Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002366

Physical Location & Seq

Genomic Coordinates Forward (+)

16498903 .. 16502344

Gene Structure 3442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0193800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGTCGTATCTCTGAGACTACCTTCTCTGAGCTCGCTCTTCTCGCCCTCCATCTCCCGCCGTTACCCGTCAGTTCTCCGCCGTCGCCACCACCTCCGTCCGCCGCCTTCCTCCGCAAGTTTCTCAGCTCAGAGCACTGCGCCGGCGACCGACGTCGTCGACAGTCGGAAGAGCAACCAGAAAGTCCAGGAAGGCGGCGTCACTCCTCGGTCGCAGGACTTCAATGCTTGGTACCTCGACGTCATTGCAAATGCGGAGCTTGCAGATTACGGTCCGGTTCGCGGAACCATGGTGATTCGTCCCTACGGCTATGCTATCTGGGAAGCCATTCAGGATTATCTGAATGTGAAATTCAAGGAGACTGGTCACAGTAATATGTATTTCCCACAGCTTATACCATACTCGTTTATAGAGAAAGAAGCTAGTCATGTTGAGGGTTTCAGTCCTGAATTAGCACTGGTGACAATTGGAGGAGGGAAGGAGCTTGAAGAAAAGCTTGTGGTTCGACCGACAAGTGAAACGATAGTGAATCATATGTTCACTCAGTGGATTCATAGCTACCGTGATCTTCCGCTTATGGTTAACCAGTGGGCAAATGTCACAAGATGGGAGATGCGGACGAAACCTTTTGTGAGGACTCTTGAATTTCTCTGGCAGGAAGGCCATACTGCTCATGCCACTCCAGAGGAGGCGGAAAAAGAGGCTATACAGATGATTGACGTATATACAAAATTTGCTTATGAGGAAGCTGCAATACCTGTTATTGCAGGTCGAAAATCAAAAGTGGAAACATTTGCTGGTGCTGTTAGGACCTACACGATAGAGGCTATGATGGGTGATCGGAAGGCATTGCAGGCTGGAACCAGCCACAATCTTGGGCAGAATTTCTCTCGTGCCTTTGGAACACTGTTTACTGATGAAAGTGGACAGAGGCAACATGTTTGGCAGACTTCCTGGGCTGTGAGTACCCGTTTTGTTGGTGGTATTATAATGACCCATGGAGACGACACCGGTTTAATGCTTCCCCCAAAGATTGCTCCAATACAGGTGGTGATCGTACCCATTTGGAAGAAGGAAGATGATAAAGCAGGAGTTCTCAATGCTGCATCATCTGTAAAGGATGCACTGCATACTGCTGGGATTAAAGTTAAACTCGATGACACTGATCAAAGAACCCCAGGATGGAAATTTAATTTCTGGGAGATGAAGGGAGTCCCTTTAAGGATTGAAATTGGTCCTCGTGATGTATCAAGCCAGAGCGTGGTTGTATGCAGAAGAGATGTTCCTGGAAAGCAAGGGAAGGTTTTTGGAATATCCATGGAGCCTTCAATTTTGGAGGCTTATATCAAGGACAAGTTGGATGAGATCCAGTCATCTCTTTTGGGACAAGCAACATCATTTCGTGATAGCAATATTGTGGATGTGAGCTCATATGATGAACTCAAAGTTGCAATCTCCCAGGGAAAATGGGCAAGAGGTCCTTGGTCAGCTAGTGACAAAGATGAGTTGAAGGTGAAAGAAGAAACAGGGGCAACCATAAGGTGTTTTCCTTTTGACCAGCCGCATGGGATTAAAACATGTTTGATGACTAGCAATCCTGCAGAGGAAGTTGCCATTTTCGCAAAGTCATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 map00230 map00730 map01100

Pfam Domains

Protein Families

NTPase_1

Protein Analysis

544

Amino Acids

60.88

Weight (kDa)

6.91

Isoelectric Point (pI)

