Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0001779

Physical Location & Seq

Genomic Coordinates Forward (+)

63886982 .. 63890713

Gene Structure 3732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG367700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGAAGAAGTACTTGGAGAACAAGCATCAAGAACAAAGAGCACAAAGCCTTTGTTTGGCAACACATGCTTCTGCTTCTCAAGAGACCATCGACCACATCCATGTGGGTTCATTCTATGAACTAGACCATTTAAAGCTTCCTGCTACTGCCTCAGAAGAGATGAAGTCGATTCGGGTCGTCATGGTTAATGGAAAGTCTCTGTTCAAGGTTTCAGTGAGGTTTCCAAGCCTTCACTCTCTCCAAACCCATCTGAATGAGGAAAGCTACCAAAACCCAGACGGCTTCCTTCCTGCTTTCGACGAAAACTACTCTATGGCTCTACAAATCGCGTCGGAGGTGCTTTACCGGAGAATCCCACATCACGAAATAGCAGAGCAGAGCATGATGTGGAGTTTTTGGGCCGGACGGCGTCGTTTCGCTACCCGGAAAAGCCCATCTCCGTGTTGCTTGTCGGAGATTAAGCTCGGCGGCATGGTCCAATGGGGTAAGCGCAAACTAGTCCGGTGCGTTACGAGGCATGAGAGTCTGTCGAGCTCTGACCAAGAACAACCAGAGAAGGAAGAAACGGAGATGGATGAAGATGTGAAAGAGCCTCGCTATGAGTTTAGGAAGAGAAAACTGGTTCAAAAGAAGACCAAAGCAGCGACGCGTCGGAAGCAGAACAATCAAATAGTGGTTCATGACCGGACCCAAAATCAATTGGTTGAAGCCTCAATAGAGAGATGGACTGCAAGGAGGTATAAGGCAGCAGAGGAGAACATACTTAAGGTGATGAAGGCAAAAGGTGTTTGTGCTGAGAATCCAATACGGAGAGCACCACTGAGGTGTGAGGCCCGGAAGTTGATTGGGGACACTGGTTTGATAGACCATTTGTTGAAGCATATGGCTGGGAAGGTAGCTCCGGGTGGCGCTGATCGGTTTCGGAGAAGGCATAATGCTGATGGAGCACTTGTGTATTGGCTGGAGAGTGCTGATTTAATGAGTGTAAGGAAGGAGGCTGGGGTTGAGGATCCTTATTGGACTCCACCCCTGGGGTGGAAGATTGGGGATAACCCAACTCAGGACCCTACTTGTGTGAGGATGTTCAAGGAGATTTGGGAAGAGATAGCCAATGTGAAAAGAGAGAGGGAATTTCAGCAGCAAGAGGATATAGCTATGGTGACCACCTCAAACTCTTCGCTGACAACTCTGGATCAGGGCCAAGCTTACAGTTCAGTAACCAATCGAAAGGAGTCACAGGACAAATACACAGAACTAGCTGTTAGGAAGTTTAAAATTGAAGAACAAATGCTACAACTTTCTCAATCTTTCTCTGGAATTGAGGAAGAAATGAACTCATTGCTAGAAGAAATGAGGGTGCTGAAACCAACCATGGAAGAATCAGCATTTGTCTACTCAGAAACAGCTGAAGTACCAATGCTGACATCGGACATAGAAGGAGGGACAAAAGATAAGATGGAATCAAGAGACAAGGCTAGTATAGAGGACAAGGCAGCAAAGATAGAGAGGCTGCGGAGTAGCTTCAGGATTTGCAAGCCACAAGGAACATTTCTGTGGCCAGACACGAGTGCGTCTCCAAAGGGTGTGGTTCAGCAAACCGACTCTTTTTTGGTCCCCACTCCACCCTCAGTTTCCTCTTCCAACAAGTCAGCAACCCGCCTATTCCTTCATACACCAAATGAGCACAACCTGGGCTGCCCTCTGAAGCCATTGGCTGAGAGACGTGCAGTCAACATAAGCACTTTGAGCAATGTGACCATGCCACCTGAGAAGACAAACCCCCAGTCCCAGATTGACTCTATCAGCATTGGCAAAACCCTCAACATCAACCTCAATGAGTTCCCTGATGCCTACAACACTGACTCTACTGCAATTCCCGAGGCTCTCACTTACCAGAGAAAGCATCAAAATATGGTGAAGGCCAAAAGGACCATGGAGCATGACACAGATCCAGGGAAGGATATTATGGGATTGTTAAGGTACAACTCTAAGCATCAGCAAAGGTGGTGTTCTTCTTCTTTCACTAGTAGTTTTGAAGCAAATGGTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

