Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001396.1

Orthogroup ID

OG0000620

Physical Location & Seq

Genomic Coordinates Forward (+)

51158 .. 59630

Gene Structure 8473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001396.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

atgttggatactcctagtggtagaaattttcttctctggttgccccatgttggtgatatcaaaaattataactcatggcaaggtgggagcttgattgctgtcagctatgaggcccggagatgtggtgtgaaacgttccatgcgaggtgctgagtcaaagcaagtctgcccagagatccagctcgtccaactcccagcagcacgtggtaaagctgacctgaactcataccggaatgccggttcagaggtggtttccattttatcaaggaagggtcgatgtgagagggcttcaattgacgaagtgtatcttgaccttactgatgcagcagaaaccatgttagctgaagctcctccagaaagcttggaagcaattgaggaggaagctctcaagtcacatgttttgggactcgataatgaggacggcagtgaagccaaagaaaatgtgaggaaatggctttgcaaaaccaatgctgatcgtcatgataagctattagcttgtggggctctcatcgttgcagaacttaggttgctagtgttgaaggagacagaatttacttgttcagctggcattgctcataataagatgctggctaaacttgcaagtggtatgaataaacctgcacaacagactgttgtgccgttatcatctgtgaaaggattgctagagtccttgccaattaagaaaatgtgggtttttatttttcagatcgaggaaaagctacagcaacgctacggaatcaatactggtacctggttatggaatattgcaagggggataagtggggaagaagttgaggggcgccttcttccgaagagccatggttctgggaagacgtttcctggacctcaggctttgaagacgatttcttctgttcaacactggcttaatgaactttgtgaagatttgagtgaacgtcttcaattggacttggatgaaaataaacgtatcgctcatacactagtgctgcatgccaacgcatacaaggccagtgattcagattcacagaagaagtgcccttctaaatcttgtccccttaggtatggggctgccaagatacaagaagatgctcttaatctctttcaagctgcattacgtgaatacttgggtttcttcacaggcaaaatccaaggaagtcaaaataaccaatggggaataacatccctctctgtttcagcaagtaaaattgttcctataccatcggtatctgatgcagtacgagcgcttccttttgatatcatcactgagattttgagctggttgcctgtagattctttgctaaggttcaagtgtgtgtgcaaaaaatggcgttccttgcttctagactacaatttcattgcaaaacatatggttcgggcgagacctctgcaactttcctataaaaaagaatggatacctaacaaatatgatacggttctttatgatgaaaacttcaaacatatttcagatgtggctggcttgcttttggaggagagtcttacttctcgagttttccgaatcagaaactttgcaacgcatcaagtactttacttgcctgatgcacacgggaaatctaggtcagtgggttttgtttttgattcatccactggtgagtgtaaagccgcatgttttcattggaaacaggagggtgactctggctttgaagtagcctttgaagttctaagtatcggaaaggatgatcaatggaggactctgaagctgcccaagcaaaatggcgaaccgttcgtgggacgatattttacagcagctaaggaagaaggggccgctcatgtggtggaaattattagagatggacaagatttcaagctagaagttcaatctcttgatatatggagtgaacgtttcaccattgccactctgccccggggagctttcttagacttgaaaagagttgcaatttttctttggaattactatgtagctgttgctgatatagtagaggaatcccttaacgtcttggtgttggaagacttcaaggaaaacaaatggaggaagatcattgttcccttgaaattcttgaaggacaatccaggtttaaaagatgagatttgccctcaaggagtttggctaaatgacctccagttgcacaatgcagtgaaaaagaatattctcgtgtatgatatggaaaggaaggtgatcaaggcgacgcataccaagtctatggagaaaatatatgaattccgaaagccaagcctggttactctcaagggaatgaagaatgaatactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006282 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0010224 GO:0010225 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019985 GO:0031323 GO:0031974 GO:0031981 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070987 GO:0071704 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko01524 ko03460 map01524 map03460

Pfam Domains

Protein Families

IMS IMS_C

Protein Analysis

741

Amino Acids

83.66

Weight (kDa)

