Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001779

Physical Location & Seq

Genomic Coordinates Forward (+)

34570908 .. 34573835

Gene Structure 2928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG283900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGACGAAGTACTTGGAGAAGAAGCAAAGCGCAGAAAAAAGCTGCAGCAGCACTCTGCAAACTCTCGCCATTTGTTCTTCCCTAGAGGCCACAGAGCACATAGGAGTGGGTTGTTTCTATGAGCTAGACCACTCCAAGCTTCCTCCTGAAGCTCCAGAGCAGCTCAACTCTATTCGAATCGTTATGGTGAGCAAGAAGGCTTTGTTCAAGGTCTCGGTGAGGTTTCCGAGCATTCACTCTCTGCAAGCTTTTCTGAGCGAGAATGGGAATGTCAAGAACCAGCTTCCGGCGCTCGACGAGAAGTACTCGTTGGACCCGCAGACGGCGTCGGAGGTGCTTTACCGGCGGGTTCCGCCGGAGGAAATTTCGGACCGGAGCAAGGTGTGGAGCTTCTGGGCGGTGATTACGCGGCGTCGTTTGGAGAATCTGATCAGAGTTAGCCCGGTGAAGAAGGCGCCTCGGTCTGAGATTAGTCTCAGTGGGTTGGTCCCGTGGGGCACGCGCAAGCGGGTTCGGTTCCTGAGCCCCAATCGGAGCCCGACGACTCCGATTCCGTCGAGCTCTGAAGAGAAGGAGATTGAGGGAGGTGGTGATGAGACGTCTGAGGAGGAAGAAGAAGAGGGTGAGCCGAATGTGGTGGCGGTGAAGAATCGAAGGAGTGAAAGAAGAAAGCAGCCCATTAAGAGTCAGAAGAAGAAGCCCAAACGTCAAGAACAGAGTAAGCAGATTGTGGTGCACAATGGGAGTGAGAAGAGAATGGTTAAAGCTTCAGTGGCAAGATGGTCTGCTGGGAGGTATAAGTTGGCAGAGGAGAACATGTTTAAGGTAATGAAGGCAAGGGGGGCTACTGCTGGGAACCCAATAAGGAGACCGGCTCTGAGAAATGAGGCCCGGAAGTCGATCGGCGACACGGGTTTGATTGACCATTTGCTGAAGCATATGGCTGGCAAGGTGGCTCCAGGTGGGGTTGATAGGTTTCGGAGGCGGCACAATGCTGATGGGGCAATGGAGTATTGGCTTGAGAGTGCTGATTTGGTTGAGATAAGGAAGGAGGCTGGGGTTGAAGACCCTTATTGGACTCCACCACAGGGGTGGAAGCCTGGTGATGACCCTACCCAAGACCCAACTTGTGCAGCAATGTTTAAGGAGCTGTGGGATGAGATAGCTAATCTGAAGAAGAGGGACGAGGAATCCAAGCAGCCAGAGCAGGGTTTAGCTATGGTGACCACCACCTCAAACTCTTGGTTGACAAGTATGGACTGGGACCAAGCTTACAGTTCAGTCATTCAGCTAAAGGACAAATATACACAACTAGCTGTCAGGACATCCAAGTTCGAAGAACAGATGCAGCAAGCTTCTCAAACCTTGTCTGGAATGGAGGAAGAAATTAAGGTACTGAAATCAACCATGGAAGCACCAGCAGCACCACTTATGTACTACGCAGAAGCAGCTGATGTACCACAACTGACAGACAATGAAAGAGGGGCAAAAGAGGACAAGGCAACAAAGCTAGAGAGACTGAGGAGTGGCTTCAAAATTTGCAGGCCACAGGGGACATTTCTGTGGCCAAACATGAACCTGTCTATGTCTCAACACAAAATTGACCAGTCTGCGGTCCCAACCACACCCTCTGTTACCTCTTCCACAAGACCAGCAACCCAACTAGATCTAGTCCTTACTCAGTCTCCACATGGACCCAATCCAGGCTCAAGCTCAGGCTCCCTTGTTAAGCCATTTGCTGAGAGACGCCCAGTCAATACATCAACTCTGTTACGCAATGTGACTAACCCACCCTCTCTTTCTCATGCTTTTACTCAAGTACCATCTGAGATTGAGAAGACTACCTCCCAGTCCCAGAGTGCCAAGACCCTTCAAATAAACCTCAATGAGATACCTGTTGATGCCCAACACAATGAATCTACTGCAATTTCTGGGACCCTTACCTACCAGAGAAGACATCAACTGATGAACGCCAGGAAAGAGAACAATGCAGATGCAAGGAAGGATAATATGAGCTTGAGAGGGCACTCCAAGTCTAAGCAGCAGCATGAGCATCGTCAGCAAAGGTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

AA_kinase

Protein Analysis

690

Amino Acids

77.67

Weight (kDa)

9.36

Isoelectric Point (pI)

64.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	260 - 342	2.1e-25	Winged helix-turn-helix domain in plant reproductive proteins

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51330 AT5G51330
fragaria_vesca	FvH4_1g24020 FvH4_1g24020 FvH4_7g27150 FvH4_7g27150 FvH4_7g27150 FvH4_7g27150
malus_domestica	MD01G1180700.v1.1 MD07G1251100.v1.1
prunus_persica	Prupe.2G133400_v2.0.a1 Prupe.2G133400_v2.0.a1 Prupe.2G274700_v2.0.a1
pyrus_communis	pycom01g19090
rosa_chinensis	RchiOBHm_Chr1g0373991 RchiOBHm_Chr2g0120161
rosa_laevigata	RLG00000016013 RLG00000018527 RLG00000026788
rosa_multiflora	Rmu_co8084184.1_g000001 Rmu_co8202680.1_g000001 Rmu_co8293435.1_g000001 Rmu_co8298741.1_g000001 Rmu_sc0005304.1_g000004 Rmu_sc0008322.1_g000013 Rmu_sc0015468.1_g000001 Rmu_sc0015469.1_g000002 Rmu_sc0020978.1_g000001 Rmu_sc0020979.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123660 Rroxscaffold_4G00283840 Rroxscaffold_4G00283860
rosa_rugosa	Rorug01G0380000 Rorug01G0380100 Rorug02G0227300
rosa_samantha	Rh1AG390500 Rh1BG354600 Rh1CG367700 Rh1DG385300 Rh2AG283900 Rh2BG295200 Rh2CG272600 Rh2DG044200 Rh2DG308900
rosa_wichuraiana	Rw1G034470 Rw2G003810 Rw2G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	602
AccB1I	GGYRCC	1 cut(s)	454
AccII	CGCG	2 cut(s)	409, 502
AciI	CCGC	9 cut(s)	317, 346, 353, 398, 409, 508, 641, 985, 1613
AcoI	YGGCCR	1 cut(s)	1565
AcsI	RAATTY	2 cut(s)	363, 1536
AcuI	CTGAAG	5 cut(s)	168, 585, 753, 953, 1193
AcyI	GRCGYC	5 cut(s)	326, 412, 455, 599, 1747
AfaI	GTAC	6 cut(s)	11, 305, 1395, 1436, 1458, 1821
AfiI	CCNNNNNNNGG	7 cut(s)	286, 322, 379, 1088, 1208, 1612, 1703
AflIII	ACRYGT	1 cut(s)	816
AgsI	TTSAA	4 cut(s)	208, 1064, 1534, 1874
