Rh1DG285600

Aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
50801778 .. 50803805
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG285600.1

Sequence Viewer

Length: 1425 bp
ATGGTGAATGAAAAGGATGTGCCAGAGAATTTGGAGTGGAGTATCAACGTGACTGATGGGACAAAACAAGTGGTAGCAGTTCCAGAACTGAGGCTAGTTAATAAGGTGTGGCTAGGATCGAAGTCTGTAGTTGGAGGTTTGATATTGAAAGTTTGGAGGTTTTTAGTGAAGGCATGGAATTTAGGAGTTGCTGAACCTAAAAAGGTTATTCATGCTGTCAAAGTTGGGTTGGCTCTTACTATTGTGTCACTTTGTTACTATATAAGGTCTTTGTATGAAGGTGTTGGAGGGAATGCTATGTGGGCAGTTATGACAGTTGTAGTAGTTTTTGAATCTTCCGTAGGTGCAACACTCTATAAAAGCATAAATAGGGTAACAGCAACTTTTCTTGCTGGATCACTTGGCTTGGGTGTGCATTGGATTTCTTACAAGGCAGAAGAAAAATTTGAGCCAATAATTATTGGAATCTCAGTATTCTTCTTAGCTTCAGCAGCAACCTTTTCTCGATTTATCCCATCTGTCAAATCCCGATTCGATTATGGTGCTCTCATATTCATCCTCACCTTCAGCTTAGTTTCAGTGTCTGGGTATCGTGTGGACGGAATATCTGAGTTGGCTTTCCAAAGACTGTCCACCATTTTCATTGGGACCTCTTTTTGCATTCTGATTAGCATTCTTTTCTATCCCACCTGGGCTGGTGCTGAGCTTCACCGTTTGATCTATCGGAACCTTGAGAAGCTGGCTGATTCCTTGGATGGATACGTCATCGAGTACTTAGACAATGAAGCTGTGGCTGAAGACTCCAATCATAATAAGGCAATCAAAGGGTACAAGTATGTGCTTGATTCAAAGGCGGCCGAAGACAATTTGGCTAAATTTGCAAGATGGGAGCCCGCACACGGCTGTTTCAACTTCCAACATCCATGGAAACAATACCTAAAGATCGGGGCATCAATTCGTAGTTCTGCATATTGCATTGAGGCTCTTAGTGGTTGCATGGATTCAGAAATTCAGGCACCGGGAATTGGGTACCTTAAGAAGCATGTAAGCAATGCCTGCAAGACAATGAACAAATCTTCTTCAGATATCTTAAGAGAACTGGCAATAACACTAAAAACCATGACAAAGTCATCTCAGATGGGTTCATTGGTTCGGGAAATGAACATTGCAGTGCAGCAACTTCAAATTTCTTTGAGATCTATACCTAACTGCCTCATTGCTCCAACATCAGAAGATACTACTGATGAACCCTTCAGAAAAACCTGCATAACACCACTAGTGGAGGTCATTCCACTGACCACTTTTGTGTCTTTGTTAATAGAAAATGCAGCAAGAATCAGTGGGATTGTTGATGCAGTCAATGAGCTAGCAGGCATGGTTGATATGAAGCATGGGAACTCAAAAGCAAAACCAACACAGGAATAA

Protein Analysis

474

Amino Acids

52.31

Weight (kDa)

8.45

Isoelectric Point (pI)

