Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002138

Physical Location & Seq

Genomic Coordinates Forward (+)

18874192 .. 18880079

Gene Structure 5888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0213400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGGCAAGCAAGGGCCCTGCTATCACTGTGGAGTTACAAGCACCCCCCTTTGGCGCAATGGGCCACCTGAAAAGCCAGTACTTTGCAATGCATGTGGATCTCGATGGAGGACTAAGGGAACACTTGTAAATTATACCCCTCTACATGCCCGAGCAGAACCTGAGGATTATGAAGATCACAGAGTTTCCAGGATGAAGAGCATGTCTATAAATAAAAACAAAGAAGTGAAACTGGTTAAAAGAAAGCAGCATCCTGACAGTGTAGTGGTTGGTGCTGATTACTCCCATGGGTTTCGAAAGGTAGTTGATGAAGATACAAGTAATAGATCCAGTTCTGGGTCTGCTGTGTCTAACACTGAAAGCTGTGCACACTTTGGGAGTGCAGATGCAAGTGATTTGACAGGTCCTGCTCAGTCAATGGTGTGGGACTCAACAGTACCTTCTAGGAAAAGGACCTGTGTCGGTCGTCCAAAGCAATCTCCTGTTGAAAAGCTCACAAAAGATCTATATACTATTTTACATGAACAACAGTCTTCTTACTTCTCTGGGTCTTCTGAAGAGGATCTACTTTTTGAGAGTGAAACACCTATGGTCTCTGTTGAGATAGGACATGGAAGTGTTCTCATAAGGCATCCCAGCTCAATAGCCCGAGAAGAGGAATCTGAAGCTAGCTCACTTTCAGTTGATAACAGGCAGTGCCATATAAATGAGGCTTATTCCCATTCTGCATCCCTTTTTGTACATAATAACAAGGGTGTAAATATGTCCAGCACTGTGATTGGAAAGATGAATAGCCCTGCAGGACAAGGGATGCAACAAGAGCCACTGAAAAGGGACAAGTCACAGCATGACAACTTCCAAATCTTGGGAAACCATAATTCACCACTTCGTCATATAGATTTGAATGATATTGTAAATTATGAAGAGTTCATGAGGCAGTTGACAAATGAAGAGCAACAGCAATTACTGAAGCATCTATCTCCAGTGGATGTCAAGTTTCCTTATAGCCTCAGAAATATGTTTGATAGCCCTCAGTTCAGAGAGAACTTAACTTCCTTTCAGCAACTGCTTGCAGAAGGGGTCTTTGATATCTCCCTCCCAGGGGCAAAAACTGAAGACTGTAAGACTTTGAAAAGGCTTGCATTATCCAATTCTTCGAAATCTAAGTGGGTTGAACGCTATCATCTTATCAAGAAGTGTAAAACTACCTCCGGAAAGTCTGTTGTCTCTGGATCTAACTTCACCACATCTAGTAATTTTCGACAAGTCAAGAGACTGCGGGATAGTGAGACTCGAAGCTTTCCAGATGTAAAGATTGTGATGAAGAGCCCCAAAAGGGTAATCATGAAGGGGGGCTATGAAAACAAGGATATCCTAGACTATGATGGTTCTTGCTTTAGTCCAAAAAGCCTCTTTGCTTTGCCTCCTGATGGTAGCTCTCTCATGCTGGATTCCATGAGTTTTGTCGAAGAAAATTCTGACCAGGTTCTTCTGCTGGATATTCCATCCAATGGATCCTACCCCCAAGCAGAGCTTCTTCACCCAGCCTTGAGTTTTGGTTCCCAACAAGCAAGCACTAGTAGTAGCTCAATATACCCACATCTACTCCATCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000105 GO:0003674 GO:0003824 GO:0004635 GO:0004636 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006547 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016462 GO:0016787 GO:0016810 GO:0016814 GO:0016817 GO:0016818 GO:0018130 GO:0019238 GO:0019438 GO:0019752 GO:0034641 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046483 GO:0052803 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00340 ko01100 ko01110 ko01230 map00340 map01100 map01110 map01230