AhdI	GACNNNNNGTC	1 cut(s)	1751
AjnI	CCWGG	4 cut(s)	958, 1099, 1702, 1973
AjuI	GAANNNNNNNTTGG	2 cut(s)	293, 325
AleI	CACNNNNGTG	1 cut(s)	1090
Alw21I	GWGCWC	3 cut(s)	99, 563, 738
Alw26I	GTCTC	8 cut(s)	217, 479, 590, 862, 1510, 1593, 1689, 1738
Alw44I	GTGCAC	1 cut(s)	734
AoxI	GGCC	4 cut(s)	87, 888, 1544, 1565
ApaLI	GTGCAC	1 cut(s)	734
ApoI	RAATTY	2 cut(s)	363, 1536
AspLEI	GCGC	4 cut(s)	32, 292, 457, 504
AspS9I	GGNCC	8 cut(s)	313, 370, 487, 889, 1264, 1615, 1694, 1935
AsuC2I	CCSGG	2 cut(s)	443, 892
AsuHPI	GGTGA	9 cut(s)	199, 229, 412, 457, 602, 635, 655, 1115, 1234
AsuII	TTCGAA	2 cut(s)	175, 1335
AvaII	GGWCC	7 cut(s)	313, 370, 487, 1264, 1615, 1694, 1935
BaeGI	GKGCMC	3 cut(s)	500, 738, 2028
BaeI	ACNNNNGTAYC	2 cut(s)	1803, 1836
BalI	TGGCCA	1 cut(s)	1567
BanI	GGYRCC	1 cut(s)	454
BanII	GRGCYC	3 cut(s)	527, 539, 563
BbsI	GAAGAC	3 cut(s)	1071, 1844, 1960
Bbv12I	GWGCWC	3 cut(s)	99, 563, 738
BccI	CCATC	3 cut(s)	774, 992, 1831
BceAI	ACGGC	1 cut(s)	339
BcgI	CGANNNNNNTGC	2 cut(s)	2036, 2070
BciT130I	CCWGG	4 cut(s)	960, 1101, 1704, 1975
BclI	TGATCA	1 cut(s)	429
BcnI	CCSGG	2 cut(s)	443, 892
BcoDI	GTCTC	8 cut(s)	217, 479, 590, 862, 1510, 1593, 1689, 1738
BfaI	CTAG	6 cut(s)	83, 125, 1313, 1511, 1664, 1670
BfmI	CTRYAG	1 cut(s)	43
BfoI	RGCGCY	2 cut(s)	293, 458
BglII	AGATCT	1 cut(s)	1666
BmcAI	AGTACT	2 cut(s)	11, 305
Bme1390I	CCNGG	6 cut(s)	443, 892, 960, 1101, 1704, 1975
Bme18I	GGWCC	7 cut(s)	313, 370, 487, 1264, 1615, 1694, 1935
BmeRI	GACNNNNNGTC	1 cut(s)	1751
BmgT120I	GGNCC	8 cut(s)	313, 370, 487, 889, 1264, 1615, 1694, 1935
BmrFI	CCNGG	6 cut(s)	443, 892, 960, 1101, 1704, 1975
BmrI	ACTGGG	3 cut(s)	1270, 1745, 1843
BmsI	GCATC	4 cut(s)	1335, 1891, 1984, 2062
BmuI	ACTGGG	3 cut(s)	1270, 1745, 1843
BpiI	GAAGAC	3 cut(s)	1071, 1844, 1960
BplI	GAGNNNNNCTC	4 cut(s)	290, 322, 859, 891
BpmI	CTGGAG	2 cut(s)	138, 942
Bpu10I	CCTNAGC	2 cut(s)	521, 1714
Bpu14I	TTCGAA	2 cut(s)	175, 1335
BpuEI	CTTGAG	4 cut(s)	1040, 1693, 1800, 2038
BpuMI	CCSGG	2 cut(s)	443, 892
BsaHI	GRCGYC	5 cut(s)	326, 412, 455, 599, 1747
BsaI	GGTCTC	2 cut(s)	217, 862