8.43

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000620)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03910 FvH4_4g13750 FvH4_6g21492 FvH4_6g21740 FvH4_6g24450
malus_domestica	MD05G1336000.v1.1 MD05G1336100.v1.1 MD10G1212400.v1.1 MD10G1311600.v1.1
prunus_persica	Prupe.4G112200_v2.0.a1 Prupe.4G130000_v2.0.a1 Prupe.4G130300_v2.0.a1 Prupe.4G219800_v2.0.a1 Prupe.4G219900_v2.0.a1 Prupe.4G220100_v2.0.a1
pyrus_communis	pycom05g30760 pycom10g26280
rosa_chinensis	RchiOBHm_Chr3g0478691 RchiOBHm_Chr3g0479021 RchiOBHm_Chr5g0004511 RchiOBHm_Chr5g0019881 RchiOBHm_Chr5g0021181
rosa_laevigata	RLG00000023610 RLG00000023612 RLG00000031235 RLG00000032481 RLG00000032506 RLG00000032589 RLG00000032592
rosa_multiflora	Rmu_co8446543.1_g000001 Rmu_sc0001396.1_g000010 Rmu_sc0002454.1_g000005 Rmu_sc0002531.1_g000072 Rmu_sc0002715.1_g000028 Rmu_sc0005207.1_g000008 Rmu_sc0005645.1_g000010 Rmu_sc0008074.1_g000017 Rmu_sc0012286.1_g000001 Rmu_ssc0000244.1_g000041
rosa_roxburghii	Rroxscaffold_1G00039650 Rroxscaffold_1G00058030 Rroxscaffold_1G00058290 Rroxscaffold_1G00071010 Rroxscaffold_6G00402820 Rroxscaffold_6G00403180
rosa_rugosa	Rorug03G0167000 Rorug03G0167100 Rorug03G0170200 Rorug03G0304300 Rorug05G0054800 Rorug05G0065000 Rorug05G0189900
rosa_samantha	Rh3AG219300 Rh3AG221100 Rh3BG251000 Rh3BG253400 Rh3BG253800 Rh3CG247800 Rh3CG250000 Rh3DG244100 Rh3DG245900 Rh4AG008500 Rh4CG009200 Rh4CG009600 Rh5AG275400 Rh5BG144100 Rh5BG144400 Rh5BG144500 Rh5BG147400 Rh5BG280200 Rh5CG043100 Rh5CG155800 Rh5CG312400 Rh5DG143800 Rh5DG146700 Rh5DG288400
rosa_wichuraiana	Rw3G019900 Rw5G012800 Rw5G013070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	69
Acc36I	ACCTGC	1 cut(s)	625
Acc65I	GGTACC	1 cut(s)	746
AccB1I	GGYRCC	2 cut(s)	746, 798
AccBSI	CCGCTC	1 cut(s)	1763
AciI	CCGC	2 cut(s)	1599, 1761
AclI	AACGTT	2 cut(s)	133, 1837
AclWI	GGATC	1 cut(s)	169
AcsI	RAATTY	4 cut(s)	25, 548, 2009, 2174
AcuI	CTGAAG	2 cut(s)	363, 1712
AcvI	CACGTG	1 cut(s)	203
AcyI	GRCGYC	1 cut(s)	799
AfaI	GTAC	3 cut(s)	748, 1215, 1521
AfeI	AGCGCT	1 cut(s)	1221
AfiI	CCNNNNNNNGG	3 cut(s)	50, 756, 1724
AflIII	ACRYGT	1 cut(s)	394
AhlI	ACTAGT	1 cut(s)	958