Pfam Domains

Protein Families

PRA-CH PRA-PH

Protein Analysis

538

Amino Acids

59.97

Weight (kDa)

7.64

Isoelectric Point (pI)

59.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	7 - 41	4.6e-14	GATA zinc finger
ASXH	PF13919	279 - 363	9.6e-09	Asx homology domain
RPN13_C	PF16550	296 - 362	1.1e-06	UCH-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31860 AT1G31860 AT1G31860
fragaria_vesca	FvH4_3g33130 FvH4_3g33130 FvH4_3g33130 FvH4_6g09080 FvH4_6g09080 FvH4_6g09080 FvH4_6g09080
malus_domestica	MD03G1104300.v1.1 MD03G1104400.v1.1 MD03G1104500.v1.1 MD11G1131000.v1.1
prunus_persica	Prupe.6G095300_v2.0.a1 Prupe.6G095300_v2.0.a1
pyrus_communis	pycom11g10830
rosa_chinensis	RchiOBHm_Chr5g0060441 RchiOBHm_Chr5g0060451 RchiOBHm_Chr7g0223141
rosa_laevigata	RLG00000001998 RLG00000018676 RLG00000035364
rosa_multiflora	Rmu_sc0012322.1_g000002 Rmu_sc0034987.1_g000001
rosa_roxburghii	Rroxscaffold_1G00020380 Rroxscaffold_2G00121710 Rroxscaffold_3G00236060
rosa_rugosa	Rorug05G0330100 Rorug05G0330200 Rorug05G0330300 Rorug05G0330400 Rorug07G0213400
rosa_samantha	Rh5AG394800 Rh5BG407000 Rh5CG430800 Rh5CG430900 Rh5DG422000 Rh7AG358500 Rh7BG346600 Rh7CG376900 Rh7DG353900
rosa_wichuraiana	Rw5G037130 Rw7G030500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	865, 1511
AccIII	TCCGGA	1 cut(s)	1211
AciI	CCGC	1 cut(s)	1279
AclWI	GGATC	6 cut(s)	106, 321, 570, 1240, 1509, 1522
AcsI	RAATTY	1 cut(s)	1474
AcuI	CTGAAG	4 cut(s)	576, 684, 989, 1134
AfaI	GTAC	3 cut(s)	81, 438, 741
AfiI	CCNNNNNNNGG	9 cut(s)	51, 336, 655, 865, 1101, 1102, 1336, 1430, 1511
AgsI	TTSAA	4 cut(s)	488, 904, 1132, 1175
AhlI	ACTAGT	1 cut(s)	1577
AjnI	CCWGG	3 cut(s)	188, 1099, 1482
AjuI	GAANNNNNNNTTGG	2 cut(s)	1518, 1550
AloI	GAACNNNNNNTCC	2 cut(s)	1037, 1069
AluBI	AGCT	9 cut(s)	363, 493, 639, 668, 672, 1299, 1437, 1534, 1587
AluI	AGCT	9 cut(s)	363, 493, 639, 668, 672, 1299, 1437, 1534, 1587
Alw21I	GWGCWC	1 cut(s)	370
Alw26I	GTCTC	4 cut(s)	598, 1231, 1267, 1283
Alw44I	GTGCAC	1 cut(s)	366
AlwI	GGATC	6 cut(s)	106, 321, 570, 1240, 1509, 1522
AlwNI	CAGNNNCTG	3 cut(s)	161, 407, 1066