33.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 59 - 412 5.6e-139 Aluminium activated malate transporter
FUSC_2 PF13515 94 - 222 1.1e-09 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1271
Acc65I GGTACC 1 cut(s) 1029
AccB1I GGYRCC 2 cut(s) 1015, 1029
AciI CCGC 2 cut(s) 854, 894
AclWI GGATC 2 cut(s) 124, 403
AcoI YGGCCR 1 cut(s) 855
AcsI RAATTY 6 cut(s) 28, 178, 443, 875, 1008, 1185
AcuI CTGAAG 5 cut(s) 471, 550, 816, 1065, 1237
AfaI GTAC 3 cut(s) 773, 830, 1031
AfiI CCNNNNNNNGG 2 cut(s) 899, 1025
AflII CTTAAG 2 cut(s) 1034, 1090
AgsI TTSAA 5 cut(s) 148, 332, 849, 910, 1184
AhlI ACTAGT 1 cut(s) 1276
AjnI CCWGG 1 cut(s) 689
AleI CACNNNNGTG 1 cut(s) 1304
AluBI AGCT 6 cut(s) 485, 570, 706, 739, 788, 1366
AluI AGCT 6 cut(s) 485, 570, 706, 739, 788, 1366
Alw21I GWGCWC 1 cut(s) 547
AlwI GGATC 2 cut(s) 124, 403
AlwNI CAGNNNCTG 1 cut(s) 584
AoxI GGCC 1 cut(s) 855
ApeKI GCWGC 3 cut(s) 491, 1174, 1328
ApoI RAATTY 6 cut(s) 28, 178, 443, 875, 1008, 1185
Asp718I GGTACC 1 cut(s) 1029
AspS9I GGNCC 1 cut(s) 648
AsuC2I CCSGG 1 cut(s) 1020
AsuHPI GGTGA 3 cut(s) 16, 553, 701
AsuNHI GCTAGC 1 cut(s) 1366
AvaII GGWCC 1 cut(s) 648
BanI GGYRCC 2 cut(s) 1015, 1029
BanII GRGCYC 1 cut(s) 894
BbsI GAAGAC 2 cut(s) 804, 867
Bbv12I GWGCWC 1 cut(s) 547
BbvI GCAGC 3 cut(s) 503, 1186, 1340
BccI CCATC 5 cut(s) 50, 523, 749, 879, 1132
BceAI ACGGC 1 cut(s) 916
BcgI CGANNNNNNTGC 2 cut(s) 524, 558
BciT130I CCWGG 1 cut(s) 691
BciVI GTATCC 1 cut(s) 752
BcnI CCSGG 1 cut(s) 1020
BcuI ACTAGT 1 cut(s) 1276
BfaI CTAG 4 cut(s) 95, 113, 1277, 1367
BfmI CTRYAG 1 cut(s) 126
BfrI CTTAAG 2 cut(s) 1034, 1090
BfuAI ACCTGC 1 cut(s) 1271
BfuI GTATCC 1 cut(s) 752
BglII AGATCT 1 cut(s) 1196
BisI GCNGC 4 cut(s) 492, 855, 1175, 1329
BlpI GCTNAGC 1 cut(s) 702
BlsI GCNGC 4 cut(s) 493, 856, 1176, 1330
BmcAI AGTACT 1 cut(s) 773
Bme1390I CCNGG 2 cut(s) 691, 1020
Bme18I GGWCC 1 cut(s) 648
BmgT120I GGNCC 1 cut(s) 648
BmiI GGNNCC 5 cut(s) 649, 728, 891, 1017, 1031
BmrFI CCNGG 2 cut(s) 691, 1020
BmsI GCATC 2 cut(s) 959, 1342
BmtI GCTAGC 1 cut(s) 1370
BpiI GAAGAC 2 cut(s) 804, 867
Bpu1102I GCTNAGC 1 cut(s) 702
BpuEI CTTGAG 1 cut(s) 752
BpuMI CCSGG 1 cut(s) 1020
BsaJI CCNNGG 3 cut(s) 690, 750, 923
Bsc4I CCNNNNNNNGG 2 cut(s) 899, 1025
Bse1I ACTGG 1 cut(s) 1104
Bse3DI GCAATG 3 cut(s) 1057, 1164, 1215
BseBI CCWGG 1 cut(s) 691
BseDI CCNNGG 3 cut(s) 690, 750, 923
BseGI GGATG 4 cut(s) 22, 555, 760, 919
BseLI CCNNNNNNNGG 2 cut(s) 899, 1025