AjnI	CCWGG	4 cut(s)	749, 838, 2026, 2190
AloI	GAACNNNNNNTCC	2 cut(s)	223, 255
Alw26I	GTCTC	2 cut(s)	536, 1351
AlwI	GGATC	1 cut(s)	169
Ama87I	CYCGRG	2 cut(s)	1482, 1860
Aor51HI	AGCGCT	1 cut(s)	1221
AoxI	GGCC	3 cut(s)	111, 984, 1758
ApeKI	GCWGC	7 cut(s)	197, 323, 964, 1046, 1085, 1696, 1742
ApoI	RAATTY	4 cut(s)	25, 548, 2009, 2174
ArsI	GACNNNNNNTTYG	2 cut(s)	1619, 1651
Asp700I	GAANNNNTTC	1 cut(s)	915
Asp718I	GGTACC	1 cut(s)	746
AspLEI	GCGC	2 cut(s)	801, 1222
AspS9I	GGNCC	3 cut(s)	112, 842, 1758
AsuC2I	CCSGG	3 cut(s)	115, 1861, 1862
AsuHPI	GGTGA	5 cut(s)	65, 1598, 1637, 1834, 2143
AvaI	CYCGRG	2 cut(s)	1482, 1860
AvaII	GGWCC	1 cut(s)	842
AxyI	CCTNAGG	2 cut(s)	846, 1034
BaeGI	GKGCMC	1 cut(s)	1016
BanI	GGYRCC	2 cut(s)	746, 798
BanII	GRGCYC	1 cut(s)	505
BarI	GAAGNNNNNNTAC	3 cut(s)	1206, 1238, 2204
BauI	CACGAG	1 cut(s)	2108
BbrPI	CACGTG	1 cut(s)	203
BbsI	GAAGAC	4 cut(s)	836, 863, 908, 1971
BbvI	GCAGC	7 cut(s)	209, 335, 951, 1033, 1072, 1683, 1754
BccI	CCATC	2 cut(s)	1204, 1781
BceAI	ACGGC	2 cut(s)	436, 622
BcgI	CGANNNNNNTGC	2 cut(s)	1345, 1379
BciT130I	CCWGG	4 cut(s)	751, 840, 2028, 2192
BciVI	GTATCC	1 cut(s)	1383
BclI	TGATCA	2 cut(s)	1675, 2133
BcnI	CCSGG	3 cut(s)	115, 1861, 1862
BcoDI	GTCTC	2 cut(s)	536, 1351
BcuI	ACTAGT	1 cut(s)	958
BfaI	CTAG	7 cut(s)	15, 530, 662, 959, 1319, 1551, 1805
BfmI	CTRYAG	2 cut(s)	719, 1263
BfoI	RGCGCY	2 cut(s)	802, 1223
BfuAI	ACCTGC	1 cut(s)	625
BfuI	GTATCC	1 cut(s)	1383
BisI	GCNGC	9 cut(s)	198, 324, 965, 1047, 1086, 1599, 1697, 1743, 1761
BlsI	GCNGC	9 cut(s)	199, 325, 966, 1048, 1087, 1600, 1698, 1744, 1762
BmcAI	AGTACT	1 cut(s)	1521
Bme1390I	CCNGG	7 cut(s)	115, 751, 840, 1861, 1862, 2028, 2192
Bme18I	GGWCC	1 cut(s)	842
BmeT110I	CYCGRG	2 cut(s)	1482, 1860
BmgT120I	GGNCC	3 cut(s)	112, 842, 1758
BmiI	GGNNCC	3 cut(s)	748, 800, 1759
BmrFI	CCNGG	7 cut(s)	115, 751, 840, 1861, 1862, 2028, 2192
BmsI	GCATC	6 cut(s)	310, 573, 1054, 1198, 1522, 1525
BpiI	GAAGAC	4 cut(s)	836, 863, 908, 1971
BplI	GAGNNNNNCTC	2 cut(s)	1613, 1645
BpmI	CTGGAG	2 cut(s)	336, 2060
Bpu10I	CCTNAGC	2 cut(s)	1277, 1746
BpuEI	CTTGAG	3 cut(s)	371, 2037, 2186
BpuMI	CCSGG	3 cut(s)	115, 1861, 1862
BsaAI	YACGTR	2 cut(s)	203, 1094