AA_kinase

Protein Analysis

683

Amino Acids

77.88

Weight (kDa)

8.57

Isoelectric Point (pI)

56.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	241 - 323	8.8e-24	Winged helix-turn-helix domain in plant reproductive proteins

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51330 AT5G51330
fragaria_vesca	FvH4_1g24020 FvH4_1g24020 FvH4_7g27150 FvH4_7g27150 FvH4_7g27150 FvH4_7g27150
malus_domestica	MD01G1180700.v1.1 MD07G1251100.v1.1
prunus_persica	Prupe.2G133400_v2.0.a1 Prupe.2G133400_v2.0.a1 Prupe.2G274700_v2.0.a1
pyrus_communis	pycom01g19090
rosa_chinensis	RchiOBHm_Chr1g0373991 RchiOBHm_Chr2g0120161
rosa_laevigata	RLG00000016013 RLG00000018527 RLG00000026788
rosa_multiflora	Rmu_co8084184.1_g000001 Rmu_co8202680.1_g000001 Rmu_co8293435.1_g000001 Rmu_co8298741.1_g000001 Rmu_sc0005304.1_g000004 Rmu_sc0008322.1_g000013 Rmu_sc0015468.1_g000001 Rmu_sc0015469.1_g000002 Rmu_sc0020978.1_g000001 Rmu_sc0020979.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123660 Rroxscaffold_4G00283840 Rroxscaffold_4G00283860
rosa_rugosa	Rorug01G0380000 Rorug01G0380100 Rorug02G0227300
rosa_samantha	Rh1AG390500 Rh1BG354600 Rh1CG367700 Rh1DG385300 Rh2AG283900 Rh2BG295200 Rh2CG272600 Rh2DG044200 Rh2DG308900
rosa_wichuraiana	Rw1G034470 Rw2G003810 Rw2G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1392
AccII	CGCG	2 cut(s)	329, 649
AciI	CCGC	3 cut(s)	468, 1513, 1657
AclWI	GGATC	4 cut(s)	1004, 1017, 1200, 1943
AcoI	YGGCCR	1 cut(s)	1556
AcsI	RAATTY	1 cut(s)	1130
AcuI	CTGAAG	3 cut(s)	1428, 1507, 1724
AcyI	GRCGYC	1 cut(s)	409
AfaI	GTAC	3 cut(s)	11, 1413, 1982
AfiI	CCNNNNNNNGG	4 cut(s)	55, 1031, 1035, 1060
AflII	CTTAAG	1 cut(s)	764
AflIII	ACRYGT	1 cut(s)	647
AgsI	TTSAA	7 cut(s)	205, 626, 707, 877, 1087, 1280, 2036
AhdI	GACNNNNNGTC	1 cut(s)	1727
AhlI	ACTAGT	2 cut(s)	496, 2024
AjiI	CACGTC	1 cut(s)	1724
AjnI	CCWGG	3 cut(s)	1029, 1689, 1951
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AleI	CACNNNNGTG	1 cut(s)	823
Alw21I	GWGCWC	5 cut(s)	43, 536, 817, 949, 1686