Ama87I	CYCGRG	2 cut(s)	150, 648
Aor13HI	TCCGGA	1 cut(s)	1211
AoxI	GGCC	2 cut(s)	14, 62
ApaI	GGGCCC	1 cut(s)	18
ApaLI	GTGCAC	1 cut(s)	366
ApeKI	GCWGC	1 cut(s)	247
ApoI	RAATTY	1 cut(s)	1474
AspLEI	GCGC	1 cut(s)	57
AspS9I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
AsuHPI	GGTGA	3 cut(s)	873, 1234, 1532
AsuII	TTCGAA	2 cut(s)	295, 1157
AsuNHI	GCTAGC	1 cut(s)	668
AvaI	CYCGRG	2 cut(s)	150, 648
AvaII	GGWCC	2 cut(s)	404, 453
AxyI	CCTNAGG	1 cut(s)	162
BaeGI	GKGCMC	2 cut(s)	18, 370
BamHI	GGATCC	1 cut(s)	1514
BanII	GRGCYC	2 cut(s)	18, 1331
BarI	GAAGNNNNNNTAC	2 cut(s)	549, 581
BbsI	GAAGAC	3 cut(s)	525, 543, 1122
Bbv12I	GWGCWC	1 cut(s)	370
BbvI	GCAGC	1 cut(s)	259
BccI	CCATC	4 cut(s)	99, 1379, 1424, 1513
BciT130I	CCWGG	3 cut(s)	190, 1101, 1484
BcoDI	GTCTC	4 cut(s)	598, 1231, 1267, 1283
BcuI	ACTAGT	1 cut(s)	1577
BfaI	CTAG	5 cut(s)	444, 669, 1251, 1376, 1578
BfmI	CTRYAG	1 cut(s)	798
BglII	AGATCT	1 cut(s)	502
BisI	GCNGC	1 cut(s)	248
BlsI	GCNGC	1 cut(s)	249
BmcAI	AGTACT	1 cut(s)	81
Bme1390I	CCNGG	3 cut(s)	190, 1101, 1484
Bme18I	GGWCC	2 cut(s)	404, 453
BmeT110I	CYCGRG	2 cut(s)	150, 648
BmgT120I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
BmiI	GGNNCC	3 cut(s)	16, 1516, 1561
BmrFI	CCNGG	3 cut(s)	190, 1101, 1484
BmsI	GCATC	6 cut(s)	259, 376, 640, 737, 801, 982
BmtI	GCTAGC	1 cut(s)	672
BoxI	GACNNNNGTC	1 cut(s)	458
BpiI	GAAGAC	3 cut(s)	525, 543, 1122
BpmI	CTGGAG	1 cut(s)	966
Bpu14I	TTCGAA	2 cut(s)	295, 1157
BpuEI	CTTGAG	1 cut(s)	1570
BsaI	GGTCTC	1 cut(s)	598
BsaJI	CCNNGG	3 cut(s)	286, 1099, 1100
BsaWI	WCCGGW	1 cut(s)	1211
BsaXI	ACNNNNNCTCC	1 cut(s)	1590
Bsc4I	CCNNNNNNNGG	9 cut(s)	51, 336, 655, 865, 1101, 1102, 1336, 1430, 1511
Bse1I	ACTGG	4 cut(s)	77, 237, 330, 983
Bse21I	CCTNAGG	1 cut(s)	162
Bse3DI	GCAATG	2 cut(s)	64, 94
BseAI	TCCGGA	1 cut(s)	1211
BseBI	CCWGG	3 cut(s)	190, 1101, 1484
BseDI	CCNNGG	3 cut(s)	286, 1099, 1100
BseGI	GGATG	8 cut(s)	198, 250, 631, 728, 816, 994, 1505, 1609
BseLI	CCNNNNNNNGG	9 cut(s)	51, 336, 655, 865, 1101, 1102, 1336, 1430, 1511
BseMI	GCAATG	2 cut(s)	64, 94
BseMII	CTCAG	4 cut(s)	153, 425, 1024, 1046
BseNI	ACTGG	4 cut(s)	77, 237, 330, 983