BsaHI	GRCGYC	1 cut(s)	799
BsaI	GGTCTC	1 cut(s)	1351
BsaJI	CCNNGG	5 cut(s)	817, 1126, 1859, 1860, 1861
BsaWI	WCCGGW	1 cut(s)	228
BsaXI	ACNNNNNCTCC	4 cut(s)	109, 139, 1822, 1852
Bsc4I	CCNNNNNNNGG	3 cut(s)	50, 756, 1724
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	5 cut(s)	748, 884, 987, 1588, 2077
Bse21I	CCTNAGG	2 cut(s)	846, 1034
Bse3DI	GCAATG	3 cut(s)	567, 1332, 1845
BseBI	CCWGG	4 cut(s)	751, 840, 2028, 2192
BseDI	CCNNGG	5 cut(s)	817, 1126, 1859, 1860, 1861
BseGI	GGATG	4 cut(s)	937, 1157, 1577, 1678
BseLI	CCNNNNNNNGG	3 cut(s)	50, 756, 1724
BseMI	GCAATG	3 cut(s)	567, 1332, 1845
BseMII	CTCAG	3 cut(s)	141, 860, 1233
BseNI	ACTGG	5 cut(s)	748, 884, 987, 1588, 2077
BseRI	GAGGAG	3 cut(s)	339, 389, 1481
BseSI	GKGCMC	1 cut(s)	1016
BseXI	GCAGC	7 cut(s)	209, 335, 951, 1033, 1072, 1683, 1754
BseYI	CCCAGC	1 cut(s)	193
BsgI	GTGCAG	1 cut(s)	603
BshFI	GGCC	3 cut(s)	113, 986, 1760
BshNI	GGYRCC	2 cut(s)	746, 798
BsiHKCI	CYCGRG	2 cut(s)	1482, 1860
BsiSI	CCGG	4 cut(s)	115, 229, 237, 1861
BslFI	GGGAC	3 cut(s)	417, 1014, 1740
BslI	CCNNNNNNNGG	3 cut(s)	50, 756, 1724
BsmAI	GTCTC	2 cut(s)	536, 1351
BsmFI	GGGAC	3 cut(s)	417, 1014, 1740
BsmI	GAATGC	1 cut(s)	238
BsnI	GGCC	3 cut(s)	113, 986, 1760
Bso31I	GGTCTC	1 cut(s)	1351
BsoBI	CYCGRG	2 cut(s)	1482, 1860
Bsp1286I	GDGCHC	2 cut(s)	505, 1016
Bsp143I	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
Bsp19I	CCATGG	1 cut(s)	817
BspACI	CCGC	2 cut(s)	1599, 1761
BspANI	GGCC	3 cut(s)	113, 986, 1760
BspCNI	CTCAG	3 cut(s)	142, 859, 1234
BspHI	TCATGA	1 cut(s)	478
BspLI	GGNNCC	3 cut(s)	748, 800, 1759
BspMI	ACCTGC	1 cut(s)	625
BspPI	GGATC	1 cut(s)	169
BspQI	GCTCTTC	1 cut(s)	806
BspT107I	GGYRCC	2 cut(s)	746, 798
BspTNI	GGTCTC	1 cut(s)	1351
BsrBI	CCGCTC	1 cut(s)	1763
BsrDI	GCAATG	3 cut(s)	567, 1332, 1845
BsrFI	RCCGGY	1 cut(s)	236
BsrI	ACTGG	5 cut(s)	748, 884, 987, 1588, 2077
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	5 cut(s)	817, 1126, 1859, 1860, 1861
BssMI	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
BssNI	GRCGYC	1 cut(s)	799
BssSI	CACGAG	1 cut(s)	2108
BssT1I	CCWWGG	2 cut(s)	817, 1126
Bst2BI	CACGAG	1 cut(s)	2108
Bst2UI	CCWGG	4 cut(s)	751, 840, 2028, 2192
Bst4CI	ACNGT	3 cut(s)	631, 1411, 1719