Alw26I	GTCTC	5 cut(s)	77, 201, 1461, 1578, 1714
AlwI	GGATC	4 cut(s)	1004, 1017, 1200, 1943
Ama87I	CYCGRG	1 cut(s)	1877
AoxI	GGCC	5 cut(s)	399, 831, 1198, 1556, 1920
ApeKI	GCWGC	6 cut(s)	641, 746, 1138, 1493, 1510, 1695
ApoI	RAATTY	1 cut(s)	1130
ArsI	GACNNNNNNTTYG	2 cut(s)	1769, 1801
AspLEI	GCGC	2 cut(s)	492, 911
AspS9I	GGNCC	8 cut(s)	399, 475, 687, 832, 1063, 1198, 1612, 1929
AsuC2I	CCSGG	3 cut(s)	424, 835, 903
AsuHPI	GGTGA	3 cut(s)	781, 1171, 1927
AvaI	CYCGRG	1 cut(s)	1877
AvaII	GGWCC	5 cut(s)	475, 687, 1063, 1612, 1929
BalI	TGGCCA	1 cut(s)	1558
BamHI	GGATCC	1 cut(s)	1009
BanII	GRGCYC	1 cut(s)	536
BauI	CACGAG	1 cut(s)	1564
BbsI	GAAGAC	2 cut(s)	638, 1778
Bbv12I	GWGCWC	5 cut(s)	43, 536, 817, 949, 1686
BbvI	GCAGC	6 cut(s)	653, 758, 1150, 1497, 1505, 1682
BccI	CCATC	7 cut(s)	95, 255, 442, 565, 717, 935, 1450
BceAI	ACGGC	2 cut(s)	295, 422
BciT130I	CCWGG	3 cut(s)	1031, 1691, 1953
BcnI	CCSGG	3 cut(s)	424, 835, 903
BcoDI	GTCTC	5 cut(s)	77, 201, 1461, 1578, 1714
BcuI	ACTAGT	2 cut(s)	496, 2024
BfaI	CTAG	6 cut(s)	122, 497, 1256, 1343, 1476, 2025
BfoI	RGCGCY	1 cut(s)	912
BfrI	CTTAAG	1 cut(s)	764
BisI	GCNGC	7 cut(s)	469, 642, 747, 1139, 1494, 1511, 1696
BlsI	GCNGC	7 cut(s)	470, 643, 748, 1140, 1495, 1512, 1697
BmcAI	AGTACT	1 cut(s)	11
Bme1390I	CCNGG	6 cut(s)	424, 835, 903, 1031, 1691, 1953
Bme18I	GGWCC	5 cut(s)	475, 687, 1063, 1612, 1929
BmeRI	GACNNNNNGTC	1 cut(s)	1727
BmeT110I	CYCGRG	1 cut(s)	1877
BmgBI	CACGTC	1 cut(s)	1724
BmgT120I	GGNCC	8 cut(s)	399, 475, 687, 832, 1063, 1198, 1612, 1929
BmiI	GGNNCC	4 cut(s)	689, 1011, 1065, 1614
BmrFI	CCNGG	6 cut(s)	424, 835, 903, 1031, 1691, 1953
BmrI	ACTGGG	1 cut(s)	1777
BmsI	GCATC	4 cut(s)	34, 1837, 1912, 2002
BmuI	ACTGGG	1 cut(s)	1777
BpiI	GAAGAC	2 cut(s)	638, 1778
BplI	GAGNNNNNCTC	2 cut(s)	1558, 1590
BpmI	CTGGAG	1 cut(s)	983
BpuEI	CTTGAG	1 cut(s)	63
BpuMI	CCSGG	3 cut(s)	424, 835, 903
BsaHI	GRCGYC	1 cut(s)	409
BsaI	GGTCTC	1 cut(s)	77
BsaJI	CCNNGG	7 cut(s)	1029, 1030, 1371, 1690, 1878, 1932, 1952
BsaWI	WCCGGW	3 cut(s)	345, 501, 684
BsaXI	ACNNNNNCTCC	2 cut(s)	936, 966