BsaJI	CCNNGG	3 cut(s)	458, 491, 1407
BsaWI	WCCGGW	1 cut(s)	372
BsaXI	ACNNNNNCTCC	4 cut(s)	803, 833, 1669, 1699
Bsc4I	CCNNNNNNNGG	7 cut(s)	286, 322, 379, 1088, 1208, 1612, 1703
Bse118I	RCCGGY	2 cut(s)	342, 871
Bse1I	ACTGG	4 cut(s)	1265, 1606, 1751, 1849
Bse3DI	GCAATG	3 cut(s)	1011, 1143, 1783
BseBI	CCWGG	4 cut(s)	960, 1101, 1704, 1975
BseDI	CCNNGG	3 cut(s)	458, 491, 1407
BseGI	GGATG	2 cut(s)	1162, 1325
BseLI	CCNNNNNNNGG	7 cut(s)	286, 322, 379, 1088, 1208, 1612, 1703
BseMI	GCAATG	3 cut(s)	1011, 1143, 1783
BseNI	ACTGG	4 cut(s)	1265, 1606, 1751, 1849
BseRI	GAGGAG	3 cut(s)	620, 824, 1537
BseSI	GKGCMC	3 cut(s)	500, 738, 2028
BseYI	CCCAGC	3 cut(s)	788, 851, 1055
BsgI	GTGCAG	1 cut(s)	1152
Bsh1236I	CGCG	2 cut(s)	409, 502
Bsh1285I	CGRYCG	1 cut(s)	903
BshFI	GGCC	4 cut(s)	89, 890, 1546, 1567
BshNI	GGYRCC	1 cut(s)	454
BsiEI	CGRYCG	1 cut(s)	903
BsiHKAI	GWGCWC	3 cut(s)	99, 563, 738
BsiSI	CCGG	7 cut(s)	287, 343, 356, 373, 443, 872, 892
BslFI	GGGAC	7 cut(s)	473, 1196, 1277, 1567, 1601, 1837, 1948
BslI	CCNNNNNNNGG	7 cut(s)	286, 322, 379, 1088, 1208, 1612, 1703
BsmAI	GTCTC	8 cut(s)	217, 479, 590, 862, 1510, 1593, 1689, 1738
BsmBI	CGTCTC	2 cut(s)	590, 1738
BsmFI	GGGAC	7 cut(s)	473, 1196, 1277, 1567, 1601, 1837, 1948
BsmI	GAATGC	1 cut(s)	231
BsnI	GGCC	4 cut(s)	89, 890, 1546, 1567
Bso31I	GGTCTC	2 cut(s)	217, 862
Bsp119I	TTCGAA	2 cut(s)	175, 1335
Bsp1286I	GDGCHC	7 cut(s)	99, 500, 527, 539, 563, 738, 2028
Bsp143I	GATC	3 cut(s)	429, 900, 1666
Bsp19I	CCATGG	1 cut(s)	1407
BspACI	CCGC	9 cut(s)	317, 346, 353, 398, 409, 508, 641, 985, 1613
BspANI	GGCC	4 cut(s)	89, 890, 1546, 1567
BspFNI	CGCG	2 cut(s)	409, 502
BspMAI	CTGCAG	1 cut(s)	47
BspT104I	TTCGAA	2 cut(s)	175, 1335
BspT107I	GGYRCC	1 cut(s)	454
BspTNI	GGTCTC	2 cut(s)	217, 862
BsrDI	GCAATG	3 cut(s)	1011, 1143, 1783
BsrFI	RCCGGY	2 cut(s)	342, 871
BsrI	ACTGG	4 cut(s)	1265, 1606, 1751, 1849
BssAI	RCCGGY	2 cut(s)	342, 871
BssECI	CCNNGG	3 cut(s)	458, 491, 1407
BssMI	GATC	3 cut(s)	429, 900, 1666
BssNI	GRCGYC	5 cut(s)	326, 412, 455, 599, 1747
BssT1I	CCWWGG	1 cut(s)	1407
Bst2UI	CCWGG	4 cut(s)	960, 1101, 1704, 1975
Bst4CI	ACNGT	1 cut(s)	1277
