Rorug03G0304300

Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
32263942 .. 32268579
4638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0304300.1

Sequence Viewer

Length: 2133 bp
ATGGACCTTCCAATGGGAAATGAAAATGAAAATGGTGGAGCCTCGGGTGATGAACAGGAAGCATCGAATTCTCGCAAGAGAGGGAAGACTTATCACCGCCACACCTCTCAGCAGATACAACATCTCGAAGCATTTTTCAAGAAATGCCCCCACCCGGACGACAACCAACGTCGTCAGTTGAGCAAGGAGTTACGGTTAGAGCCACAACAGATCAAGTTTTGGTTCCAAAACAAGAGGACTCAAACAAAGACTCAAACTGAGAGAGCAGACAACTCCACTCTTCGAGCGGAAAATAGTAGGATCCAGTGTGAGAACTATGCAATTAAAGAGGCTTTGAAGAATGTCATTTGTCCTGCTTGTGGAGGTCCTCCTTTTGGAGAGCAAGACCGGCAAAAGAGTTTGCAGAAACTTCACTTGGAGAATGCCCAATTGAAAGAAGAGCATGACAAAGTAGCCACCCTTCTTTCCAAGTTTATTGGGAAACCGCTATCTCAAATAGATTCGTTGACATATGCCGCTAGATCCTCGCTGGATGTATCACCAGGATTGTTAATAAACCAAGCAATGAGAAGTTCTGACCTTAGTCATGAATTTATTAATCCTACAATTAGTAACAATGCTGCGCTAGCTTATTACCAGGTAAATGCAATCCCTGAGACTGAAAAGACAGTCATGATAGAGACAGCGGCAAGTGCCATGGAAGAGTTAATTAGAATTTTGCGGATCAATGAGCCTATGTGGATCAAGTCCAACAGTGACGGGAGATATGTCCTTAACCATGAAAACTACGATAAGATGTTTCCAAGGGCTTATCGCTTAAAAACCTCCAGTGCTCGTATAGAGTCCTCAAAAGATTCAGGAATTGCGAGCATTAGTGCACTACAATTGGTTGACACATTTTTAGATGCAAATAAGTGGGTAGGCCTCTTTCCAACAATTGTGACGAAAGCTAAAACAATTGAAGTACTCCAAGCAGGAATGTTTGGGACCCAGAGTGGTTGCTTACAACTGATGTATGGGCAAATGCACATTCTTTCACCACTGGTGCTTCCACGAGATTTCTACTTTCTCCGCTTTTGTCAGCAAATCGAAGTTGGCACATGGGTGATTGTTGATGTCTCTTATGATTGCTTTAAAGAAAGTACTACTCAACGATCATGGAGGCTTCCTTCAGGATGCATGATTCAAGACATGCCAAATGGATGCTCTAAGGTAACTTGGGTTGAACACGTGGAAGTCGATGATAAGACACAAACTCATCGGCTCTATAGAGATCTTGTGTGTGGTATTGTCGCATATGGAGCACAAAGATGGATTGTTACTCTCCAGAGGATGTGTGAAAGATTTGGTTGCTCATTCGATGACGTTTCATCTAGTAGTGAATTTGGAGCAATGTTTGCTATGCCCGAAGGCAGAAGTAGCATAATGAAGCTTTCCCACAGGATGGTTAAGAACTTTTGTGGAATGTTGAGCATGTCAGGAAAGCTTGACTTCCCTCAACTATCAGAAGTGAATAATAGCGGGGTTCGAGTCAATGTTCGTAAAAGCATAGAACCAGGCGAGCCCAGTGGCATGGTCGTCGCTGCTGCTACTTCTCTATGGCTTCCTCTACATTCCCAAGACGTCTTTAACTTCTTCACAAATGAAAAAACAAGAGTGCAGTGGGATGTCCTCTCTAACGGAAATCCAATGAATGTGATTGCACACATTCCAACTGGAGCTCATCCAGGAAACTGTATTTCTATTATTCAGCCTTTTGTACCGACAGAGGGTAATATGCTTCTTTTGCAAGAAAGTTATATAGACACTTTGGGGTCTATGGTTATCTATGCTCCTGTCGAGGTAGCTACTATCAATATAGCAGTCGGGGGTGATGTTGACTCTTCTGACATTCCCATACTGCCCTCGGGGTTCGTAATCTCAGATGATGGTCGTCCTGATACTGGGACTTCGAGCAGCACAAACCCTGCCAGATCAGGTGGTTCACTCCTGACAGTGGCTTTCCAGATATTGGTTCCCTTCCCTTCACCTTCACAAGTGCTGAACGTTGAGTCCGTGGCAACTGTCAATACTCTTATTAGTTTGACTGTTCAAAAAATAAAAACTGCTCTCAATTGCGCTGGCTTGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

