Rorug05G0189900

ABC transporter A family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
18428075 .. 18432660
4586 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0189900.1

Sequence Viewer

Length: 1995 bp
ATGAAGCTTGGTTGGAACTTAGTTACCGGTTTAGAGAGTTATGTCTCGTCTTGGAAGAGCACAGAAGATCCAGCTCCAGGAGAGTTTTCAGTACGGATGGATCTTCATGGTTTCCCACAAATTTTTCTTATGAAGGGAGCTAAGATACAGAGTAGAGGAGGGTCATGGAACGGCTTTCATGTAACAGGATATGGATATCCTAGTCCTCTAGAACCAAACTCACCATCTGGGTTTCAATTTGTGTTGAATAAGGATGAGGTCTATTCTGAATACAAACTCATAAACAGATCATTGTTCTCGAGATATGTGTTGAGTCCCTTAGGTATTGCCCAGCGATTTGCATGGGTCGACCAAACACATATTTGGGAACTTTCCTCTACAGTTCTAGCAGATCAGTGTGATAATTATGCCTTGTGTGGCGCATATACGAGGTGCAATATCAATACCTCTCCCATCTGTGCATGCTTGCAGGGATTTGTACCAAAATCTCCAAGAGATTGGAATTCAGGAAATTGGTCTAATGGGTGTGTTCGCAAGACTCCTTTAACTTGCAGTGAAGATGGCTTCTTAAATTTCACTAGGTTGAAGTTGCCAGACACATCTTCTTCTTGGTTTGATACAAGCATGAGCCTTGAGGAGTGCAAGGTTTTATGTTTGGAAAACTGCTCGTGTACGGCATATGCAAATACAGATATCAGGGATGGAGGAAGTGGCTGCTTGCTTTGGTTTGAGAACCTCATTGACATAAAAGAATTCACTCCTGGTGGTGGTCAAGACCTCTATATACGGATGGCTGCTTCAGAACTAGGTCATACTGAGGAAATGAACAAGTTGAACAAGAAAAAGCTAGCTTTTATTATTCTCAGCTGCACAGTTTTCCTCATGGGACTATTAATCATTGGATTGCTCTTGTATAGACAGAGGAAGAAACTCAGCGATCAAGAAGTCTGGAGAAACTACAAGAAAGGTTACCTTGGGGAAGATGGGGAAGACATGGAGTTGCCAACATTTGACTTGACAACAATCAGTAACGCCACCAATGACTTTTCAAGCAGCAACAAGCTGGGAGAAGGTGGTTTTGGACCAGTGTTCAAGGGCACATTAATAGGAGGAAAGGAAATTGCAGTAAAGAGGTTGTCTAAGAATTCTGGACAGGGAGTAAGAGAGTTCAAAAACGAAGTTATACTAATAGCTGGACTTCAGCACCGCAATCTTGTAAAGCTTCTGGGTTGTTGCACTGAGGACAATGAGAAAATGTTAATATACGAATTCTTGCCCAATAGAAGCTTGGACTTCTTTATTTTTGACCAAGAAAGAAAGAAGTTGCTCGACTGGCCCAAGTGCTTCAACATTATTGATGGAATTGCTCGAGGGCTCCTATATCTTCACCAAGACTCTAGATTAAGGATTATCCATAGAGATATGAAAGCTAGCAATATTTTGCTCGATAGTAATATGAACCCAAAGATTTCAGACTTTGGCCTGGCAAAAACATTTGGCGGTGATGAAAGCCGATCCAAAACAAACATAGTGGCTGGAACATATGGTTATATGGCTCCTGAATATGCAGTAGATGGAATTTTCTCTATGAAATCTGATGTATTTAGCTTTGGAGTTGTACTATTAGAGATATTGAGTAGGGAAAGGAACAGGGGATTCTGTCATGCAGATCACCATCATAACCTTCTTGGACATGCATGGACACTGTGGATGCAAGATAAACAACTGGAATTAATTGATAAGACGTTACGTGATTCATGCACCATATCGGAAGTATTAAGGTGTCTTCATGTGGGACTTTTATGTGTGCAACGAAGACCTGAAGAGAGACCAAACATGTCAAAAGTTGTTGTCATGTTGAGCAATGAGGTAATTTTGCCTCCACCAAAGCAGCCTGGTTTTTACTCAGAACGGAGTCTACCTGAATCACCATCGATGATGCATTACCCATCTTCAGAAAATAATTTCACCATTACATTGTTGGAGTCAAGGTAG

