(s) 164, 555, 602
AfiI CCNNNNNNNGG 1 cut(s) 18
AflIII ACRYGT 1 cut(s) 41
AgsI TTSAA 4 cut(s) 115, 209, 343, 478
AluBI AGCT 2 cut(s) 103, 169
AluI AGCT 2 cut(s) 103, 169
Alw26I GTCTC 2 cut(s) 13, 426
AlwI GGATC 2 cut(s) 519, 532
AoxI GGCC 2 cut(s) 25, 545
ApeKI GCWGC 2 cut(s) 100, 334
AspS9I GGNCC 1 cut(s) 401
AsuC2I CCSGG 2 cut(s) 395, 449
AsuHPI GGTGA 1 cut(s) 314
AvaII GGWCC 1 cut(s) 401
BalI TGGCCA 1 cut(s) 27
BamHI GGATCC 1 cut(s) 524
BbvI GCAGC 2 cut(s) 112, 346
BccI CCATC 2 cut(s) 305, 526
BceAI ACGGC 1 cut(s) 35
BcnI CCSGG 2 cut(s) 395, 449
BcoDI GTCTC 2 cut(s) 13, 426
BfaI CTAG 1 cut(s) 581
BisI GCNGC 2 cut(s) 101, 335
BlsI GCNGC 2 cut(s) 102, 336
Bme1390I CCNGG 2 cut(s) 395, 449
Bme18I GGWCC 1 cut(s) 401
BmgT120I GGNCC 1 cut(s) 401
BmiI GGNNCC 1 cut(s) 526
BmrFI CCNGG 2 cut(s) 395, 449
BmsI GCATC 2 cut(s) 291, 487
BpuMI CCSGG 2 cut(s) 395, 449
BsaHI GRCGYC 3 cut(s) 6, 74, 186
BsaJI CCNNGG 2 cut(s) 189, 393
BsaWI WCCGGW 1 cut(s) 299
BsaXI ACNNNNNCTCC 4 cut(s) 48, 64, 78, 94
Bsc4I CCNNNNNNNGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 433
BseDI CCNNGG 2 cut(s) 189, 393
BseLI CCNNNNNNNGG 1 cut(s) 18
BseMI GCAATG 1 cut(s) 433
BseRI GAGGAG 1 cut(s) 206
BseXI GCAGC 2 cut(s) 112, 346
Bsh1285I CGRYCG 1 cut(s) 138
BshFI GGCC 2 cut(s) 27, 547
BsiEI CGRYCG 1 cut(s) 138
BsiSI CCGG 3 cut(s) 300, 395, 449
BslFI GGGAC 1 cut(s) 446
BslI CCNNNNNNNGG 1 cut(s) 18
BsmAI GTCTC 2 cut(s) 13, 426
BsmBI CGTCTC 2 cut(s) 13, 426
BsmFI GGGAC 1 cut(s) 446
BsnI GGCC 2 cut(s) 27, 547
Bsp1407I TGTACA 1 cut(s) 553
Bsp143I GATC 1 cut(s) 524
BspACI CCGC 1 cut(s) 237
BspANI GGCC 2 cut(s) 27, 547
BspHI TCATGA 1 cut(s) 605
BspLI GGNNCC 1 cut(s) 526
BspPI GGATC 2 cut(s) 519, 532
BsrDI GCAATG 1 cut(s) 433
BsrGI TGTACA 1 cut(s) 553
BssECI CCNNGG 2 cut(s) 189, 393
BssMI GATC 1 cut(s) 524
BssNI GRCGYC 3 cut(s) 6, 74, 186
Bst4CI ACNGT 2 cut(s) 321, 420
BstACI GRCGYC 3 cut(s) 6, 74, 186
BstAUI TGTACA 1 cut(s) 553
BstC8I GCNNGC 2 cut(s) 371, 409
BstKTI GATC 1 cut(s) 527
BstMAI GTCTC 2 cut(s) 13, 426
BstMBI GATC 1 cut(s) 524
BstMCI CGRYCG 1 cut(s) 138
BstMWI GCNNNNNNNGC 3 cut(s) 33, 321, 404
BstNSI RCATGY 1 cut(s) 45
BstSCI CCNGG 2 cut(s) 393, 447
BstV1I GCAGC 2 cut(s) 112, 346
BstX2I RGATCY 1 cut(s) 524
BstYI RGATCY 1 cut(s) 524
BsuRI GGCC 2 cut(s) 27, 547
BtsIMutI CAGTG 1 cut(s) 326
Cac8I GCNNGC 2 cut(s) 371, 409
CciI TCATGA 1 cut(s) 605
Cfr13I GGNCC 1 cut(s) 401
CseI GACGC 2 cut(s) 82, 194
Csp6I GTAC 3 cut(s) 163, 554, 601
CviAII CATG 5 cut(s) 23, 42, 154, 551, 606
CviJI RGCY 7 cut(s) 27, 48, 103, 169, 369, 517, 547
CviKI_1 RGCY 7 cut(s) 27, 48, 103, 169, 369, 517, 547
CviQI GTAC 3 cut(s) 163, 554, 601
DpnI GATC 1 cut(s) 526
DpnII GATC 1 cut(s) 524
DraIII CACNNNGTG 1 cut(s) 250
DrdI GACNNNNNNGTC 1 cut(s) 458
DseDI GACNNNNNNGTC 1 cut(s) 458
EaeI YGGCCR 1 cut(s) 25
Eco47I GGWCC 1 cut(s) 401
Esp3I CGTCTC 2 cut(s) 13, 426
FaeI CATG 5 cut(s) 26, 45, 157, 554, 609
FaqI GGGAC 1 cut(s) 446
FatI CATG 5 cut(s) 22, 41, 153, 550, 605
FblI GTMKAC 1 cut(s) 591