710

Amino Acids

78.9

Weight (kDa)

6.24

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 29 - 83 4.9e-17 Homeodomain
START PF01852 229 - 448 7.4e-30 START domain
PDF2_C PF25797 469 - 706 1.4e-101 PDF2-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000620)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03910 FvH4_4g13750 FvH4_6g21492 FvH4_6g21740 FvH4_6g24450
malus_domestica MD05G1336000.v1.1 MD05G1336100.v1.1 MD10G1212400.v1.1 MD10G1311600.v1.1
prunus_persica Prupe.4G112200_v2.0.a1 Prupe.4G130000_v2.0.a1 Prupe.4G130300_v2.0.a1 Prupe.4G219800_v2.0.a1 Prupe.4G219900_v2.0.a1 Prupe.4G220100_v2.0.a1
pyrus_communis pycom05g30760 pycom10g26280
rosa_chinensis RchiOBHm_Chr3g0478691 RchiOBHm_Chr3g0479021 RchiOBHm_Chr5g0004511 RchiOBHm_Chr5g0019881 RchiOBHm_Chr5g0021181
rosa_laevigata RLG00000023610 RLG00000023612 RLG00000031235 RLG00000032481 RLG00000032506 RLG00000032589 RLG00000032592
rosa_multiflora Rmu_co8446543.1_g000001 Rmu_sc0001396.1_g000010 Rmu_sc0002454.1_g000005 Rmu_sc0002531.1_g000072 Rmu_sc0002715.1_g000028 Rmu_sc0005207.1_g000008 Rmu_sc0005645.1_g000010 Rmu_sc0008074.1_g000017 Rmu_sc0012286.1_g000001 Rmu_ssc0000244.1_g000041
rosa_roxburghii Rroxscaffold_1G00039650 Rroxscaffold_1G00058030 Rroxscaffold_1G00058290 Rroxscaffold_1G00071010 Rroxscaffold_6G00402820 Rroxscaffold_6G00403180
rosa_rugosa Rorug03G0167000 Rorug03G0167100 Rorug03G0170200 Rorug03G0304300 Rorug05G0054800 Rorug05G0065000 Rorug05G0189900
rosa_samantha Rh3AG219300 Rh3AG221100 Rh3BG251000 Rh3BG253400 Rh3BG253800 Rh3CG247800 Rh3CG250000 Rh3DG244100 Rh3DG245900 Rh4AG008500 Rh4CG009200 Rh4CG009600 Rh5AG275400 Rh5BG144100 Rh5BG144400 Rh5BG144500 Rh5BG147400 Rh5BG280200 Rh5CG043100 Rh5CG155800 Rh5CG312400 Rh5DG143800 Rh5DG146700 Rh5DG288400
rosa_wichuraiana Rw3G019900 Rw5G012800 Rw5G013070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1626