39.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2b	PF00587	161 - 330	2.2e-20	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	349 - 429	3.7e-16	Anticodon binding domain
ProRS-C_1	PF09180	478 - 544	1.5e-18	Prolyl-tRNA synthetase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66005 AT5G66005 AT5G66005 AT5G66005 AT5G66005 AT5G66005 AT5G66005 AT5G66005
fragaria_vesca	FvH4_1g10330 FvH4_1g10330 FvH4_1g10330 FvH4_1g10330
malus_domestica	MD15G1231300.v1.1 MD15G1231400.v1.1
prunus_persica	Prupe.7G182900_v2.0.a1 Prupe.7G182900_v2.0.a1
pyrus_communis	pycom15g20620
rosa_chinensis	RchiOBHm_Chr1g0346531 RchiOBHm_Chr2g0090391 RchiOBHm_Chr2g0097181 RchiOBHm_Chr5g0015201 RchiOBHm_Chr5g0047551 RchiOBHm_Chr7g0209931
rosa_laevigata	RLG00000016711
rosa_multiflora	Rmu_sc0001182.1_g000010
rosa_roxburghii	Rroxscaffold_2G00144900
rosa_rugosa	Rorug02G0065400 Rorug07G0193800
rosa_samantha	Rh2AG112000 Rh2AG661300 Rh2BG114200 Rh2CG116300 Rh2DG115500 Rh2DG685800 Rh5BG224100 Rh5DG335100 Rh5DG478200 Rh7BG325800 Rh7DG175600
rosa_wichuraiana	Rw2G008720 Rw2G037870 Rw6G004020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	989
AatII	GACGTC	2 cut(s)	156, 243
Acc36I	ACCTGC	1 cut(s)	758
Acc65I	GGTACC	1 cut(s)	231
AccB1I	GGYRCC	1 cut(s)	231
AccB7I	CCANNNNNTGG	1 cut(s)	1261
AccI	GTMKAC	1 cut(s)	159
AccII	CGCG	1 cut(s)	282
AclWI	GGATC	1 cut(s)	1360
AcsI	RAATTY	5 cut(s)	350, 644, 731, 883, 1187
AcyI	GRCGYC	3 cut(s)	153, 198, 240
AdeI	CACNNNGTG	1 cut(s)	546
AfaI	GTAC	3 cut(s)	233, 967, 1059
AfiI	CCNNNNNNNGG	3 cut(s)	281, 1182, 1261
AflIII	ACRYGT	2 cut(s)	937, 1577
AgeI	ACCGGT	1 cut(s)	1010
AgsI	TTSAA	7 cut(s)	223, 355, 488, 644, 1229, 1329, 1510
AjnI	CCWGG	5 cut(s)	186, 953, 1177, 1285, 1458
Alw21I	GWGCWC	3 cut(s)	35, 137, 1430
Alw26I	GTCTC	3 cut(s)	10, 353, 996
AlwI	GGATC	1 cut(s)	1360
AoxI	GGCC	1 cut(s)	661
ApeKI	GCWGC	2 cut(s)	749, 1103
ApoI	RAATTY	5 cut(s)	350, 644, 731, 883, 1187
AsiGI	ACCGGT	1 cut(s)	1010
Asp700I	GAANNNNTTC	1 cut(s)	327
Asp718I	GGTACC	1 cut(s)	231
AspLEI	GCGC	1 cut(s)	142
AspS9I	GGNCC	4 cut(s)	272, 810, 1235, 1478
AsuHPI	GGTGA	5 cut(s)	304, 472, 848, 1063, 1525
AvaII	GGWCC	4 cut(s)	272, 810, 1235, 1478
BanI	GGYRCC	1 cut(s)	231
BanII	GRGCYC	2 cut(s)	35, 1430
BarI	GAAGNNNNNNTAC	2 cut(s)	738, 770