Fnu4HI GCNGC 2 cut(s) 101, 335
Fsp4HI GCNGC 2 cut(s) 101, 335
FspBI CTAG 1 cut(s) 581
GluI GCNGC 2 cut(s) 101, 335
HaeIII GGCC 2 cut(s) 27, 547
HapII CCGG 3 cut(s) 300, 395, 449
HgaI GACGC 2 cut(s) 82, 194
Hin1I GRCGYC 3 cut(s) 6, 74, 186
Hin1II CATG 5 cut(s) 26, 45, 157, 554, 609
HinfI GANTC 3 cut(s) 63, 389, 440
HpaII CCGG 3 cut(s) 300, 395, 449
HphI GGTGA 1 cut(s) 314
Hpy166II GTNNAC 2 cut(s) 416, 592
Hpy188I TCNGA 2 cut(s) 217, 567
Hpy188III TCNNGA 2 cut(s) 522, 606
Hpy8I GTNNAC 2 cut(s) 416, 592
Hpy99I CGWCG 2 cut(s) 76, 188
HpyAV CCTTC 2 cut(s) 87, 190
HpyCH4III ACNGT 2 cut(s) 321, 420
HpyCH4IV ACGT 2 cut(s) 6, 161
HpyF10VI GCNNNNNNNGC 3 cut(s) 33, 321, 404
HpySE526I ACGT 2 cut(s) 6, 161
Hsp92I GRCGYC 3 cut(s) 6, 74, 186
Hsp92II CATG 5 cut(s) 26, 45, 157, 554, 609
Kzo9I GATC 1 cut(s) 524
LpnPI CCDG 7 cut(s) 313, 338, 384, 408, 417, 462, 507
Lsp1109I GCAGC 2 cut(s) 112, 346
LweI GCATC 2 cut(s) 291, 487
MaeI CTAG 1 cut(s) 581
MaeII ACGT 2 cut(s) 6, 161
MaeIII GTNAC 1 cut(s) 352
MalI GATC 1 cut(s) 526
MboI GATC 1 cut(s) 524
MboII GAAGA 1 cut(s) 506
MflI RGATCY 1 cut(s) 524
MlsI TGGCCA 1 cut(s) 27
MluCI AATT 2 cut(s) 204, 466
MluNI TGGCCA 1 cut(s) 27
MlyI GAGTC 1 cut(s) 57
MmeI TCCRAC 1 cut(s) 495
MnlI CCTC 4 cut(s) 101, 184, 271, 558
Mox20I TGGCCA 1 cut(s) 27
MscI TGGCCA 1 cut(s) 27
MseI TTAA 3 cut(s) 96, 272, 347
Msp20I TGGCCA 1 cut(s) 27
MspI CCGG 3 cut(s) 300, 395, 449
MspR9I CCNGG 2 cut(s) 395, 449
MwoI GCNNNNNNNGC 3 cut(s) 33, 321, 404
NciI CCSGG 2 cut(s) 395, 449
NdeII GATC 1 cut(s) 524
NlaIII CATG 5 cut(s) 26, 45, 157, 554, 609
NlaIV GGNNCC 1 cut(s) 526
NmeAIII GCCGAG 1 cut(s) 214
NspI RCATGY 1 cut(s) 45
PagI TCATGA 1 cut(s) 605
PciI ACATGT 1 cut(s) 41
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PfeI GAWTC 2 cut(s) 389, 440
PfoI TCCNGGA 1 cut(s) 447
PkrI GCNGC 2 cut(s) 102, 336
PleI GAGTC 1 cut(s) 57
PpsI GAGTC 1 cut(s) 57
PscI ACATGT 1 cut(s) 41
PspN4I GGNNCC 1 cut(s) 526
PspPI GGNCC 1 cut(s) 401
PsuI RGATCY 1 cut(s) 524
RsaI GTAC 3 cut(s) 164, 555, 602
RsaNI GTAC 3 cut(s) 163, 554, 601
SaqAI TTAA 3 cut(s) 96, 272, 347
SatI GCNGC 2 cut(s) 101, 335
Sau3AI GATC 1 cut(s) 524
Sau96I GGNCC 1 cut(s) 401
SchI GAGTC 1 cut(s) 57
ScrFI CCNGG 2 cut(s) 395, 449
SetI ASST 6 cut(s) 9, 105, 149, 164, 171, 586
SfaNI GCATC 2 cut(s) 291, 487
SinI GGWCC 1 cut(s) 401
Sse9I AATT 2 cut(s) 204, 466
SsiI CCGC 1 cut(s) 237
SspMI CTAG 1 cut(s) 581
StyD4I CCNGG 2 cut(s) 393, 447
TaaI ACNGT 2 cut(s) 321, 420
TaiI ACGT 2 cut(s) 9, 164
TaqII GACCGA 1 cut(s) 124
TasI AATT 2 cut(s) 204, 466
TatI WGTACW 2 cut(s) 553, 600
TfiI GAWTC 2 cut(s) 389, 440
Tru1I TTAA 3 cut(s) 96, 272, 347
Tru9I TTAA 3 cut(s) 96, 272, 347
TscAI CASTG 1 cut(s) 326
TseI GCWGC 2 cut(s) 100, 334
TspDTI ATGAA 2 cut(s) 453, 522
TspGWI ACGGA 3 cut(s) 72, 375, 517
TspRI CASTG 1 cut(s) 326
VpaK11BI GGWCC 1 cut(s) 401
XceI RCATGY 1 cut(s) 45
XmiI GTMKAC 1 cut(s) 591
XspI CTAG 1 cut(s) 581
ZraI GACGTC 1 cut(s) 7
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.