AccB7I CCANNNNNTGG 2 cut(s) 1444, 2011
AccBSI CCGCTC 1 cut(s) 287
AciI CCGC 8 cut(s) 97, 287, 485, 516, 686, 721, 1072, 1521
AclI AACGTT 1 cut(s) 2046
AclWI GGATC 5 cut(s) 295, 308, 516, 731, 749
AcsI RAATTY 4 cut(s) 67, 590, 714, 1382
AcuI CTGAAG 1 cut(s) 1155
AcvI CACGTG 1 cut(s) 1231
AcyI GRCGYC 1 cut(s) 1623
AfaI GTAC 3 cut(s) 966, 1144, 1761
AfiI CCNNNNNNNGG 9 cut(s) 13, 154, 359, 374, 1444, 1769, 1943, 1996, 2011
AflIII ACRYGT 1 cut(s) 1228
AgsI TTSAA 7 cut(s) 139, 337, 433, 962, 1187, 1226, 2093
AjnI CCWGG 4 cut(s) 541, 636, 1555, 1726
AjuI GAANNNNNNNTTGG 2 cut(s) 398, 430
AleI CACNNNNGTG 1 cut(s) 1103
AloI GAACNNNNNNTCC 2 cut(s) 2036, 2068
AluBI AGCT 6 cut(s) 629, 950, 1432, 1486, 1721, 1847
AluI AGCT 6 cut(s) 629, 950, 1432, 1486, 1721, 1847
Alw21I GWGCWC 4 cut(s) 835, 880, 1306, 1723
Alw26I GTCTC 3 cut(s) 650, 674, 1123
Alw44I GTGCAC 1 cut(s) 876
AlwI GGATC 5 cut(s) 295, 308, 516, 731, 749
Ama87I CYCGRG 2 cut(s) 43, 1906
AoxI GGCC 1 cut(s) 922
ApaLI GTGCAC 1 cut(s) 876
ApeKI GCWGC 4 cut(s) 620, 1583, 1586, 1956
ApoI RAATTY 4 cut(s) 67, 590, 714, 1382
AseI ATTAAT 1 cut(s) 597
AspLEI GCGC 2 cut(s) 625, 2120
AspS9I GGNCC 3 cut(s) 4, 365, 987
AsuC2I CCSGG 1 cut(s) 155
AsuHPI GGTGA 7 cut(s) 59, 86, 531, 1029, 1117, 1883, 2019
AsuNHI GCTAGC 1 cut(s) 625
AvaI CYCGRG 2 cut(s) 43, 1906
AvaII GGWCC 3 cut(s) 4, 365, 987
BaeGI GKGCMC 1 cut(s) 880
BamHI GGATCC 1 cut(s) 300
BanII GRGCYC 2 cut(s) 1566, 1723
BarI GAAGNNNNNNTAC 2 cut(s) 444, 476
BauI CACGAG 1 cut(s) 1053
BbrPI CACGTG 1 cut(s) 1231
BbsI GAAGAC 1 cut(s) 92
Bbv12I GWGCWC 4 cut(s) 835, 880, 1306, 1723
BbvI GCAGC 4 cut(s) 607, 1570, 1573, 1968
BccI CCATC 3 cut(s) 1305, 1438, 1922
BcgI CGANNNNNNTGC 2 cut(s) 1561, 1595
BciT130I CCWGG 4 cut(s) 543, 638, 1557, 1728
BcnI CCSGG 1 cut(s) 155
BcoDI GTCTC 3 cut(s) 650, 674, 1123
BfaI CTAG 3 cut(s) 519, 626, 1374
BfmI CTRYAG 1 cut(s) 1267
BglII AGATCT 1 cut(s) 1273
BisI GCNGC 6 cut(s) 516, 621, 687, 1584, 1587, 1957
BlsI GCNGC 6 cut(s) 517, 622, 688, 1585, 1588, 1958
BmcAI AGTACT 2 cut(s) 966, 1144
Bme1390I CCNGG 5 cut(s) 155, 543, 638, 1557, 1728
Bme18I GGWCC 3 cut(s) 4, 365, 987