BauI	CACGAG	2 cut(s)	891, 1239
Bbv12I	GWGCWC	3 cut(s)	35, 137, 1430
BbvI	GCAGC	2 cut(s)	736, 1090
BccI	CCATC	4 cut(s)	59, 600, 826, 1176
BceAI	ACGGC	3 cut(s)	45, 66, 322
BcgI	CGANNNNNNTGC	2 cut(s)	227, 261
BciT130I	CCWGG	5 cut(s)	188, 955, 1179, 1287, 1460
BclI	TGATCA	1 cut(s)	1165
BcoDI	GTCTC	3 cut(s)	10, 353, 996
BfaI	CTAG	3 cut(s)	423, 1491, 1590
BfmI	CTRYAG	1 cut(s)	1599
BfuAI	ACCTGC	1 cut(s)	758
BisI	GCNGC	5 cut(s)	104, 196, 750, 1104, 1562
BlsI	GCNGC	5 cut(s)	105, 197, 751, 1105, 1563
Bme1390I	CCNGG	5 cut(s)	188, 955, 1179, 1287, 1460
Bme18I	GGWCC	4 cut(s)	272, 810, 1235, 1478
BmgT120I	GGNCC	4 cut(s)	272, 810, 1235, 1478
BmiI	GGNNCC	4 cut(s)	233, 286, 862, 1323
BmrFI	CCNGG	5 cut(s)	188, 955, 1179, 1287, 1460
BmsI	GCATC	3 cut(s)	603, 1111, 1115
BoxI	GACNNNNGTC	1 cut(s)	152
BpmI	CTGGAG	1 cut(s)	666
BsaHI	GRCGYC	3 cut(s)	153, 198, 240
BsaJI	CCNNGG	9 cut(s)	206, 288, 954, 997, 1177, 1317, 1458, 1459, 1481
BsaWI	WCCGGW	2 cut(s)	274, 1010
Bsc4I	CCNNNNNNNGG	3 cut(s)	281, 1182, 1261
Bse118I	RCCGGY	2 cut(s)	142, 1010
Bse1I	ACTGG	4 cut(s)	367, 462, 586, 1369
Bse3DI	GCAATG	2 cut(s)	243, 848
BseBI	CCWGG	5 cut(s)	188, 955, 1179, 1287, 1460
BseDI	CCNNGG	9 cut(s)	206, 288, 954, 997, 1177, 1317, 1458, 1459, 1481
BseGI	GGATG	4 cut(s)	1126, 1187, 1366, 1426
BseLI	CCNNNNNNNGG	3 cut(s)	281, 1182, 1261
BseMI	GCAATG	2 cut(s)	243, 848
BseMII	CTCAG	5 cut(s)	5, 20, 138, 143, 557
BseNI	ACTGG	4 cut(s)	367, 462, 586, 1369
BseRI	GAGGAG	3 cut(s)	195, 486, 701
BseXI	GCAGC	2 cut(s)	736, 1090
BseYI	CCCAGC	1 cut(s)	1136
Bsh1236I	CGCG	1 cut(s)	282
Bsh1285I	CGRYCG	3 cut(s)	150, 212, 509
BshFI	GGCC	1 cut(s)	663
BshNI	GGYRCC	1 cut(s)	231
BshTI	ACCGGT	1 cut(s)	1010
BsiEI	CGRYCG	3 cut(s)	150, 212, 509
BsiHKAI	GWGCWC	3 cut(s)	35, 137, 1430
BsiSI	CCGG	3 cut(s)	143, 275, 1011
BslFI	GGGAC	3 cut(s)	285, 1199, 1398
BslI	CCNNNNNNNGG	3 cut(s)	281, 1182, 1261
BsmAI	GTCTC	3 cut(s)	10, 353, 996
BsmBI	CGTCTC	1 cut(s)	996
BsmFI	GGGAC	3 cut(s)	285, 1199, 1398
BsnI	GGCC	1 cut(s)	663
Bsp1286I	GDGCHC	3 cut(s)	35, 137, 1430
Bsp143I	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
Bsp19I	CCATGG	3 cut(s)	288, 997, 1317
BspANI	GGCC	1 cut(s)	663
BspCNI	CTCAG	5 cut(s)	6, 21, 137, 142, 556
BspFNI	CGCG	1 cut(s)	282
BspLI	GGNNCC	4 cut(s)	233, 286, 862, 1323