Protein Analysis

664

Amino Acids

75.0

Weight (kDa)

6.56

Isoelectric Point (pI)

54.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 52 - 163 4.3e-22 S-locus glycoprotein domain
PAN_2 PF08276 184 - 249 3.7e-22 PAN-like domain
Pkinase PF00069 350 - 616 6.2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 352 - 618 2.2e-46 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 621 - 664 6.5e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000620)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03910 FvH4_4g13750 FvH4_6g21492 FvH4_6g21740 FvH4_6g24450
malus_domestica MD05G1336000.v1.1 MD05G1336100.v1.1 MD10G1212400.v1.1 MD10G1311600.v1.1
prunus_persica Prupe.4G112200_v2.0.a1 Prupe.4G130000_v2.0.a1 Prupe.4G130300_v2.0.a1 Prupe.4G219800_v2.0.a1 Prupe.4G219900_v2.0.a1 Prupe.4G220100_v2.0.a1
pyrus_communis pycom05g30760 pycom10g26280
rosa_chinensis RchiOBHm_Chr3g0478691 RchiOBHm_Chr3g0479021 RchiOBHm_Chr5g0004511 RchiOBHm_Chr5g0019881 RchiOBHm_Chr5g0021181
rosa_laevigata RLG00000023610 RLG00000023612 RLG00000031235 RLG00000032481 RLG00000032506 RLG00000032589 RLG00000032592
rosa_multiflora Rmu_co8446543.1_g000001 Rmu_sc0001396.1_g000010 Rmu_sc0002454.1_g000005 Rmu_sc0002531.1_g000072 Rmu_sc0002715.1_g000028 Rmu_sc0005207.1_g000008 Rmu_sc0005645.1_g000010 Rmu_sc0008074.1_g000017 Rmu_sc0012286.1_g000001 Rmu_ssc0000244.1_g000041
rosa_roxburghii Rroxscaffold_1G00039650 Rroxscaffold_1G00058030 Rroxscaffold_1G00058290 Rroxscaffold_1G00071010 Rroxscaffold_6G00402820 Rroxscaffold_6G00403180
rosa_rugosa Rorug03G0167000 Rorug03G0167100 Rorug03G0170200 Rorug03G0304300 Rorug05G0054800 Rorug05G0065000 Rorug05G0189900
rosa_samantha Rh3AG219300 Rh3AG221100 Rh3BG251000 Rh3BG253400 Rh3BG253800 Rh3CG247800 Rh3CG250000 Rh3DG244100 Rh3DG245900 Rh4AG008500 Rh4CG009200 Rh4CG009600 Rh5AG275400 Rh5BG144100 Rh5BG144400 Rh5BG144500 Rh5BG147400 Rh5BG280200 Rh5CG043100 Rh5CG155800 Rh5CG312400 Rh5DG143800 Rh5DG146700 Rh5DG288400
rosa_wichuraiana Rw3G019900 Rw5G012800 Rw5G013070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 348, 1918
AciI CCGC 2 cut(s) 1207, 1500
AclWI GGATC 3 cut(s) 62, 108, 1509