BseMI GCAATG 3 cut(s) 1057, 1164, 1215
BseMII CTCAG 5 cut(s) 80, 483, 600, 693, 1148
BseNI ACTGG 1 cut(s) 1104
BseX3I CGGCCG 1 cut(s) 855
BseXI GCAGC 3 cut(s) 503, 1186, 1340
BsgI GTGCAG 1 cut(s) 1193
Bsh1285I CGRYCG 1 cut(s) 858
BshFI GGCC 1 cut(s) 857
BshNI GGYRCC 2 cut(s) 1015, 1029
BsiEI CGRYCG 1 cut(s) 858
BsiHKAI GWGCWC 1 cut(s) 547
BsiSI CCGG 1 cut(s) 1019
BslFI GGGAC 2 cut(s) 73, 661
BslI CCNNNNNNNGG 2 cut(s) 899, 1025
BsmFI GGGAC 2 cut(s) 73, 661
BsmI GAATGC 3 cut(s) 298, 660, 672
BsnI GGCC 1 cut(s) 857
Bsp1286I GDGCHC 2 cut(s) 547, 894
Bsp143I GATC 5 cut(s) 116, 395, 717, 942, 1196
Bsp1720I GCTNAGC 1 cut(s) 702
Bsp19I CCATGG 1 cut(s) 923
BspACI CCGC 2 cut(s) 854, 894
BspANI GGCC 1 cut(s) 857
BspCNI CTCAG 5 cut(s) 81, 482, 601, 694, 1147
BspLI GGNNCC 5 cut(s) 649, 728, 891, 1017, 1031
BspMI ACCTGC 1 cut(s) 1271
BspOI GCTAGC 1 cut(s) 1370
BspPI GGATC 2 cut(s) 124, 403
BspT107I GGYRCC 2 cut(s) 1015, 1029
BspTI CTTAAG 2 cut(s) 1034, 1090
BsrDI GCAATG 3 cut(s) 1057, 1164, 1215
BsrI ACTGG 1 cut(s) 1104
BssECI CCNNGG 3 cut(s) 690, 750, 923
BssMI GATC 5 cut(s) 116, 395, 717, 942, 1196
BssT1I CCWWGG 2 cut(s) 750, 923
Bst2UI CCWGG 1 cut(s) 691
Bst4CI ACNGT 3 cut(s) 316, 630, 713
BstAFI CTTAAG 2 cut(s) 1034, 1090
BstAPI GCANNNNNTGC 1 cut(s) 1056
BstC8I GCNNGC 5 cut(s) 741, 894, 1057, 1368, 1372
BstDEI CTNAG 9 cut(s) 89, 469, 481, 571, 609, 702, 775, 986, 1134
BstDSI CCRYGG 1 cut(s) 923
BstF5I GGATG 4 cut(s) 22, 555, 760, 919
BstKTI GATC 5 cut(s) 119, 398, 720, 945, 1199
BstMBI GATC 5 cut(s) 116, 395, 717, 942, 1196
BstMCI CGRYCG 1 cut(s) 858
BstMWI GCNNNNNNNGC 4 cut(s) 302, 491, 878, 1056
BstNI CCWGG 1 cut(s) 691
BstNSI RCATGY 1 cut(s) 1046
BstSCI CCNGG 2 cut(s) 689, 1018
BstSFI CTRYAG 1 cut(s) 126
BstV1I GCAGC 3 cut(s) 503, 1186, 1340
BstV2I GAAGAC 2 cut(s) 804, 867
BstX2I RGATCY 1 cut(s) 1196
BstYI RGATCY 1 cut(s) 1196
BstZI CGGCCG 1 cut(s) 855
BsuI GTATCC 1 cut(s) 752
BsuRI GGCC 1 cut(s) 857
BtgI CCRYGG 1 cut(s) 923
BtsCI GGATG 4 cut(s) 22, 555, 760, 919
BtsI GCAGTG 1 cut(s) 1176
BtsIMutI CAGTG 4 cut(s) 585, 1176, 1292, 1345
BveI ACCTGC 1 cut(s) 1271
Cac8I GCNNGC 5 cut(s) 741, 894, 1057, 1368, 1372
CaiI CAGNNNCTG 1 cut(s) 584
Cfr13I GGNCC 1 cut(s) 648
Csp6I GTAC 3 cut(s) 772, 829, 1030
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviAII CATG 8 cut(s) 174, 212, 924, 997, 1043, 1120, 1375, 1391
CviQI GTAC 3 cut(s) 772, 829, 1030
DdeI CTNAG 9 cut(s) 89, 469, 481, 571, 609, 702, 775, 986, 1134