BspMAI	CTGCAG	1 cut(s)	1603
BspMI	ACCTGC	1 cut(s)	758
BspPI	GGATC	1 cut(s)	1360
BspQI	GCTCTTC	2 cut(s)	44, 164
BspT107I	GGYRCC	1 cut(s)	231
BsrDI	GCAATG	2 cut(s)	243, 848
BsrFI	RCCGGY	2 cut(s)	142, 1010
BsrI	ACTGG	4 cut(s)	367, 462, 586, 1369
BssAI	RCCGGY	2 cut(s)	142, 1010
BssECI	CCNNGG	9 cut(s)	206, 288, 954, 997, 1177, 1317, 1458, 1459, 1481
BssMI	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
BssNI	GRCGYC	3 cut(s)	153, 198, 240
BssSI	CACGAG	2 cut(s)	891, 1239
BssT1I	CCWWGG	4 cut(s)	288, 997, 1317, 1481
Bst2BI	CACGAG	2 cut(s)	891, 1239
Bst2UI	CCWGG	5 cut(s)	188, 955, 1179, 1287, 1460
Bst4CI	ACNGT	5 cut(s)	164, 272, 371, 563, 909
Bst6I	CTCTTC	3 cut(s)	44, 164, 1270
BstACI	GRCGYC	3 cut(s)	153, 198, 240
BstC8I	GCNNGC	4 cut(s)	35, 144, 261, 855
BstDEI	CTNAG	5 cut(s)	14, 29, 124, 129, 543
BstDSI	CCRYGG	3 cut(s)	288, 997, 1317
BstF5I	GGATG	4 cut(s)	1126, 1187, 1366, 1426
BstFNI	CGCG	1 cut(s)	282
BstHHI	GCGC	1 cut(s)	142
BstKTI	GATC	5 cut(s)	568, 841, 1056, 1168, 1368
BstMAI	GTCTC	3 cut(s)	10, 353, 996
BstMBI	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
BstMCI	CGRYCG	3 cut(s)	150, 212, 509
BstMWI	GCNNNNNNNGC	4 cut(s)	43, 260, 854, 1619
BstNI	CCWGG	5 cut(s)	188, 955, 1179, 1287, 1460
BstNSI	RCATGY	2 cut(s)	941, 1581
BstPAI	GACNNNNGTC	1 cut(s)	152
BstSCI	CCNGG	5 cut(s)	186, 953, 1177, 1285, 1458
BstSFI	CTRYAG	1 cut(s)	1599
BstUI	CGCG	1 cut(s)	282
BstV1I	GCAGC	2 cut(s)	736, 1090
BstX2I	RGATCY	1 cut(s)	1365
BstXI	CCANNNNNNTGG	2 cut(s)	875, 1565
BstYI	RGATCY	1 cut(s)	1365
BsuRI	GGCC	1 cut(s)	663
BtgI	CCRYGG	3 cut(s)	288, 997, 1317
BtsCI	GGATG	4 cut(s)	1126, 1187, 1366, 1426
BtsI	GCAGTG	2 cut(s)	135, 1124
BtsIMutI	CAGTG	7 cut(s)	135, 455, 551, 593, 905, 1124, 1161
BveI	ACCTGC	1 cut(s)	758
Cac8I	GCNNGC	4 cut(s)	35, 144, 261, 855
CfoI	GCGC	1 cut(s)	142
Cfr10I	RCCGGY	2 cut(s)	142, 1010
Cfr13I	GGNCC	4 cut(s)	272, 810, 1235, 1478
CpoI	CGGWCCG	1 cut(s)	272
CseI	GACGC	1 cut(s)	187
Csp6I	GTAC	3 cut(s)	232, 966, 1058
CspAI	ACCGGT	1 cut(s)	1010
CspCI	CAANNNNNGTGG	2 cut(s)	1029, 1064
CspI	CGGWCCG	1 cut(s)	272
CviAII	CATG	8 cut(s)	289, 428, 674, 938, 998, 1318, 1565, 1578
CviQI	GTAC	3 cut(s)	232, 966, 1058
DdeI	CTNAG	5 cut(s)	14, 29, 124, 129, 543
DpnI	GATC	5 cut(s)	567, 840, 1055, 1167, 1367