AcsI RAATTY 7 cut(s) 120, 502, 571, 752, 1144, 1268, 1578
AcuI CTGAAG 4 cut(s) 783, 1184, 1842, 1938
AfaI GTAC 4 cut(s) 93, 480, 673, 1620
AfiI CCNNNNNNNGG 2 cut(s) 77, 767
AflIII ACRYGT 1 cut(s) 1836
AgeI ACCGGT 1 cut(s) 26
AgsI TTSAA 8 cut(s) 236, 247, 586, 835, 1050, 1093, 1171, 1348
AjnI CCWGG 4 cut(s) 76, 760, 1482, 1894
AjuI GAANNNNNNNTTGG 2 cut(s) 1062, 1094
Alw21I GWGCWC 1 cut(s) 62
Alw26I GTCTC 2 cut(s) 49, 1822
AlwI GGATC 3 cut(s) 62, 108, 1509
Ama87I CYCGRG 2 cut(s) 298, 1368
AoxI GGCC 2 cut(s) 1334, 1480
ApeKI GCWGC 5 cut(s) 714, 794, 867, 1053, 1891
ApoI RAATTY 7 cut(s) 120, 502, 571, 752, 1144, 1268, 1578
AseI ATTAAT 3 cut(s) 893, 1103, 1733
AsiGI ACCGGT 1 cut(s) 26
AspLEI GCGC 1 cut(s) 422
AspS9I GGNCC 2 cut(s) 1082, 1335
AsuHPI GGTGA 6 cut(s) 213, 1379, 1514, 1664, 1920, 1960
AsuNHI GCTAGC 2 cut(s) 847, 1430
AvaI CYCGRG 2 cut(s) 298, 1368
AvaII GGWCC 1 cut(s) 1082
AxyI CCTNAGG 1 cut(s) 319
BaeGI GKGCMC 1 cut(s) 1100
BanII GRGCYC 1 cut(s) 1377
BauI CACGAG 1 cut(s) 667
BbsI GAAGAC 3 cut(s) 996, 1778, 1822
Bbv12I GWGCWC 1 cut(s) 62
BbvI GCAGC 5 cut(s) 701, 781, 854, 1065, 1903
BceAI ACGGC 2 cut(s) 187, 690
BciT130I CCWGG 4 cut(s) 78, 762, 1484, 1896
BcoDI GTCTC 2 cut(s) 49, 1822
BfaI CTAG 8 cut(s) 201, 209, 386, 579, 806, 848, 1398, 1431
BfmI CTRYAG 1 cut(s) 378
BisI GCNGC 5 cut(s) 715, 795, 868, 1054, 1892
BlsI GCNGC 5 cut(s) 716, 796, 869, 1055, 1893
Bme1390I CCNGG 4 cut(s) 78, 762, 1484, 1896
Bme18I GGWCC 1 cut(s) 1082
BmeT110I CYCGRG 2 cut(s) 298, 1368
BmgT120I GGNCC 2 cut(s) 1082, 1335
BmiI GGNNCC 2 cut(s) 1376, 1557
BmrFI CCNGG 4 cut(s) 78, 762, 1484, 1896
BmsI GCATC 2 cut(s) 1701, 1929
BmtI GCTAGC 2 cut(s) 851, 1434
BpiI GAAGAC 3 cut(s) 996, 1778, 1822
BpmI CTGGAG 2 cut(s) 60, 970
BpuEI CTTGAG 1 cut(s) 653
Bsa29I ATCGAT 1 cut(s) 1934
BsaAI YACGTR 1 cut(s) 1751
BsaBI GATNNNNATC 1 cut(s) 1674
BsaI GGTCTC 1 cut(s) 1822
BsaJI CCNNGG 1 cut(s) 973
BsaWI WCCGGW 1 cut(s) 26
BsaXI ACNNNNNCTCC 1 cut(s) 1976
Bsc4I CCNNNNNNNGG 2 cut(s) 77, 767
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 3 cut(s) 1085, 1337, 1731
Bse21I CCTNAGG 1 cut(s) 319
Bse3DI GCAATG 1 cut(s) 1870
Bse8I GATNNNNATC 1 cut(s) 1674
BseBI CCWGG 4 cut(s) 78, 762, 1484, 1896