DpnI GATC 5 cut(s) 118, 397, 719, 944, 1198
DpnII GATC 5 cut(s) 116, 395, 717, 942, 1196
EaeI YGGCCR 1 cut(s) 855
EagI CGGCCG 1 cut(s) 855
EclXI CGGCCG 1 cut(s) 855
Eco130I CCWWGG 2 cut(s) 750, 923
Eco24I GRGCYC 1 cut(s) 894
Eco32I GATATC 1 cut(s) 1087
Eco47I GGWCC 1 cut(s) 648
Eco52I CGGCCG 1 cut(s) 855
Eco57I CTGAAG 5 cut(s) 471, 550, 816, 1065, 1237
EcoO109I RGGNCCY 1 cut(s) 648
EcoRII CCWGG 1 cut(s) 689
EcoRV GATATC 1 cut(s) 1087
EcoT14I CCWWGG 2 cut(s) 750, 923
EcoT38I GRGCYC 1 cut(s) 894
ErhI CCWWGG 2 cut(s) 750, 923
FaeI CATG 8 cut(s) 177, 215, 927, 1000, 1046, 1123, 1378, 1394
FaqI GGGAC 2 cut(s) 73, 661
FatI CATG 8 cut(s) 173, 211, 923, 996, 1042, 1119, 1374, 1390
FauI CCCGC 1 cut(s) 901
Fnu4HI GCNGC 4 cut(s) 492, 855, 1175, 1329
FokI GGATG 4 cut(s) 29, 542, 767, 906
FriOI GRGCYC 1 cut(s) 894
Fsp4HI GCNGC 4 cut(s) 492, 855, 1175, 1329
FspBI CTAG 4 cut(s) 95, 113, 1277, 1367
GluI GCNGC 4 cut(s) 492, 855, 1175, 1329
HaeIII GGCC 1 cut(s) 857
HapII CCGG 1 cut(s) 1019
Hin1II CATG 8 cut(s) 177, 215, 927, 1000, 1046, 1123, 1378, 1394
HinfI GANTC 8 cut(s) 332, 465, 531, 746, 800, 845, 1001, 1335
HpaII CCGG 1 cut(s) 1019
HphI GGTGA 3 cut(s) 16, 553, 701
Hpy166II GTNNAC 2 cut(s) 598, 633
Hpy188I TCNGA 8 cut(s) 610, 666, 726, 1006, 1084, 1137, 1231, 1256
Hpy188III TCNNGA 4 cut(s) 83, 504, 528, 1154
Hpy8I GTNNAC 2 cut(s) 598, 633
HpyAV CCTTC 4 cut(s) 163, 272, 574, 1261
HpyCH4III ACNGT 3 cut(s) 316, 630, 713
HpyCH4IV ACGT 2 cut(s) 48, 762
HpyF10VI GCNNNNNNNGC 4 cut(s) 302, 491, 878, 1056
HpyF3I CTNAG 9 cut(s) 89, 469, 481, 571, 609, 702, 775, 986, 1134
HpySE526I ACGT 2 cut(s) 48, 762
Hsp92II CATG 8 cut(s) 177, 215, 927, 1000, 1046, 1123, 1378, 1394
KpnI GGTACC 1 cut(s) 1033
Kzo9I GATC 5 cut(s) 116, 395, 717, 942, 1196
LmnI GCTCC 2 cut(s) 889, 1225
Lsp1109I GCAGC 3 cut(s) 503, 1186, 1340
LweI GCATC 2 cut(s) 959, 1342
MaeI CTAG 4 cut(s) 95, 113, 1277, 1367
MaeII ACGT 2 cut(s) 48, 762
MaeIII GTNAC 4 cut(s) 49, 246, 254, 373
MalI GATC 5 cut(s) 118, 397, 719, 944, 1198
MboI GATC 5 cut(s) 116, 395, 717, 942, 1196
MboII GAAGA 8 cut(s) 327, 449, 469, 809, 872, 1068, 1071, 1244
MflI RGATCY 1 cut(s) 1196
MhlI GDGCHC 2 cut(s) 547, 894
MlyI GAGTC 1 cut(s) 794
MmeI TCCRAC 4 cut(s) 112, 265, 940, 1247
MnlI CCTC 9 cut(s) 84, 128, 150, 281, 569, 661, 973, 1223, 1276
MseI TTAA 4 cut(s) 99, 1035, 1091, 1316
MslI CAYNNNNRTG 2 cut(s) 1169, 1304
MspCI CTTAAG 2 cut(s) 1034, 1090
MspI CCGG 1 cut(s) 1019
MspR9I CCNGG 2 cut(s) 691, 1020