BmeT110I CYCGRG 2 cut(s) 43, 1906
BmgT120I GGNCC 3 cut(s) 4, 365, 987
BmiI GGNNCC 6 cut(s) 40, 224, 302, 988, 989, 2016
BmrFI CCNGG 5 cut(s) 155, 543, 638, 1557, 1728
BmrI ACTGGG 2 cut(s) 1560, 1953
BmsI GCATC 4 cut(s) 71, 895, 1166, 1193
BmtI GCTAGC 1 cut(s) 629
BmuI ACTGGG 2 cut(s) 1560, 1953
BoxI GACNNNNGTC 1 cut(s) 582
BpiI GAAGAC 1 cut(s) 92
BpmI CTGGAG 3 cut(s) 811, 1310, 1737
BpuMI CCSGG 1 cut(s) 155
BsaAI YACGTR 1 cut(s) 1231
BsaHI GRCGYC 1 cut(s) 1623
BsaJI CCNNGG 5 cut(s) 42, 696, 803, 1905, 2055
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 9 cut(s) 13, 154, 359, 374, 1444, 1769, 1943, 1996, 2011
Bse118I RCCGGY 1 cut(s) 387
Bse1I ACTGG 6 cut(s) 304, 828, 1047, 1566, 1720, 1948
Bse3DI GCAATG 2 cut(s) 570, 1398
BseBI CCWGG 4 cut(s) 543, 638, 1557, 1728
BseDI CCNNGG 5 cut(s) 42, 696, 803, 1905, 2055
BseGI GGATG 7 cut(s) 538, 1181, 1208, 1338, 1449, 1672, 1723
BseLI CCNNNNNNNGG 9 cut(s) 13, 154, 359, 374, 1444, 1769, 1943, 1996, 2011
BseMI GCAATG 2 cut(s) 570, 1398
BseMII CTCAG 4 cut(s) 122, 249, 645, 1935
BseNI ACTGG 6 cut(s) 304, 828, 1047, 1566, 1720, 1948
BseSI GKGCMC 1 cut(s) 880
BseXI GCAGC 4 cut(s) 607, 1570, 1573, 1968
BsgI GTGCAG 1 cut(s) 1679
BshFI GGCC 1 cut(s) 924
BsiHKAI GWGCWC 4 cut(s) 835, 880, 1306, 1723
BsiHKCI CYCGRG 2 cut(s) 43, 1906
BsiSI CCGG 2 cut(s) 155, 388
BslFI GGGAC 2 cut(s) 1000, 1960
BslI CCNNNNNNNGG 9 cut(s) 13, 154, 359, 374, 1444, 1769, 1943, 1996, 2011
BsmAI GTCTC 3 cut(s) 650, 674, 1123
BsmFI GGGAC 2 cut(s) 1000, 1960
BsmI GAATGC 1 cut(s) 427
BsnI GGCC 1 cut(s) 924
BsoBI CYCGRG 2 cut(s) 43, 1906
Bsp1286I GDGCHC 5 cut(s) 835, 880, 1306, 1566, 1723
Bsp143I GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
Bsp19I CCATGG 1 cut(s) 696
BspACI CCGC 8 cut(s) 97, 287, 485, 516, 686, 721, 1072, 1521
BspANI GGCC 1 cut(s) 924
BspCNI CTCAG 4 cut(s) 121, 250, 646, 1934
BspHI TCATGA 2 cut(s) 586, 672
BspLI GGNNCC 6 cut(s) 40, 224, 302, 988, 989, 2016
BspOI GCTAGC 1 cut(s) 629
BspPI GGATC 5 cut(s) 295, 308, 516, 731, 749
BspQI GCTCTTC 1 cut(s) 432
BsrBI CCGCTC 1 cut(s) 287
BsrDI GCAATG 2 cut(s) 570, 1398
BsrFI RCCGGY 1 cut(s) 387