DpnII	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
DraIII	CACNNNGTG	1 cut(s)	546
Eam1104I	CTCTTC	3 cut(s)	44, 164, 1270
EarI	CTCTTC	3 cut(s)	44, 164, 1270
EciI	GGCGGA	3 cut(s)	68, 90, 707
Ecl136II	GAGCTC	2 cut(s)	33, 1428
Eco130I	CCWWGG	4 cut(s)	288, 997, 1317, 1481
Eco24I	GRGCYC	2 cut(s)	35, 1430
Eco47I	GGWCC	4 cut(s)	272, 810, 1235, 1478
Eco53kI	GAGCTC	2 cut(s)	33, 1428
EcoICRI	GAGCTC	2 cut(s)	33, 1428
EcoO109I	RGGNCCY	2 cut(s)	810, 1478
EcoRII	CCWGG	5 cut(s)	186, 953, 1177, 1285, 1458
EcoT14I	CCWWGG	4 cut(s)	288, 997, 1317, 1481
EcoT38I	GRGCYC	2 cut(s)	35, 1430
ErhI	CCWWGG	4 cut(s)	288, 997, 1317, 1481
Esp3I	CGTCTC	1 cut(s)	996
FaeI	CATG	8 cut(s)	292, 431, 677, 941, 1001, 1321, 1568, 1581
FalI	AAGNNNNNCTT	4 cut(s)	480, 512, 1465, 1497
FaqI	GGGAC	3 cut(s)	285, 1199, 1398
FatI	CATG	8 cut(s)	288, 427, 673, 937, 997, 1317, 1564, 1577
FauI	CCCGC	1 cut(s)	65
FauNDI	CATATG	2 cut(s)	534, 1432
FbaI	TGATCA	1 cut(s)	1165
FblI	GTMKAC	1 cut(s)	159
Fnu4HI	GCNGC	5 cut(s)	104, 196, 750, 1104, 1562
FokI	GGATG	4 cut(s)	1133, 1194, 1373, 1433
FriOI	GRGCYC	2 cut(s)	35, 1430
Fsp4HI	GCNGC	5 cut(s)	104, 196, 750, 1104, 1562
FspBI	CTAG	3 cut(s)	423, 1491, 1590
GlaI	GCGC	1 cut(s)	141
GluI	GCNGC	5 cut(s)	104, 196, 750, 1104, 1562
GsaI	CCCAGC	1 cut(s)	1140
GsuI	CTGGAG	1 cut(s)	666
HaeIII	GGCC	1 cut(s)	663
HapII	CCGG	3 cut(s)	143, 275, 1011
HgaI	GACGC	1 cut(s)	187
HhaI	GCGC	1 cut(s)	142
Hin1I	GRCGYC	3 cut(s)	153, 198, 240
Hin1II	CATG	8 cut(s)	292, 431, 677, 941, 1001, 1321, 1568, 1581
Hin6I	GCGC	1 cut(s)	140
HinP1I	GCGC	1 cut(s)	140
HincII	GTYRAC	2 cut(s)	160, 583
HindII	GTYRAC	2 cut(s)	160, 583
HindIII	AAGCTT	1 cut(s)	494
HinfI	GANTC	5 cut(s)	295, 529, 550, 637, 1212
HpaI	GTTAAC	1 cut(s)	583
HpaII	CCGG	3 cut(s)	143, 275, 1011
HphI	GGTGA	5 cut(s)	304, 472, 848, 1063, 1525
Hpy166II	GTNNAC	5 cut(s)	160, 540, 583, 912, 926
Hpy188I	TCNGA	6 cut(s)	15, 30, 132, 168, 342, 843
Hpy188III	TCNNGA	6 cut(s)	332, 446, 641, 683, 1241, 1403
Hpy8I	GTNNAC	5 cut(s)	160, 540, 583, 912, 926
Hpy99I	CGWCG	5 cut(s)	87, 155, 158, 161, 242
HpyCH4III	ACNGT	5 cut(s)	164, 272, 371, 563, 909
HpyCH4IV	ACGT	3 cut(s)	153, 240, 720
HpyF10VI	GCNNNNNNNGC	4 cut(s)	43, 260, 854, 1619
HpyF3I	CTNAG	5 cut(s)	14, 29, 124, 129, 543
