F-box-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 780, 929 |
| Acc16I | TGCGCA | 1 cut(s) | 95 |
| Acc36I | ACCTGC | 1 cut(s) | 730 |
| AccB1I | GGYRCC | 1 cut(s) | 1821 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 629, 1229 |
| AccII | CGCG | 3 cut(s) | 78, 80, 1846 |
| AccIII | TCCGGA | 1 cut(s) | 1523 |
| AciI | CCGC | 5 cut(s) | 242, 660, 1318, 1758, 1846 |
| AclWI | GGATC | 8 cut(s) | 328, 494, 644, 657, 833, 878, 1193, 1462 |
| AcoI | YGGCCR | 2 cut(s) | 1755, 1837 |
| AcsI | RAATTY | 3 cut(s) | 177, 522, 1743 |
| AcuI | CTGAAG | 1 cut(s) | 270 |
| AfaI | GTAC | 4 cut(s) | 379, 706, 999, 1621 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 517, 629, 659, 1022, 1023, 1058, 1229 |
| AflIII | ACRYGT | 2 cut(s) | 1622, 1700 |
| AgsI | TTSAA | 9 cut(s) | 29, 530, 747, 950, 1097, 1156, 1332, 1450, 1576 |
| AjnI | CCWGG | 4 cut(s) | 414, 516, 1609, 1817 |
| AluBI | AGCT | 8 cut(s) | 110, 1353, 1538, 1568, 1572, 1769, 1813, 1856 |
| AluI | AGCT | 8 cut(s) | 110, 1353, 1538, 1568, 1572, 1769, 1813, 1856 |
| Alw21I | GWGCWC | 1 cut(s) | 112 |
| Alw26I | GTCTC | 1 cut(s) | 670 |
| AlwI | GGATC | 8 cut(s) | 328, 494, 644, 657, 833, 878, 1193, 1462 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1856 |
| Ama87I | CYCGRG | 1 cut(s) | 199 |
| Aor13HI | TCCGGA | 1 cut(s) | 1523 |
| AoxI | GGCC | 5 cut(s) | 63, 1594, 1628, 1755, 1837 |
| ApeKI | GCWGC | 2 cut(s) | 1538, 1853 |
| ApoI | RAATTY | 3 cut(s) | 177, 522, 1743 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 929, 961 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 525 |
| AspLEI | GCGC | 4 cut(s) | 78, 80, 82, 96 |
| AspS9I | GGNCC | 6 cut(s) | 254, 979, 1429, 1628, 1788, 1865 |
| AsuC2I | CCSGG | 2 cut(s) | 200, 201 |
| AsuHPI | GGTGA | 9 cut(s) | 16, 209, 509, 623, 674, 947, 1073, 1208, 1630 |
| AsuNHI | GCTAGC | 1 cut(s) | 1568 |
| AvaI | CYCGRG | 1 cut(s) | 199 |
| AvaII | GGWCC | 5 cut(s) | 254, 979, 1429, 1788, 1865 |
| BalI | TGGCCA | 1 cut(s) | 1839 |
| BamHI | GGATCC | 1 cut(s) | 649 |
| BanI | GGYRCC | 1 cut(s) | 1821 |
| BanII | GRGCYC | 1 cut(s) | 112 |
| BauI | CACGAG | 1 cut(s) | 38 |
| BbsI | GAAGAC | 2 cut(s) | 46, 1163 |
| Bbv12I | GWGCWC | 1 cut(s) | 112 |
| BbvI | GCAGC | 2 cut(s) | 1525, 1865 |
| BccI | CCATC | 2 cut(s) | 452, 608 |
| BciT130I | CCWGG | 4 cut(s) | 416, 518, 1611, 1819 |
| BclI | TGATCA | 3 cut(s) | 421, 538, 1063 |
| BcnI | CCSGG | 2 cut(s) | 200, 201 |
| BcoDI | GTCTC | 1 cut(s) | 670 |
| BfaI | CTAG | 2 cut(s) | 183, 1569 |
| BfmI | CTRYAG | 1 cut(s) | 1346 |
| BfuAI | ACCTGC | 1 cut(s) | 730 |
| BisI | GCNGC | 3 cut(s) | 1539, 1758, 1854 |
