F-box-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 311 |
| AccII | CGCG | 2 cut(s) | 317, 573 |
| AciI | CCGC | 9 cut(s) | 50, 88, 92, 315, 317, 383, 476, 601, 704 |
| AclWI | GGATC | 3 cut(s) | 441, 512, 560 |
| AcoI | YGGCCR | 3 cut(s) | 213, 234, 840 |
| AcsI | RAATTY | 3 cut(s) | 955, 979, 998 |
| AcuI | CTGAAG | 1 cut(s) | 846 |
| AfaI | GTAC | 1 cut(s) | 379 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 345, 600, 694, 1036 |
| AgsI | TTSAA | 4 cut(s) | 678, 770, 893, 960 |
| AjnI | CCWGG | 2 cut(s) | 478, 593 |
| AleI | CACNNNNGTG | 1 cut(s) | 544 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 762, 794 |
| AluBI | AGCT | 5 cut(s) | 74, 473, 674, 826, 1103 |
| AluI | AGCT | 5 cut(s) | 74, 473, 674, 826, 1103 |
| Alw21I | GWGCWC | 1 cut(s) | 64 |
| Alw26I | GTCTC | 3 cut(s) | 697, 807, 1042 |
| AlwI | GGATC | 3 cut(s) | 441, 512, 560 |
| AoxI | GGCC | 5 cut(s) | 51, 213, 234, 840, 962 |
| ApeKI | GCWGC | 2 cut(s) | 598, 634 |
| ApoI | RAATTY | 3 cut(s) | 955, 979, 998 |
| AspA2I | CCTAGG | 1 cut(s) | 413 |
| AspLEI | GCGC | 1 cut(s) | 115 |
| AspS9I | GGNCC | 2 cut(s) | 52, 963 |
| AsuC2I | CCSGG | 4 cut(s) | 69, 340, 666, 786 |
| AsuHPI | GGTGA | 2 cut(s) | 439, 531 |
| AsuII | TTCGAA | 1 cut(s) | 98 |
| AvrII | CCTAGG | 1 cut(s) | 413 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 181, 214 |
| BalI | TGGCCA | 1 cut(s) | 215 |
| BanI | GGYRCC | 1 cut(s) | 311 |
| BbsI | GAAGAC | 1 cut(s) | 566 |
| Bbv12I | GWGCWC | 1 cut(s) | 64 |
| BbvI | GCAGC | 2 cut(s) | 610, 646 |
| BccI | CCATC | 9 cut(s) | 8, 191, 205, 457, 704, 716, 826, 910, 914 |
| BceAI | ACGGC | 2 cut(s) | 92, 391 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 484, 518 |
| BciT130I | CCWGG | 2 cut(s) | 480, 595 |
| BcnI | CCSGG | 4 cut(s) | 69, 340, 666, 786 |
| BcoDI | GTCTC | 3 cut(s) | 697, 807, 1042 |
| BfaI | CTAG | 2 cut(s) | 335, 414 |
| BfmI | CTRYAG | 1 cut(s) | 632 |
| BisI | GCNGC | 4 cut(s) | 51, 315, 599, 635 |
| BlnI | CCTAGG | 1 cut(s) | 413 |
| BlpI | GCTNAGC | 1 cut(s) | 402 |
| BlsI | GCNGC | 4 cut(s) | 52, 316, 600, 636 |
| Bme1390I | CCNGG | 6 cut(s) | 69, 340, 480, 595, 666, 786 |
| BmgT120I | GGNCC | 2 cut(s) | 52, 963 |
| BmiI | GGNNCC | 3 cut(s) | 313, 851, 965 |
| BmrFI | CCNGG | 6 cut(s) | 69, 340, 480, 595, 666, 786 |
| BmrI | ACTGGG | 1 cut(s) | 683 |
| BmsI | GCATC | 2 cut(s) | 37, 153 |
| BmuI | ACTGGG | 1 cut(s) | 683 |
| BpiI | GAAGAC | 1 cut(s) | 566 |
| BpmI | CTGGAG | 2 cut(s) | 764, 789 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 402 |
| Bpu14I | TTCGAA | 1 cut(s) | 98 |
| BpuMI | CCSGG | 4 cut(s) | 69, 340, 666, 786 |
| BsaI | GGTCTC | 1 cut(s) | 1042 |