HpySE526I	ACGT	3 cut(s)	153, 240, 720
Hsp92I	GRCGYC	3 cut(s)	153, 198, 240
Hsp92II	CATG	8 cut(s)	292, 431, 677, 941, 1001, 1321, 1568, 1581
HspAI	GCGC	1 cut(s)	140
KpnI	GGTACC	1 cut(s)	235
KroI	GCCGGC	1 cut(s)	142
KroNI	GCCGGC	1 cut(s)	144
Ksp22I	TGATCA	1 cut(s)	1165
KspAI	GTTAAC	1 cut(s)	583
Kzo9I	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
LguI	GCTCTTC	2 cut(s)	44, 164
LmnI	GCTCC	4 cut(s)	256, 481, 1042, 1321
Lsp1109I	GCAGC	2 cut(s)	736, 1090
LweI	GCATC	3 cut(s)	603, 1111, 1115
MaeI	CTAG	3 cut(s)	423, 1491, 1590
MaeII	ACGT	3 cut(s)	153, 240, 720
MaeIII	GTNAC	6 cut(s)	62, 199, 365, 460, 598, 1493
MalI	GATC	5 cut(s)	567, 840, 1055, 1167, 1367
MboI	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
MboII	GAAGA	8 cut(s)	31, 181, 500, 560, 1081, 1088, 1287, 1532
MfeI	CAATTG	1 cut(s)	465
MflI	RGATCY	1 cut(s)	1365
MhlI	GDGCHC	3 cut(s)	35, 137, 1430
MlyI	GAGTC	2 cut(s)	631, 1221
MmeI	TCCRAC	2 cut(s)	146, 1338
MreI	CGCCGGCG	1 cut(s)	142
MroNI	GCCGGC	1 cut(s)	142
MroXI	GAANNNNTTC	1 cut(s)	327
MseI	TTAA	7 cut(s)	582, 1016, 1143, 1149, 1191, 1220, 1572
MspI	CCGG	3 cut(s)	143, 275, 1011
MspR9I	CCNGG	5 cut(s)	188, 955, 1179, 1287, 1460
MunI	CAATTG	1 cut(s)	465
MvaI	CCWGG	5 cut(s)	188, 955, 1179, 1287, 1460
MvnI	CGCG	1 cut(s)	282
MwoI	GCNNNNNNNGC	4 cut(s)	43, 260, 854, 1619
NaeI	GCCGGC	1 cut(s)	144
NcoI	CCATGG	3 cut(s)	288, 997, 1317
NdeI	CATATG	2 cut(s)	534, 1432
NdeII	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
NgoMIV	GCCGGC	1 cut(s)	142
NlaIII	CATG	8 cut(s)	292, 431, 677, 941, 1001, 1321, 1568, 1581
NlaIV	GGNNCC	4 cut(s)	233, 286, 862, 1323
NmuCI	GTSAC	5 cut(s)	199, 365, 460, 598, 1493
NspI	RCATGY	2 cut(s)	941, 1581
PasI	CCCWGGG	1 cut(s)	1459
PciI	ACATGT	2 cut(s)	937, 1577
PciSI	GCTCTTC	2 cut(s)	44, 164
PdiI	GCCGGC	1 cut(s)	144
PdmI	GAANNNNTTC	1 cut(s)	327
PfeI	GAWTC	3 cut(s)	295, 529, 550
PflFI	GACNNNGTC	1 cut(s)	155
PflMI	CCANNNNNTGG	1 cut(s)	1261
PfoI	TCCNGGA	2 cut(s)	186, 1285
PinAI	ACCGGT	1 cut(s)	1010
PkrI	GCNGC	5 cut(s)	105, 197, 751, 1105, 1563
PleI	GAGTC	2 cut(s)	631, 1220
PpsI	GAGTC	2 cut(s)	631, 1220
PpuMI	RGGWCCY	2 cut(s)	810, 1478
PscI	ACATGT	2 cut(s)	937, 1577
PshAI	GACNNNNGTC	1 cut(s)	152
PsiI	TTATAA	1 cut(s)	989
Psp124BI	GAGCTC	2 cut(s)	35, 1430
Psp5II	RGGWCCY	2 cut(s)	810, 1478