Bst6I	CTCTTC	5 cut(s)	561, 612, 746, 1172, 1645
BstACI	GRCGYC	5 cut(s)	326, 412, 455, 599, 1747
BstBI	TTCGAA	2 cut(s)	175, 1335
BstC8I	GCNNGC	6 cut(s)	246, 500, 506, 946, 1353, 1544
BstDSI	CCRYGG	2 cut(s)	491, 1407
BstEII	GGTNACC	1 cut(s)	1222
BstF5I	GGATG	2 cut(s)	1162, 1325
BstFNI	CGCG	2 cut(s)	409, 502
BstH2I	RGCGCY	2 cut(s)	293, 458
BstHHI	GCGC	4 cut(s)	32, 292, 457, 504
BstKTI	GATC	3 cut(s)	432, 903, 1669
BstMAI	GTCTC	8 cut(s)	217, 479, 590, 862, 1510, 1593, 1689, 1738
BstMBI	GATC	3 cut(s)	429, 900, 1666
BstMCI	CGRYCG	1 cut(s)	903
BstNI	CCWGG	4 cut(s)	960, 1101, 1704, 1975
BstNSI	RCATGY	1 cut(s)	820
BstPI	GGTNACC	1 cut(s)	1222
BstSCI	CCNGG	6 cut(s)	441, 890, 958, 1099, 1702, 1973
BstSFI	CTRYAG	1 cut(s)	43
BstSLI	GKGCMC	3 cut(s)	500, 738, 2028
BstUI	CGCG	2 cut(s)	409, 502
BstV2I	GAAGAC	3 cut(s)	1071, 1844, 1960
BstX2I	RGATCY	1 cut(s)	1666
BstXI	CCANNNNNNTGG	1 cut(s)	1092
BstYI	RGATCY	1 cut(s)	1666
BsuRI	GGCC	4 cut(s)	89, 890, 1546, 1567
BtgI	CCRYGG	2 cut(s)	491, 1407
BtsCI	GGATG	2 cut(s)	1162, 1325
BtsIMutI	CAGTG	2 cut(s)	484, 777
Cac8I	GCNNGC	6 cut(s)	246, 500, 506, 946, 1353, 1544
CfoI	GCGC	4 cut(s)	32, 292, 457, 504
Cfr10I	RCCGGY	2 cut(s)	342, 871
Cfr13I	GGNCC	8 cut(s)	313, 370, 487, 889, 1264, 1615, 1694, 1935
CpoI	CGGWCCG	1 cut(s)	370
CseI	GACGC	3 cut(s)	315, 401, 1755
Csp6I	GTAC	6 cut(s)	10, 304, 1394, 1435, 1457, 1820
CspI	CGGWCCG	1 cut(s)	370
CviAII	CATG	6 cut(s)	817, 1408, 1573, 1691, 1805, 2048
CviQI	GTAC	6 cut(s)	10, 304, 1394, 1435, 1457, 1820
DinI	GGCGCC	1 cut(s)	456
DpnI	GATC	3 cut(s)	431, 902, 1668
DpnII	GATC	3 cut(s)	429, 900, 1666
DriI	GACNNNNNGTC	1 cut(s)	1751
EaeI	YGGCCR	1 cut(s)	1565
Eam1104I	CTCTTC	5 cut(s)	561, 612, 746, 1172, 1645
Eam1105I	GACNNNNNGTC	1 cut(s)	1751
EarI	CTCTTC	5 cut(s)	561, 612, 746, 1172, 1645
EciI	GGCGGA	1 cut(s)	342
Ecl136II	GAGCTC	1 cut(s)	561
Eco130I	CCWWGG	1 cut(s)	1407
Eco24I	GRGCYC	3 cut(s)	527, 539, 563
Eco31I	GGTCTC	2 cut(s)	217, 862
Eco47I	GGWCC	7 cut(s)	313, 370, 487, 1264, 1615, 1694, 1935
Eco53kI	GAGCTC	1 cut(s)	561
Eco57I	CTGAAG	5 cut(s)	168, 585, 753, 953, 1193
Eco91I	GGTNACC	1 cut(s)	1222