| BlsI | GCNGC | 3 cut(s) | 1540, 1759, 1855 |
| Bme1390I | CCNGG | 6 cut(s) | 200, 201, 416, 518, 1611, 1819 |
| Bme18I | GGWCC | 5 cut(s) | 254, 979, 1429, 1788, 1865 |
| BmeT110I | CYCGRG | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 6 cut(s) | 254, 979, 1429, 1628, 1788, 1865 |
| BmiI | GGNNCC | 5 cut(s) | 651, 980, 1384, 1533, 1823 |
| BmrFI | CCNGG | 6 cut(s) | 200, 201, 416, 518, 1611, 1819 |
| BmrI | ACTGGG | 1 cut(s) | 1292 |
| BmsI | GCATC | 1 cut(s) | 81 |
| BmtI | GCTAGC | 1 cut(s) | 1572 |
| BmuI | ACTGGG | 1 cut(s) | 1292 |
| BpiI | GAAGAC | 2 cut(s) | 46, 1163 |
| BpuEI | CTTGAG | 2 cut(s) | 273, 368 |
| BpuMI | CCSGG | 2 cut(s) | 200, 201 |
| BsaI | GGTCTC | 1 cut(s) | 670 |
| BsaJI | CCNNGG | 8 cut(s) | 66, 199, 516, 653, 828, 1223, 1297, 1591 |
| BsaWI | WCCGGW | 1 cut(s) | 1523 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 517, 629, 659, 1022, 1023, 1058, 1229 |
| Bse1I | ACTGG | 3 cut(s) | 493, 901, 1287 |
| Bse3DI | GCAATG | 1 cut(s) | 939 |
| BseAI | TCCGGA | 1 cut(s) | 1523 |
| BseBI | CCWGG | 4 cut(s) | 416, 518, 1611, 1819 |
| BseDI | CCNNGG | 8 cut(s) | 66, 199, 516, 653, 828, 1223, 1297, 1591 |
| BseGI | GGATG | 3 cut(s) | 424, 1327, 1806 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 517, 629, 659, 1022, 1023, 1058, 1229 |
| BseMI | GCAATG | 1 cut(s) | 939 |
| BseMII | CTCAG | 5 cut(s) | 221, 315, 867, 962, 1848 |
| BseNI | ACTGG | 3 cut(s) | 493, 901, 1287 |
| BsePI | GCGCGC | 2 cut(s) | 76, 78 |
| BseRI | GAGGAG | 1 cut(s) | 1042 |
| BseXI | GCAGC | 2 cut(s) | 1525, 1865 |
| BseYI | CCCAGC | 1 cut(s) | 1212 |
| Bsh1236I | CGCG | 3 cut(s) | 78, 80, 1846 |
| BshFI | GGCC | 5 cut(s) | 65, 1596, 1630, 1757, 1839 |
| BshNI | GGYRCC | 1 cut(s) | 1821 |
| BsiHKAI | GWGCWC | 1 cut(s) | 112 |
| BsiHKCI | CYCGRG | 1 cut(s) | 199 |
| BsiSI | CCGG | 3 cut(s) | 62, 200, 1524 |
| BslFI | GGGAC | 1 cut(s) | 992 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 517, 629, 659, 1022, 1023, 1058, 1229 |
| BsmAI | GTCTC | 1 cut(s) | 670 |
| BsmFI | GGGAC | 1 cut(s) | 992 |
| BsnI | GGCC | 5 cut(s) | 65, 1596, 1630, 1757, 1839 |
| Bso31I | GGTCTC | 1 cut(s) | 670 |
| BsoBI | CYCGRG | 1 cut(s) | 199 |
| Bsp1286I | GDGCHC | 1 cut(s) | 112 |
| Bsp13I | TCCGGA | 1 cut(s) | 1523 |
| Bsp19I | CCATGG | 3 cut(s) | 828, 1223, 1591 |
| BspACI | CCGC | 5 cut(s) | 242, 660, 1318, 1758, 1846 |
| BspANI | GGCC | 5 cut(s) | 65, 1596, 1630, 1757, 1839 |
| BspCNI | CTCAG | 5 cut(s) | 222, 314, 868, 963, 1849 |
| BspEI | TCCGGA | 1 cut(s) | 1523 |
| BspFNI | CGCG | 3 cut(s) | 78, 80, 1846 |
| BspHI | TCATGA | 2 cut(s) | 115, 1880 |
| BspLI | GGNNCC | 5 cut(s) | 651, 980, 1384, 1533, 1823 |
