Rh2CG272600

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001779
Physical Location & Seq
Forward (+)
29800383 .. 29808306
7924 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG272600.1

Sequence Viewer

Length: 2961 bp
ATGAAGAAGTACTTGGAGAAGAAGCAAAGCGCAGAAAAAAGCTGCAGCAGCACTCTGCAAACTCTCGCCATTTGTTCTTCCCTAGAGGCCACAGAGCACATAGGAGTGGGTTGTTTCTATGAGCTAGACCACTCCAAGCTTCCTCCTGAAGCTCCAGAGCAGCTCAACTCTATTCGAATCGTTATGGTGAGCAAGAAGGCTTTGTTCAAGGTCTCGGTGAGGTTTCCGAGCATTCACTCTCTGCAAGCTTTTCTGAGCGAGAATGGGAATGTCAAGAACCAGCTTCCGGCGCTCGACGAGAAGTACTTGTTGGACCCGCAGACGGCGTCGGAGGTGCTTTACCGGCGGGTCCCGCCGGAGGAAATTTCGGACCGGAGCAAGGTGTGGAGCTTCTGGGCGGTGATTACGCGGCGTCGTTTTGAGAATCTGATCAGAGTTAGCCCGGTGAAGGAGGCGCCTCGGTCTGAGATTAGTCTCAGTGGGTTGGTCCCGTGGGGCACGCGCAAGCGGGTTCGGTTCCTGAGCCCCAATCGGAGCCCGACGACTCCGATTCCGTCGAGCTCTGAAGAGAAGGAGGTTGAGGGAGGTGGTGATGAGACGTCTGAGGAGGAAGAAGAAGAGGGTGAGCCGAATGTGGCGGCGGTGAAGAATCGAAGGAGTGAAAGAAGAAAGCAGCCCATTAAGAGTCAGAAGAAGAAGCCCAAACGTCAAGAACAGAGTAAGCAGATTGTGGTGCACAGTGGGAGTGAGAAGAGAATGGTTAAAGCTTCAGTGGCAAGATGGTCTGCTGGGAGGTATAAGTTGGCAGAGGAGAACATGTTTAAGGTAATGAAGGCAAGGGGGGCTACTGCTGGGAACCCAATAAGGAGACCGGCTCTGAGAAATGAGGCCCGGAAGTTGATCGGCGACACGGGTTTGATTGACCATTTGCTGAAGCATATGGCTGGCAAGGTGGCTCCAGGTGGGGTTGATAGGTTTCGGAGGCGGCACAATGCTGATGGGGCAATGGAGTATTGGCTTGAGAGTGCTGATTTGGTTGAGATAAGGAAGGAGGCTGGGGTTGAAGACCCTTATTGGACTCCACCACAGGGGTGGAAGCCTGGTGATGACCCTGCCCAAGACCCAACTTGTGCAGCAATGTTTAAGGAGCTGTGGGATGAGATAGCTAATCTGAAGAAGAGGGACGATGAATCCAAGCAGCCAGAGCAGGGTTTAGCTATGGTGACCACCACCTCAAACTCTTGGTTGACAAGTATGGACTGGGACCAAGCTTACAGTTCAGTCATTCAGCTAAAGGACAAATATACACAACTAGCTGTCAGGACATCCAAGTTCGAAGAACAGATGCAGCAAGCTTCTCAAACTTTGTCTGGAATGGAGGAAGAAATTAAGGTACTGAAATCAACCATGGAAGCGCCAGCAGCACCACTTATGTACTACGCAGAAGCAGCTGATGTACCACAACTGACAGACAATGAAAGAGGGGCAAAAGAGGACAAGGCAACAAAGCTAGAGAGACTGAGGAGTGGCTTCAAAATTTGCAGGCCACAGGGGACATTTCTGTGGCCAAACATGAACCTGTCTATGTCTCAACACAAAATTGACCAGTCTGCGGTCCCAACCACACCCTCTGTTACCTCTTCCACAAGACCAGCAACCCAACTAGATCTAGTCCTTACTCAGTCTCCACATGGACCCAATCCAGGCTCAAGCTCAGGCTCCCTTGTTAAGCCATTTGCTGAGAGACGCCCAGTCAATACATCAACTCTGTTACGCAATGTGACTAACCCACCCTCTCTTTCTCATGCTTTTACTCAAGTACCATCTGAGATTGAGAAGACTACCTCCCAGTCCCAGAGTGCCAAGACCCTTCAAATAAACCTCAATGAGATACCTGTTGATGCCCAACACAATGAATCTACTGCAATTTCTGGGACCCTTACCTACCAGAGAAGACATCAACTGATGAACGCCAGGAAAGAGAACAATGCAGATGCAAGGAAGGATAATATGAGCTTGAGAGGGCACTCCAAGTCTAAGCAGCAGCATGAGCATCATCAGCAAAGGTGCCGGAGAAATCCGCGCTTGGTGGTTAGCTGCTCGTCTTCTGAAACCGACTCCGGCTCTGACTCACTCAATGGAAATGGAAGACATTCCCAAATGTCGTCTATGACTCCTTTTGGGGTGACAATGAATGAAGCTGGGTTGTCCAGACCACCTTATAAATGGCGAAGGGTCTTGCTTAAAGTAAGCGGAGAAGCACTTGCCGGAGATCACACACAGAATATTGACCCAAAGGTAACAATGGAAATTGCAAGGGAGGTTGCATCTGTGACTCGCCTCGGCATTGAGGTTGCCATTGTTGTTGGTGGGGGAAATATATTCCGTGGAGCATCCTGGGCTGGAAGTAGTGGTCTTGACCGTTCATCCGCTGATTACATCGGGATGTTGGCTACTGTAATGAATTCAATATTTCTCCAAGCCACAATGGAGAGCATTGGTATCCCTACTCGAGTGCAGACTGCATTTCGGATGTCTGAGGTTGCAGAACCTTATATACGTCGAAGGGCTGTGAGGCATCTGGAAAAGGGCAGGGTAGTGATCTTTGCAGCAGGAACTGGAAATCCATTCTTTACAACAGATACTGCTGCAGCACTTCGTGGTGCAGAGATCAATGCAGAGGTGGTGCTGAAAGCTACAAATGTTGATGGAGTTTACGATGAGGATCCTAGGTGTAACCCAAATGCCTGTCTTCTTGATACTCTTACATATCAGGAGGTGACATCAAAAGATCTTTCAGTGATGGACATGACTGCTATTACTTTATGCCAGGAGAACAAAATTCCTGTTGTTGTGTTCAATCTAAACAAACCAGGTAACATCTCAAAAGCCATAAAGGGGGAGAAGGTTGGCACGTTAATTGGGGCAGCATGGAATTCCACAGTGGCGCCGAGAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
AA_kinase

Protein Analysis

986

Amino Acids

109.36

Weight (kDa)

9.18

Isoelectric Point (pI)

55.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_plant_repro PF25874 260 - 342 6.8e-25 Winged helix-turn-helix domain in plant reproductive proteins
AA_kinase PF00696 745 - 954 2e-35 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2223
AatII GACGTC 1 cut(s) 602
AccB1I GGYRCC 3 cut(s) 454, 2067, 2947
AccII CGCG 3 cut(s) 409, 502, 2083
AclWI GGATC 2 cut(s) 2720, 2733
AcoI YGGCCR 1 cut(s) 1565
AcsI RAATTY 5 cut(s) 363, 1536, 2464, 2841, 2935
AcuI CTGAAG 5 cut(s) 168, 585, 753, 953, 1193
AcyI GRCGYC 6 cut(s) 326, 412, 455, 599, 1747, 2948
AdeI CACNNNGTG 1 cut(s) 2660
AfaI GTAC 6 cut(s) 11, 305, 1395, 1436, 1458, 1821
AflIII ACRYGT 1 cut(s) 816
AgsI TTSAA 6 cut(s) 208, 1064, 1534, 1874, 2469, 2860
AhdI GACNNNNNGTC 1 cut(s) 1751
AjnI CCWGG 7 cut(s) 958, 1099, 1702, 1973, 2396, 2829, 2872
AjuI GAANNNNNNNTTGG 3 cut(s) 28, 293, 325
AleI CACNNNNGTG 1 cut(s) 1090
AloI GAACNNNNNNTCC 2 cut(s) 2608, 2640
Alw21I GWGCWC 3 cut(s) 99, 563, 738
Alw26I GTCTC 8 cut(s) 217, 479, 590, 862, 1510, 1593, 1689, 1738
Alw44I GTGCAC 1 cut(s) 734
AlwI GGATC 2 cut(s) 2720, 2733
AlwNI CAGNNNCTG 2 cut(s) 2618, 2645
Ama87I CYCGRG 1 cut(s) 2511
AoxI GGCC 4 cut(s) 87, 888, 1544, 1565
ApaLI GTGCAC 1 cut(s) 734
ApoI RAATTY 5 cut(s) 363, 1536, 2464, 2841, 2935
Asp700I GAANNNNTTC 1 cut(s) 2152