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 1031, 1035, 1060
Bse1I	ACTGG	3 cut(s)	624, 859, 1783
Bse3DI	GCAATG	2 cut(s)	1337, 1756
BseBI	CCWGG	3 cut(s)	1031, 1691, 1953
BseDI	CCNNGG	7 cut(s)	1029, 1030, 1371, 1690, 1878, 1932, 1952
BseGI	GGATG	3 cut(s)	96, 580, 1086
BseLI	CCNNNNNNNGG	4 cut(s)	55, 1031, 1035, 1060
BseMI	GCAATG	2 cut(s)	1337, 1756
BseMII	CTCAG	8 cut(s)	165, 786, 812, 1073, 1410, 1641, 1707, 1758
BseNI	ACTGG	3 cut(s)	624, 859, 1783
BseRI	GAGGAG	1 cut(s)	767
BseXI	GCAGC	6 cut(s)	653, 758, 1150, 1497, 1505, 1682
BseYI	CCCAGC	2 cut(s)	887, 998
BsgI	GTGCAG	1 cut(s)	1746
Bsh1236I	CGCG	2 cut(s)	329, 649
BshFI	GGCC	5 cut(s)	401, 833, 1200, 1558, 1922
BsiHKAI	GWGCWC	5 cut(s)	43, 536, 817, 949, 1686
BsiHKCI	CYCGRG	1 cut(s)	1877
BsiSI	CCGG	7 cut(s)	346, 402, 424, 502, 685, 835, 902
BslFI	GGGAC	4 cut(s)	863, 1456, 1598, 1771
BslI	CCNNNNNNNGG	4 cut(s)	55, 1031, 1035, 1060
BsmAI	GTCTC	5 cut(s)	77, 201, 1461, 1578, 1714
BsmBI	CGTCTC	2 cut(s)	1578, 1714
BsmFI	GGGAC	4 cut(s)	863, 1456, 1598, 1771
BsnI	GGCC	5 cut(s)	401, 833, 1200, 1558, 1922
Bso31I	GGTCTC	1 cut(s)	77
BsoBI	CYCGRG	1 cut(s)	1877
Bsp1286I	GDGCHC	5 cut(s)	43, 536, 817, 949, 1686
Bsp143I	GATC	4 cut(s)	913, 1009, 1192, 1948
Bsp19I	CCATGG	2 cut(s)	1371, 1932
BspACI	CCGC	3 cut(s)	468, 1513, 1657
BspANI	GGCC	5 cut(s)	401, 833, 1200, 1558, 1922
BspCNI	CTCAG	8 cut(s)	164, 787, 813, 1072, 1409, 1640, 1708, 1759
BspFNI	CGCG	2 cut(s)	329, 649
BspHI	TCATGA	1 cut(s)	679
BspLI	GGNNCC	4 cut(s)	689, 1011, 1065, 1614
BspPI	GGATC	4 cut(s)	1004, 1017, 1200, 1943
BspTI	CTTAAG	1 cut(s)	764
BspTNI	GGTCTC	1 cut(s)	77
BsrDI	GCAATG	2 cut(s)	1337, 1756
BsrI	ACTGG	3 cut(s)	624, 859, 1783
BssECI	CCNNGG	7 cut(s)	1029, 1030, 1371, 1690, 1878, 1932, 1952
BssMI	GATC	4 cut(s)	913, 1009, 1192, 1948
BssNI	GRCGYC	1 cut(s)	409
BssSI	CACGAG	1 cut(s)	1564
BssT1I	CCWWGG	2 cut(s)	1371, 1932
Bst2BI	CACGAG	1 cut(s)	1564
Bst2UI	CCWGG	3 cut(s)	1031, 1691, 1953
Bst4CI	ACNGT	1 cut(s)	1211
Bst6I	CTCTTC	5 cut(s)	150, 605, 1095, 1180, 1642