BseCI ATCGAT 1 cut(s) 1934
BseDI CCNNGG 1 cut(s) 973
BseGI GGATG 5 cut(s) 102, 259, 706, 795, 1716
BseJI GATNNNNATC 1 cut(s) 1674
BseLI CCNNNNNNNGG 2 cut(s) 77, 767
BseMI GCAATG 1 cut(s) 1870
BseMII CTCAG 5 cut(s) 807, 877, 946, 1230, 1920
BseNI ACTGG 3 cut(s) 1085, 1337, 1731
BseRI GAGGAG 2 cut(s) 171, 650
BseSI GKGCMC 1 cut(s) 1100
BseXI GCAGC 5 cut(s) 701, 781, 854, 1065, 1903
BseYI CCCAGC 2 cut(s) 330, 1063
BsgI GTGCAG 1 cut(s) 853
BshFI GGCC 2 cut(s) 1336, 1482
BshTI ACCGGT 1 cut(s) 26
BshVI ATCGAT 1 cut(s) 1934
BsiHKAI GWGCWC 1 cut(s) 62
BsiHKCI CYCGRG 2 cut(s) 298, 1368
BsiSI CCGG 1 cut(s) 27
BslFI GGGAC 3 cut(s) 300, 900, 1809
BslI CCNNNNNNNGG 2 cut(s) 77, 767
BsmAI GTCTC 2 cut(s) 49, 1822
BsmFI GGGAC 3 cut(s) 300, 900, 1809
BsnI GGCC 2 cut(s) 1336, 1482
Bso31I GGTCTC 1 cut(s) 1822
BsoBI CYCGRG 2 cut(s) 298, 1368
Bsp1286I GDGCHC 3 cut(s) 62, 1100, 1377
Bsp143I GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
BspACI CCGC 2 cut(s) 1207, 1500
BspANI GGCC 2 cut(s) 1336, 1482
BspCNI CTCAG 5 cut(s) 808, 876, 945, 1231, 1919
BspDI ATCGAT 1 cut(s) 1934
BspLI GGNNCC 2 cut(s) 1376, 1557
BspOI GCTAGC 2 cut(s) 851, 1434
BspPI GGATC 3 cut(s) 62, 108, 1509
BspQI GCTCTTC 1 cut(s) 50
BspTNI GGTCTC 1 cut(s) 1822
BsrDI GCAATG 1 cut(s) 1870
BsrFI RCCGGY 1 cut(s) 26
BsrI ACTGG 3 cut(s) 1085, 1337, 1731
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 1 cut(s) 973
BssMI GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
BssSI CACGAG 1 cut(s) 667
BssT1I CCWWGG 1 cut(s) 973
Bst2BI CACGAG 1 cut(s) 667
Bst2UI CCWGG 4 cut(s) 78, 762, 1484, 1896
Bst4CI ACNGT 3 cut(s) 382, 874, 1707
Bst6I CTCTTC 2 cut(s) 50, 1818
BstBAI YACGTR 1 cut(s) 1751
BstC8I GCNNGC 5 cut(s) 463, 467, 719, 849, 1432
BstDEI CTNAG 9 cut(s) 19, 141, 319, 816, 863, 932, 1140, 1239, 1906
BstEII GGTNACC 1 cut(s) 968
BstF5I GGATG 5 cut(s) 102, 259, 706, 795, 1716
BstHHI GCGC 1 cut(s) 422
BstKTI GATC 7 cut(s) 70, 103, 290, 394, 940, 1517, 1672
BstMAI GTCTC 2 cut(s) 49, 1822
BstMBI GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
BstMWI GCNNNNNNNGC 1 cut(s) 1333
BstNI CCWGG 4 cut(s) 78, 762, 1484, 1896
BstNSI RCATGY 3 cut(s) 465, 1697, 1840
BstPI GGTNACC 1 cut(s) 968