Bst6I	CTCTTC	1 cut(s)	806
BstACI	GRCGYC	1 cut(s)	799
BstBAI	YACGTR	2 cut(s)	203, 1094
BstC8I	GCNNGC	5 cut(s)	565, 588, 969, 1453, 1457
BstDEI	CTNAG	9 cut(s)	150, 521, 846, 1034, 1242, 1277, 1658, 1746, 1873
BstDSI	CCRYGG	1 cut(s)	817
BstF5I	GGATG	4 cut(s)	937, 1157, 1577, 1678
BstH2I	RGCGCY	2 cut(s)	802, 1223
BstHHI	GCGC	2 cut(s)	801, 1222
BstKTI	GATC	6 cut(s)	177, 475, 708, 1678, 1995, 2136
BstMAI	GTCTC	2 cut(s)	536, 1351
BstMBI	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
BstMWI	GCNNNNNNNGC	7 cut(s)	500, 569, 596, 983, 1217, 1312, 1702
BstNI	CCWGG	4 cut(s)	751, 840, 2028, 2192
BstNSI	RCATGY	3 cut(s)	398, 971, 1605
BstSCI	CCNGG	7 cut(s)	113, 749, 838, 1859, 1860, 2026, 2190
BstSFI	CTRYAG	2 cut(s)	719, 1263
BstSLI	GKGCMC	1 cut(s)	1016
BstV1I	GCAGC	7 cut(s)	209, 335, 951, 1033, 1072, 1683, 1754
BstV2I	GAAGAC	4 cut(s)	836, 863, 908, 1971
BstX2I	RGATCY	1 cut(s)	174
BstXI	CCANNNNNNTGG	2 cut(s)	824, 2158
BstYI	RGATCY	1 cut(s)	174
Bsu36I	CCTNAGG	2 cut(s)	846, 1034
BsuI	GTATCC	1 cut(s)	1383
BsuRI	GGCC	3 cut(s)	113, 986, 1760
BtgI	CCRYGG	1 cut(s)	817
BtsCI	GGATG	4 cut(s)	937, 1157, 1577, 1678
BtsI	GCAGTG	2 cut(s)	430, 2097
BtsIMutI	CAGTG	7 cut(s)	430, 877, 994, 1239, 1563, 1581, 2097
BveI	ACCTGC	1 cut(s)	625
Cac8I	GCNNGC	5 cut(s)	565, 588, 969, 1453, 1457
CciI	TCATGA	1 cut(s)	478
CfoI	GCGC	2 cut(s)	801, 1222
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	3 cut(s)	112, 842, 1758
Cfr9I	CCCGGG	1 cut(s)	1860
CseI	GACGC	1 cut(s)	2152
CsiI	ACCWGGT	1 cut(s)	749
Csp6I	GTAC	3 cut(s)	747, 1214, 1520
CviQI	GTAC	3 cut(s)	747, 1214, 1520
DdeI	CTNAG	9 cut(s)	150, 521, 846, 1034, 1242, 1277, 1658, 1746, 1873
DinI	GGCGCC	1 cut(s)	800
DpnI	GATC	6 cut(s)	176, 474, 707, 1677, 1994, 2135
DpnII	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
DraI	TTTAAA	1 cut(s)	2034
Eam1104I	CTCTTC	1 cut(s)	806
EarI	CTCTTC	1 cut(s)	806
Eco130I	CCWWGG	2 cut(s)	817, 1126
Eco24I	GRGCYC	1 cut(s)	505
Eco31I	GGTCTC	1 cut(s)	1351
Eco32I	GATATC	2 cut(s)	58, 1234
Eco47I	GGWCC	1 cut(s)	842
Eco47III	AGCGCT	1 cut(s)	1221
Eco57I	CTGAAG	2 cut(s)	363, 1712
Eco72I	CACGTG	1 cut(s)	203
Eco81I	CCTNAGG	2 cut(s)	846, 1034