| BsaJI | CCNNGG | 5 cut(s) | 7, 108, 315, 413, 1125 |
| BsaWI | WCCGGW | 1 cut(s) | 421 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 380, 410, 739, 762, 769, 792 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 345, 600, 694, 1036 |
| Bse118I | RCCGGY | 2 cut(s) | 236, 505 |
| Bse1I | ACTGG | 2 cut(s) | 689, 806 |
| Bse3DI | GCAATG | 3 cut(s) | 177, 293, 658 |
| BseBI | CCWGG | 2 cut(s) | 480, 595 |
| BseDI | CCNNGG | 5 cut(s) | 7, 108, 315, 413, 1125 |
| BseGI | GGATG | 5 cut(s) | 325, 715, 921, 925, 1090 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 345, 600, 694, 1036 |
| BseMI | GCAATG | 3 cut(s) | 177, 293, 658 |
| BseMII | CTCAG | 3 cut(s) | 416, 603, 1095 |
| BseNI | ACTGG | 2 cut(s) | 689, 806 |
| BseRI | GAGGAG | 3 cut(s) | 401, 955, 1111 |
| BseXI | GCAGC | 2 cut(s) | 610, 646 |
| Bsh1236I | CGCG | 2 cut(s) | 317, 573 |
| BshFI | GGCC | 5 cut(s) | 53, 215, 236, 842, 964 |
| BshNI | GGYRCC | 1 cut(s) | 311 |
| BsiHKAI | GWGCWC | 1 cut(s) | 64 |
| BsiSI | CCGG | 8 cut(s) | 42, 68, 237, 339, 422, 506, 665, 785 |
| BslFI | GGGAC | 3 cut(s) | 361, 372, 671 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 345, 600, 694, 1036 |
| BsmAI | GTCTC | 3 cut(s) | 697, 807, 1042 |
| BsmFI | GGGAC | 3 cut(s) | 361, 372, 671 |
| BsnI | GGCC | 5 cut(s) | 53, 215, 236, 842, 964 |
| Bso31I | GGTCTC | 1 cut(s) | 1042 |
| Bsp119I | TTCGAA | 1 cut(s) | 98 |
| Bsp1286I | GDGCHC | 1 cut(s) | 64 |
| Bsp143I | GATC | 3 cut(s) | 433, 517, 565 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 402 |
| Bsp19I | CCATGG | 2 cut(s) | 7, 1125 |
| Bsp68I | TCGCGA | 1 cut(s) | 573 |
| BspACI | CCGC | 9 cut(s) | 50, 88, 92, 315, 317, 383, 476, 601, 704 |
| BspANI | GGCC | 5 cut(s) | 53, 215, 236, 842, 964 |
| BspCNI | CTCAG | 3 cut(s) | 415, 604, 1096 |
| BspFNI | CGCG | 2 cut(s) | 317, 573 |
| BspLI | GGNNCC | 3 cut(s) | 313, 851, 965 |
| BspMAI | CTGCAG | 1 cut(s) | 636 |
| BspPI | GGATC | 3 cut(s) | 441, 512, 560 |
| BspQI | GCTCTTC | 1 cut(s) | 52 |
| BspT104I | TTCGAA | 1 cut(s) | 98 |
| BspT107I | GGYRCC | 1 cut(s) | 311 |
| BspTNI | GGTCTC | 1 cut(s) | 1042 |
| BsrDI | GCAATG | 3 cut(s) | 177, 293, 658 |
| BsrFI | RCCGGY | 2 cut(s) | 236, 505 |
| BsrI | ACTGG | 2 cut(s) | 689, 806 |
| BssAI | RCCGGY | 2 cut(s) | 236, 505 |
| BssECI | CCNNGG | 5 cut(s) | 7, 108, 315, 413, 1125 |
| BssMI | GATC | 3 cut(s) | 433, 517, 565 |
| BssT1I | CCWWGG | 3 cut(s) | 7, 413, 1125 |
| Bst2UI | CCWGG | 2 cut(s) | 480, 595 |
| Bst4CI | ACNGT | 1 cut(s) | 854 |
| Bst6I | CTCTTC | 3 cut(s) | 52, 930, 1088 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 643 |
| BstBI | TTCGAA | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 4 cut(s) | 90, 485, 507, 591 |