BseSI	GKGCMC	2 cut(s)	18, 370
BseXI	GCAGC	1 cut(s)	259
BseYI	CCCAGC	2 cut(s)	635, 1543
BsgI	GTGCAG	1 cut(s)	402
Bsh1285I	CGRYCG	1 cut(s)	466
BshFI	GGCC	2 cut(s)	16, 64
BsiEI	CGRYCG	1 cut(s)	466
BsiHKAI	GWGCWC	1 cut(s)	370
BsiHKCI	CYCGRG	2 cut(s)	150, 648
BsiSI	CCGG	1 cut(s)	1212
BslFI	GGGAC	2 cut(s)	440, 848
BslI	CCNNNNNNNGG	9 cut(s)	51, 336, 655, 865, 1101, 1102, 1336, 1430, 1511
BsmAI	GTCTC	4 cut(s)	598, 1231, 1267, 1283
BsmFI	GGGAC	2 cut(s)	440, 848
BsnI	GGCC	2 cut(s)	16, 64
Bso31I	GGTCTC	1 cut(s)	598
BsoBI	CYCGRG	2 cut(s)	150, 648
Bsp119I	TTCGAA	2 cut(s)	295, 1157
Bsp120I	GGGCCC	1 cut(s)	14
Bsp1286I	GDGCHC	3 cut(s)	18, 370, 1331
Bsp13I	TCCGGA	1 cut(s)	1211
Bsp1407I	TGTACA	1 cut(s)	739
Bsp143I	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
Bsp19I	CCATGG	1 cut(s)	286
BspACI	CCGC	1 cut(s)	1279
BspANI	GGCC	2 cut(s)	16, 64
BspCNI	CTCAG	4 cut(s)	154, 424, 1023, 1045
BspEI	TCCGGA	1 cut(s)	1211
BspHI	TCATGA	2 cut(s)	930, 1344
BspLI	GGNNCC	3 cut(s)	16, 1516, 1561
BspMAI	CTGCAG	1 cut(s)	802
BspOI	GCTAGC	1 cut(s)	672
BspPI	GGATC	6 cut(s)	106, 321, 570, 1240, 1509, 1522
BspQI	GCTCTTC	3 cut(s)	191, 945, 1319
BspT104I	TTCGAA	2 cut(s)	295, 1157
BspTNI	GGTCTC	1 cut(s)	598
BsrDI	GCAATG	2 cut(s)	64, 94
BsrGI	TGTACA	1 cut(s)	739
BsrI	ACTGG	4 cut(s)	77, 237, 330, 983
BssECI	CCNNGG	3 cut(s)	286, 1099, 1100
BssMI	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
BssT1I	CCWWGG	1 cut(s)	286
Bst2UI	CCWGG	3 cut(s)	190, 1101, 1484
Bst4CI	ACNGT	6 cut(s)	29, 260, 436, 531, 775, 1121
Bst6I	CTCTTC	6 cut(s)	191, 552, 648, 918, 945, 1319
BstAUI	TGTACA	1 cut(s)	739
BstBI	TTCGAA	2 cut(s)	295, 1157
BstC8I	GCNNGC	5 cut(s)	8, 670, 1071, 1140, 1573
BstDEI	CTNAG	6 cut(s)	114, 162, 411, 1010, 1032, 1164
BstDSI	CCRYGG	1 cut(s)	286
BstF5I	GGATG	8 cut(s)	198, 250, 631, 728, 816, 994, 1505, 1609
BstHHI	GCGC	1 cut(s)	57
BstKTI	GATC	7 cut(s)	101, 178, 329, 505, 565, 1235, 1517
BstMAI	GTCTC	4 cut(s)	598, 1231, 1267, 1283
BstMBI	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
BstMCI	CGRYCG	1 cut(s)	466
BstMWI	GCNNNNNNNGC	2 cut(s)	61, 820
BstNI	CCWGG	3 cut(s)	190, 1101, 1484
