Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0005930

Physical Location & Seq

Genomic Coordinates Forward (+)

12869909 .. 12888813

Gene Structure 18905 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG064600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGCTGTGCACTTCAGAATTTGAGACACGGCGTGCTTCATACTACTGGTTATTGCATTCTCTAGGCTTATATCAACCACATGTTTGGGAATATTCAAGACTGAATGTCAGTAACACTGTTATGTCGAAGTGTAAGTTAAATCAACTAGTGACTGAAAATTGGGTTGATGGTTGGGATGATCCACACCTTATGATACTAGCTGGTTTACAATGTAGGGGCGTGACATCAACTGCCATTAATACATTTGTTAAAGGAATTGGAATCACCAGAAGTGATTGTGGTATGATTCATCTGAGTTGCCTCGAGTACCACAGTAGAGAAGAGCTTAATAAAACAGCTCCTCGCACAATGGTTATGCTTGATCCTGTAAAGGTTGTCATTTCCAACTGGAAAGATGGCTTCATAAAGGACTGTGAAGCAAGAAAGTGGCCCGATTCTGAGGCAGAGTCCTACAAGGTTCCACTTTCCAAGGTGTTGTACATTGAGCACTCCGATTTTCGCCTTAAAGACCCAAAAGACTACTTCAGACTAGCTCCTAAAAAATCTGCCCTGCTTAGATACGCATTTCCTATCATTCTATCAAAGAATCCTGCTGAGCTTGATGATTGGCTTTCTGATCTGAATGGAAAATCAAAAGTGGTATACCATGTGACTATTCAACATGGATCTGTTATTGCCCAGCTTCTGGCTCTTCATAAATTTCAGCCAAAGAGACGAACTGCTTATATTGGACTACCGTTCAGAGAATCCAAATCTATCATATCCCGCATCAAAAACGCTCTAGTTATGTATAAGCAGCGTGTCCCCGTTGAGAACGATGATACCTATATAATGAGCACAACACGAGGTACGAACTATGATTTCGAAAGTGTTGAGGAGCAAGGGCGAGATGGTTCATCGAAAACTGTAGATGCACTTTCAACCAAGAAAAAATTGAAAATTGCACTTCTTTCCGTTTCATTGTGGAACAAGCTATTCCTAATCGCATGTGTGATTGCAGTCTCATTAGACCCCTTGTTCTTTTACATTCCAATCATCAATGAAGATGAAAAGTGTCTTGGAATAGACAAAGAGTTGAGGACCATAGCTCTCATTTTGCGATCCCTCAGTGATATCATTTTCATAGTGCATATTGTGTATCAAATTTGCGAAGCTACTATGGCGGCCTACAAAGTACACATAAAAGGAAAGTCGGAATTGGAATTGGATTGGTCATATTCGAAGATATCAATGGGTGAGATAATTCCATTTGCTAAATTAGTTGCTGGGAAGCTAGCATGGCGCTCCACGCTAACTGATATTTTGGCTGTTCTTCCCATACCACAATTTCTAGTGGTCTTTGGTTTCTTCAAAATGAGAGGCCATGGATATTTGGAACGCAAGAAGATTCTCAATGTCTTTCTCCTGGGTCAATATTTGCCAAGGATTTATCGAATTTACTTATCATCTAAGGAACTTAGACAAACTACAGGAATTTGGGTTAAGGCTCTGTTCAACTTTTTTCTGTATATACTAGCCAGTCACGTCATTGGAGCCTTTTGGTACTTCTTTTCTATTCAACGTGAGACATATTGCTGGCATCATGCTTGTATAAAGAATAGTACAAATGTCGAAGGATGTATGAGTACTTTCTACTGTGATGGTCGCAATACTACCGCTAGAAATGTCACTTTTATCAATCAGTTTTGCCACATCAATGTTGAAGACAATGCTACAGCGCTTTTTGATTTTGGAATATTTCTTAATTCTCTCAAGAATGGTAACACGGGCCATATACATTTTGCAACAAAGTTGTCCTACTCATTTTGGTGGGGATTGCGGAATCTGAGTCAGTTTCCTTTGCTAAAAGTATACGCTGAGAAGAAATACACCAATAGTTCTCAAAAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans

Protein Analysis

630

Amino Acids

72.59

Weight (kDa)

9.19

Isoelectric Point (pI)

35.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1c	PF00749	2 - 110	1.5e-23	tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_1c_C	PF03950	113 - 195	1.7e-13	tRNA synthetases class I (E and Q), anti-codon binding domain
Ion_trans	PF00520	321 - 610	8.3e-06	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005930)

Species	Orthologous Gene IDs
malus_domestica	MD16G1216100.v1.1
pyrus_communis	pycom14g06430 pycom16g18080
rosa_chinensis	RchiOBHm_Chr3g0487131 RchiOBHm_Chr4g0412641 RchiOBHm_Chr5g0058341 RchiOBHm_Chr5g0061621
rosa_laevigata	RLG00000001522
rosa_multiflora	Rmu_sc0002038.1_g000037
rosa_roxburghii	Rroxscaffold_1G00038640 Rroxscaffold_2G00139310 Rroxscaffold_4G00315150
rosa_rugosa	Rorug02G0030000 Rorug05G0189900 Rorug05G0394900 Rorug07G0289500
rosa_samantha	Rh1BG052800 Rh1BG158300 Rh1CG064600 Rh1DG068800 Rh3AG279600 Rh3BG374600 Rh3DG310900 Rh5AG401500 Rh5AG403700 Rh5BG415900 Rh5BG416000 Rh5CG273000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	685
AccI	GTMKAC	2 cut(s)	642, 1851
AciI	CCGC	4 cut(s)	766, 1163, 1656, 1819
AclWI	GGATC	4 cut(s)	173, 356, 673, 1095
AcsI	RAATTY	5 cut(s)	17, 698, 1143, 1434, 1473
AcuI	CTGAAG	1 cut(s)	508
AdeI	CACNNNGTG	1 cut(s)	32
AfaI	GTAC	7 cut(s)	308, 479, 850, 1176, 1544, 1603, 1627
AfeI	AGCGCT	1 cut(s)	1719
AfiI	CCNNNNNNNGG	1 cut(s)	685
AflIII	ACRYGT	1 cut(s)	79
AgsI	TTSAA	8 cut(s)	96, 659, 921, 937, 1351, 1495, 1559, 1703
AhdI	GACNNNNNGTC	1 cut(s)	104
AhlI	ACTAGT	1 cut(s)	145
AjiI	CACGTC	1 cut(s)	1525
AjnI	CCWGG	1 cut(s)	1404
AjuI	GAANNNNNNNTTGG	2 cut(s)	1041, 1073
Alw21I	GWGCWC	3 cut(s)	11, 489, 839
Alw26I	GTCTC	4 cut(s)	17, 706, 1006, 1559
Alw44I	GTGCAC	1 cut(s)	7
AlwI	GGATC	4 cut(s)	173, 356, 673, 1095
AlwNI	CAGNNNCTG	1 cut(s)	685
Ama87I	CYCGRG	1 cut(s)	302
Aor51HI	AGCGCT	1 cut(s)	1719
AoxI	GGCC	4 cut(s)	428, 1164, 1360, 1768
ApaLI	GTGCAC	1 cut(s)	7
ApeKI	GCWGC	1 cut(s)	796
ApoI	RAATTY	5 cut(s)	17, 698, 1143, 1434, 1473