BstSCI CCNGG 4 cut(s) 76, 760, 1482, 1894
BstSFI CTRYAG 1 cut(s) 378
BstSLI GKGCMC 1 cut(s) 1100
BstV1I GCAGC 5 cut(s) 701, 781, 854, 1065, 1903
BstV2I GAAGAC 3 cut(s) 996, 1778, 1822
BstX2I RGATCY 2 cut(s) 67, 100
BstXI CCANNNNNNTGG 1 cut(s) 498
BstYI RGATCY 2 cut(s) 67, 100
Bsu15I ATCGAT 1 cut(s) 1934
Bsu36I CCTNAGG 1 cut(s) 319
BsuRI GGCC 2 cut(s) 1336, 1482
BsuTUI ATCGAT 1 cut(s) 1934
BtsCI GGATG 5 cut(s) 102, 259, 706, 795, 1716
BtsI GCAGTG 1 cut(s) 559
BtsIMutI CAGTG 5 cut(s) 401, 559, 1092, 1236, 1703
Cac8I GCNNGC 5 cut(s) 463, 467, 719, 849, 1432
CfoI GCGC 1 cut(s) 422
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 2 cut(s) 1082, 1335
ClaI ATCGAT 1 cut(s) 1934
Csp6I GTAC 4 cut(s) 92, 479, 672, 1619
CspAI ACCGGT 1 cut(s) 26
CspCI CAANNNNNGTGG 2 cut(s) 1512, 1547
CviQI GTAC 4 cut(s) 92, 479, 672, 1619
DdeI CTNAG 9 cut(s) 19, 141, 319, 816, 863, 932, 1140, 1239, 1906
DpnI GATC 7 cut(s) 69, 102, 289, 393, 939, 1516, 1671
DpnII GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
Eam1104I CTCTTC 2 cut(s) 50, 1818
EarI CTCTTC 2 cut(s) 50, 1818
Eco130I CCWWGG 1 cut(s) 973
Eco24I GRGCYC 1 cut(s) 1377
Eco31I GGTCTC 1 cut(s) 1822
Eco32I GATATC 2 cut(s) 197, 694
Eco47I GGWCC 1 cut(s) 1082
Eco57I CTGAAG 4 cut(s) 783, 1184, 1842, 1938
Eco81I CCTNAGG 1 cut(s) 319
Eco88I CYCGRG 2 cut(s) 298, 1368
Eco91I GGTNACC 1 cut(s) 968
EcoO65I GGTNACC 1 cut(s) 968
EcoRI GAATTC 4 cut(s) 502, 752, 1144, 1268
EcoRII CCWGG 4 cut(s) 76, 760, 1482, 1894
EcoRV GATATC 2 cut(s) 197, 694
EcoT14I CCWWGG 1 cut(s) 973
EcoT22I ATGCAT 2 cut(s) 1699, 1944
EcoT38I GRGCYC 1 cut(s) 1377
ErhI CCWWGG 1 cut(s) 973
FalI AAGNNNNNCTT 2 cut(s) 957, 989
FaqI GGGAC 3 cut(s) 300, 900, 1809
FauNDI CATATG 2 cut(s) 679, 1543
FblI GTMKAC 2 cut(s) 348, 1918
Fnu4HI GCNGC 5 cut(s) 715, 795, 868, 1054, 1892
FokI GGATG 5 cut(s) 109, 266, 713, 802, 1723
FriOI GRGCYC 1 cut(s) 1377
Fsp4HI GCNGC 5 cut(s) 715, 795, 868, 1054, 1892
FspBI CTAG 8 cut(s) 201, 209, 386, 579, 806, 848, 1398, 1431
GlaI GCGC 1 cut(s) 421
GluI GCNGC 5 cut(s) 715, 795, 868, 1054, 1892
GsaI CCCAGC 2 cut(s) 334, 1067
GsuI CTGGAG 2 cut(s) 60, 970
HaeIII GGCC 2 cut(s) 1336, 1482
HapII CCGG 1 cut(s) 27
HhaI GCGC 1 cut(s) 422