Psp6I	CCWGG	5 cut(s)	186, 953, 1177, 1285, 1458
PspFI	CCCAGC	1 cut(s)	1136
PspGI	CCWGG	5 cut(s)	186, 953, 1177, 1285, 1458
PspN4I	GGNNCC	4 cut(s)	233, 286, 862, 1323
PspPI	GGNCC	4 cut(s)	272, 810, 1235, 1478
PspPPI	RGGWCCY	2 cut(s)	810, 1478
PsrI	GAACNNNNNNTAC	2 cut(s)	895, 927
PstI	CTGCAG	1 cut(s)	1603
PsuI	RGATCY	1 cut(s)	1365
PsyI	GACNNNGTC	1 cut(s)	155
RsaI	GTAC	3 cut(s)	233, 967, 1059
RsaNI	GTAC	3 cut(s)	232, 966, 1058
Rsr2I	CGGWCCG	1 cut(s)	272
RsrII	CGGWCCG	1 cut(s)	272
SacI	GAGCTC	2 cut(s)	35, 1430
SalI	GTCGAC	1 cut(s)	158
SapI	GCTCTTC	2 cut(s)	44, 164
SaqAI	TTAA	7 cut(s)	582, 1016, 1143, 1149, 1191, 1220, 1572
SatI	GCNGC	5 cut(s)	104, 196, 750, 1104, 1562
Sau3AI	GATC	5 cut(s)	565, 838, 1053, 1165, 1365
Sau96I	GGNCC	4 cut(s)	272, 810, 1235, 1478
SchI	GAGTC	2 cut(s)	631, 1221
ScrFI	CCNGG	5 cut(s)	188, 955, 1179, 1287, 1460
SduI	GDGCHC	3 cut(s)	35, 137, 1430
SfaNI	GCATC	3 cut(s)	603, 1111, 1115
SfcI	CTRYAG	1 cut(s)	1599
SgrAI	CRCCGGYG	1 cut(s)	142
SinI	GGWCC	4 cut(s)	272, 810, 1235, 1478
SspI	AATATT	1 cut(s)	1414
SspMI	CTAG	3 cut(s)	423, 1491, 1590
SstI	GAGCTC	2 cut(s)	35, 1430
StyD4I	CCNGG	5 cut(s)	186, 953, 1177, 1285, 1458
StyI	CCWWGG	4 cut(s)	288, 997, 1317, 1481
TaaI	ACNGT	5 cut(s)	164, 272, 371, 563, 909
TaiI	ACGT	3 cut(s)	156, 243, 723
TaqI	TCGA	5 cut(s)	159, 237, 505, 772, 1155
TaqII	GACCGA	3 cut(s)	164, 198, 523
TauI	GCSGC	3 cut(s)	106, 198, 1564
TfiI	GAWTC	3 cut(s)	295, 529, 550
Tru1I	TTAA	7 cut(s)	582, 1016, 1143, 1149, 1191, 1220, 1572
Tru9I	TTAA	7 cut(s)	582, 1016, 1143, 1149, 1191, 1220, 1572
TscAI	CASTG	7 cut(s)	142, 462, 551, 593, 912, 1131, 1168
TseFI	GTSAC	5 cut(s)	199, 365, 460, 598, 1493
TseI	GCWGC	2 cut(s)	749, 1103
Tsp45I	GTSAC	5 cut(s)	199, 365, 460, 598, 1493
TspDTI	ATGAA	4 cut(s)	542, 933, 1220, 1452
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	7 cut(s)	142, 462, 551, 593, 912, 1131, 1168
Tth111I	GACNNNGTC	1 cut(s)	155
Van91I	CCANNNNNTGG	1 cut(s)	1261
VpaK11BI	GGWCC	4 cut(s)	272, 810, 1235, 1478
XapI	RAATTY	5 cut(s)	350, 644, 731, 883, 1187
XceI	RCATGY	2 cut(s)	941, 1581
XmiI	GTMKAC	1 cut(s)	159
XmnI	GAANNNNTTC	1 cut(s)	327
XspI	CTAG	3 cut(s)	423, 1491, 1590
ZraI	GACGTC	2 cut(s)	154, 241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.