AseI	ATTAAT	1 cut(s)	237
AspLEI	GCGC	2 cut(s)	1284, 1720
AspS9I	GGNCC	3 cut(s)	429, 1080, 1768
AsuHPI	GGTGA	2 cut(s)	256, 1247
AsuII	TTCGAA	2 cut(s)	864, 1220
AsuNHI	GCTAGC	1 cut(s)	1273
AvaI	CYCGRG	1 cut(s)	302
AvaII	GGWCC	1 cut(s)	1080
BaeGI	GKGCMC	1 cut(s)	11
BauI	CACGAG	1 cut(s)	843
BbsI	GAAGAC	1 cut(s)	1710
Bbv12I	GWGCWC	3 cut(s)	11, 489, 839
BbvI	GCAGC	1 cut(s)	808
BccI	CCATC	4 cut(s)	161, 389, 884, 1634
BceAI	ACGGC	1 cut(s)	44
BciT130I	CCWGG	1 cut(s)	1406
BcoDI	GTCTC	4 cut(s)	17, 706, 1006, 1559
BcuI	ACTAGT	1 cut(s)	145
BfaI	CTAG	9 cut(s)	62, 146, 197, 530, 782, 1274, 1331, 1514, 1659
BfmI	CTRYAG	3 cut(s)	906, 1467, 1713
BfoI	RGCGCY	2 cut(s)	1285, 1721
BisI	GCNGC	2 cut(s)	797, 1164
BlpI	GCTNAGC	1 cut(s)	594
BlsI	GCNGC	2 cut(s)	798, 1165
BmcAI	AGTACT	1 cut(s)	1627
Bme1390I	CCNGG	1 cut(s)	1406
Bme18I	GGWCC	1 cut(s)	1080
BmeRI	GACNNNNNGTC	1 cut(s)	104
BmeT110I	CYCGRG	1 cut(s)	302
BmgBI	CACGTC	1 cut(s)	1525
BmgT120I	GGNCC	3 cut(s)	429, 1080, 1768
BmiI	GGNNCC	2 cut(s)	459, 1534
BmrFI	CCNGG	1 cut(s)	1406
BmsI	GCATC	3 cut(s)	777, 901, 1588
BmtI	GCTAGC	1 cut(s)	1277
BpiI	GAAGAC	1 cut(s)	1710
Bpu1102I	GCTNAGC	1 cut(s)	594
Bpu14I	TTCGAA	2 cut(s)	864, 1220
BpuEI	CTTGAG	1 cut(s)	1736
BsaJI	CCNNGG	4 cut(s)	468, 1363, 1405, 1421
Bsc4I	CCNNNNNNNGG	1 cut(s)	685
Bse1I	ACTGG	3 cut(s)	50, 392, 1518
BseBI	CCWGG	1 cut(s)	1406
BseDI	CCNNGG	4 cut(s)	468, 1363, 1405, 1421
BseGI	GGATG	2 cut(s)	181, 1622
BseLI	CCNNNNNNNGG	1 cut(s)	685
BseMII	CTCAG	6 cut(s)	284, 429, 585, 1120, 1817, 1848
BseNI	ACTGG	3 cut(s)	50, 392, 1518
BseRI	GAGGAG	2 cut(s)	330, 890
BseSI	GKGCMC	1 cut(s)	11
BseXI	GCAGC	1 cut(s)	808
BseYI	CCCAGC	2 cut(s)	678, 1265
BshFI	GGCC	4 cut(s)	430, 1166, 1362, 1770
BsiHKAI	GWGCWC	3 cut(s)	11, 489, 839
BsiHKCI	CYCGRG	1 cut(s)	302
BslFI	GGGAC	1 cut(s)	788
BslI	CCNNNNNNNGG	1 cut(s)	685
BsmAI	GTCTC	4 cut(s)	17, 706, 1006, 1559
BsmBI	CGTCTC	1 cut(s)	706
BsmFI	GGGAC	1 cut(s)	788
BsmI	GAATGC	1 cut(s)	55
BsnI	GGCC	4 cut(s)	430, 1166, 1362, 1770
BsoBI	CYCGRG	1 cut(s)	302