BstNSI	RCATGY	3 cut(s)	96, 149, 205
BstPAI	GACNNNNGTC	1 cut(s)	458
BstSCI	CCNGG	3 cut(s)	188, 1099, 1482
BstSFI	CTRYAG	1 cut(s)	798
BstSLI	GKGCMC	2 cut(s)	18, 370
BstV1I	GCAGC	1 cut(s)	259
BstV2I	GAAGAC	3 cut(s)	525, 543, 1122
BstX2I	RGATCY	6 cut(s)	98, 326, 502, 562, 1232, 1514
BstYI	RGATCY	6 cut(s)	98, 326, 502, 562, 1232, 1514
Bsu36I	CCTNAGG	1 cut(s)	162
BsuRI	GGCC	2 cut(s)	16, 64
BtgI	CCRYGG	1 cut(s)	286
BtsCI	GGATG	8 cut(s)	198, 250, 631, 728, 816, 994, 1505, 1609
BtsI	GCAGTG	1 cut(s)	701
BtsIMutI	CAGTG	7 cut(s)	25, 265, 354, 701, 771, 824, 990
Cac8I	GCNNGC	5 cut(s)	8, 670, 1071, 1140, 1573
CaiI	CAGNNNCTG	3 cut(s)	161, 407, 1066
CciI	TCATGA	2 cut(s)	930, 1344
CfoI	GCGC	1 cut(s)	57
Cfr13I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
CsiI	ACCWGGT	1 cut(s)	1482
Csp6I	GTAC	3 cut(s)	80, 437, 740
CspCI	CAANNNNNGTGG	2 cut(s)	76, 111
CviQI	GTAC	3 cut(s)	80, 437, 740
DdeI	CTNAG	6 cut(s)	114, 162, 411, 1010, 1032, 1164
DpnI	GATC	7 cut(s)	100, 177, 328, 504, 564, 1234, 1516
DpnII	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
Eam1104I	CTCTTC	6 cut(s)	191, 552, 648, 918, 945, 1319
EarI	CTCTTC	6 cut(s)	191, 552, 648, 918, 945, 1319
Eco130I	CCWWGG	1 cut(s)	286
Eco24I	GRGCYC	2 cut(s)	18, 1331
Eco31I	GGTCTC	1 cut(s)	598
Eco32I	GATATC	2 cut(s)	1090, 1372
Eco47I	GGWCC	2 cut(s)	404, 453
Eco57I	CTGAAG	4 cut(s)	576, 684, 989, 1134
Eco81I	CCTNAGG	1 cut(s)	162
Eco88I	CYCGRG	2 cut(s)	150, 648
EcoO109I	RGGNCCY	4 cut(s)	14, 15, 404, 453
EcoRII	CCWGG	3 cut(s)	188, 1099, 1482
EcoRV	GATATC	2 cut(s)	1090, 1372
EcoT14I	CCWWGG	1 cut(s)	286
EcoT22I	ATGCAT	1 cut(s)	94
EcoT38I	GRGCYC	2 cut(s)	18, 1331
ErhI	CCWWGG	1 cut(s)	286
FalI	AAGNNNNNCTT	2 cut(s)	1518, 1550
FaqI	GGGAC	2 cut(s)	440, 848
FauI	CCCGC	1 cut(s)	1272
Fnu4HI	GCNGC	1 cut(s)	248
FokI	GGATG	8 cut(s)	205, 237, 618, 715, 823, 1001, 1492, 1596
FriOI	GRGCYC	2 cut(s)	18, 1331
Fsp4HI	GCNGC	1 cut(s)	248
FspBI	CTAG	5 cut(s)	444, 669, 1251, 1376, 1578
GlaI	GCGC	1 cut(s)	56
GluI	GCNGC	1 cut(s)	248
GsaI	CCCAGC	2 cut(s)	639, 1547
GsuI	CTGGAG	1 cut(s)	966
HaeIII	GGCC	2 cut(s)	16, 64
HapII	CCGG	1 cut(s)	1212