Eco88I	CYCGRG	2 cut(s)	1482, 1860
EcoRI	GAATTC	1 cut(s)	2174
EcoRII	CCWGG	4 cut(s)	749, 838, 2026, 2190
EcoRV	GATATC	2 cut(s)	58, 1234
EcoT14I	CCWWGG	2 cut(s)	817, 1126
EcoT38I	GRGCYC	1 cut(s)	505
EgeI	GGCGCC	1 cut(s)	800
EheI	GGCGCC	1 cut(s)	800
ErhI	CCWWGG	2 cut(s)	817, 1126
FalI	AAGNNNNNCTT	4 cut(s)	291, 323, 1053, 1085
FaqI	GGGAC	3 cut(s)	417, 1014, 1740
FauNDI	CATATG	1 cut(s)	1344
FbaI	TGATCA	2 cut(s)	1675, 2133
Fnu4HI	GCNGC	9 cut(s)	198, 324, 965, 1047, 1086, 1599, 1697, 1743, 1761
FokI	GGATG	4 cut(s)	944, 1144, 1564, 1685
FriOI	GRGCYC	1 cut(s)	505
Fsp4HI	GCNGC	9 cut(s)	198, 324, 965, 1047, 1086, 1599, 1697, 1743, 1761
FspBI	CTAG	7 cut(s)	15, 530, 662, 959, 1319, 1551, 1805
GlaI	GCGC	2 cut(s)	800, 1221
GluI	GCNGC	9 cut(s)	198, 324, 965, 1047, 1086, 1599, 1697, 1743, 1761
GsaI	CCCAGC	1 cut(s)	197
GsuI	CTGGAG	2 cut(s)	336, 2060
HaeII	RGCGCY	2 cut(s)	802, 1223
HaeIII	GGCC	3 cut(s)	113, 986, 1760
HapII	CCGG	4 cut(s)	115, 229, 237, 1861
HgaI	GACGC	1 cut(s)	2152
HhaI	GCGC	2 cut(s)	801, 1222
Hin1I	GRCGYC	1 cut(s)	799
Hin6I	GCGC	2 cut(s)	799, 1220
HinP1I	GCGC	2 cut(s)	799, 1220
HindIII	AAGCTT	1 cut(s)	358
HpaII	CCGG	4 cut(s)	115, 229, 237, 1861
HphI	GGTGA	5 cut(s)	65, 1598, 1637, 1834, 2143
Hpy166II	GTNNAC	2 cut(s)	911, 1835
Hpy188III	TCNNGA	7 cut(s)	308, 353, 479, 1319, 1482, 1820, 2014
Hpy8I	GTNNAC	2 cut(s)	911, 1835
Hpy99I	CGWCG	1 cut(s)	2146
HpyAV	CCTTC	7 cut(s)	262, 532, 812, 1026, 1748, 2011, 2122
HpyCH4III	ACNGT	3 cut(s)	631, 1411, 1719
HpyCH4IV	ACGT	8 cut(s)	133, 202, 833, 913, 943, 1093, 1837, 1950
HpyF10VI	GCNNNNNNNGC	7 cut(s)	500, 569, 596, 983, 1217, 1312, 1702
HpyF3I	CTNAG	9 cut(s)	150, 521, 846, 1034, 1242, 1277, 1658, 1746, 1873
HpySE526I	ACGT	8 cut(s)	133, 202, 833, 913, 943, 1093, 1837, 1950
Hsp92I	GRCGYC	1 cut(s)	799
HspAI	GCGC	2 cut(s)	799, 1220
KasI	GGCGCC	1 cut(s)	798
KpnI	GGTACC	1 cut(s)	750
Ksp22I	TGATCA	2 cut(s)	1675, 2133
Kzo9I	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
LguI	GCTCTTC	1 cut(s)	806
LmnI	GCTCC	3 cut(s)	87, 352, 1865
Lsp1109I	GCAGC	7 cut(s)	209, 335, 951, 1033, 1072, 1683, 1754
LweI	GCATC	6 cut(s)	310, 573, 1054, 1198, 1522, 1525
MabI	ACCWGGT	1 cut(s)	749