EcoICRI	GAGCTC	1 cut(s)	561
EcoO109I	RGGNCCY	1 cut(s)	1935
EcoO65I	GGTNACC	1 cut(s)	1222
EcoRII	CCWGG	4 cut(s)	958, 1099, 1702, 1973
EcoT14I	CCWWGG	1 cut(s)	1407
EcoT38I	GRGCYC	3 cut(s)	527, 539, 563
EgeI	GGCGCC	1 cut(s)	456
EheI	GGCGCC	1 cut(s)	456
ErhI	CCWWGG	1 cut(s)	1407
Esp3I	CGTCTC	2 cut(s)	590, 1738
FaeI	CATG	6 cut(s)	820, 1411, 1576, 1694, 1808, 2051
FaqI	GGGAC	7 cut(s)	473, 1196, 1277, 1567, 1601, 1837, 1948
FatI	CATG	6 cut(s)	816, 1407, 1572, 1690, 1804, 2047
FauI	CCCGC	3 cut(s)	324, 339, 501
FauNDI	CATATG	1 cut(s)	939
FbaI	TGATCA	1 cut(s)	429
FokI	GGATG	2 cut(s)	1169, 1312
FriOI	GRGCYC	3 cut(s)	527, 539, 563
FspBI	CTAG	6 cut(s)	83, 125, 1313, 1511, 1664, 1670
GlaI	GCGC	4 cut(s)	31, 291, 456, 503
GsaI	CCCAGC	3 cut(s)	792, 855, 1059
GsuI	CTGGAG	2 cut(s)	138, 942
HaeII	RGCGCY	2 cut(s)	293, 458
HaeIII	GGCC	4 cut(s)	89, 890, 1546, 1567
HapII	CCGG	7 cut(s)	287, 343, 356, 373, 443, 872, 892
HgaI	GACGC	3 cut(s)	315, 401, 1755
HhaI	GCGC	4 cut(s)	32, 292, 457, 504
Hin1I	GRCGYC	5 cut(s)	326, 412, 455, 599, 1747
Hin1II	CATG	6 cut(s)	820, 1411, 1576, 1694, 1808, 2051
Hin6I	GCGC	4 cut(s)	30, 290, 455, 502
HinP1I	GCGC	4 cut(s)	30, 290, 455, 502
HincII	GTYRAC	1 cut(s)	1248
HindII	GTYRAC	1 cut(s)	1248
HindIII	AAGCTT	5 cut(s)	137, 246, 765, 1269, 1353
HinfI	GANTC	9 cut(s)	177, 424, 544, 550, 649, 685, 1078, 1190, 1916
HpaII	CCGG	7 cut(s)	287, 343, 356, 373, 443, 872, 892
HphI	GGTGA	9 cut(s)	199, 229, 412, 457, 602, 635, 655, 1115, 1234
Hpy166II	GTNNAC	2 cut(s)	736, 1248
Hpy188III	TCNNGA	7 cut(s)	146, 155, 274, 520, 710, 1321, 1371
Hpy8I	GTNNAC	2 cut(s)	736, 1248
Hpy99I	CGWCG	5 cut(s)	299, 331, 417, 544, 559
HpyAV	CCTTC	8 cut(s)	190, 445, 565, 648, 826, 1042, 1880, 1996
HpyCH4III	ACNGT	1 cut(s)	1277
HpyCH4IV	ACGT	2 cut(s)	599, 706
HpySE526I	ACGT	2 cut(s)	599, 706
Hsp92I	GRCGYC	5 cut(s)	326, 412, 455, 599, 1747
Hsp92II	CATG	6 cut(s)	820, 1411, 1576, 1694, 1808, 2051
HspAI	GCGC	4 cut(s)	30, 290, 455, 502
KasI	GGCGCC	1 cut(s)	454
KflI	GGGWCCC	1 cut(s)	1935
Ksp22I	TGATCA	1 cut(s)	429
Kzo9I	GATC	3 cut(s)	429, 900, 1666