| BspMI | ACCTGC | 1 cut(s) | 730 |
| BspOI | GCTAGC | 1 cut(s) | 1572 |
| BspPI | GGATC | 8 cut(s) | 328, 494, 644, 657, 833, 878, 1193, 1462 |
| BspT107I | GGYRCC | 1 cut(s) | 1821 |
| BspTNI | GGTCTC | 1 cut(s) | 670 |
| BsrDI | GCAATG | 1 cut(s) | 939 |
| BsrI | ACTGG | 3 cut(s) | 493, 901, 1287 |
| BssECI | CCNNGG | 8 cut(s) | 66, 199, 516, 653, 828, 1223, 1297, 1591 |
| BssHII | GCGCGC | 2 cut(s) | 76, 78 |
| BssSI | CACGAG | 1 cut(s) | 38 |
| BssT1I | CCWWGG | 4 cut(s) | 828, 1223, 1297, 1591 |
| Bst2BI | CACGAG | 1 cut(s) | 38 |
| Bst2UI | CCWGG | 4 cut(s) | 416, 518, 1611, 1819 |
| Bst4CI | ACNGT | 9 cut(s) | 104, 147, 592, 644, 806, 983, 1012, 1479, 1642 |
| Bst6I | CTCTTC | 1 cut(s) | 945 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 512 |
| BstC8I | GCNNGC | 3 cut(s) | 78, 80, 1570 |
| BstDEI | CTNAG | 7 cut(s) | 230, 301, 584, 876, 971, 1361, 1857 |
| BstDSI | CCRYGG | 4 cut(s) | 653, 828, 1223, 1591 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1056 |
| BstF5I | GGATG | 3 cut(s) | 424, 1327, 1806 |
| BstFNI | CGCG | 3 cut(s) | 78, 80, 1846 |
| BstHHI | GCGC | 4 cut(s) | 78, 80, 82, 96 |
| BstMAI | GTCTC | 1 cut(s) | 670 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 77, 86, 483, 512, 1615, 1747, 1766, 1775, 1819 |
| BstNI | CCWGG | 4 cut(s) | 416, 518, 1611, 1819 |
| BstNSI | RCATGY | 2 cut(s) | 1626, 1704 |
| BstSCI | CCNGG | 6 cut(s) | 198, 199, 414, 516, 1609, 1817 |
| BstSFI | CTRYAG | 1 cut(s) | 1346 |
| BstUI | CGCG | 3 cut(s) | 78, 80, 1846 |
| BstV1I | GCAGC | 2 cut(s) | 1525, 1865 |
| BstV2I | GAAGAC | 2 cut(s) | 46, 1163 |
| BstX2I | RGATCY | 2 cut(s) | 649, 883 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 566 |
| BstYI | RGATCY | 2 cut(s) | 649, 883 |
| BsuRI | GGCC | 5 cut(s) | 65, 1596, 1630, 1757, 1839 |
| BtgI | CCRYGG | 4 cut(s) | 653, 828, 1223, 1591 |
| BtgZI | GCGATG | 2 cut(s) | 104, 354 |
| BtsCI | GGATG | 3 cut(s) | 424, 1327, 1806 |
| BtsIMutI | CAGTG | 7 cut(s) | 143, 309, 486, 597, 720, 894, 1581 |
| BveI | ACCTGC | 1 cut(s) | 730 |
| Cac8I | GCNNGC | 3 cut(s) | 78, 80, 1570 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1856 |
| CciI | TCATGA | 2 cut(s) | 115, 1880 |
| CfoI | GCGC | 4 cut(s) | 78, 80, 82, 96 |
| Cfr13I | GGNCC | 6 cut(s) | 254, 979, 1429, 1628, 1788, 1865 |
| Cfr9I | CCCGGG | 1 cut(s) | 199 |
| CseI | GACGC | 1 cut(s) | 1328 |
| Csp6I | GTAC | 4 cut(s) | 378, 705, 998, 1620 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 955, 990 |
| CviQI | GTAC | 4 cut(s) | 378, 705, 998, 1620 |
| DdeI | CTNAG | 7 cut(s) | 230, 301, 584, 876, 971, 1361, 1857 |
| DraI | TTTAAA | 2 cut(s) | 396, 1305 |
