Signal recognition particle receptor beta subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g17890 |
| malus_domestica | MD03G1080500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0108141 RchiOBHm_Chr2g0108171 |
| rosa_laevigata | RLG00000017641 RLG00000017644 |
| rosa_multiflora | Rmu_sc0002530.1_g000014 Rmu_sc0002530.1_g000016 Rmu_sc0002530.1_g000017 Rmu_sc0007406.1_g000015 Rmu_sc0007406.1_g000017 Rmu_sc0007406.1_g000018 Rmu_sc0007406.1_g000026 Rmu_sc0014959.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00135520 Rroxscaffold_2G00135610 Rroxscaffold_2G00135620 |
| rosa_rugosa | Rorug02G0150800 |
| rosa_samantha | Rh2AG199700 Rh2BG212400 Rh2CG204100 Rh2CG204200 Rh2CG204300 Rh2CG204400 |
| rosa_wichuraiana | Rw2G015860 Rw2G015880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 261 |
| AciI | CCGC | 1 cut(s) | 54 |
| AcuI | CTGAAG | 1 cut(s) | 98 |
| AfaI | GTAC | 1 cut(s) | 121 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 40 |
| AgsI | TTSAA | 1 cut(s) | 94 |
| AjnI | CCWGG | 1 cut(s) | 302 |
| AluBI | AGCT | 3 cut(s) | 40, 76, 148 |
| AluI | AGCT | 3 cut(s) | 40, 76, 148 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 199 |
| AsuHPI | GGTGA | 1 cut(s) | 68 |
| BciT130I | CCWGG | 1 cut(s) | 304 |
| Bme1390I | CCNGG | 1 cut(s) | 304 |
| BmiI | GGNNCC | 2 cut(s) | 32, 296 |
| BmrFI | CCNGG | 1 cut(s) | 304 |
| BsaJI | CCNNGG | 1 cut(s) | 5 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 40 |
| Bse1I | ACTGG | 1 cut(s) | 146 |
| Bse3DI | GCAATG | 1 cut(s) | 138 |
| BseBI | CCWGG | 1 cut(s) | 304 |
| BseDI | CCNNGG | 1 cut(s) | 5 |
| BseGI | GGATG | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 40 |
| BseMI | GCAATG | 1 cut(s) | 138 |
| BseMII | CTCAG | 1 cut(s) | 177 |
| BseNI | ACTGG | 1 cut(s) | 146 |
| BseRI | GAGGAG | 1 cut(s) | 101 |
| BslFI | GGGAC | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 40 |
| BsmFI | GGGAC | 1 cut(s) | 152 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| BspACI | CCGC | 1 cut(s) | 54 |
| BspCNI | CTCAG | 1 cut(s) | 178 |
| BspLI | GGNNCC | 2 cut(s) | 32, 296 |
| BsrDI | GCAATG | 1 cut(s) | 138 |
| BsrI | ACTGG | 1 cut(s) | 146 |
| BssECI | CCNNGG | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 1 cut(s) | 5 |
| Bst2UI | CCWGG | 1 cut(s) | 304 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 3 cut(s) | 113, 186, 216 |
| BstF5I | GGATG | 1 cut(s) | 162 |
| BstNI | CCWGG | 1 cut(s) | 304 |
| BstSCI | CCNGG | 1 cut(s) | 302 |
| BtsCI | GGATG | 1 cut(s) | 162 |
| BtsI | GCAGTG | 1 cut(s) | 280 |
| BtsIMutI | CAGTG | 2 cut(s) | 183, 280 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| CaiI | CAGNNNCTG | 1 cut(s) | 199 |
| CsiI | ACCWGGT | 1 cut(s) | 302 |
| Csp6I | GTAC | 1 cut(s) | 120 |
| CviJI | RGCY | 4 cut(s) | 40, 76, 148, 297 |
| CviKI_1 | RGCY | 4 cut(s) | 40, 76, 148, 297 |
| CviQI | GTAC | 1 cut(s) | 120 |
| DdeI | CTNAG | 3 cut(s) | 113, 186, 216 |
| Eco130I | CCWWGG | 1 cut(s) | 5 |
| Eco57I | CTGAAG | 1 cut(s) | 98 |
| EcoRII | CCWGG | 1 cut(s) | 302 |
| EcoT14I | CCWWGG | 1 cut(s) | 5 |
| EcoT22I | ATGCAT | 1 cut(s) | 100 |
| ErhI | CCWWGG | 1 cut(s) | 5 |
| FaiI | YATR | 3 cut(s) | 63, 261, 300 |
| FaqI | GGGAC | 1 cut(s) | 152 |
| FokI | GGATG | 1 cut(s) | 169 |
| HindIII | AAGCTT | 1 cut(s) | 146 |
| HphI | GGTGA | 1 cut(s) | 68 |
| Hpy166II | GTNNAC | 1 cut(s) | 183 |
| Hpy188I | TCNGA | 2 cut(s) | 35, 201 |
| Hpy8I | GTNNAC | 1 cut(s) | 183 |
| HpyAV | CCTTC | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 3 cut(s) | 98, 131, 285 |
| HpyF3I | CTNAG | 3 cut(s) | 113, 186, 216 |
| LmnI | GCTCC | 1 cut(s) | 294 |
| LpnPI | CCDG | 7 cut(s) | 26, 127, 156, 179, 218, 277, 289 |
| MabI | ACCWGGT | 1 cut(s) | 302 |
| MboII | GAAGA | 1 cut(s) | 91 |
| MluCI | AATT | 1 cut(s) | 24 |
| MmeI | TCCRAC | 1 cut(s) | 206 |
| MnlI | CCTC | 5 cut(s) | 79, 96, 129, 147, 181 |
| Mph1103I | ATGCAT | 1 cut(s) | 100 |
| MspR9I | CCNGG | 1 cut(s) | 304 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| MvaI | CCWGG | 1 cut(s) | 304 |
| NlaIV | GGNNCC | 2 cut(s) | 32, 296 |
| NsiI | ATGCAT | 1 cut(s) | 100 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PsiI | TTATAA | 1 cut(s) | 261 |
| Psp6I | CCWGG | 1 cut(s) | 302 |
| PspGI | CCWGG | 1 cut(s) | 302 |
| PspN4I | GGNNCC | 2 cut(s) | 32, 296 |
| PstNI | CAGNNNCTG | 1 cut(s) | 199 |
| RsaI | GTAC | 1 cut(s) | 121 |
| RsaNI | GTAC | 1 cut(s) | 120 |
| ScrFI | CCNGG | 1 cut(s) | 304 |
| SetI | ASST | 6 cut(s) | 42, 78, 150, 175, 198, 305 |
| SexAI | ACCWGGT | 1 cut(s) | 302 |
| Sse9I | AATT | 1 cut(s) | 24 |
| SsiI | CCGC | 1 cut(s) | 54 |
| StyD4I | CCNGG | 1 cut(s) | 302 |
| StyI | CCWWGG | 1 cut(s) | 5 |
| TaqI | TCGA | 1 cut(s) | 152 |
| TasI | AATT | 1 cut(s) | 24 |
| TscAI | CASTG | 2 cut(s) | 190, 287 |
| TspDTI | ATGAA | 1 cut(s) | 176 |
| TspRI | CASTG | 2 cut(s) | 190, 287 |
| Zsp2I | ATGCAT | 1 cut(s) | 100 |