Mva1269I GAATGC 3 cut(s) 298, 660, 672
MvaI CCWGG 1 cut(s) 691
MwoI GCNNNNNNNGC 4 cut(s) 302, 491, 878, 1056
NciI CCSGG 1 cut(s) 1020
NcoI CCATGG 1 cut(s) 923
NdeII GATC 5 cut(s) 116, 395, 717, 942, 1196
NheI GCTAGC 1 cut(s) 1366
NlaIII CATG 8 cut(s) 177, 215, 927, 1000, 1046, 1123, 1378, 1394
NlaIV GGNNCC 5 cut(s) 649, 728, 891, 1017, 1031
NmuCI GTSAC 2 cut(s) 49, 246
NspI RCATGY 1 cut(s) 1046
OliI CACNNNNGTG 1 cut(s) 1304
PctI GAATGC 3 cut(s) 298, 660, 672
PfeI GAWTC 7 cut(s) 332, 465, 531, 746, 845, 1001, 1335
PflFI GACNNNGTC 1 cut(s) 1126
PkrI GCNGC 4 cut(s) 493, 856, 1176, 1330
PleI GAGTC 1 cut(s) 794
PpsI GAGTC 1 cut(s) 794
PpuMI RGGWCCY 1 cut(s) 648
Psp5II RGGWCCY 1 cut(s) 648
Psp6I CCWGG 1 cut(s) 689
PspGI CCWGG 1 cut(s) 689
PspN4I GGNNCC 5 cut(s) 649, 728, 891, 1017, 1031
PspPI GGNCC 1 cut(s) 648
PspPPI RGGWCCY 1 cut(s) 648
PstNI CAGNNNCTG 1 cut(s) 584
PsuI RGATCY 1 cut(s) 1196
PsyI GACNNNGTC 1 cut(s) 1126
RsaI GTAC 3 cut(s) 773, 830, 1031
RsaNI GTAC 3 cut(s) 772, 829, 1030
RseI CAYNNNNRTG 2 cut(s) 1169, 1304
SaqAI TTAA 4 cut(s) 99, 1035, 1091, 1316
SatI GCNGC 4 cut(s) 492, 855, 1175, 1329
Sau3AI GATC 5 cut(s) 116, 395, 717, 942, 1196
Sau96I GGNCC 1 cut(s) 648
ScaI AGTACT 1 cut(s) 773
SchI GAGTC 1 cut(s) 794
ScrFI CCNGG 2 cut(s) 691, 1020
SduI GDGCHC 2 cut(s) 547, 894
SfaNI GCATC 2 cut(s) 959, 1342
SfcI CTRYAG 1 cut(s) 126
SinI GGWCC 1 cut(s) 648
SmiMI CAYNNNNRTG 2 cut(s) 1169, 1304
SmlI CTYRAG 3 cut(s) 731, 1034, 1090
SmoI CTYRAG 3 cut(s) 731, 1034, 1090
SpeI ACTAGT 1 cut(s) 1276
SsiI CCGC 2 cut(s) 854, 894
SspMI CTAG 4 cut(s) 95, 113, 1277, 1367
StyD4I CCNGG 2 cut(s) 689, 1018
StyI CCWWGG 2 cut(s) 750, 923
TaaI ACNGT 3 cut(s) 316, 630, 713
TaiI ACGT 2 cut(s) 51, 765
TaqI TCGA 4 cut(s) 119, 505, 534, 768
TatI WGTACW 1 cut(s) 771
TauI GCSGC 1 cut(s) 857
TfiI GAWTC 7 cut(s) 332, 465, 531, 746, 845, 1001, 1335
Tru1I TTAA 4 cut(s) 99, 1035, 1091, 1316
Tru9I TTAA 4 cut(s) 99, 1035, 1091, 1316
TscAI CASTG 4 cut(s) 585, 1176, 1299, 1345
TseFI GTSAC 2 cut(s) 49, 246
TseI GCWGC 3 cut(s) 491, 1174, 1328
Tsp45I GTSAC 2 cut(s) 49, 246
TspGWI ACGGA 2 cut(s) 328, 615
TspRI CASTG 4 cut(s) 585, 1176, 1299, 1345
Tth111I GACNNNGTC 1 cut(s) 1126
Vha464I CTTAAG 2 cut(s) 1034, 1090
VpaK11BI GGWCC 1 cut(s) 648
XapI RAATTY 6 cut(s) 28, 178, 443, 875, 1008, 1185
XceI RCATGY 1 cut(s) 1046
XspI CTAG 4 cut(s) 95, 113, 1277, 1367
ZrmI AGTACT 1 cut(s) 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.