| EaeI | YGGCCR | 2 cut(s) | 1755, 1837 |
| Eam1104I | CTCTTC | 1 cut(s) | 945 |
| EarI | CTCTTC | 1 cut(s) | 945 |
| Ecl136II | GAGCTC | 1 cut(s) | 110 |
| Eco130I | CCWWGG | 4 cut(s) | 828, 1223, 1297, 1591 |
| Eco24I | GRGCYC | 1 cut(s) | 112 |
| Eco31I | GGTCTC | 1 cut(s) | 670 |
| Eco47I | GGWCC | 5 cut(s) | 254, 979, 1429, 1788, 1865 |
| Eco53kI | GAGCTC | 1 cut(s) | 110 |
| Eco57I | CTGAAG | 1 cut(s) | 270 |
| Eco88I | CYCGRG | 1 cut(s) | 199 |
| EcoICRI | GAGCTC | 1 cut(s) | 110 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1056 |
| EcoO109I | RGGNCCY | 1 cut(s) | 254 |
| EcoRI | GAATTC | 2 cut(s) | 177, 1743 |
| EcoRII | CCWGG | 4 cut(s) | 414, 516, 1609, 1817 |
| EcoT14I | CCWWGG | 4 cut(s) | 828, 1223, 1297, 1591 |
| EcoT38I | GRGCYC | 1 cut(s) | 112 |
| ErhI | CCWWGG | 4 cut(s) | 828, 1223, 1297, 1591 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 435, 467 |
| FaqI | GGGAC | 1 cut(s) | 992 |
| FauI | CCCGC | 1 cut(s) | 1311 |
| FauNDI | CATATG | 1 cut(s) | 1774 |
| FbaI | TGATCA | 3 cut(s) | 421, 538, 1063 |
| Fnu4HI | GCNGC | 3 cut(s) | 1539, 1758, 1854 |
| FokI | GGATG | 3 cut(s) | 431, 1334, 1793 |
| FriOI | GRGCYC | 1 cut(s) | 112 |
| Fsp4HI | GCNGC | 3 cut(s) | 1539, 1758, 1854 |
| FspAI | RTGCGCAY | 1 cut(s) | 95 |
| FspBI | CTAG | 2 cut(s) | 183, 1569 |
| FspI | TGCGCA | 1 cut(s) | 95 |
| GlaI | GCGC | 4 cut(s) | 77, 79, 81, 95 |
| GluI | GCNGC | 3 cut(s) | 1539, 1758, 1854 |
| GsaI | CCCAGC | 1 cut(s) | 1216 |
| HaeIII | GGCC | 5 cut(s) | 65, 1596, 1630, 1757, 1839 |
| HapII | CCGG | 3 cut(s) | 62, 200, 1524 |
| HgaI | GACGC | 1 cut(s) | 1328 |
| HhaI | GCGC | 4 cut(s) | 78, 80, 82, 96 |
| Hin6I | GCGC | 4 cut(s) | 76, 78, 80, 94 |
| HinP1I | GCGC | 4 cut(s) | 76, 78, 80, 94 |
| HincII | GTYRAC | 1 cut(s) | 1482 |
| HindII | GTYRAC | 1 cut(s) | 1482 |
| HinfI | GANTC | 2 cut(s) | 13, 1112 |
| HpaII | CCGG | 3 cut(s) | 62, 200, 1524 |
| HphI | GGTGA | 9 cut(s) | 16, 209, 509, 623, 674, 947, 1073, 1208, 1630 |
| Hpy166II | GTNNAC | 1 cut(s) | 1482 |
| Hpy188I | TCNGA | 7 cut(s) | 164, 250, 384, 699, 802, 909, 1475 |
| Hpy188III | TCNNGA | 6 cut(s) | 116, 257, 597, 1289, 1524, 1881 |
| Hpy8I | GTNNAC | 1 cut(s) | 1482 |
| Hpy99I | CGWCG | 1 cut(s) | 1646 |
| HpyAV | CCTTC | 5 cut(s) | 245, 1456, 1521, 1545, 1697 |
| HpyCH4III | ACNGT | 9 cut(s) | 104, 147, 592, 644, 806, 983, 1012, 1479, 1642 |
| HpyCH4IV | ACGT | 2 cut(s) | 834, 921 |
| HpyCH4V | TGCA | 7 cut(s) | 944, 1048, 1082, 1561, 1649, 1664, 1778 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 77, 86, 483, 512, 1615, 1747, 1766, 1775, 1819 |
| HpyF3I | CTNAG | 7 cut(s) | 230, 301, 584, 876, 971, 1361, 1857 |