AspA2I CCTAGG 1 cut(s) 2729
AspLEI GCGC 7 cut(s) 32, 292, 457, 504, 1417, 2085, 2950
AspS9I GGNCC 9 cut(s) 313, 349, 370, 487, 889, 1264, 1615, 1694, 1935
AsuC2I CCSGG 2 cut(s) 443, 892
AsuII TTCGAA 2 cut(s) 175, 1335
AvaI CYCGRG 1 cut(s) 2511
AvaII GGWCC 8 cut(s) 313, 349, 370, 487, 1264, 1615, 1694, 1935
AvrII CCTAGG 1 cut(s) 2729
BaeGI GKGCMC 3 cut(s) 500, 738, 2028
BaeI ACNNNNGTAYC 2 cut(s) 1803, 1836
BalI TGGCCA 1 cut(s) 1567
BamHI GGATCC 1 cut(s) 2725
BanI GGYRCC 3 cut(s) 454, 2067, 2947
BanII GRGCYC 3 cut(s) 527, 539, 563
BbsI GAAGAC 6 cut(s) 1071, 1844, 1960, 2097, 2155, 2744
Bbv12I GWGCWC 3 cut(s) 99, 563, 738
BccI CCATC 5 cut(s) 774, 992, 1831, 2702, 2797
BceAI ACGGC 1 cut(s) 339
BciT130I CCWGG 7 cut(s) 960, 1101, 1704, 1975, 2398, 2831, 2874
BciVI GTATCC 1 cut(s) 2513
BclI TGATCA 1 cut(s) 429
BcnI CCSGG 2 cut(s) 443, 892
BcoDI GTCTC 8 cut(s) 217, 479, 590, 862, 1510, 1593, 1689, 1738
BfaI CTAG 7 cut(s) 83, 125, 1313, 1511, 1664, 1670, 2730
BfmI CTRYAG 2 cut(s) 43, 2649
BfoI RGCGCY 4 cut(s) 293, 458, 1418, 2951
BfuI GTATCC 1 cut(s) 2513
BglII AGATCT 2 cut(s) 1666, 2791
BlnI CCTAGG 1 cut(s) 2729
BmcAI AGTACT 2 cut(s) 11, 305
Bme1390I CCNGG 9 cut(s) 443, 892, 960, 1101, 1704, 1975, 2398, 2831, 2874
Bme18I GGWCC 8 cut(s) 313, 349, 370, 487, 1264, 1615, 1694, 1935
BmeRI GACNNNNNGTC 1 cut(s) 1751
BmeT110I CYCGRG 1 cut(s) 2511
BmgT120I GGNCC 9 cut(s) 313, 349, 370, 487, 889, 1264, 1615, 1694, 1935
BmrFI CCNGG 9 cut(s) 443, 892, 960, 1101, 1704, 1975, 2398, 2831, 2874
BmrI ACTGGG 3 cut(s) 1270, 1745, 1843
BmsI GCATC 7 cut(s) 1335, 1891, 1984, 2062, 2336, 2402, 2587
BmuI ACTGGG 3 cut(s) 1270, 1745, 1843
BpiI GAAGAC 6 cut(s) 1071, 1844, 1960, 2097, 2155, 2744
BplI GAGNNNNNCTC 2 cut(s) 859, 891
BpmI CTGGAG 2 cut(s) 138, 942
Bpu10I CCTNAGC 2 cut(s) 521, 1714
Bpu14I TTCGAA 2 cut(s) 175, 1335
BpuEI CTTGAG 4 cut(s) 1040, 1693, 1800, 2038
BpuMI CCSGG 2 cut(s) 443, 892
BsaBI GATNNNNATC 1 cut(s) 2724
BsaHI GRCGYC 6 cut(s) 326, 412, 455, 599, 1747, 2948
BsaI GGTCTC 2 cut(s) 217, 862
BsaJI CCNNGG 7 cut(s) 458, 491, 1407, 2341, 2386, 2397, 2729
BsaWI WCCGGW 1 cut(s) 372
BsaXI ACNNNNNCTCC 4 cut(s) 803, 833, 1669, 1699
Bse118I RCCGGY 2 cut(s) 342, 871
Bse1I ACTGG 5 cut(s) 1265, 1606, 1751, 1849, 2623
Bse3DI GCAATG 3 cut(s) 1011, 1143, 1783
Bse8I GATNNNNATC 1 cut(s) 2724