Bsp119I	TTCGAA	2 cut(s)	864, 1220
Bsp1286I	GDGCHC	3 cut(s)	11, 489, 839
Bsp1407I	TGTACA	1 cut(s)	477
Bsp143I	GATC	5 cut(s)	178, 361, 616, 665, 1100
Bsp1720I	GCTNAGC	1 cut(s)	594
Bsp19I	CCATGG	1 cut(s)	1363
BspACI	CCGC	4 cut(s)	766, 1163, 1656, 1819
BspANI	GGCC	4 cut(s)	430, 1166, 1362, 1770
BspCNI	CTCAG	6 cut(s)	285, 430, 586, 1119, 1818, 1849
BspLI	GGNNCC	2 cut(s)	459, 1534
BspOI	GCTAGC	1 cut(s)	1277
BspPI	GGATC	4 cut(s)	173, 356, 673, 1095
BspQI	GCTCTTC	2 cut(s)	315, 696
BspT104I	TTCGAA	2 cut(s)	864, 1220
BsrGI	TGTACA	1 cut(s)	477
BsrI	ACTGG	3 cut(s)	50, 392, 1518
BssECI	CCNNGG	4 cut(s)	468, 1363, 1405, 1421
BssMI	GATC	5 cut(s)	178, 361, 616, 665, 1100
BssNAI	GTATAC	2 cut(s)	643, 1852
BssSI	CACGAG	1 cut(s)	843
BssT1I	CCWWGG	3 cut(s)	468, 1363, 1421
Bst1107I	GTATAC	2 cut(s)	643, 1852
Bst2BI	CACGAG	1 cut(s)	843
Bst2UI	CCWGG	1 cut(s)	1406
Bst4CI	ACNGT	6 cut(s)	118, 314, 413, 738, 907, 1637
Bst6I	CTCTTC	2 cut(s)	315, 696
BstAUI	TGTACA	1 cut(s)	477
BstBI	TTCGAA	2 cut(s)	864, 1220
BstC8I	GCNNGC	3 cut(s)	33, 1275, 1577
BstDEI	CTNAG	9 cut(s)	293, 438, 554, 594, 1106, 1449, 1457, 1826, 1857
BstDSI	CCRYGG	1 cut(s)	1363
BstF5I	GGATG	2 cut(s)	181, 1622
BstH2I	RGCGCY	2 cut(s)	1285, 1721
BstHHI	GCGC	2 cut(s)	1284, 1720
BstKTI	GATC	5 cut(s)	181, 364, 619, 668, 1103
BstMAI	GTCTC	4 cut(s)	17, 706, 1006, 1559
BstMBI	GATC	5 cut(s)	178, 361, 616, 665, 1100
BstMWI	GCNNNNNNNGC	3 cut(s)	1160, 1279, 1288
BstNI	CCWGG	1 cut(s)	1406
BstNSI	RCATGY	2 cut(s)	83, 990
BstSCI	CCNGG	1 cut(s)	1404
BstSFI	CTRYAG	3 cut(s)	906, 1467, 1713
BstSLI	GKGCMC	1 cut(s)	11
BstV1I	GCAGC	1 cut(s)	808
BstV2I	GAAGAC	1 cut(s)	1710
BstX2I	RGATCY	1 cut(s)	665
BstXI	CCANNNNNNTGG	1 cut(s)	84
BstYI	RGATCY	1 cut(s)	665
BstZ17I	GTATAC	2 cut(s)	643, 1852
BsuRI	GGCC	4 cut(s)	430, 1166, 1362, 1770
BtgI	CCRYGG	1 cut(s)	1363
BtrI	CACGTC	1 cut(s)	1525
BtsCI	GGATG	2 cut(s)	181, 1622
BtsIMutI	CAGTG	2 cut(s)	114, 1114
Cac8I	GCNNGC	3 cut(s)	33, 1275, 1577
CaiI	CAGNNNCTG	1 cut(s)	685
CfoI	GCGC	2 cut(s)	1284, 1720