LmnI	GCTCC	7 cut(s)	157, 375, 387, 534, 961, 1147, 1724
LweI	GCATC	4 cut(s)	1335, 1891, 1984, 2062
MaeI	CTAG	6 cut(s)	83, 125, 1313, 1511, 1664, 1670
MaeII	ACGT	2 cut(s)	599, 706
MaeIII	GTNAC	4 cut(s)	1222, 1633, 1770, 1780
MalI	GATC	3 cut(s)	431, 902, 1668
MboI	GATC	3 cut(s)	429, 900, 1666
MflI	RGATCY	1 cut(s)	1666
MhlI	GDGCHC	7 cut(s)	99, 500, 527, 539, 563, 738, 2028
MlsI	TGGCCA	1 cut(s)	1567
MluCI	AATT	5 cut(s)	363, 1386, 1536, 1599, 1926
MluNI	TGGCCA	1 cut(s)	1567
Mly113I	GGCGCC	1 cut(s)	455
MlyI	GAGTC	3 cut(s)	538, 694, 1072
MmeI	TCCRAC	2 cut(s)	291, 309
Mox20I	TGGCCA	1 cut(s)	1567
MscI	TGGCCA	1 cut(s)	1567
MseI	TTAA	6 cut(s)	681, 762, 822, 1143, 1389, 1728
MslI	CAYNNNNRTG	3 cut(s)	104, 1090, 1561
Msp20I	TGGCCA	1 cut(s)	1567
MspA1I	CMGCKG	1 cut(s)	1451
MspI	CCGG	7 cut(s)	287, 343, 356, 373, 443, 872, 892
MspR9I	CCNGG	6 cut(s)	443, 892, 960, 1101, 1704, 1975
Mva1269I	GAATGC	1 cut(s)	231
MvaI	CCWGG	4 cut(s)	960, 1101, 1704, 1975
MvnI	CGCG	2 cut(s)	409, 502
NarI	GGCGCC	1 cut(s)	455
NciI	CCSGG	2 cut(s)	443, 892
NcoI	CCATGG	1 cut(s)	1407
NdeI	CATATG	1 cut(s)	939
NdeII	GATC	3 cut(s)	429, 900, 1666
NlaIII	CATG	6 cut(s)	820, 1411, 1576, 1694, 1808, 2051
NmuCI	GTSAC	2 cut(s)	1222, 1780
NspI	RCATGY	1 cut(s)	820
NspV	TTCGAA	2 cut(s)	175, 1335
OliI	CACNNNNGTG	1 cut(s)	1090
PciI	ACATGT	1 cut(s)	816
PctI	GAATGC	1 cut(s)	231
PfeI	GAWTC	6 cut(s)	177, 424, 550, 649, 1190, 1916
PflFI	GACNNNGTC	1 cut(s)	325
Ple19I	CGATCG	1 cut(s)	903
PleI	GAGTC	3 cut(s)	538, 693, 1072
PluTI	GGCGCC	1 cut(s)	458
PpsI	GAGTC	3 cut(s)	538, 693, 1072
PpuMI	RGGWCCY	1 cut(s)	1935
PscI	ACATGT	1 cut(s)	816
Psp124BI	GAGCTC	1 cut(s)	563
Psp5II	RGGWCCY	1 cut(s)	1935
Psp6I	CCWGG	4 cut(s)	958, 1099, 1702, 1973
PspEI	GGTNACC	1 cut(s)	1222
PspFI	CCCAGC	3 cut(s)	788, 851, 1055
PspGI	CCWGG	4 cut(s)	958, 1099, 1702, 1973
PspPI	GGNCC	8 cut(s)	313, 370, 487, 889, 1264, 1615, 1694, 1935
PspPPI	RGGWCCY	1 cut(s)	1935
PstI	CTGCAG	1 cut(s)	47
PsuI	RGATCY	1 cut(s)	1666
PsyI	GACNNNGTC	1 cut(s)	325
PvuI	CGATCG	1 cut(s)	903
PvuII	CAGCTG	1 cut(s)	1451
RsaI	GTAC	6 cut(s)	11, 305, 1395, 1436, 1458, 1821