BseBI CCWGG 7 cut(s) 960, 1101, 1704, 1975, 2398, 2831, 2874
BseDI CCNNGG 7 cut(s) 458, 491, 1407, 2341, 2386, 2397, 2729
BseGI GGATG 6 cut(s) 1162, 1325, 2393, 2426, 2451, 2538
BseJI GATNNNNATC 1 cut(s) 2724
BseMI GCAATG 3 cut(s) 1011, 1143, 1783
BseNI ACTGG 5 cut(s) 1265, 1606, 1751, 1849, 2623
BseRI GAGGAG 3 cut(s) 620, 824, 1537
BseSI GKGCMC 3 cut(s) 500, 738, 2028
BseYI CCCAGC 4 cut(s) 788, 851, 1055, 2201
BsgI GTGCAG 3 cut(s) 1152, 2537, 2685
Bsh1236I CGCG 3 cut(s) 409, 502, 2083
BshFI GGCC 4 cut(s) 89, 890, 1546, 1567
BshNI GGYRCC 3 cut(s) 454, 2067, 2947
BsiHKAI GWGCWC 3 cut(s) 99, 563, 738
BsiHKCI CYCGRG 1 cut(s) 2511
BslFI GGGAC 8 cut(s) 335, 473, 1196, 1277, 1567, 1601, 1837, 1948
BsmAI GTCTC 8 cut(s) 217, 479, 590, 862, 1510, 1593, 1689, 1738
BsmBI CGTCTC 2 cut(s) 590, 1738
BsmFI GGGAC 8 cut(s) 335, 473, 1196, 1277, 1567, 1601, 1837, 1948
BsmI GAATGC 1 cut(s) 231
BsnI GGCC 4 cut(s) 89, 890, 1546, 1567
Bso31I GGTCTC 2 cut(s) 217, 862
BsoBI CYCGRG 1 cut(s) 2511
Bsp119I TTCGAA 2 cut(s) 175, 1335
Bsp1286I GDGCHC 7 cut(s) 99, 500, 527, 539, 563, 738, 2028
Bsp143I GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
Bsp19I CCATGG 1 cut(s) 1407
BspANI GGCC 4 cut(s) 89, 890, 1546, 1567
BspFNI CGCG 3 cut(s) 409, 502, 2083
BspMAI CTGCAG 2 cut(s) 47, 2653
BspPI GGATC 2 cut(s) 2720, 2733
BspT104I TTCGAA 2 cut(s) 175, 1335
BspT107I GGYRCC 3 cut(s) 454, 2067, 2947
BspTNI GGTCTC 2 cut(s) 217, 862
BsrDI GCAATG 3 cut(s) 1011, 1143, 1783
BsrFI RCCGGY 2 cut(s) 342, 871
BsrI ACTGG 5 cut(s) 1265, 1606, 1751, 1849, 2623
BssAI RCCGGY 2 cut(s) 342, 871
BssECI CCNNGG 7 cut(s) 458, 491, 1407, 2341, 2386, 2397, 2729
BssMI GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
BssNI GRCGYC 6 cut(s) 326, 412, 455, 599, 1747, 2948
BssT1I CCWWGG 2 cut(s) 1407, 2729
Bst2UI CCWGG 7 cut(s) 960, 1101, 1704, 1975, 2398, 2831, 2874
Bst4CI ACNGT 5 cut(s) 740, 1277, 2423, 2458, 2944
Bst6I CTCTTC 5 cut(s) 561, 612, 746, 1172, 1645
BstACI GRCGYC 6 cut(s) 326, 412, 455, 599, 1747, 2948
BstBI TTCGAA 2 cut(s) 175, 1335
BstC8I GCNNGC 7 cut(s) 246, 500, 506, 946, 1353, 1419, 1544
BstDSI CCRYGG 3 cut(s) 491, 1407, 2386
BstEII GGTNACC 1 cut(s) 1222
BstF5I GGATG 6 cut(s) 1162, 1325, 2393, 2426, 2451, 2538
BstFNI CGCG 3 cut(s) 409, 502, 2083
BstH2I RGCGCY 4 cut(s) 293, 458, 1418, 2951
BstHHI GCGC 7 cut(s) 32, 292, 457, 504, 1417, 2085, 2950