Cfr13I	GGNCC	3 cut(s)	429, 1080, 1768
Csp6I	GTAC	7 cut(s)	307, 478, 849, 1175, 1543, 1602, 1626
CviAII	CATG	7 cut(s)	80, 647, 662, 987, 1278, 1364, 1583
CviQI	GTAC	7 cut(s)	307, 478, 849, 1175, 1543, 1602, 1626
DdeI	CTNAG	9 cut(s)	293, 438, 554, 594, 1106, 1449, 1457, 1826, 1857
DpnI	GATC	5 cut(s)	180, 363, 618, 667, 1102
DpnII	GATC	5 cut(s)	178, 361, 616, 665, 1100
DraIII	CACNNNGTG	1 cut(s)	32
DriI	GACNNNNNGTC	1 cut(s)	104
Eam1104I	CTCTTC	2 cut(s)	315, 696
Eam1105I	GACNNNNNGTC	1 cut(s)	104
EarI	CTCTTC	2 cut(s)	315, 696
Eco130I	CCWWGG	3 cut(s)	468, 1363, 1421
Eco32I	GATATC	2 cut(s)	1114, 1227
Eco47I	GGWCC	1 cut(s)	1080
Eco47III	AGCGCT	1 cut(s)	1719
Eco57I	CTGAAG	1 cut(s)	508
Eco88I	CYCGRG	1 cut(s)	302
EcoRII	CCWGG	1 cut(s)	1404
EcoRV	GATATC	2 cut(s)	1114, 1227
EcoT14I	CCWWGG	3 cut(s)	468, 1363, 1421
ErhI	CCWWGG	3 cut(s)	468, 1363, 1421
Esp3I	CGTCTC	1 cut(s)	706
FaeI	CATG	7 cut(s)	83, 650, 665, 990, 1281, 1367, 1586
FaqI	GGGAC	1 cut(s)	788
FatI	CATG	7 cut(s)	79, 646, 661, 986, 1277, 1363, 1582
FauI	CCCGC	1 cut(s)	773
FblI	GTMKAC	2 cut(s)	642, 1851
Fnu4HI	GCNGC	2 cut(s)	797, 1164
FokI	GGATG	2 cut(s)	188, 1629
Fsp4HI	GCNGC	2 cut(s)	797, 1164
FspBI	CTAG	9 cut(s)	62, 146, 197, 530, 782, 1274, 1331, 1514, 1659
GlaI	GCGC	2 cut(s)	1283, 1719
GluI	GCNGC	2 cut(s)	797, 1164
GsaI	CCCAGC	2 cut(s)	682, 1269
HaeII	RGCGCY	2 cut(s)	1285, 1721
HaeIII	GGCC	4 cut(s)	430, 1166, 1362, 1770
HhaI	GCGC	2 cut(s)	1284, 1720
Hin1II	CATG	7 cut(s)	83, 650, 665, 990, 1281, 1367, 1586
Hin6I	GCGC	2 cut(s)	1282, 1718
HinP1I	GCGC	2 cut(s)	1282, 1718
HinfI	GANTC	9 cut(s)	261, 286, 434, 446, 586, 746, 1387, 1822, 1828
HphI	GGTGA	2 cut(s)	256, 1247
Hpy166II	GTNNAC	5 cut(s)	9, 206, 643, 1177, 1852
Hpy188III	TCNNGA	2 cut(s)	96, 1753
Hpy8I	GTNNAC	5 cut(s)	9, 206, 643, 1177, 1852
HpyAV	CCTTC	1 cut(s)	1607
HpyCH4III	ACNGT	6 cut(s)	118, 314, 413, 738, 907, 1637
HpyCH4IV	ACGT	2 cut(s)	1524, 1561
HpyCH4V	TGCA	7 cut(s)	9, 55, 914, 944, 998, 1129, 1784
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1160, 1279, 1288