BsrI ACTGG 6 cut(s) 304, 828, 1047, 1566, 1720, 1948
BssAI RCCGGY 1 cut(s) 387
BssECI CCNNGG 5 cut(s) 42, 696, 803, 1905, 2055
BssMI GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
BssNI GRCGYC 1 cut(s) 1623
BssSI CACGAG 1 cut(s) 1053
BssT1I CCWWGG 2 cut(s) 696, 803
Bst2BI CACGAG 1 cut(s) 1053
Bst2UI CCWGG 4 cut(s) 543, 638, 1557, 1728
Bst4CI ACNGT 7 cut(s) 195, 670, 755, 1736, 1996, 2065, 2089
Bst6I CTCTTC 4 cut(s) 285, 432, 696, 1888
BstACI GRCGYC 1 cut(s) 1623
BstAPI GCANNNNNTGC 1 cut(s) 1397
BstBAI YACGTR 1 cut(s) 1231
BstC8I GCNNGC 4 cut(s) 627, 868, 1562, 2122
BstDEI CTNAG 6 cut(s) 108, 258, 581, 654, 1209, 1921
BstDSI CCRYGG 2 cut(s) 696, 2055
BstF5I GGATG 7 cut(s) 538, 1181, 1208, 1338, 1449, 1672, 1723
BstHHI GCGC 2 cut(s) 625, 2120
BstKTI GATC 8 cut(s) 213, 303, 524, 726, 744, 1157, 1276, 1976
BstMAI GTCTC 3 cut(s) 650, 674, 1123
BstMBI GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
BstMWI GCNNNNNNNGC 7 cut(s) 388, 626, 692, 1301, 1397, 1419, 1786
BstNI CCWGG 4 cut(s) 543, 638, 1557, 1728
BstNSI RCATGY 2 cut(s) 1195, 1477
BstPAI GACNNNNGTC 1 cut(s) 582
BstSCI CCNGG 5 cut(s) 153, 541, 636, 1555, 1726
BstSFI CTRYAG 1 cut(s) 1267
BstSLI GKGCMC 1 cut(s) 880
BstV1I GCAGC 4 cut(s) 607, 1570, 1573, 1968
BstV2I GAAGAC 1 cut(s) 92
BstX2I RGATCY 3 cut(s) 300, 521, 1273
BstXI CCANNNNNNTGG 1 cut(s) 1573
BstYI RGATCY 3 cut(s) 300, 521, 1273
BsuRI GGCC 1 cut(s) 924
BtgI CCRYGG 2 cut(s) 696, 2055
BtsCI GGATG 7 cut(s) 538, 1181, 1208, 1338, 1449, 1672, 1723
BtsI GCAGTG 1 cut(s) 1667
BtsIMutI CAGTG 7 cut(s) 311, 760, 835, 1040, 1573, 1667, 2001
Cac8I GCNNGC 4 cut(s) 627, 868, 1562, 2122
CciI TCATGA 2 cut(s) 586, 672
CfoI GCGC 2 cut(s) 625, 2120
Cfr10I RCCGGY 1 cut(s) 387
Cfr13I GGNCC 3 cut(s) 4, 365, 987
CsiI ACCWGGT 1 cut(s) 636
Csp6I GTAC 3 cut(s) 965, 1143, 1760
CviQI GTAC 3 cut(s) 965, 1143, 1760
DdeI CTNAG 6 cut(s) 108, 258, 581, 654, 1209, 1921
DpnI GATC 8 cut(s) 212, 302, 523, 725, 743, 1156, 1275, 1975
DpnII GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
DraI TTTAAA 1 cut(s) 1135
Eam1104I CTCTTC 4 cut(s) 285, 432, 696, 1888
EarI CTCTTC 4 cut(s) 285, 432, 696, 1888