| BstDEI | CTNAG | 5 cut(s) | 202, 402, 612, 1104, 1115 |
| BstDSI | CCRYGG | 4 cut(s) | 7, 108, 315, 1125 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1034 |
| BstF5I | GGATG | 5 cut(s) | 325, 715, 921, 925, 1090 |
| BstFNI | CGCG | 2 cut(s) | 317, 573 |
| BstHHI | GCGC | 1 cut(s) | 115 |
| BstKTI | GATC | 3 cut(s) | 436, 520, 568 |
| BstMAI | GTCTC | 3 cut(s) | 697, 807, 1042 |
| BstMBI | GATC | 3 cut(s) | 433, 517, 565 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 59, 179, 233, 484, 595, 643, 893 |
| BstNI | CCWGG | 2 cut(s) | 480, 595 |
| BstSCI | CCNGG | 6 cut(s) | 67, 338, 478, 593, 664, 784 |
| BstSFI | CTRYAG | 1 cut(s) | 632 |
| BstUI | CGCG | 2 cut(s) | 317, 573 |
| BstV1I | GCAGC | 2 cut(s) | 610, 646 |
| BstV2I | GAAGAC | 1 cut(s) | 566 |
| BstX2I | RGATCY | 1 cut(s) | 565 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 14, 1059 |
| BstYI | RGATCY | 1 cut(s) | 565 |
| BsuRI | GGCC | 5 cut(s) | 53, 215, 236, 842, 964 |
| BtgI | CCRYGG | 4 cut(s) | 7, 108, 315, 1125 |
| BtgZI | GCGATG | 1 cut(s) | 60 |
| BtsCI | GGATG | 5 cut(s) | 325, 715, 921, 925, 1090 |
| BtsI | GCAGTG | 1 cut(s) | 903 |
| BtsIMutI | CAGTG | 1 cut(s) | 903 |
| BtuMI | TCGCGA | 1 cut(s) | 573 |
| Cac8I | GCNNGC | 4 cut(s) | 90, 485, 507, 591 |
| CfoI | GCGC | 1 cut(s) | 115 |
| Cfr10I | RCCGGY | 2 cut(s) | 236, 505 |
| Cfr13I | GGNCC | 2 cut(s) | 52, 963 |
| Cfr42I | CCGCGG | 1 cut(s) | 318 |
| Csp6I | GTAC | 1 cut(s) | 378 |
| CviAII | CATG | 2 cut(s) | 8, 1126 |
| CviQI | GTAC | 1 cut(s) | 378 |
| DdeI | CTNAG | 5 cut(s) | 202, 402, 612, 1104, 1115 |
| DpnI | GATC | 3 cut(s) | 435, 519, 567 |
| DpnII | GATC | 3 cut(s) | 433, 517, 565 |
| DraI | TTTAAA | 1 cut(s) | 978 |
| EaeI | YGGCCR | 3 cut(s) | 213, 234, 840 |
| Eam1104I | CTCTTC | 3 cut(s) | 52, 930, 1088 |
| EarI | CTCTTC | 3 cut(s) | 52, 930, 1088 |
| EciI | GGCGGA | 1 cut(s) | 465 |
| Eco130I | CCWWGG | 3 cut(s) | 7, 413, 1125 |
| Eco31I | GGTCTC | 1 cut(s) | 1042 |
| Eco57I | CTGAAG | 1 cut(s) | 846 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1034 |
| EcoO109I | RGGNCCY | 1 cut(s) | 963 |
| EcoRI | GAATTC | 1 cut(s) | 955 |
| EcoRII | CCWGG | 2 cut(s) | 478, 593 |
| EcoT14I | CCWWGG | 3 cut(s) | 7, 413, 1125 |
| ErhI | CCWWGG | 3 cut(s) | 7, 413, 1125 |
| FaeI | CATG | 2 cut(s) | 11, 1129 |
| FaiI | YATR | 7 cut(s) | 9, 121, 225, 372, 913, 1127, 1156 |
| FaqI | GGGAC | 3 cut(s) | 361, 372, 671 |
| FatI | CATG | 2 cut(s) | 7, 1125 |
| FauI | CCCGC | 1 cut(s) | 81 |
| Fnu4HI | GCNGC | 4 cut(s) | 51, 315, 599, 635 |
| FokI | GGATG | 5 cut(s) | 332, 722, 928, 932, 1097 |
| Fsp4HI | GCNGC | 4 cut(s) | 51, 315, 599, 635 |