BstACI	GRCGYC	1 cut(s)	409
BstAFI	CTTAAG	1 cut(s)	764
BstAPI	GCANNNNNTGC	1 cut(s)	65
BstC8I	GCNNGC	1 cut(s)	1535
BstDEI	CTNAG	9 cut(s)	151, 795, 821, 1059, 1396, 1627, 1716, 1767, 1989
BstDSI	CCRYGG	2 cut(s)	1371, 1932
BstEII	GGTNACC	1 cut(s)	1159
BstF5I	GGATG	3 cut(s)	96, 580, 1086
BstFNI	CGCG	2 cut(s)	329, 649
BstH2I	RGCGCY	1 cut(s)	912
BstHHI	GCGC	2 cut(s)	492, 911
BstKTI	GATC	4 cut(s)	916, 1012, 1195, 1951
BstMAI	GTCTC	5 cut(s)	77, 201, 1461, 1578, 1714
BstMBI	GATC	4 cut(s)	913, 1009, 1192, 1948
BstMWI	GCNNNNNNNGC	4 cut(s)	65, 655, 944, 1746
BstNI	CCWGG	3 cut(s)	1031, 1691, 1953
BstNSI	RCATGY	1 cut(s)	68
BstPI	GGTNACC	1 cut(s)	1159
BstSCI	CCNGG	6 cut(s)	422, 833, 901, 1029, 1689, 1951
BstUI	CGCG	2 cut(s)	329, 649
BstV1I	GCAGC	6 cut(s)	653, 758, 1150, 1497, 1505, 1682
BstV2I	GAAGAC	2 cut(s)	638, 1778
BstX2I	RGATCY	2 cut(s)	1009, 1948
BstYI	RGATCY	2 cut(s)	1009, 1948
BsuRI	GGCC	5 cut(s)	401, 833, 1200, 1558, 1922
BtgI	CCRYGG	2 cut(s)	1371, 1932
BtrI	CACGTC	1 cut(s)	1724
BtsCI	GGATG	3 cut(s)	96, 580, 1086
BtsIMutI	CAGTG	4 cut(s)	219, 818, 852, 1857
Cac8I	GCNNGC	1 cut(s)	1535
CciI	TCATGA	1 cut(s)	679
CfoI	GCGC	2 cut(s)	492, 911
Cfr13I	GGNCC	8 cut(s)	399, 475, 687, 832, 1063, 1198, 1612, 1929
CseI	GACGC	5 cut(s)	318, 398, 638, 655, 1560
Csp6I	GTAC	3 cut(s)	10, 1412, 1981
CspCI	CAANNNNNGTGG	2 cut(s)	1566, 1601
CviQI	GTAC	3 cut(s)	10, 1412, 1981
DdeI	CTNAG	9 cut(s)	151, 795, 821, 1059, 1396, 1627, 1716, 1767, 1989
DpnI	GATC	4 cut(s)	915, 1011, 1194, 1950
DpnII	GATC	4 cut(s)	913, 1009, 1192, 1948
DraI	TTTAAA	2 cut(s)	132, 1273
DriI	GACNNNNNGTC	1 cut(s)	1727
EaeI	YGGCCR	1 cut(s)	1556
Eam1104I	CTCTTC	5 cut(s)	150, 605, 1095, 1180, 1642
Eam1105I	GACNNNNNGTC	1 cut(s)	1727
EarI	CTCTTC	5 cut(s)	150, 605, 1095, 1180, 1642
Ecl136II	GAGCTC	1 cut(s)	534
Eco130I	CCWWGG	2 cut(s)	1371, 1932
Eco24I	GRGCYC	1 cut(s)	536
Eco31I	GGTCTC	1 cut(s)	77
Eco47I	GGWCC	5 cut(s)	475, 687, 1063, 1612, 1929
Eco53kI	GAGCTC	1 cut(s)	534
Eco57I	CTGAAG	3 cut(s)	1428, 1507, 1724
Eco88I	CYCGRG	1 cut(s)	1877