Ecl136II GAGCTC 1 cut(s) 1721
Eco130I CCWWGG 2 cut(s) 696, 803
Eco147I AGGCCT 1 cut(s) 924
Eco24I GRGCYC 2 cut(s) 1566, 1723
Eco47I GGWCC 3 cut(s) 4, 365, 987
Eco53kI GAGCTC 1 cut(s) 1721
Eco57I CTGAAG 1 cut(s) 1155
Eco72I CACGTG 1 cut(s) 1231
Eco88I CYCGRG 2 cut(s) 43, 1906
EcoICRI GAGCTC 1 cut(s) 1721
EcoO109I RGGNCCY 2 cut(s) 365, 987
EcoRI GAATTC 1 cut(s) 67
EcoRII CCWGG 4 cut(s) 541, 636, 1555, 1726
EcoT14I CCWWGG 2 cut(s) 696, 803
EcoT22I ATGCAT 1 cut(s) 1181
EcoT38I GRGCYC 2 cut(s) 1566, 1723
ErhI CCWWGG 2 cut(s) 696, 803
FalI AAGNNNNNCTT 2 cut(s) 1475, 1507
FaqI GGGAC 2 cut(s) 1000, 1960
FauI CCCGC 1 cut(s) 1514
FauNDI CATATG 2 cut(s) 511, 1297
Fnu4HI GCNGC 6 cut(s) 516, 621, 687, 1584, 1587, 1957
FokI GGATG 7 cut(s) 545, 1188, 1215, 1345, 1456, 1679, 1710
FriOI GRGCYC 2 cut(s) 1566, 1723
Fsp4HI GCNGC 6 cut(s) 516, 621, 687, 1584, 1587, 1957
FspBI CTAG 3 cut(s) 519, 626, 1374
GlaI GCGC 2 cut(s) 624, 2119
GluI GCNGC 6 cut(s) 516, 621, 687, 1584, 1587, 1957
GsuI CTGGAG 3 cut(s) 811, 1310, 1737
HaeIII GGCC 1 cut(s) 924
HapII CCGG 2 cut(s) 155, 388
HhaI GCGC 2 cut(s) 625, 2120
Hin1I GRCGYC 1 cut(s) 1623
Hin6I GCGC 2 cut(s) 623, 2118
HinP1I GCGC 2 cut(s) 623, 2118
HincII GTYRAC 3 cut(s) 507, 892, 1879
HindII GTYRAC 3 cut(s) 507, 892, 1879
HindIII AAGCTT 2 cut(s) 1430, 1484
HinfI GANTC 9 cut(s) 238, 250, 500, 842, 854, 1183, 1530, 1880, 2051
HpaII CCGG 2 cut(s) 155, 388
HphI GGTGA 7 cut(s) 59, 86, 531, 1029, 1117, 1883, 2019
Hpy166II GTNNAC 5 cut(s) 507, 878, 892, 1879, 1985
Hpy188I TCNGA 4 cut(s) 577, 1507, 1888, 1924
Hpy8I GTNNAC 5 cut(s) 507, 878, 892, 1879, 1985
Hpy99I CGWCG 2 cut(s) 174, 1583
HpyAV CCTTC 7 cut(s) 17, 470, 1179, 1403, 2029, 2034, 2040
HpyCH4III ACNGT 7 cut(s) 195, 670, 755, 1736, 1996, 2065, 2089
HpyCH4IV ACGT 5 cut(s) 169, 1230, 1365, 1623, 2046
HpyF10VI GCNNNNNNNGC 7 cut(s) 388, 626, 692, 1301, 1397, 1419, 1786
HpyF3I CTNAG 6 cut(s) 108, 258, 581, 654, 1209, 1921
HpySE526I ACGT 5 cut(s) 169, 1230, 1365, 1623, 2046
Hsp92I GRCGYC 1 cut(s) 1623
HspAI GCGC 2 cut(s) 623, 2118
KflI GGGWCCC 1 cut(s) 987
Kzo9I GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