BstKTI GATC 8 cut(s) 432, 903, 1669, 2275, 2604, 2673, 2728, 2794
BstMAI GTCTC 8 cut(s) 217, 479, 590, 862, 1510, 1593, 1689, 1738
BstMBI GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
BstNI CCWGG 7 cut(s) 960, 1101, 1704, 1975, 2398, 2831, 2874
BstNSI RCATGY 1 cut(s) 820
BstPI GGTNACC 1 cut(s) 1222
BstSCI CCNGG 9 cut(s) 441, 890, 958, 1099, 1702, 1973, 2396, 2829, 2872
BstSFI CTRYAG 2 cut(s) 43, 2649
BstSLI GKGCMC 3 cut(s) 500, 738, 2028
BstUI CGCG 3 cut(s) 409, 502, 2083
BstV2I GAAGAC 6 cut(s) 1071, 1844, 1960, 2097, 2155, 2744
BstX2I RGATCY 3 cut(s) 1666, 2725, 2791
BstXI CCANNNNNNTGG 1 cut(s) 1092
BstYI RGATCY 3 cut(s) 1666, 2725, 2791
BsuI GTATCC 1 cut(s) 2513
BsuRI GGCC 4 cut(s) 89, 890, 1546, 1567
BtgI CCRYGG 3 cut(s) 491, 1407, 2386
BtsCI GGATG 6 cut(s) 1162, 1325, 2393, 2426, 2451, 2538
BtsIMutI CAGTG 5 cut(s) 484, 745, 777, 2805, 2949
Cac8I GCNNGC 7 cut(s) 246, 500, 506, 946, 1353, 1419, 1544
CaiI CAGNNNCTG 2 cut(s) 2618, 2645
CfoI GCGC 7 cut(s) 32, 292, 457, 504, 1417, 2085, 2950
Cfr10I RCCGGY 2 cut(s) 342, 871
Cfr13I GGNCC 9 cut(s) 313, 349, 370, 487, 889, 1264, 1615, 1694, 1935
CpoI CGGWCCG 1 cut(s) 370
CseI GACGC 3 cut(s) 315, 401, 1755
CsiI ACCWGGT 1 cut(s) 2872
Csp6I GTAC 6 cut(s) 10, 304, 1394, 1435, 1457, 1820
CspI CGGWCCG 1 cut(s) 370
CviAII CATG 9 cut(s) 817, 1408, 1573, 1691, 1805, 2048, 2809, 2931, 2958
CviQI GTAC 6 cut(s) 10, 304, 1394, 1435, 1457, 1820
DinI GGCGCC 2 cut(s) 456, 2949
DpnI GATC 8 cut(s) 431, 902, 1668, 2274, 2603, 2672, 2727, 2793
DpnII GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
DraIII CACNNNGTG 1 cut(s) 2660
DriI GACNNNNNGTC 1 cut(s) 1751
EaeI YGGCCR 1 cut(s) 1565
Eam1104I CTCTTC 5 cut(s) 561, 612, 746, 1172, 1645
Eam1105I GACNNNNNGTC 1 cut(s) 1751
EarI CTCTTC 5 cut(s) 561, 612, 746, 1172, 1645
Ecl136II GAGCTC 1 cut(s) 561
Eco130I CCWWGG 2 cut(s) 1407, 2729
Eco24I GRGCYC 3 cut(s) 527, 539, 563
Eco31I GGTCTC 2 cut(s) 217, 862
Eco47I GGWCC 8 cut(s) 313, 349, 370, 487, 1264, 1615, 1694, 1935
Eco53kI GAGCTC 1 cut(s) 561
Eco57I CTGAAG 5 cut(s) 168, 585, 753, 953, 1193
Eco88I CYCGRG 1 cut(s) 2511
Eco91I GGTNACC 1 cut(s) 1222
EcoICRI GAGCTC 1 cut(s) 561
EcoO109I RGGNCCY 2 cut(s) 349, 1935
EcoO65I GGTNACC 1 cut(s) 1222
EcoRI GAATTC 2 cut(s) 2464, 2935
EcoRII CCWGG 7 cut(s) 958, 1099, 1702, 1973, 2396, 2829, 2872
