mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g07530 FvH4_4g13680 FvH4_7g13310 |
| rosa_multiflora | Rmu_sc0000026.1_g000002 Rmu_sc0013866.1_g000002 Rmu_sc0020815.1_g000008 Rmu_sc0021925.1_g000001 Rmu_sc0024961.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00063090 Rroxscaffold_4G00303350 Rroxscaffold_4G00317150 |
| rosa_rugosa | Rorug01G0112100 Rorug01G0120100 Rorug01G0120400 Rorug01G0223600 |
| rosa_samantha | Rh1AG051300 Rh1AG053600 Rh1AG136000 Rh1AG237600 Rh1AG237800 Rh1AG238100 Rh1BG111500 Rh1BG207800 Rh1BG208100 Rh1BG208200 Rh1BG208400 Rh1CG221900 Rh1CG222300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 121 |
| AciI | CCGC | 3 cut(s) | 108, 177, 180 |
| AclI | AACGTT | 1 cut(s) | 297 |
| AclWI | GGATC | 1 cut(s) | 4 |
| AcsI | RAATTY | 1 cut(s) | 150 |
| AfaI | GTAC | 2 cut(s) | 214, 273 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 204 |
| AgsI | TTSAA | 1 cut(s) | 255 |
| AluBI | AGCT | 1 cut(s) | 335 |
| AluI | AGCT | 1 cut(s) | 335 |
| AlwI | GGATC | 1 cut(s) | 4 |
| Aor13HI | TCCGGA | 1 cut(s) | 121 |
| ApoI | RAATTY | 1 cut(s) | 150 |
| AsuHPI | GGTGA | 2 cut(s) | 91, 194 |
| BccI | CCATC | 3 cut(s) | 104, 268, 296 |
| BceAI | ACGGC | 1 cut(s) | 231 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 265, 299 |
| BclI | TGATCA | 1 cut(s) | 312 |
| BfaI | CTAG | 1 cut(s) | 203 |
| BisI | GCNGC | 2 cut(s) | 108, 178 |
| BlpI | GCTNAGC | 2 cut(s) | 246, 336 |
| BlsI | GCNGC | 2 cut(s) | 109, 179 |
| BmiI | GGNNCC | 1 cut(s) | 307 |
| BmrI | ACTGGG | 2 cut(s) | 237, 315 |
| BmsI | GCATC | 1 cut(s) | 227 |
| BmuI | ACTGGG | 2 cut(s) | 237, 315 |
| BpmI | CTGGAG | 1 cut(s) | 58 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 246, 336 |
| BsaWI | WCCGGW | 1 cut(s) | 121 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 204 |
| Bse1I | ACTGG | 3 cut(s) | 41, 232, 321 |
| BseAI | TCCGGA | 1 cut(s) | 121 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 204 |
| BseMII | CTCAG | 2 cut(s) | 12, 237 |
| BseNI | ACTGG | 3 cut(s) | 41, 232, 321 |
| BseRI | GAGGAG | 1 cut(s) | 140 |
| BsiSI | CCGG | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 204 |
| Bsp13I | TCCGGA | 1 cut(s) | 121 |
| Bsp143I | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 246, 336 |
| BspACI | CCGC | 3 cut(s) | 108, 177, 180 |
| BspCNI | CTCAG | 2 cut(s) | 13, 238 |
| BspEI | TCCGGA | 1 cut(s) | 121 |
| BspLI | GGNNCC | 1 cut(s) | 307 |
| BspPI | GGATC | 1 cut(s) | 4 |
| BsrI | ACTGG | 3 cut(s) | 41, 232, 321 |
| BssMI | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| BstDEI | CTNAG | 3 cut(s) | 21, 246, 336 |
| BstKTI | GATC | 5 cut(s) | 12, 190, 285, 315, 345 |
| BstMBI | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 256, 346 |
| BtgZI | GCGATG | 1 cut(s) | 246 |
| BtsI | GCAGTG | 1 cut(s) | 54 |
| BtsIMutI | CAGTG | 1 cut(s) | 54 |
| Csp6I | GTAC | 2 cut(s) | 213, 272 |
| CviJI | RGCY | 7 cut(s) | 193, 245, 250, 259, 335, 340, 349 |