LguI GCTCTTC 1 cut(s) 432
LmnI GCTCC 5 cut(s) 38, 1301, 1388, 1718, 1837
Lsp1109I GCAGC 4 cut(s) 607, 1570, 1573, 1968
LweI GCATC 4 cut(s) 71, 895, 1166, 1193
MabI ACCWGGT 1 cut(s) 636
MaeI CTAG 3 cut(s) 519, 626, 1374
MaeII ACGT 5 cut(s) 169, 1230, 1365, 1623, 2046
MaeIII GTNAC 6 cut(s) 189, 611, 755, 940, 1213, 1318
MalI GATC 8 cut(s) 212, 302, 523, 725, 743, 1156, 1275, 1975
MbiI CCGCTC 1 cut(s) 287
MboI GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
MboII GAAGA 7 cut(s) 97, 272, 349, 449, 713, 1627, 1875
MfeI CAATTG 5 cut(s) 428, 884, 936, 957, 2113
MflI RGATCY 3 cut(s) 300, 521, 1273
MhlI GDGCHC 5 cut(s) 835, 880, 1306, 1566, 1723
MlyI GAGTC 6 cut(s) 232, 244, 851, 1539, 1874, 2060
MmeI TCCRAC 3 cut(s) 774, 956, 1736
Mph1103I ATGCAT 1 cut(s) 1181
MslI CAYNNNNRTG 2 cut(s) 1103, 1309
MspA1I CMGCKG 1 cut(s) 686
MspI CCGG 2 cut(s) 155, 388
MspR9I CCNGG 5 cut(s) 155, 543, 638, 1557, 1728
MunI CAATTG 5 cut(s) 428, 884, 936, 957, 2113
Mva1269I GAATGC 1 cut(s) 427
MvaI CCWGG 4 cut(s) 543, 638, 1557, 1728
MwoI GCNNNNNNNGC 7 cut(s) 388, 626, 692, 1301, 1397, 1419, 1786
NciI CCSGG 1 cut(s) 155
NcoI CCATGG 1 cut(s) 696
NdeI CATATG 2 cut(s) 511, 1297
NdeII GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
NheI GCTAGC 1 cut(s) 625
NlaIV GGNNCC 6 cut(s) 40, 224, 302, 988, 989, 2016
NmuCI GTSAC 2 cut(s) 755, 940
NsiI ATGCAT 1 cut(s) 1181
NspI RCATGY 2 cut(s) 1195, 1477
OliI CACNNNNGTG 1 cut(s) 1103
PagI TCATGA 2 cut(s) 586, 672
PceI AGGCCT 1 cut(s) 924
PciSI GCTCTTC 1 cut(s) 432
PcsI WCGNNNNNNNCGW 2 cut(s) 1236, 2052
PctI GAATGC 1 cut(s) 427
PfeI GAWTC 3 cut(s) 500, 854, 1183
PflMI CCANNNNNTGG 2 cut(s) 1444, 2011
PfoI TCCNGGA 1 cut(s) 1726
PkrI GCNGC 6 cut(s) 517, 622, 688, 1585, 1588, 1958
PleI GAGTC 6 cut(s) 232, 244, 850, 1538, 1874, 2059
PmaCI CACGTG 1 cut(s) 1231
PmlI CACGTG 1 cut(s) 1231
PpsI GAGTC 6 cut(s) 232, 244, 850, 1538, 1874, 2059
Ppu21I YACGTR 1 cut(s) 1231
PpuMI RGGWCCY 2 cut(s) 365, 987
PshAI GACNNNNGTC 1 cut(s) 582
PshBI ATTAAT 1 cut(s) 597
Psp124BI GAGCTC 1 cut(s) 1723
Psp1406I AACGTT 1 cut(s) 2046
Psp5II RGGWCCY 2 cut(s) 365, 987