HpyF3I	CTNAG	9 cut(s)	293, 438, 554, 594, 1106, 1449, 1457, 1826, 1857
HpySE526I	ACGT	2 cut(s)	1524, 1561
Hsp92II	CATG	7 cut(s)	83, 650, 665, 990, 1281, 1367, 1586
HspAI	GCGC	2 cut(s)	1282, 1718
Kzo9I	GATC	5 cut(s)	178, 361, 616, 665, 1100
LguI	GCTCTTC	2 cut(s)	315, 696
LmnI	GCTCC	5 cut(s)	343, 538, 877, 1289, 1532
Lsp1109I	GCAGC	1 cut(s)	808
LweI	GCATC	3 cut(s)	777, 901, 1588
MaeI	CTAG	9 cut(s)	62, 146, 197, 530, 782, 1274, 1331, 1514, 1659
MaeII	ACGT	2 cut(s)	1524, 1561
MaeIII	GTNAC	7 cut(s)	110, 148, 220, 649, 1520, 1666, 1760
MalI	GATC	5 cut(s)	180, 363, 618, 667, 1102
MboI	GATC	5 cut(s)	178, 361, 616, 665, 1100
MboII	GAAGA	9 cut(s)	332, 683, 1055, 1234, 1304, 1339, 1396, 1715, 1873
MflI	RGATCY	1 cut(s)	665
MhlI	GDGCHC	3 cut(s)	11, 489, 839
MlyI	GAGTC	2 cut(s)	455, 1837
MmeI	TCCRAC	2 cut(s)	408, 1173
MnlI	CCTC	8 cut(s)	311, 351, 433, 839, 868, 1071, 1115, 1352
MseI	TTAA	7 cut(s)	137, 237, 249, 327, 504, 1482, 1743
MslI	CAYNNNNRTG	3 cut(s)	119, 1695, 1807
MspR9I	CCNGG	1 cut(s)	1406
Mva1269I	GAATGC	1 cut(s)	55
MvaI	CCWGG	1 cut(s)	1406
MwoI	GCNNNNNNNGC	3 cut(s)	1160, 1279, 1288
NcoI	CCATGG	1 cut(s)	1363
NdeII	GATC	5 cut(s)	178, 361, 616, 665, 1100
NheI	GCTAGC	1 cut(s)	1273
NlaIII	CATG	7 cut(s)	83, 650, 665, 990, 1281, 1367, 1586
NlaIV	GGNNCC	2 cut(s)	459, 1534
NmuCI	GTSAC	5 cut(s)	148, 220, 649, 1520, 1666
NspI	RCATGY	2 cut(s)	83, 990
NspV	TTCGAA	2 cut(s)	864, 1220
PaeR7I	CTCGAG	1 cut(s)	302
PciI	ACATGT	1 cut(s)	79
PciSI	GCTCTTC	2 cut(s)	315, 696
PctI	GAATGC	1 cut(s)	55
PfeI	GAWTC	7 cut(s)	261, 286, 434, 586, 746, 1387, 1822
PflMI	CCANNNNNTGG	1 cut(s)	685
PkrI	GCNGC	2 cut(s)	798, 1165
PleI	GAGTC	2 cut(s)	454, 1836
PpsI	GAGTC	2 cut(s)	454, 1836
PscI	ACATGT	1 cut(s)	79
PshBI	ATTAAT	1 cut(s)	237
Psp6I	CCWGG	1 cut(s)	1404
PspFI	CCCAGC	2 cut(s)	678, 1265
PspGI	CCWGG	1 cut(s)	1404
PspN4I	GGNNCC	2 cut(s)	459, 1534
PspPI	GGNCC	3 cut(s)	429, 1080, 1768
PspXI	VCTCGAGB	1 cut(s)	302
PstNI	CAGNNNCTG	1 cut(s)	685
PsuI	RGATCY	1 cut(s)	665
RsaI	GTAC	7 cut(s)	308, 479, 850, 1176, 1544, 1603, 1627