Hin6I GCGC 1 cut(s) 420
HinP1I GCGC 1 cut(s) 420
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HindIII AAGCTT 3 cut(s) 5, 1220, 1285
HinfI GANTC 8 cut(s) 313, 538, 1394, 1656, 1754, 1915, 1925, 1985
HpaII CCGG 1 cut(s) 27
HphI GGTGA 6 cut(s) 213, 1379, 1514, 1664, 1920, 1960
Hpy166II GTNNAC 3 cut(s) 349, 672, 1919
Hpy188I TCNGA 7 cut(s) 268, 802, 1474, 1597, 1771, 1909, 1957
Hpy8I GTNNAC 3 cut(s) 349, 672, 1919
HpyAV CCTTC 3 cut(s) 127, 1064, 1694
HpyCH4III ACNGT 3 cut(s) 382, 874, 1707
HpyCH4IV ACGT 2 cut(s) 1745, 1750
HpyF10VI GCNNNNNNNGC 1 cut(s) 1333
HpyF3I CTNAG 9 cut(s) 19, 141, 319, 816, 863, 932, 1140, 1239, 1906
HpySE526I ACGT 2 cut(s) 1745, 1750
HspAI GCGC 1 cut(s) 420
Kzo9I GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
LguI GCTCTTC 1 cut(s) 50
LmnI GCTCC 4 cut(s) 79, 137, 1380, 1561
Lsp1109I GCAGC 5 cut(s) 701, 781, 854, 1065, 1903
LweI GCATC 2 cut(s) 1701, 1929
MaeI CTAG 8 cut(s) 201, 209, 386, 579, 806, 848, 1398, 1431
MaeII ACGT 2 cut(s) 1745, 1750
MaeIII GTNAC 5 cut(s) 22, 181, 968, 1028, 1746
MalI GATC 7 cut(s) 69, 102, 289, 393, 939, 1516, 1671
MboI GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
MflI RGATCY 2 cut(s) 67, 100
MhlI GDGCHC 3 cut(s) 62, 1100, 1377
MlyI GAGTC 5 cut(s) 322, 532, 1388, 1924, 1994
MmeI TCCRAC 1 cut(s) 1962
Mph1103I ATGCAT 2 cut(s) 1699, 1944
MseI TTAA 8 cut(s) 545, 569, 893, 1103, 1259, 1403, 1733, 1778
MspA1I CMGCKG 1 cut(s) 867
MspI CCGG 1 cut(s) 27
MspR9I CCNGG 4 cut(s) 78, 762, 1484, 1896
MvaI CCWGG 4 cut(s) 78, 762, 1484, 1896
MwoI GCNNNNNNNGC 1 cut(s) 1333
NdeI CATATG 2 cut(s) 679, 1543
NdeII GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
NheI GCTAGC 2 cut(s) 847, 1430
NlaIV GGNNCC 2 cut(s) 1376, 1557
NsiI ATGCAT 2 cut(s) 1699, 1944
NspI RCATGY 3 cut(s) 465, 1697, 1840
PaeI GCATGC 1 cut(s) 465
PaeR7I CTCGAG 2 cut(s) 298, 1368
PciI ACATGT 1 cut(s) 1836
PciSI GCTCTTC 1 cut(s) 50
PfeI GAWTC 3 cut(s) 1656, 1754, 1925
PfoI TCCNGGA 1 cut(s) 76
PinAI ACCGGT 1 cut(s) 26
PkrI GCNGC 5 cut(s) 716, 796, 869, 1055, 1893
PleI GAGTC 5 cut(s) 321, 532, 1388, 1923, 1993
PpsI GAGTC 5 cut(s) 321, 532, 1388, 1923, 1993
Ppu21I YACGTR 1 cut(s) 1751
PscI ACATGT 1 cut(s) 1836