Psp6I CCWGG 4 cut(s) 541, 636, 1555, 1726
PspCI CACGTG 1 cut(s) 1231
PspGI CCWGG 4 cut(s) 541, 636, 1555, 1726
PspN4I GGNNCC 6 cut(s) 40, 224, 302, 988, 989, 2016
PspPI GGNCC 3 cut(s) 4, 365, 987
PspPPI RGGWCCY 2 cut(s) 365, 987
PsuI RGATCY 3 cut(s) 300, 521, 1273
RsaI GTAC 3 cut(s) 966, 1144, 1761
RsaNI GTAC 3 cut(s) 965, 1143, 1760
RseI CAYNNNNRTG 2 cut(s) 1103, 1309
SacI GAGCTC 1 cut(s) 1723
SapI GCTCTTC 1 cut(s) 432
SatI GCNGC 6 cut(s) 516, 621, 687, 1584, 1587, 1957
Sau3AI GATC 8 cut(s) 210, 300, 521, 723, 741, 1154, 1273, 1973
Sau96I GGNCC 3 cut(s) 4, 365, 987
ScaI AGTACT 2 cut(s) 966, 1144
SchI GAGTC 6 cut(s) 232, 244, 851, 1539, 1874, 2060
ScrFI CCNGG 5 cut(s) 155, 543, 638, 1557, 1728
SduI GDGCHC 5 cut(s) 835, 880, 1306, 1566, 1723
SexAI ACCWGGT 1 cut(s) 636
SfaNI GCATC 4 cut(s) 71, 895, 1166, 1193
SfcI CTRYAG 1 cut(s) 1267
SinI GGWCC 3 cut(s) 4, 365, 987
SmiMI CAYNNNNRTG 2 cut(s) 1103, 1309
SseBI AGGCCT 1 cut(s) 924
SsiI CCGC 8 cut(s) 97, 287, 485, 516, 686, 721, 1072, 1521
SspMI CTAG 3 cut(s) 519, 626, 1374
SstI GAGCTC 1 cut(s) 1723
StuI AGGCCT 1 cut(s) 924
StyD4I CCNGG 5 cut(s) 153, 541, 636, 1555, 1726
StyI CCWWGG 2 cut(s) 696, 803
TaaI ACNGT 7 cut(s) 195, 670, 755, 1736, 1996, 2065, 2089
TaiI ACGT 5 cut(s) 172, 1233, 1368, 1626, 2049
TaqI TCGA 9 cut(s) 65, 126, 283, 1089, 1239, 1359, 1528, 1839, 1952
TatI WGTACW 2 cut(s) 964, 1142
TauI GCSGC 2 cut(s) 518, 689
TfiI GAWTC 3 cut(s) 500, 854, 1183
TscAI CASTG 7 cut(s) 311, 760, 835, 1047, 1573, 1667, 2001
TseFI GTSAC 2 cut(s) 755, 940
TseI GCWGC 4 cut(s) 620, 1583, 1586, 1956
Tsp45I GTSAC 2 cut(s) 755, 940
TspDTI ATGAA 9 cut(s) 36, 42, 66, 603, 795, 1359, 1442, 1659, 1706
TspGWI ACGGA 2 cut(s) 1695, 2044
TspRI CASTG 7 cut(s) 311, 760, 835, 1047, 1573, 1667, 2001
Van91I CCANNNNNTGG 2 cut(s) 1444, 2011
VneI GTGCAC 1 cut(s) 876
VpaK11BI GGWCC 3 cut(s) 4, 365, 987
VspI ATTAAT 1 cut(s) 597
XapI RAATTY 4 cut(s) 67, 590, 714, 1382
XceI RCATGY 2 cut(s) 1195, 1477
XspI CTAG 3 cut(s) 519, 626, 1374
ZraI GACGTC 1 cut(s) 1624
ZrmI AGTACT 2 cut(s) 966, 1144
Zsp2I ATGCAT 1 cut(s) 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.