RsaNI	GTAC	7 cut(s)	307, 478, 849, 1175, 1543, 1602, 1626
RseI	CAYNNNNRTG	3 cut(s)	119, 1695, 1807
SapI	GCTCTTC	2 cut(s)	315, 696
SaqAI	TTAA	7 cut(s)	137, 237, 249, 327, 504, 1482, 1743
SatI	GCNGC	2 cut(s)	797, 1164
Sau3AI	GATC	5 cut(s)	178, 361, 616, 665, 1100
Sau96I	GGNCC	3 cut(s)	429, 1080, 1768
ScaI	AGTACT	1 cut(s)	1627
SchI	GAGTC	2 cut(s)	455, 1837
ScrFI	CCNGG	1 cut(s)	1406
SduI	GDGCHC	3 cut(s)	11, 489, 839
SfaNI	GCATC	3 cut(s)	777, 901, 1588
SfcI	CTRYAG	3 cut(s)	906, 1467, 1713
Sfr274I	CTCGAG	1 cut(s)	302
SfuI	TTCGAA	2 cut(s)	864, 1220
SinI	GGWCC	1 cut(s)	1080
SlaI	CTCGAG	1 cut(s)	302
SmiMI	CAYNNNNRTG	3 cut(s)	119, 1695, 1807
SmlI	CTYRAG	2 cut(s)	302, 1751
SmoI	CTYRAG	2 cut(s)	302, 1751
SpeI	ACTAGT	1 cut(s)	145
SsiI	CCGC	4 cut(s)	766, 1163, 1656, 1819
SspI	AATATT	3 cut(s)	92, 1415, 1737
SspMI	CTAG	9 cut(s)	62, 146, 197, 530, 782, 1274, 1331, 1514, 1659
StyD4I	CCNGG	1 cut(s)	1404
StyI	CCWWGG	3 cut(s)	468, 1363, 1421
TaaI	ACNGT	6 cut(s)	118, 314, 413, 738, 907, 1637
TaiI	ACGT	2 cut(s)	1527, 1564
TaqI	TCGA	7 cut(s)	125, 303, 864, 899, 1220, 1432, 1611
TatI	WGTACW	4 cut(s)	477, 1174, 1601, 1625
TauI	GCSGC	1 cut(s)	1166
TfiI	GAWTC	7 cut(s)	261, 286, 434, 586, 746, 1387, 1822
Tru1I	TTAA	7 cut(s)	137, 237, 249, 327, 504, 1482, 1743
Tru9I	TTAA	7 cut(s)	137, 237, 249, 327, 504, 1482, 1743
TscAI	CASTG	2 cut(s)	121, 1114
TseFI	GTSAC	5 cut(s)	148, 220, 649, 1520, 1666
TseI	GCWGC	1 cut(s)	796
Tsp45I	GTSAC	5 cut(s)	148, 220, 649, 1520, 1666
TspDTI	ATGAA	9 cut(s)	27, 278, 391, 683, 885, 948, 1056, 1062, 1111
TspGWI	ACGGA	1 cut(s)	943
TspRI	CASTG	2 cut(s)	121, 1114
Van91I	CCANNNNNTGG	1 cut(s)	685
VneI	GTGCAC	1 cut(s)	7
VpaK11BI	GGWCC	1 cut(s)	1080
VspI	ATTAAT	1 cut(s)	237
XapI	RAATTY	5 cut(s)	17, 698, 1143, 1434, 1473
XceI	RCATGY	2 cut(s)	83, 990
XhoI	CTCGAG	1 cut(s)	302
XmiI	GTMKAC	2 cut(s)	642, 1851
XspI	CTAG	9 cut(s)	62, 146, 197, 530, 782, 1274, 1331, 1514, 1659
ZrmI	AGTACT	1 cut(s)	1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.