MaeI	CTAG	7 cut(s)	15, 530, 662, 959, 1319, 1551, 1805
MaeII	ACGT	8 cut(s)	133, 202, 833, 913, 943, 1093, 1837, 1950
MaeIII	GTNAC	3 cut(s)	390, 1625, 2194
MalI	GATC	6 cut(s)	176, 474, 707, 1677, 1994, 2135
MbiI	CCGCTC	1 cut(s)	1763
MboI	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
MfeI	CAATTG	3 cut(s)	291, 369, 920
MflI	RGATCY	1 cut(s)	174
MhlI	GDGCHC	2 cut(s)	505, 1016
Mly113I	GGCGCC	1 cut(s)	799
MlyI	GAGTC	6 cut(s)	161, 399, 674, 1480, 1622, 1681
MmeI	TCCRAC	2 cut(s)	211, 1941
MroXI	GAANNNNTTC	1 cut(s)	915
MseI	TTAA	5 cut(s)	678, 885, 1071, 1947, 2033
MslI	CAYNNNNRTG	1 cut(s)	51
MspA1I	CMGCKG	1 cut(s)	563
MspI	CCGG	4 cut(s)	115, 229, 237, 1861
MspR9I	CCNGG	7 cut(s)	115, 751, 840, 1861, 1862, 2028, 2192
MunI	CAATTG	3 cut(s)	291, 369, 920
Mva1269I	GAATGC	1 cut(s)	238
MvaI	CCWGG	4 cut(s)	751, 840, 2028, 2192
MwoI	GCNNNNNNNGC	7 cut(s)	500, 569, 596, 983, 1217, 1312, 1702
NarI	GGCGCC	1 cut(s)	799
NciI	CCSGG	3 cut(s)	115, 1861, 1862
NcoI	CCATGG	1 cut(s)	817
NdeI	CATATG	1 cut(s)	1344
NdeII	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
NlaIV	GGNNCC	3 cut(s)	748, 800, 1759
NmuCI	GTSAC	2 cut(s)	390, 1625
NspI	RCATGY	3 cut(s)	398, 971, 1605
PaeI	GCATGC	1 cut(s)	971
PaeR7I	CTCGAG	1 cut(s)	1482
PagI	TCATGA	1 cut(s)	478
PciI	ACATGT	1 cut(s)	394
PciSI	GCTCTTC	1 cut(s)	806
PcsI	WCGNNNNNNNCGW	2 cut(s)	139, 1489
PctI	GAATGC	1 cut(s)	238
PdmI	GAANNNNTTC	1 cut(s)	915
PfeI	GAWTC	7 cut(s)	735, 992, 998, 1268, 1494, 1574, 1940
PfoI	TCCNGGA	1 cut(s)	838
PkrI	GCNGC	9 cut(s)	199, 325, 966, 1048, 1087, 1600, 1698, 1744, 1762
PleI	GAGTC	6 cut(s)	160, 399, 673, 1479, 1622, 1681
PluTI	GGCGCC	1 cut(s)	802
PmaCI	CACGTG	1 cut(s)	203
PmlI	CACGTG	1 cut(s)	203
PpsI	GAGTC	6 cut(s)	160, 399, 673, 1479, 1622, 1681
Ppu21I	YACGTR	2 cut(s)	203, 1094
PscI	ACATGT	1 cut(s)	394
PsiI	TTATAA	1 cut(s)	69
Psp1406I	AACGTT	2 cut(s)	133, 1837
Psp6I	CCWGG	4 cut(s)	749, 838, 2026, 2190
PspCI	CACGTG	1 cut(s)	203
PspFI	CCCAGC	1 cut(s)	193
PspGI	CCWGG	4 cut(s)	749, 838, 2026, 2190
PspN4I	GGNNCC	3 cut(s)	748, 800, 1759
PspPI	GGNCC	3 cut(s)	112, 842, 1758
PsuI	RGATCY	1 cut(s)	174
PvuII	CAGCTG	1 cut(s)	563
RsaI	GTAC	3 cut(s)	748, 1215, 1521
RsaNI	GTAC	3 cut(s)	747, 1214, 1520