| CviKI_1 | RGCY | 7 cut(s) | 193, 245, 250, 259, 335, 340, 349 |
| CviQI | GTAC | 2 cut(s) | 213, 272 |
| DdeI | CTNAG | 3 cut(s) | 21, 246, 336 |
| DpnI | GATC | 5 cut(s) | 11, 189, 284, 314, 344 |
| DpnII | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| EcoRI | GAATTC | 1 cut(s) | 150 |
| FaiI | YATR | 1 cut(s) | 278 |
| FbaI | TGATCA | 1 cut(s) | 312 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 178 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 178 |
| FspBI | CTAG | 1 cut(s) | 203 |
| GluI | GCNGC | 2 cut(s) | 108, 178 |
| GsuI | CTGGAG | 1 cut(s) | 58 |
| HapII | CCGG | 1 cut(s) | 122 |
| HinfI | GANTC | 3 cut(s) | 23, 145, 163 |
| HpaII | CCGG | 1 cut(s) | 122 |
| HphI | GGTGA | 2 cut(s) | 91, 194 |
| Hpy188I | TCNGA | 4 cut(s) | 115, 223, 235, 328 |
| Hpy188III | TCNNGA | 5 cut(s) | 13, 86, 122, 286, 354 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 1 cut(s) | 261 |
| HpyCH4IV | ACGT | 1 cut(s) | 297 |
| HpyCH4V | TGCA | 1 cut(s) | 59 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 256, 346 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 246, 336 |
| HpySE526I | ACGT | 1 cut(s) | 297 |
| Kpn2I | TCCGGA | 1 cut(s) | 121 |
| Ksp22I | TGATCA | 1 cut(s) | 312 |
| Kzo9I | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| LpnPI | CCDG | 6 cut(s) | 22, 26, 135, 152, 213, 334 |
| LweI | GCATC | 1 cut(s) | 227 |
| MaeI | CTAG | 1 cut(s) | 203 |
| MaeII | ACGT | 1 cut(s) | 297 |
| MalI | GATC | 5 cut(s) | 11, 189, 284, 314, 344 |
| MboI | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| MluCI | AATT | 2 cut(s) | 31, 150 |
| MlyI | GAGTC | 2 cut(s) | 32, 154 |
| MmeI | TCCRAC | 1 cut(s) | 213 |
| MnlI | CCTC | 4 cut(s) | 33, 113, 118, 121 |
| MroI | TCCGGA | 1 cut(s) | 121 |
| MspI | CCGG | 1 cut(s) | 122 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 256, 346 |
| NdeII | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| NlaIV | GGNNCC | 1 cut(s) | 307 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 84, 111 |
| PfeI | GAWTC | 1 cut(s) | 163 |
| PkrI | GCNGC | 2 cut(s) | 109, 179 |
| PleI | GAGTC | 2 cut(s) | 31, 153 |
| PpsI | GAGTC | 2 cut(s) | 31, 153 |
| Psp1406I | AACGTT | 1 cut(s) | 297 |
| PspN4I | GGNNCC | 1 cut(s) | 307 |
| RsaI | GTAC | 2 cut(s) | 214, 273 |
| RsaNI | GTAC | 2 cut(s) | 213, 272 |
| SatI | GCNGC | 2 cut(s) | 108, 178 |
| Sau3AI | GATC | 5 cut(s) | 9, 187, 282, 312, 342 |
| SchI | GAGTC | 2 cut(s) | 32, 154 |
| SetI | ASST | 2 cut(s) | 300, 337 |
| SfaNI | GCATC | 1 cut(s) | 227 |
| Sse9I | AATT | 2 cut(s) | 31, 150 |
| SsiI | CCGC | 3 cut(s) | 108, 177, 180 |
| SspMI | CTAG | 1 cut(s) | 203 |
| TaiI | ACGT | 1 cut(s) | 300 |
| TaqI | TCGA | 4 cut(s) | 78, 87, 148, 161 |
| TasI | AATT | 2 cut(s) | 31, 150 |
| TauI | GCSGC | 2 cut(s) | 110, 180 |
| TfiI | GAWTC | 1 cut(s) | 163 |
| TscAI | CASTG | 1 cut(s) | 61 |
| TspDTI | ATGAA | 1 cut(s) | 345 |
| TspRI | CASTG | 1 cut(s) | 61 |
| XapI | RAATTY | 1 cut(s) | 150 |
| XspI | CTAG | 1 cut(s) | 203 |