EcoT14I CCWWGG 2 cut(s) 1407, 2729
EcoT38I GRGCYC 3 cut(s) 527, 539, 563
EgeI GGCGCC 2 cut(s) 456, 2949
EheI GGCGCC 2 cut(s) 456, 2949
ErhI CCWWGG 2 cut(s) 1407, 2729
Esp3I CGTCTC 2 cut(s) 590, 1738
FaeI CATG 9 cut(s) 820, 1411, 1576, 1694, 1808, 2051, 2812, 2934, 2961
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 8 cut(s) 335, 473, 1196, 1277, 1567, 1601, 1837, 1948
FatI CATG 9 cut(s) 816, 1407, 1572, 1690, 1804, 2047, 2808, 2930, 2957
FauI CCCGC 4 cut(s) 324, 339, 360, 501
FauNDI CATATG 1 cut(s) 939
FbaI TGATCA 1 cut(s) 429
FokI GGATG 6 cut(s) 1169, 1312, 2380, 2413, 2458, 2545
FriOI GRGCYC 3 cut(s) 527, 539, 563
FspBI CTAG 7 cut(s) 83, 125, 1313, 1511, 1664, 1670, 2730
GlaI GCGC 7 cut(s) 31, 291, 456, 503, 1416, 2084, 2949
GsaI CCCAGC 4 cut(s) 792, 855, 1059, 2205
GsuI CTGGAG 2 cut(s) 138, 942
HaeII RGCGCY 4 cut(s) 293, 458, 1418, 2951
HaeIII GGCC 4 cut(s) 89, 890, 1546, 1567
HgaI GACGC 3 cut(s) 315, 401, 1755
HhaI GCGC 7 cut(s) 32, 292, 457, 504, 1417, 2085, 2950
Hin1I GRCGYC 6 cut(s) 326, 412, 455, 599, 1747, 2948
Hin1II CATG 9 cut(s) 820, 1411, 1576, 1694, 1808, 2051, 2812, 2934, 2961
Hin6I GCGC 7 cut(s) 30, 290, 455, 502, 1415, 2083, 2948
HinP1I GCGC 7 cut(s) 30, 290, 455, 502, 1415, 2083, 2948
HincII GTYRAC 1 cut(s) 1248
HindII GTYRAC 1 cut(s) 1248
HindIII AAGCTT 5 cut(s) 137, 246, 765, 1269, 1353
Hpy166II GTNNAC 3 cut(s) 736, 1248, 2716
Hpy8I GTNNAC 3 cut(s) 736, 1248, 2716
Hpy99I CGWCG 6 cut(s) 299, 331, 417, 544, 559, 2565
HpyCH4III ACNGT 5 cut(s) 740, 1277, 2423, 2458, 2944
HpyCH4IV ACGT 4 cut(s) 599, 706, 2560, 2915
HpySE526I ACGT 4 cut(s) 599, 706, 2560, 2915
Hsp92I GRCGYC 6 cut(s) 326, 412, 455, 599, 1747, 2948
Hsp92II CATG 9 cut(s) 820, 1411, 1576, 1694, 1808, 2051, 2812, 2934, 2961
HspAI GCGC 7 cut(s) 30, 290, 455, 502, 1415, 2083, 2948
KasI GGCGCC 2 cut(s) 454, 2947
KflI GGGWCCC 2 cut(s) 349, 1935
Ksp22I TGATCA 1 cut(s) 429
Kzo9I GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
LmnI GCTCC 8 cut(s) 157, 375, 387, 534, 961, 1147, 1724, 2390
LweI GCATC 7 cut(s) 1335, 1891, 1984, 2062, 2336, 2402, 2587
MabI ACCWGGT 1 cut(s) 2872
MaeI CTAG 7 cut(s) 83, 125, 1313, 1511, 1664, 1670, 2730
MaeII ACGT 4 cut(s) 599, 706, 2560, 2915
MalI GATC 8 cut(s) 431, 902, 1668, 2274, 2603, 2672, 2727, 2793
MboI GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