| FspBI | CTAG | 2 cut(s) | 335, 414 |
| GlaI | GCGC | 1 cut(s) | 114 |
| GluI | GCNGC | 4 cut(s) | 51, 315, 599, 635 |
| GsuI | CTGGAG | 2 cut(s) | 764, 789 |
| HaeIII | GGCC | 5 cut(s) | 53, 215, 236, 842, 964 |
| HapII | CCGG | 8 cut(s) | 42, 68, 237, 339, 422, 506, 665, 785 |
| HhaI | GCGC | 1 cut(s) | 115 |
| Hin1II | CATG | 2 cut(s) | 11, 1129 |
| Hin6I | GCGC | 1 cut(s) | 113 |
| HinP1I | GCGC | 1 cut(s) | 113 |
| HindIII | AAGCTT | 1 cut(s) | 824 |
| HinfI | GANTC | 9 cut(s) | 38, 152, 164, 248, 290, 391, 628, 836, 1010 |
| HpaII | CCGG | 8 cut(s) | 42, 68, 237, 339, 422, 506, 665, 785 |
| HphI | GGTGA | 2 cut(s) | 439, 531 |
| Hpy188I | TCNGA | 7 cut(s) | 188, 438, 450, 832, 954, 986, 1018 |
| Hpy188III | TCNNGA | 1 cut(s) | 572 |
| Hpy99I | CGWCG | 1 cut(s) | 355 |
| HpyAV | CCTTC | 6 cut(s) | 94, 349, 424, 721, 772, 1030 |
| HpyCH4III | ACNGT | 1 cut(s) | 854 |
| HpyCH4V | TGCA | 4 cut(s) | 298, 634, 651, 736 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 59, 179, 233, 484, 595, 643, 893 |
| HpyF3I | CTNAG | 5 cut(s) | 202, 402, 612, 1104, 1115 |
| Hsp92II | CATG | 2 cut(s) | 11, 1129 |
| HspAI | GCGC | 1 cut(s) | 113 |
| KroI | GCCGGC | 1 cut(s) | 505 |
| KroNI | GCCGGC | 1 cut(s) | 507 |
| KspI | CCGCGG | 1 cut(s) | 318 |
| Kzo9I | GATC | 3 cut(s) | 433, 517, 565 |
| LguI | GCTCTTC | 1 cut(s) | 52 |
| LmnI | GCTCC | 2 cut(s) | 71, 478 |
| Lsp1109I | GCAGC | 2 cut(s) | 610, 646 |
| LweI | GCATC | 2 cut(s) | 37, 153 |
| MaeI | CTAG | 2 cut(s) | 335, 414 |
| MaeIII | GTNAC | 2 cut(s) | 197, 322 |
| MalI | GATC | 3 cut(s) | 435, 519, 567 |
| MboI | GATC | 3 cut(s) | 433, 517, 565 |
| MflI | RGATCY | 1 cut(s) | 565 |
| MhlI | GDGCHC | 1 cut(s) | 64 |
| MlsI | TGGCCA | 1 cut(s) | 215 |
| MluCI | AATT | 8 cut(s) | 217, 444, 496, 737, 955, 979, 998, 1057 |
| MluNI | TGGCCA | 1 cut(s) | 215 |
| MlyI | GAGTC | 4 cut(s) | 158, 161, 299, 637 |
| MmeI | TCCRAC | 1 cut(s) | 258 |
| Mox20I | TGGCCA | 1 cut(s) | 215 |
| MroNI | GCCGGC | 1 cut(s) | 505 |
| MscI | TGGCCA | 1 cut(s) | 215 |
| MseI | TTAA | 2 cut(s) | 443, 977 |
| MslI | CAYNNNNRTG | 2 cut(s) | 12, 544 |
| Msp20I | TGGCCA | 1 cut(s) | 215 |
| MspA1I | CMGCKG | 2 cut(s) | 317, 601 |
| MspI | CCGG | 8 cut(s) | 42, 68, 237, 339, 422, 506, 665, 785 |
| MspR9I | CCNGG | 6 cut(s) | 69, 340, 480, 595, 666, 786 |
| MvaI | CCWGG | 2 cut(s) | 480, 595 |
| MvnI | CGCG | 2 cut(s) | 317, 573 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 59, 179, 233, 484, 595, 643, 893 |
| NaeI | GCCGGC | 1 cut(s) | 507 |
| NciI | CCSGG | 4 cut(s) | 69, 340, 666, 786 |
| NcoI | CCATGG | 2 cut(s) | 7, 1125 |
| NdeII | GATC | 3 cut(s) | 433, 517, 565 |