Eco91I	GGTNACC	1 cut(s)	1159
EcoICRI	GAGCTC	1 cut(s)	534
EcoO109I	RGGNCCY	1 cut(s)	1063
EcoO65I	GGTNACC	1 cut(s)	1159
EcoRII	CCWGG	3 cut(s)	1029, 1689, 1951
EcoT14I	CCWWGG	2 cut(s)	1371, 1932
EcoT38I	GRGCYC	1 cut(s)	536
ErhI	CCWWGG	2 cut(s)	1371, 1932
Esp3I	CGTCTC	2 cut(s)	1578, 1714
FalI	AAGNNNNNCTT	1 cut(s)	28
FaqI	GGGAC	4 cut(s)	863, 1456, 1598, 1771
FauI	CCCGC	1 cut(s)	1664
FauNDI	CATATG	1 cut(s)	882
FblI	GTMKAC	1 cut(s)	1392
Fnu4HI	GCNGC	7 cut(s)	469, 642, 747, 1139, 1494, 1511, 1696
FokI	GGATG	3 cut(s)	83, 587, 1093
FriOI	GRGCYC	1 cut(s)	536
Fsp4HI	GCNGC	7 cut(s)	469, 642, 747, 1139, 1494, 1511, 1696
FspBI	CTAG	6 cut(s)	122, 497, 1256, 1343, 1476, 2025
GlaI	GCGC	2 cut(s)	491, 910
GluI	GCNGC	7 cut(s)	469, 642, 747, 1139, 1494, 1511, 1696
GsaI	CCCAGC	2 cut(s)	891, 1002
GsuI	CTGGAG	1 cut(s)	983
HaeII	RGCGCY	1 cut(s)	912
HaeIII	GGCC	5 cut(s)	401, 833, 1200, 1558, 1922
HapII	CCGG	7 cut(s)	346, 402, 424, 502, 685, 835, 902
HgaI	GACGC	5 cut(s)	318, 398, 638, 655, 1560
HhaI	GCGC	2 cut(s)	492, 911
Hin1I	GRCGYC	1 cut(s)	409
Hin6I	GCGC	2 cut(s)	490, 909
HinP1I	GCGC	2 cut(s)	490, 909
HincII	GTYRAC	1 cut(s)	1732
HindII	GTYRAC	1 cut(s)	1732
HindIII	AAGCTT	2 cut(s)	134, 1203
HpaII	CCGG	7 cut(s)	346, 402, 424, 502, 685, 835, 902
HphI	GGTGA	3 cut(s)	781, 1171, 1927
Hpy166II	GTNNAC	2 cut(s)	1393, 1732
Hpy8I	GTNNAC	2 cut(s)	1393, 1732
Hpy99I	CGWCG	5 cut(s)	302, 334, 414, 649, 654
HpyCH4III	ACNGT	1 cut(s)	1211
HpyCH4IV	ACGT	1 cut(s)	1723
HpyCH4V	TGCA	4 cut(s)	731, 1533, 1727, 1871
HpyF10VI	GCNNNNNNNGC	4 cut(s)	65, 655, 944, 1746
HpyF3I	CTNAG	9 cut(s)	151, 795, 821, 1059, 1396, 1627, 1716, 1767, 1989
HpySE526I	ACGT	1 cut(s)	1723
Hsp92I	GRCGYC	1 cut(s)	409
HspAI	GCGC	2 cut(s)	490, 909
Kzo9I	GATC	4 cut(s)	913, 1009, 1192, 1948
LmnI	GCTCC	3 cut(s)	904, 944, 1936
Lsp1109I	GCAGC	6 cut(s)	653, 758, 1150, 1497, 1505, 1682
LweI	GCATC	4 cut(s)	34, 1837, 1912, 2002
MaeI	CTAG	6 cut(s)	122, 497, 1256, 1343, 1476, 2025
MaeII	ACGT	1 cut(s)	1723
MaeIII	GTNAC	5 cut(s)	508, 1159, 1216, 1233, 1753