| HpySE526I | ACGT | 2 cut(s) | 834, 921 |
| HspAI | GCGC | 4 cut(s) | 76, 78, 80, 94 |
| Kpn2I | TCCGGA | 1 cut(s) | 1523 |
| Ksp22I | TGATCA | 3 cut(s) | 421, 538, 1063 |
| LmnI | GCTCC | 7 cut(s) | 53, 107, 408, 1232, 1382, 1403, 1774 |
| Lsp1109I | GCAGC | 2 cut(s) | 1525, 1865 |
| LweI | GCATC | 1 cut(s) | 81 |
| MaeI | CTAG | 2 cut(s) | 183, 1569 |
| MaeII | ACGT | 2 cut(s) | 834, 921 |
| MaeIII | GTNAC | 4 cut(s) | 266, 864, 935, 1696 |
| MboII | GAAGA | 7 cut(s) | 8, 14, 17, 46, 518, 962, 1168 |
| MfeI | CAATTG | 3 cut(s) | 789, 1083, 1244 |
| MflI | RGATCY | 2 cut(s) | 649, 883 |
| MhlI | GDGCHC | 1 cut(s) | 112 |
| MlsI | TGGCCA | 1 cut(s) | 1839 |
| MluNI | TGGCCA | 1 cut(s) | 1839 |
| MlyI | GAGTC | 1 cut(s) | 1121 |
| MmeI | TCCRAC | 4 cut(s) | 386, 825, 1415, 1697 |
| Mox20I | TGGCCA | 1 cut(s) | 1839 |
| MroI | TCCGGA | 1 cut(s) | 1523 |
| MroXI | GAANNNNTTC | 1 cut(s) | 525 |
| MscI | TGGCCA | 1 cut(s) | 1839 |
| MseI | TTAA | 9 cut(s) | 327, 395, 735, 1002, 1020, 1304, 1355, 1490, 1506 |
| Msp20I | TGGCCA | 1 cut(s) | 1839 |
| MspA1I | CMGCKG | 4 cut(s) | 244, 1538, 1813, 1856 |
| MspI | CCGG | 3 cut(s) | 62, 200, 1524 |
| MspR9I | CCNGG | 6 cut(s) | 200, 201, 416, 518, 1611, 1819 |
| MunI | CAATTG | 3 cut(s) | 789, 1083, 1244 |
| MvaI | CCWGG | 4 cut(s) | 416, 518, 1611, 1819 |
| MvnI | CGCG | 3 cut(s) | 78, 80, 1846 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 77, 86, 483, 512, 1615, 1747, 1766, 1775, 1819 |
| NciI | CCSGG | 2 cut(s) | 200, 201 |
| NcoI | CCATGG | 3 cut(s) | 828, 1223, 1591 |
| NdeI | CATATG | 1 cut(s) | 1774 |
| NheI | GCTAGC | 1 cut(s) | 1568 |
| NlaIV | GGNNCC | 5 cut(s) | 651, 980, 1384, 1533, 1823 |
| NmeAIII | GCCGAG | 2 cut(s) | 47, 1135 |
| NmuCI | GTSAC | 1 cut(s) | 935 |
| NsbI | TGCGCA | 1 cut(s) | 95 |
| NspI | RCATGY | 2 cut(s) | 1626, 1704 |
| PagI | TCATGA | 2 cut(s) | 115, 1880 |
| PauI | GCGCGC | 2 cut(s) | 76, 78 |
| PciI | ACATGT | 2 cut(s) | 1622, 1700 |
| PdmI | GAANNNNTTC | 1 cut(s) | 525 |
| PfeI | GAWTC | 1 cut(s) | 13 |
| PflFI | GACNNNGTC | 1 cut(s) | 1284 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 629, 1229 |
| PkrI | GCNGC | 3 cut(s) | 1540, 1759, 1855 |
| PleI | GAGTC | 1 cut(s) | 1120 |
| PpsI | GAGTC | 1 cut(s) | 1120 |
| PpuMI | RGGWCCY | 1 cut(s) | 254 |
| PscI | ACATGT | 2 cut(s) | 1622, 1700 |
| PsiI | TTATAA | 2 cut(s) | 780, 929 |
| Psp124BI | GAGCTC | 1 cut(s) | 112 |
| Psp5II | RGGWCCY | 1 cut(s) | 254 |
| Psp6I | CCWGG | 4 cut(s) | 414, 516, 1609, 1817 |
| PspFI | CCCAGC | 1 cut(s) | 1212 |
| PspGI | CCWGG | 4 cut(s) | 414, 516, 1609, 1817 |