HhaI	GCGC	1 cut(s)	57
Hin6I	GCGC	1 cut(s)	55
HinP1I	GCGC	1 cut(s)	55
HincII	GTYRAC	1 cut(s)	942
HindII	GTYRAC	1 cut(s)	942
HindIII	AAGCTT	1 cut(s)	1297
HinfI	GANTC	4 cut(s)	428, 659, 1291, 1451
HpaII	CCGG	1 cut(s)	1212
HphI	GGTGA	3 cut(s)	873, 1234, 1532
Hpy166II	GTNNAC	2 cut(s)	368, 942
Hpy188I	TCNGA	5 cut(s)	556, 664, 1013, 1040, 1480
Hpy8I	GTNNAC	2 cut(s)	368, 942
HpyAV	CCTTC	3 cut(s)	450, 1070, 1342
HpyCH4III	ACNGT	6 cut(s)	29, 260, 436, 531, 775, 1121
HpyF10VI	GCNNNNNNNGC	2 cut(s)	61, 820
HpyF3I	CTNAG	6 cut(s)	114, 162, 411, 1010, 1032, 1164
HspAI	GCGC	1 cut(s)	55
Kpn2I	TCCGGA	1 cut(s)	1211
Kzo9I	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
LguI	GCTCTTC	3 cut(s)	191, 945, 1319
Lsp1109I	GCAGC	1 cut(s)	259
LweI	GCATC	6 cut(s)	259, 376, 640, 737, 801, 982
MabI	ACCWGGT	1 cut(s)	1482
MaeI	CTAG	5 cut(s)	444, 669, 1251, 1376, 1578
MaeIII	GTNAC	2 cut(s)	34, 840
MalI	GATC	7 cut(s)	100, 177, 328, 504, 564, 1234, 1516
MboI	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
MflI	RGATCY	6 cut(s)	98, 326, 502, 562, 1232, 1514
MhlI	GDGCHC	3 cut(s)	18, 370, 1331
MluCI	AATT	7 cut(s)	130, 877, 916, 962, 1150, 1255, 1474
MlyI	GAGTC	2 cut(s)	422, 1285
Mph1103I	ATGCAT	1 cut(s)	94
MroI	TCCGGA	1 cut(s)	1211
MseI	TTAA	2 cut(s)	237, 1049
MslI	CAYNNNNRTG	2 cut(s)	615, 705
MspI	CCGG	1 cut(s)	1212
MspR9I	CCNGG	3 cut(s)	190, 1101, 1484
MvaI	CCWGG	3 cut(s)	190, 1101, 1484
MwoI	GCNNNNNNNGC	2 cut(s)	61, 820
NcoI	CCATGG	1 cut(s)	286
NdeII	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
NheI	GCTAGC	1 cut(s)	668
NlaIV	GGNNCC	3 cut(s)	16, 1516, 1561
NmuCI	GTSAC	1 cut(s)	840
NsiI	ATGCAT	1 cut(s)	94
NspI	RCATGY	3 cut(s)	96, 149, 205
NspV	TTCGAA	2 cut(s)	295, 1157
PagI	TCATGA	2 cut(s)	930, 1344
PasI	CCCWGGG	1 cut(s)	1100
PciSI	GCTCTTC	3 cut(s)	191, 945, 1319
PfeI	GAWTC	2 cut(s)	659, 1451
PflMI	CCANNNNNTGG	2 cut(s)	865, 1511
PfoI	TCCNGGA	1 cut(s)	188
PkrI	GCNGC	1 cut(s)	249
PleI	GAGTC	2 cut(s)	422, 1285
PpsI	GAGTC	2 cut(s)	422, 1285
PpuMI	RGGWCCY	2 cut(s)	404, 453
PshAI	GACNNNNGTC	1 cut(s)	458
Psp5II	RGGWCCY	2 cut(s)	404, 453
Psp6I	CCWGG	3 cut(s)	188, 1099, 1482