RsaNI	GTAC	6 cut(s)	10, 304, 1394, 1435, 1457, 1820
RseI	CAYNNNNRTG	3 cut(s)	104, 1090, 1561
Rsr2I	CGGWCCG	1 cut(s)	370
RsrII	CGGWCCG	1 cut(s)	370
SacI	GAGCTC	1 cut(s)	563
SaqAI	TTAA	6 cut(s)	681, 762, 822, 1143, 1389, 1728
Sau3AI	GATC	3 cut(s)	429, 900, 1666
Sau96I	GGNCC	8 cut(s)	313, 370, 487, 889, 1264, 1615, 1694, 1935
ScaI	AGTACT	2 cut(s)	11, 305
SchI	GAGTC	3 cut(s)	538, 694, 1072
ScrFI	CCNGG	6 cut(s)	443, 892, 960, 1101, 1704, 1975
SduI	GDGCHC	7 cut(s)	99, 500, 527, 539, 563, 738, 2028
SfaNI	GCATC	4 cut(s)	1335, 1891, 1984, 2062
SfcI	CTRYAG	1 cut(s)	43
SfoI	GGCGCC	1 cut(s)	456
SfuI	TTCGAA	2 cut(s)	175, 1335
SinI	GGWCC	7 cut(s)	313, 370, 487, 1264, 1615, 1694, 1935
SmiMI	CAYNNNNRTG	3 cut(s)	104, 1090, 1561
SmlI	CTYRAG	4 cut(s)	1019, 1708, 1815, 2017
SmoI	CTYRAG	4 cut(s)	1019, 1708, 1815, 2017
Sse9I	AATT	5 cut(s)	363, 1386, 1536, 1599, 1926
SsiI	CCGC	9 cut(s)	317, 346, 353, 398, 409, 508, 641, 985, 1613
SspDI	GGCGCC	1 cut(s)	454
SspMI	CTAG	6 cut(s)	83, 125, 1313, 1511, 1664, 1670
SstI	GAGCTC	1 cut(s)	563
StyD4I	CCNGG	6 cut(s)	441, 890, 958, 1099, 1702, 1973
StyI	CCWWGG	1 cut(s)	1407
TaaI	ACNGT	1 cut(s)	1277
TaiI	ACGT	2 cut(s)	602, 709
TaqI	TCGA	6 cut(s)	175, 294, 557, 652, 899, 1335
TaqII	GACCGA	1 cut(s)	450
TasI	AATT	5 cut(s)	363, 1386, 1536, 1599, 1926
TatI	WGTACW	3 cut(s)	9, 303, 1434
TauI	GCSGC	2 cut(s)	412, 988
TfiI	GAWTC	6 cut(s)	177, 424, 550, 649, 1190, 1916
Tru1I	TTAA	6 cut(s)	681, 762, 822, 1143, 1389, 1728
Tru9I	TTAA	6 cut(s)	681, 762, 822, 1143, 1389, 1728
TscAI	CASTG	2 cut(s)	484, 777
TseFI	GTSAC	2 cut(s)	1222, 1780
Tsp45I	GTSAC	2 cut(s)	1222, 1780
TspDTI	ATGAA	5 cut(s)	845, 1491, 1589, 1929, 1982
TspGWI	ACGGA	1 cut(s)	543
TspRI	CASTG	2 cut(s)	484, 777
Tth111I	GACNNNGTC	1 cut(s)	325
VneI	GTGCAC	1 cut(s)	734
VpaK11BI	GGWCC	7 cut(s)	313, 370, 487, 1264, 1615, 1694, 1935
XapI	RAATTY	2 cut(s)	363, 1536
XceI	RCATGY	1 cut(s)	820
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1089
XspI	CTAG	6 cut(s)	83, 125, 1313, 1511, 1664, 1670
ZraI	GACGTC	1 cut(s)	600
ZrmI	AGTACT	2 cut(s)	11, 305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.