PshBI ATTAAT 3 cut(s) 893, 1103, 1733
Psp6I CCWGG 4 cut(s) 76, 760, 1482, 1894
PspEI GGTNACC 1 cut(s) 968
PspFI CCCAGC 2 cut(s) 330, 1063
PspGI CCWGG 4 cut(s) 76, 760, 1482, 1894
PspN4I GGNNCC 2 cut(s) 1376, 1557
PspPI GGNCC 2 cut(s) 1082, 1335
PspXI VCTCGAGB 1 cut(s) 1368
PsrI GAACNNNNNNTAC 2 cut(s) 1902, 1934
PsuI RGATCY 2 cut(s) 67, 100
PvuII CAGCTG 1 cut(s) 867
RsaI GTAC 4 cut(s) 93, 480, 673, 1620
RsaNI GTAC 4 cut(s) 92, 479, 672, 1619
SalI GTCGAC 1 cut(s) 347
SapI GCTCTTC 1 cut(s) 50
SaqAI TTAA 8 cut(s) 545, 569, 893, 1103, 1259, 1403, 1733, 1778
SatI GCNGC 5 cut(s) 715, 795, 868, 1054, 1892
Sau3AI GATC 7 cut(s) 67, 100, 287, 391, 937, 1514, 1669
Sau96I GGNCC 2 cut(s) 1082, 1335
SchI GAGTC 5 cut(s) 322, 532, 1388, 1924, 1994
ScrFI CCNGG 4 cut(s) 78, 762, 1484, 1896
SduI GDGCHC 3 cut(s) 62, 1100, 1377
SfaNI GCATC 2 cut(s) 1701, 1929
SfcI CTRYAG 1 cut(s) 378
Sfr274I CTCGAG 2 cut(s) 298, 1368
SinI GGWCC 1 cut(s) 1082
SlaI CTCGAG 2 cut(s) 298, 1368
SmlI CTYRAG 3 cut(s) 298, 632, 1368
SmoI CTYRAG 3 cut(s) 298, 632, 1368
SphI GCATGC 1 cut(s) 465
SsiI CCGC 2 cut(s) 1207, 1500
SspI AATATT 1 cut(s) 1438
SspMI CTAG 8 cut(s) 201, 209, 386, 579, 806, 848, 1398, 1431
StyD4I CCNGG 4 cut(s) 76, 760, 1482, 1894
StyI CCWWGG 1 cut(s) 973
TaaI ACNGT 3 cut(s) 382, 874, 1707
TaiI ACGT 2 cut(s) 1748, 1753
TaqI TCGA 6 cut(s) 299, 348, 1329, 1369, 1446, 1934
TatI WGTACW 1 cut(s) 1618
TfiI GAWTC 3 cut(s) 1656, 1754, 1925
Tru1I TTAA 8 cut(s) 545, 569, 893, 1103, 1259, 1403, 1733, 1778
Tru9I TTAA 8 cut(s) 545, 569, 893, 1103, 1259, 1403, 1733, 1778
TscAI CASTG 5 cut(s) 401, 559, 1092, 1243, 1710
TseI GCWGC 5 cut(s) 714, 794, 867, 1053, 1891
TspGWI ACGGA 3 cut(s) 109, 802, 1927
TspRI CASTG 5 cut(s) 401, 559, 1092, 1243, 1710
VpaK11BI GGWCC 1 cut(s) 1082
VspI ATTAAT 3 cut(s) 893, 1103, 1733
XapI RAATTY 7 cut(s) 120, 502, 571, 752, 1144, 1268, 1578
XbaI TCTAGA 2 cut(s) 208, 1397
XceI RCATGY 3 cut(s) 465, 1697, 1840
XcmI CCANNNNNNNNNTGG 2 cut(s) 1285, 1978
XhoI CTCGAG 2 cut(s) 298, 1368
XmiI GTMKAC 2 cut(s) 348, 1918
XspI CTAG 8 cut(s) 201, 209, 386, 579, 806, 848, 1398, 1431
Zsp2I ATGCAT 2 cut(s) 1699, 1944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.