MflI RGATCY 3 cut(s) 1666, 2725, 2791
MhlI GDGCHC 7 cut(s) 99, 500, 527, 539, 563, 738, 2028
MlsI TGGCCA 1 cut(s) 1567
MluNI TGGCCA 1 cut(s) 1567
Mly113I GGCGCC 2 cut(s) 455, 2948
MlyI GAGTC 7 cut(s) 538, 694, 1072, 2111, 2123, 2167, 2329
MmeI TCCRAC 2 cut(s) 291, 309
Mox20I TGGCCA 1 cut(s) 1567
MroXI GAANNNNTTC 1 cut(s) 2152
MscI TGGCCA 1 cut(s) 1567
MseI TTAA 8 cut(s) 681, 762, 822, 1143, 1389, 1728, 2244, 2918
MslI CAYNNNNRTG 4 cut(s) 104, 1090, 1561, 2444
Msp20I TGGCCA 1 cut(s) 1567
MspA1I CMGCKG 2 cut(s) 1451, 2432
MspR9I CCNGG 9 cut(s) 443, 892, 960, 1101, 1704, 1975, 2398, 2831, 2874
Mva1269I GAATGC 1 cut(s) 231
MvaI CCWGG 7 cut(s) 960, 1101, 1704, 1975, 2398, 2831, 2874
MvnI CGCG 3 cut(s) 409, 502, 2083
NarI GGCGCC 2 cut(s) 455, 2948
NciI CCSGG 2 cut(s) 443, 892
NcoI CCATGG 1 cut(s) 1407
NdeI CATATG 1 cut(s) 939
NdeII GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
NlaIII CATG 9 cut(s) 820, 1411, 1576, 1694, 1808, 2051, 2812, 2934, 2961
NmeAIII GCCGAG 1 cut(s) 2322
NmuCI GTSAC 5 cut(s) 1222, 1780, 2185, 2332, 2779
NspI RCATGY 1 cut(s) 820
NspV TTCGAA 2 cut(s) 175, 1335
OliI CACNNNNGTG 1 cut(s) 1090
PaeR7I CTCGAG 1 cut(s) 2511
PciI ACATGT 1 cut(s) 816
PctI GAATGC 1 cut(s) 231
PdmI GAANNNNTTC 1 cut(s) 2152
PfeI GAWTC 6 cut(s) 177, 424, 550, 649, 1190, 1916
PflFI GACNNNGTC 1 cut(s) 325
PleI GAGTC 7 cut(s) 538, 693, 1072, 2111, 2123, 2167, 2329
PluTI GGCGCC 2 cut(s) 458, 2951
PpsI GAGTC 7 cut(s) 538, 693, 1072, 2111, 2123, 2167, 2329
PpuMI RGGWCCY 2 cut(s) 349, 1935
PscI ACATGT 1 cut(s) 816
PsiI TTATAA 1 cut(s) 2223
Psp124BI GAGCTC 1 cut(s) 563
Psp5II RGGWCCY 2 cut(s) 349, 1935
Psp6I CCWGG 7 cut(s) 958, 1099, 1702, 1973, 2396, 2829, 2872
PspEI GGTNACC 1 cut(s) 1222
PspFI CCCAGC 4 cut(s) 788, 851, 1055, 2201
PspGI CCWGG 7 cut(s) 958, 1099, 1702, 1973, 2396, 2829, 2872
PspPI GGNCC 9 cut(s) 313, 349, 370, 487, 889, 1264, 1615, 1694, 1935
PspPPI RGGWCCY 2 cut(s) 349, 1935
PspXI VCTCGAGB 1 cut(s) 2511
PsrI GAACNNNNNNTAC 2 cut(s) 2541, 2573
PstI CTGCAG 2 cut(s) 47, 2653
PstNI CAGNNNCTG 2 cut(s) 2618, 2645
PsuI RGATCY 3 cut(s) 1666, 2725, 2791
PsyI GACNNNGTC 1 cut(s) 325
PvuII CAGCTG 1 cut(s) 1451
RsaI GTAC 6 cut(s) 11, 305, 1395, 1436, 1458, 1821
RsaNI GTAC 6 cut(s) 10, 304, 1394, 1435, 1457, 1820
RseI CAYNNNNRTG 4 cut(s) 104, 1090, 1561, 2444