RseI	CAYNNNNRTG	1 cut(s)	51
SapI	GCTCTTC	1 cut(s)	806
SaqAI	TTAA	5 cut(s)	678, 885, 1071, 1947, 2033
SatI	GCNGC	9 cut(s)	198, 324, 965, 1047, 1086, 1599, 1697, 1743, 1761
Sau3AI	GATC	6 cut(s)	174, 472, 705, 1675, 1992, 2133
Sau96I	GGNCC	3 cut(s)	112, 842, 1758
ScaI	AGTACT	1 cut(s)	1521
SchI	GAGTC	6 cut(s)	161, 399, 674, 1480, 1622, 1681
ScrFI	CCNGG	7 cut(s)	115, 751, 840, 1861, 1862, 2028, 2192
SduI	GDGCHC	2 cut(s)	505, 1016
SexAI	ACCWGGT	1 cut(s)	749
SfaNI	GCATC	6 cut(s)	310, 573, 1054, 1198, 1522, 1525
SfcI	CTRYAG	2 cut(s)	719, 1263
SfoI	GGCGCC	1 cut(s)	800
Sfr274I	CTCGAG	1 cut(s)	1482
SinI	GGWCC	1 cut(s)	842
SlaI	CTCGAG	1 cut(s)	1482
SmaI	CCCGGG	1 cut(s)	1862
SmiMI	CAYNNNNRTG	1 cut(s)	51
SmlI	CTYRAG	4 cut(s)	386, 1482, 2052, 2201
SmoI	CTYRAG	4 cut(s)	386, 1482, 2052, 2201
SpeI	ACTAGT	1 cut(s)	958
SphI	GCATGC	1 cut(s)	971
SsiI	CCGC	2 cut(s)	1599, 1761
SspDI	GGCGCC	1 cut(s)	798
SspI	AATATT	2 cut(s)	763, 2104
SspMI	CTAG	7 cut(s)	15, 530, 662, 959, 1319, 1551, 1805
StyD4I	CCNGG	7 cut(s)	113, 749, 838, 1859, 1860, 2026, 2190
StyI	CCWWGG	2 cut(s)	817, 1126
TaaI	ACNGT	3 cut(s)	631, 1411, 1719
TaiI	ACGT	8 cut(s)	136, 205, 836, 916, 946, 1096, 1840, 1953
TaqI	TCGA	4 cut(s)	274, 408, 708, 1483
TatI	WGTACW	1 cut(s)	1519
TauI	GCSGC	2 cut(s)	1601, 1763
TfiI	GAWTC	7 cut(s)	735, 992, 998, 1268, 1494, 1574, 1940
Tru1I	TTAA	5 cut(s)	678, 885, 1071, 1947, 2033
Tru9I	TTAA	5 cut(s)	678, 885, 1071, 1947, 2033
TscAI	CASTG	7 cut(s)	430, 884, 994, 1246, 1563, 1588, 2097
TseFI	GTSAC	2 cut(s)	390, 1625
TseI	GCWGC	7 cut(s)	197, 323, 964, 1046, 1085, 1696, 1742
Tsp45I	GTSAC	2 cut(s)	390, 1625
TspDTI	ATGAA	9 cut(s)	623, 903, 948, 1321, 1437, 1566, 1598, 2187, 2225
TspGWI	ACGGA	1 cut(s)	747
TspMI	CCCGGG	1 cut(s)	1860
TspRI	CASTG	7 cut(s)	430, 884, 994, 1246, 1563, 1588, 2097
VpaK11BI	GGWCC	1 cut(s)	842
XapI	RAATTY	4 cut(s)	25, 548, 2009, 2174
XbaI	TCTAGA	1 cut(s)	1318
XceI	RCATGY	3 cut(s)	398, 971, 1605
XhoI	CTCGAG	1 cut(s)	1482
XmaI	CCCGGG	1 cut(s)	1860
XmnI	GAANNNNTTC	1 cut(s)	915
XspI	CTAG	7 cut(s)	15, 530, 662, 959, 1319, 1551, 1805
ZrmI	AGTACT	1 cut(s)	1521

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.