MalI	GATC	4 cut(s)	915, 1011, 1194, 1950
MboI	GATC	4 cut(s)	913, 1009, 1192, 1948
MfeI	CAATTG	1 cut(s)	698
MflI	RGATCY	2 cut(s)	1009, 1948
MhlI	GDGCHC	5 cut(s)	43, 536, 817, 949, 1686
MlsI	TGGCCA	1 cut(s)	1558
MluCI	AATT	5 cut(s)	698, 1130, 1275, 1317, 1872
MluI	ACGCGT	1 cut(s)	647
MluNI	TGGCCA	1 cut(s)	1558
MlyI	GAGTC	6 cut(s)	532, 1015, 1241, 1595, 1790, 1856
MmeI	TCCRAC	4 cut(s)	312, 432, 632, 1665
Mox20I	TGGCCA	1 cut(s)	1558
MscI	TGGCCA	1 cut(s)	1558
MseI	TTAA	7 cut(s)	131, 186, 459, 765, 977, 1272, 1976
MslI	CAYNNNNRTG	6 cut(s)	99, 101, 252, 439, 823, 1552
Msp20I	TGGCCA	1 cut(s)	1558
MspA1I	CMGCKG	1 cut(s)	1406
MspCI	CTTAAG	1 cut(s)	764
MspI	CCGG	7 cut(s)	346, 402, 424, 502, 685, 835, 902
MspR9I	CCNGG	6 cut(s)	424, 835, 903, 1031, 1691, 1953
MunI	CAATTG	1 cut(s)	698
MvaI	CCWGG	3 cut(s)	1031, 1691, 1953
MvnI	CGCG	2 cut(s)	329, 649
MwoI	GCNNNNNNNGC	4 cut(s)	65, 655, 944, 1746
NciI	CCSGG	3 cut(s)	424, 835, 903
NcoI	CCATGG	2 cut(s)	1371, 1932
NdeI	CATATG	1 cut(s)	882
NdeII	GATC	4 cut(s)	913, 1009, 1192, 1948
NlaIV	GGNNCC	4 cut(s)	689, 1011, 1065, 1614
NmeAIII	GCCGAG	1 cut(s)	444
NmuCI	GTSAC	3 cut(s)	1159, 1233, 1753
NspI	RCATGY	1 cut(s)	68
OliI	CACNNNNGTG	1 cut(s)	823
PagI	TCATGA	1 cut(s)	679
PasI	CCCWGGG	1 cut(s)	1030
PfeI	GAWTC	5 cut(s)	169, 351, 799, 1379, 1460
PflFI	GACNNNGTC	1 cut(s)	408
PkrI	GCNGC	7 cut(s)	470, 643, 748, 1140, 1495, 1512, 1697
PleI	GAGTC	6 cut(s)	531, 1015, 1240, 1595, 1790, 1856
PpsI	GAGTC	6 cut(s)	531, 1015, 1240, 1595, 1790, 1856
PpuMI	RGGWCCY	1 cut(s)	1063
Psp124BI	GAGCTC	1 cut(s)	536
Psp5II	RGGWCCY	1 cut(s)	1063
Psp6I	CCWGG	3 cut(s)	1029, 1689, 1951
PspEI	GGTNACC	1 cut(s)	1159
PspFI	CCCAGC	2 cut(s)	887, 998
PspGI	CCWGG	3 cut(s)	1029, 1689, 1951
PspN4I	GGNNCC	4 cut(s)	689, 1011, 1065, 1614
PspPI	GGNCC	8 cut(s)	399, 475, 687, 832, 1063, 1198, 1612, 1929
PspPPI	RGGWCCY	1 cut(s)	1063
PsrI	GAACNNNNNNTAC	2 cut(s)	1275, 1307
PsuI	RGATCY	2 cut(s)	1009, 1948
PsyI	GACNNNGTC	1 cut(s)	408
PvuII	CAGCTG	1 cut(s)	1406
RsaI	GTAC	3 cut(s)	11, 1413, 1982
RsaNI	GTAC	3 cut(s)	10, 1412, 1981