| PspN4I | GGNNCC | 5 cut(s) | 651, 980, 1384, 1533, 1823 |
| PspPI | GGNCC | 6 cut(s) | 254, 979, 1429, 1628, 1788, 1865 |
| PspPPI | RGGWCCY | 1 cut(s) | 254 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1856 |
| PsuI | RGATCY | 2 cut(s) | 649, 883 |
| PsyI | GACNNNGTC | 1 cut(s) | 1284 |
| PteI | GCGCGC | 2 cut(s) | 76, 78 |
| PvuII | CAGCTG | 3 cut(s) | 1538, 1813, 1856 |
| RsaI | GTAC | 4 cut(s) | 379, 706, 999, 1621 |
| RsaNI | GTAC | 4 cut(s) | 378, 705, 998, 1620 |
| SacI | GAGCTC | 1 cut(s) | 112 |
| SaqAI | TTAA | 9 cut(s) | 327, 395, 735, 1002, 1020, 1304, 1355, 1490, 1506 |
| SatI | GCNGC | 3 cut(s) | 1539, 1758, 1854 |
| Sau96I | GGNCC | 6 cut(s) | 254, 979, 1429, 1628, 1788, 1865 |
| SchI | GAGTC | 1 cut(s) | 1121 |
| ScrFI | CCNGG | 6 cut(s) | 200, 201, 416, 518, 1611, 1819 |
| SduI | GDGCHC | 1 cut(s) | 112 |
| SfaNI | GCATC | 1 cut(s) | 81 |
| SfcI | CTRYAG | 1 cut(s) | 1346 |
| SinI | GGWCC | 5 cut(s) | 254, 979, 1429, 1788, 1865 |
| SmaI | CCCGGG | 1 cut(s) | 201 |
| SmlI | CTYRAG | 2 cut(s) | 288, 347 |
| SmoI | CTYRAG | 2 cut(s) | 288, 347 |
| SsiI | CCGC | 5 cut(s) | 242, 660, 1318, 1758, 1846 |
| SspMI | CTAG | 2 cut(s) | 183, 1569 |
| SstI | GAGCTC | 1 cut(s) | 112 |
| StyD4I | CCNGG | 6 cut(s) | 198, 199, 414, 516, 1609, 1817 |
| StyI | CCWWGG | 4 cut(s) | 828, 1223, 1297, 1591 |
| TaaI | ACNGT | 9 cut(s) | 104, 147, 592, 644, 806, 983, 1012, 1479, 1642 |
| TaiI | ACGT | 2 cut(s) | 837, 924 |
| TaqI | TCGA | 4 cut(s) | 11, 372, 857, 1115 |
| TatI | WGTACW | 1 cut(s) | 997 |
| TauI | GCSGC | 1 cut(s) | 1760 |
| TfiI | GAWTC | 1 cut(s) | 13 |
| Tru1I | TTAA | 9 cut(s) | 327, 395, 735, 1002, 1020, 1304, 1355, 1490, 1506 |
| Tru9I | TTAA | 9 cut(s) | 327, 395, 735, 1002, 1020, 1304, 1355, 1490, 1506 |
| TscAI | CASTG | 7 cut(s) | 150, 309, 493, 597, 727, 901, 1588 |
| TseFI | GTSAC | 1 cut(s) | 935 |
| TseI | GCWGC | 2 cut(s) | 1538, 1853 |
| Tsp45I | GTSAC | 1 cut(s) | 935 |
| TspDTI | ATGAA | 5 cut(s) | 8, 113, 470, 1146, 1869 |
| TspGWI | ACGGA | 4 cut(s) | 40, 642, 1191, 1293 |
| TspMI | CCCGGG | 1 cut(s) | 199 |
| TspRI | CASTG | 7 cut(s) | 150, 309, 493, 597, 727, 901, 1588 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1284 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 629, 1229 |
| VpaK11BI | GGWCC | 5 cut(s) | 254, 979, 1429, 1788, 1865 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1056 |
| XapI | RAATTY | 3 cut(s) | 177, 522, 1743 |
| XceI | RCATGY | 2 cut(s) | 1626, 1704 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1598, 1832 |
| XmaI | CCCGGG | 1 cut(s) | 199 |
| XmnI | GAANNNNTTC | 1 cut(s) | 525 |
| XspI | CTAG | 2 cut(s) | 183, 1569 |