PspFI	CCCAGC	2 cut(s)	635, 1543
PspGI	CCWGG	3 cut(s)	188, 1099, 1482
PspN4I	GGNNCC	3 cut(s)	16, 1516, 1561
PspOMI	GGGCCC	1 cut(s)	14
PspPI	GGNCC	5 cut(s)	14, 15, 62, 404, 453
PspPPI	RGGWCCY	2 cut(s)	404, 453
PstI	CTGCAG	1 cut(s)	802
PstNI	CAGNNNCTG	3 cut(s)	161, 407, 1066
PsuI	RGATCY	6 cut(s)	98, 326, 502, 562, 1232, 1514
RsaI	GTAC	3 cut(s)	81, 438, 741
RsaNI	GTAC	3 cut(s)	80, 437, 740
RseI	CAYNNNNRTG	2 cut(s)	615, 705
SapI	GCTCTTC	3 cut(s)	191, 945, 1319
SaqAI	TTAA	2 cut(s)	237, 1049
SatI	GCNGC	1 cut(s)	248
Sau3AI	GATC	7 cut(s)	98, 175, 326, 502, 562, 1232, 1514
Sau96I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
SbfI	CCTGCAGG	1 cut(s)	802
ScaI	AGTACT	1 cut(s)	81
SchI	GAGTC	2 cut(s)	422, 1285
ScrFI	CCNGG	3 cut(s)	190, 1101, 1484
SdaI	CCTGCAGG	1 cut(s)	802
SduI	GDGCHC	3 cut(s)	18, 370, 1331
SexAI	ACCWGGT	1 cut(s)	1482
SfaNI	GCATC	6 cut(s)	259, 376, 640, 737, 801, 982
SfcI	CTRYAG	1 cut(s)	798
SfuI	TTCGAA	2 cut(s)	295, 1157
SinI	GGWCC	2 cut(s)	404, 453
SmiMI	CAYNNNNRTG	2 cut(s)	615, 705
SmlI	CTYRAG	1 cut(s)	1549
SmoI	CTYRAG	1 cut(s)	1549
SpeI	ACTAGT	1 cut(s)	1577
Sse8387I	CCTGCAGG	1 cut(s)	802
Sse9I	AATT	7 cut(s)	130, 877, 916, 962, 1150, 1255, 1474
SsiI	CCGC	1 cut(s)	1279
SspMI	CTAG	5 cut(s)	444, 669, 1251, 1376, 1578
StyD4I	CCNGG	3 cut(s)	188, 1099, 1482
StyI	CCWWGG	1 cut(s)	286
TaaI	ACNGT	6 cut(s)	29, 260, 436, 531, 775, 1121
TaqI	TCGA	6 cut(s)	103, 295, 1157, 1261, 1294, 1467
TaqII	GACCGA	1 cut(s)	452
TasI	AATT	7 cut(s)	130, 877, 916, 962, 1150, 1255, 1474
TatI	WGTACW	2 cut(s)	79, 739
TfiI	GAWTC	2 cut(s)	659, 1451
Tru1I	TTAA	2 cut(s)	237, 1049
Tru9I	TTAA	2 cut(s)	237, 1049
TscAI	CASTG	7 cut(s)	32, 265, 361, 701, 778, 831, 990
TseFI	GTSAC	1 cut(s)	840
TseI	GCWGC	1 cut(s)	247
Tsp45I	GTSAC	1 cut(s)	840
TspRI	CASTG	7 cut(s)	32, 265, 361, 701, 778, 831, 990
Van91I	CCANNNNNTGG	2 cut(s)	865, 1511
VneI	GTGCAC	1 cut(s)	366
VpaK11BI	GGWCC	2 cut(s)	404, 453
XapI	RAATTY	1 cut(s)	1474
XceI	RCATGY	3 cut(s)	96, 149, 205
XspI	CTAG	5 cut(s)	444, 669, 1251, 1376, 1578
ZrmI	AGTACT	1 cut(s)	81
Zsp2I	ATGCAT	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.