Pentatricopeptide repeat-containing protein At5g67570
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g17890 |
| malus_domestica | MD03G1080500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0108141 RchiOBHm_Chr2g0108171 |
| rosa_laevigata | RLG00000017641 RLG00000017644 |
| rosa_multiflora | Rmu_sc0002530.1_g000014 Rmu_sc0002530.1_g000016 Rmu_sc0002530.1_g000017 Rmu_sc0007406.1_g000015 Rmu_sc0007406.1_g000017 Rmu_sc0007406.1_g000018 Rmu_sc0007406.1_g000026 Rmu_sc0014959.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00135520 Rroxscaffold_2G00135610 Rroxscaffold_2G00135620 |
| rosa_rugosa | Rorug02G0150800 |
| rosa_samantha | Rh2AG199700 Rh2BG212400 Rh2CG204100 Rh2CG204200 Rh2CG204300 Rh2CG204400 |
| rosa_wichuraiana | Rw2G015860 Rw2G015880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 127, 154, 166, 294, 366 |
| AcuI | CTGAAG | 1 cut(s) | 410 |
| AfaI | GTAC | 2 cut(s) | 96, 254 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 352 |
| AgsI | TTSAA | 1 cut(s) | 406 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 291, 323 |
| AluBI | AGCT | 4 cut(s) | 8, 261, 352, 388 |
| AluI | AGCT | 4 cut(s) | 8, 261, 352, 388 |
| AspS9I | GGNCC | 1 cut(s) | 18 |
| AsuHPI | GGTGA | 4 cut(s) | 73, 256, 308, 380 |
| AsuII | TTCGAA | 1 cut(s) | 48 |
| AvaII | GGWCC | 1 cut(s) | 18 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 245, 277 |
| BceAI | ACGGC | 1 cut(s) | 257 |
| Bme18I | GGWCC | 1 cut(s) | 18 |
| BmgT120I | GGNCC | 1 cut(s) | 18 |
| BmiI | GGNNCC | 3 cut(s) | 19, 20, 344 |
| BmsI | GCATC | 2 cut(s) | 303, 382 |
| Bpu14I | TTCGAA | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 1 cut(s) | 317 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 352 |
| BseDI | CCNNGG | 1 cut(s) | 317 |
| BseGI | GGATG | 1 cut(s) | 318 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 352 |
| BseRI | GAGGAG | 1 cut(s) | 413 |
| BslFI | GGGAC | 2 cut(s) | 4, 184 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 352 |
| BsmFI | GGGAC | 2 cut(s) | 4, 184 |
| BsmI | GAATGC | 1 cut(s) | 412 |
| Bsp119I | TTCGAA | 1 cut(s) | 48 |
| BspACI | CCGC | 5 cut(s) | 127, 154, 166, 294, 366 |
| BspLI | GGNNCC | 3 cut(s) | 19, 20, 344 |
| BspT104I | TTCGAA | 1 cut(s) | 48 |
| BssECI | CCNNGG | 1 cut(s) | 317 |
| BssT1I | CCWWGG | 1 cut(s) | 317 |
| Bst4CI | ACNGT | 2 cut(s) | 59, 307 |
| BstBI | TTCGAA | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 354 |
| BstF5I | GGATG | 1 cut(s) | 318 |
| BtsCI | GGATG | 1 cut(s) | 318 |
| BtsIMutI | CAGTG | 1 cut(s) | 64 |
| Cac8I | GCNNGC | 1 cut(s) | 354 |
| Cfr13I | GGNCC | 1 cut(s) | 18 |
| Csp6I | GTAC | 2 cut(s) | 95, 253 |
| CviJI | RGCY | 8 cut(s) | 8, 207, 212, 248, 261, 272, 352, 388 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 207, 212, 248, 261, 272, 352, 388 |
| CviQI | GTAC | 2 cut(s) | 95, 253 |
| Eco130I | CCWWGG | 1 cut(s) | 317 |
| Eco47I | GGWCC | 1 cut(s) | 18 |
| Eco57I | CTGAAG | 1 cut(s) | 410 |
| EcoO109I | RGGNCCY | 1 cut(s) | 18 |
| EcoT14I | CCWWGG | 1 cut(s) | 317 |
| ErhI | CCWWGG | 1 cut(s) | 317 |
| FaqI | GGGAC | 2 cut(s) | 4, 184 |
| FokI | GGATG | 1 cut(s) | 325 |
| HindIII | AAGCTT | 1 cut(s) | 259 |
| HinfI | GANTC | 1 cut(s) | 197 |
| HphI | GGTGA | 4 cut(s) | 73, 256, 308, 380 |
| Hpy166II | GTNNAC | 2 cut(s) | 97, 118 |
| Hpy188I | TCNGA | 3 cut(s) | 196, 220, 347 |
| Hpy188III | TCNNGA | 1 cut(s) | 142 |
| Hpy8I | GTNNAC | 2 cut(s) | 97, 118 |
| HpyAV | CCTTC | 1 cut(s) | 388 |
| HpyCH4III | ACNGT | 2 cut(s) | 59, 307 |
| HpyCH4V | TGCA | 1 cut(s) | 13 |
| KflI | GGGWCCC | 1 cut(s) | 18 |
| LpnPI | CCDG | 5 cut(s) | 66, 155, 254, 280, 338 |
| LweI | GCATC | 2 cut(s) | 303, 382 |
| MboII | GAAGA | 2 cut(s) | 233, 403 |
| MluCI | AATT | 3 cut(s) | 44, 299, 336 |
| MlyI | GAGTC | 1 cut(s) | 206 |
| MnlI | CCTC | 6 cut(s) | 32, 36, 89, 179, 198, 391 |
| Mva1269I | GAATGC | 1 cut(s) | 412 |
| NlaIV | GGNNCC | 3 cut(s) | 19, 20, 344 |
| NmeAIII | GCCGAG | 1 cut(s) | 274 |
| NspV | TTCGAA | 1 cut(s) | 48 |
| PctI | GAATGC | 1 cut(s) | 412 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| PpuMI | RGGWCCY | 1 cut(s) | 18 |
| Psp5II | RGGWCCY | 1 cut(s) | 18 |
| PspN4I | GGNNCC | 3 cut(s) | 19, 20, 344 |
| PspPI | GGNCC | 1 cut(s) | 18 |
| PspPPI | RGGWCCY | 1 cut(s) | 18 |
| RsaI | GTAC | 2 cut(s) | 96, 254 |
| RsaNI | GTAC | 2 cut(s) | 95, 253 |
| Sau96I | GGNCC | 1 cut(s) | 18 |
| SchI | GAGTC | 1 cut(s) | 206 |
| SetI | ASST | 6 cut(s) | 10, 81, 190, 263, 354, 390 |
| SfaNI | GCATC | 2 cut(s) | 303, 382 |
| SfuI | TTCGAA | 1 cut(s) | 48 |
| SinI | GGWCC | 1 cut(s) | 18 |
| Sse9I | AATT | 3 cut(s) | 44, 299, 336 |
| SsiI | CCGC | 5 cut(s) | 127, 154, 166, 294, 366 |
| StyI | CCWWGG | 1 cut(s) | 317 |
| TaaI | ACNGT | 2 cut(s) | 59, 307 |
| TaqI | TCGA | 1 cut(s) | 48 |
| TasI | AATT | 3 cut(s) | 44, 299, 336 |
| TatI | WGTACW | 1 cut(s) | 252 |
| TscAI | CASTG | 1 cut(s) | 64 |
| TspRI | CASTG | 1 cut(s) | 64 |
| VpaK11BI | GGWCC | 1 cut(s) | 18 |