| NgoMIV | GCCGGC | 1 cut(s) | 505 |
| NlaIII | CATG | 2 cut(s) | 11, 1129 |
| NlaIV | GGNNCC | 3 cut(s) | 313, 851, 965 |
| NmuCI | GTSAC | 1 cut(s) | 197 |
| NruI | TCGCGA | 1 cut(s) | 573 |
| NspV | TTCGAA | 1 cut(s) | 98 |
| OliI | CACNNNNGTG | 1 cut(s) | 544 |
| PciSI | GCTCTTC | 1 cut(s) | 52 |
| PdiI | GCCGGC | 1 cut(s) | 507 |
| PfeI | GAWTC | 5 cut(s) | 38, 248, 391, 836, 1010 |
| PkrI | GCNGC | 4 cut(s) | 52, 316, 600, 636 |
| PleI | GAGTC | 4 cut(s) | 158, 160, 298, 636 |
| PpsI | GAGTC | 4 cut(s) | 158, 160, 298, 636 |
| Psp6I | CCWGG | 2 cut(s) | 478, 593 |
| PspGI | CCWGG | 2 cut(s) | 478, 593 |
| PspN4I | GGNNCC | 3 cut(s) | 313, 851, 965 |
| PspPI | GGNCC | 2 cut(s) | 52, 963 |
| PstI | CTGCAG | 1 cut(s) | 636 |
| PsuI | RGATCY | 1 cut(s) | 565 |
| RruI | TCGCGA | 1 cut(s) | 573 |
| RsaI | GTAC | 1 cut(s) | 379 |
| RsaNI | GTAC | 1 cut(s) | 378 |
| RseI | CAYNNNNRTG | 2 cut(s) | 12, 544 |
| SacII | CCGCGG | 1 cut(s) | 318 |
| SapI | GCTCTTC | 1 cut(s) | 52 |
| SaqAI | TTAA | 2 cut(s) | 443, 977 |
| SatI | GCNGC | 4 cut(s) | 51, 315, 599, 635 |
| Sau3AI | GATC | 3 cut(s) | 433, 517, 565 |
| Sau96I | GGNCC | 2 cut(s) | 52, 963 |
| SchI | GAGTC | 4 cut(s) | 158, 161, 299, 637 |
| ScrFI | CCNGG | 6 cut(s) | 69, 340, 480, 595, 666, 786 |
| SduI | GDGCHC | 1 cut(s) | 64 |
| SfaNI | GCATC | 2 cut(s) | 37, 153 |
| SfcI | CTRYAG | 1 cut(s) | 632 |
| Sfr303I | CCGCGG | 1 cut(s) | 318 |
| SfuI | TTCGAA | 1 cut(s) | 98 |
| SgrBI | CCGCGG | 1 cut(s) | 318 |
| SmiI | ATTTAAAT | 1 cut(s) | 978 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 12, 544 |
| Sse9I | AATT | 8 cut(s) | 217, 444, 496, 737, 955, 979, 998, 1057 |
| SsiI | CCGC | 9 cut(s) | 50, 88, 92, 315, 317, 383, 476, 601, 704 |
| SspMI | CTAG | 2 cut(s) | 335, 414 |
| StyD4I | CCNGG | 6 cut(s) | 67, 338, 478, 593, 664, 784 |
| StyI | CCWWGG | 3 cut(s) | 7, 413, 1125 |
| SwaI | ATTTAAAT | 1 cut(s) | 978 |
| TaaI | ACNGT | 1 cut(s) | 854 |
| TaqI | TCGA | 1 cut(s) | 98 |
| TasI | AATT | 8 cut(s) | 217, 444, 496, 737, 955, 979, 998, 1057 |
| TauI | GCSGC | 2 cut(s) | 53, 317 |
| TfiI | GAWTC | 5 cut(s) | 38, 248, 391, 836, 1010 |
| Tru1I | TTAA | 2 cut(s) | 443, 977 |
| Tru9I | TTAA | 2 cut(s) | 443, 977 |
| TscAI | CASTG | 1 cut(s) | 903 |
| TseFI | GTSAC | 1 cut(s) | 197 |
| TseI | GCWGC | 2 cut(s) | 598, 634 |
| Tsp45I | GTSAC | 1 cut(s) | 197 |
| TspDTI | ATGAA | 5 cut(s) | 648, 849, 962, 1089, 1101 |
| TspGWI | ACGGA | 2 cut(s) | 185, 384 |
| TspRI | CASTG | 1 cut(s) | 903 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1034 |
| XapI | RAATTY | 3 cut(s) | 955, 979, 998 |
| XmaJI | CCTAGG | 1 cut(s) | 413 |
| XspI | CTAG | 2 cut(s) | 335, 414 |