Rsr2I CGGWCCG 1 cut(s) 370
RsrII CGGWCCG 1 cut(s) 370
SacI GAGCTC 1 cut(s) 563
SaqAI TTAA 8 cut(s) 681, 762, 822, 1143, 1389, 1728, 2244, 2918
Sau3AI GATC 8 cut(s) 429, 900, 1666, 2272, 2601, 2670, 2725, 2791
Sau96I GGNCC 9 cut(s) 313, 349, 370, 487, 889, 1264, 1615, 1694, 1935
ScaI AGTACT 2 cut(s) 11, 305
SchI GAGTC 7 cut(s) 538, 694, 1072, 2111, 2123, 2167, 2329
ScrFI CCNGG 9 cut(s) 443, 892, 960, 1101, 1704, 1975, 2398, 2831, 2874
SduI GDGCHC 7 cut(s) 99, 500, 527, 539, 563, 738, 2028
SexAI ACCWGGT 1 cut(s) 2872
SfaNI GCATC 7 cut(s) 1335, 1891, 1984, 2062, 2336, 2402, 2587
SfcI CTRYAG 2 cut(s) 43, 2649
SfoI GGCGCC 2 cut(s) 456, 2949
Sfr274I CTCGAG 1 cut(s) 2511
SfuI TTCGAA 2 cut(s) 175, 1335
SinI GGWCC 8 cut(s) 313, 349, 370, 487, 1264, 1615, 1694, 1935
SlaI CTCGAG 1 cut(s) 2511
SmiMI CAYNNNNRTG 4 cut(s) 104, 1090, 1561, 2444
SmlI CTYRAG 5 cut(s) 1019, 1708, 1815, 2017, 2511
SmoI CTYRAG 5 cut(s) 1019, 1708, 1815, 2017, 2511
SspDI GGCGCC 2 cut(s) 454, 2947
SspI AATATT 2 cut(s) 2287, 2472
SspMI CTAG 7 cut(s) 83, 125, 1313, 1511, 1664, 1670, 2730
SstI GAGCTC 1 cut(s) 563
StyD4I CCNGG 9 cut(s) 441, 890, 958, 1099, 1702, 1973, 2396, 2829, 2872
StyI CCWWGG 2 cut(s) 1407, 2729
TaaI ACNGT 5 cut(s) 740, 1277, 2423, 2458, 2944
TaiI ACGT 4 cut(s) 602, 709, 2563, 2918
TaqI TCGA 7 cut(s) 175, 294, 557, 652, 1335, 2512, 2563
TaqII GACCGA 1 cut(s) 450
TatI WGTACW 3 cut(s) 9, 303, 1434
TauI GCSGC 3 cut(s) 412, 641, 988
TfiI GAWTC 6 cut(s) 177, 424, 550, 649, 1190, 1916
Tru1I TTAA 8 cut(s) 681, 762, 822, 1143, 1389, 1728, 2244, 2918
Tru9I TTAA 8 cut(s) 681, 762, 822, 1143, 1389, 1728, 2244, 2918
TscAI CASTG 5 cut(s) 484, 745, 777, 2805, 2949
TseFI GTSAC 5 cut(s) 1222, 1780, 2185, 2332, 2779
Tsp45I GTSAC 5 cut(s) 1222, 1780, 2185, 2332, 2779
TspGWI ACGGA 2 cut(s) 543, 2375
TspRI CASTG 5 cut(s) 484, 745, 777, 2805, 2949
Tth111I GACNNNGTC 1 cut(s) 325
VneI GTGCAC 1 cut(s) 734
VpaK11BI GGWCC 8 cut(s) 313, 349, 370, 487, 1264, 1615, 1694, 1935
XapI RAATTY 5 cut(s) 363, 1536, 2464, 2841, 2935
XceI RCATGY 1 cut(s) 820
XcmI CCANNNNNNNNNTGG 2 cut(s) 1089, 2223
XhoI CTCGAG 1 cut(s) 2511
XmaJI CCTAGG 1 cut(s) 2729
XmnI GAANNNNTTC 1 cut(s) 2152
XspI CTAG 7 cut(s) 83, 125, 1313, 1511, 1664, 1670, 2730
ZraI GACGTC 1 cut(s) 600
ZrmI AGTACT 2 cut(s) 11, 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.