RseI	CAYNNNNRTG	6 cut(s)	99, 101, 252, 439, 823, 1552
SacI	GAGCTC	1 cut(s)	536
SaqAI	TTAA	7 cut(s)	131, 186, 459, 765, 977, 1272, 1976
SatI	GCNGC	7 cut(s)	469, 642, 747, 1139, 1494, 1511, 1696
Sau3AI	GATC	4 cut(s)	913, 1009, 1192, 1948
Sau96I	GGNCC	8 cut(s)	399, 475, 687, 832, 1063, 1198, 1612, 1929
ScaI	AGTACT	1 cut(s)	11
SchI	GAGTC	6 cut(s)	532, 1015, 1241, 1595, 1790, 1856
ScrFI	CCNGG	6 cut(s)	424, 835, 903, 1031, 1691, 1953
SduI	GDGCHC	5 cut(s)	43, 536, 817, 949, 1686
SfaNI	GCATC	4 cut(s)	34, 1837, 1912, 2002
SinI	GGWCC	5 cut(s)	475, 687, 1063, 1612, 1929
SmiMI	CAYNNNNRTG	6 cut(s)	99, 101, 252, 439, 823, 1552
SmlI	CTYRAG	2 cut(s)	78, 764
SmoI	CTYRAG	2 cut(s)	78, 764
SpeI	ACTAGT	2 cut(s)	496, 2024
Sse9I	AATT	5 cut(s)	698, 1130, 1275, 1317, 1872
SsiI	CCGC	3 cut(s)	468, 1513, 1657
SspMI	CTAG	6 cut(s)	122, 497, 1256, 1343, 1476, 2025
SstI	GAGCTC	1 cut(s)	536
StyD4I	CCNGG	6 cut(s)	422, 833, 901, 1029, 1689, 1951
StyI	CCWWGG	2 cut(s)	1371, 1932
TaaI	ACNGT	1 cut(s)	1211
TaiI	ACGT	1 cut(s)	1726
TaqI	TCGA	5 cut(s)	90, 167, 297, 530, 1225
TasI	AATT	5 cut(s)	698, 1130, 1275, 1317, 1872
TatI	WGTACW	1 cut(s)	9
TauI	GCSGC	1 cut(s)	471
TfiI	GAWTC	5 cut(s)	169, 351, 799, 1379, 1460
Tru1I	TTAA	7 cut(s)	131, 186, 459, 765, 977, 1272, 1976
Tru9I	TTAA	7 cut(s)	131, 186, 459, 765, 977, 1272, 1976
TscAI	CASTG	4 cut(s)	219, 825, 859, 1864
TseFI	GTSAC	3 cut(s)	1159, 1233, 1753
TseI	GCWGC	6 cut(s)	641, 746, 1138, 1493, 1510, 1695
Tsp45I	GTSAC	3 cut(s)	1159, 1233, 1753
TspDTI	ATGAA	9 cut(s)	17, 99, 132, 176, 591, 668, 788, 1346, 1658
TspGWI	ACGGA	3 cut(s)	429, 581, 823
TspRI	CASTG	4 cut(s)	219, 825, 859, 1864
Tth111I	GACNNNGTC	1 cut(s)	408
Vha464I	CTTAAG	1 cut(s)	764
VpaK11BI	GGWCC	5 cut(s)	475, 687, 1063, 1612, 1929
XapI	RAATTY	1 cut(s)	1130
XceI	RCATGY	1 cut(s)	68
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1032, 1930
XmiI	GTMKAC	1 cut(s)	1392
XspI	CTAG	6 cut(s)	122, 497, 1256, 1343, 1476, 2025
ZrmI	AGTACT	1 cut(s)	11

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.