Rh2BG372200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
52056810 .. 52083110
26301 bp
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UTR
Exon/CDS
Intron
Rh2BG372200.1

Sequence Viewer

Length: 210 bp
ATGAGGCTTCTTCTCCGGCAACGACGACAAGGCCTGCGACCTCTTCATCTCGAATCGAAATCCCTAACCAGTGGCTTTCTCTTCACATTCGATCTCAACCACCACCAGAATGGCAGTGGTGTGGTTTTATCGCTTATGGGTGAGATCAGTGAGAGCGAAGAGGTGGTCGACGACCTCGGAGATGTGAACCAGAAGCTTCTCGTATCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

7.76

Weight (kDa)

5.81

Isoelectric Point (pI)

45.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 168
AluBI AGCT 1 cut(s) 196
AluI AGCT 1 cut(s) 196
AoxI GGCC 1 cut(s) 31
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
AsuHPI GGTGA 1 cut(s) 152
BfaI CTAG 1 cut(s) 208
BsaJI CCNNGG 1 cut(s) 175
Bse1I ACTGG 1 cut(s) 69
BseDI CCNNGG 1 cut(s) 175
BseNI ACTGG 1 cut(s) 69
BshFI GGCC 1 cut(s) 33
BsiSI CCGG 1 cut(s) 16
BsnI GGCC 1 cut(s) 33
Bsp143I GATC 2 cut(s) 91, 144
BspANI GGCC 1 cut(s) 33
BsrI ACTGG 1 cut(s) 69
BssECI CCNNGG 1 cut(s) 175
BssMI GATC 2 cut(s) 91, 144
Bst6I CTCTTC 3 cut(s) 48, 86, 153
BstC8I GCNNGC 1 cut(s) 35
BstKTI GATC 2 cut(s) 94, 147
BstMBI GATC 2 cut(s) 91, 144
BstXI CCANNNNNNTGG 1 cut(s) 110
BsuRI GGCC 1 cut(s) 33
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 3 cut(s) 76, 121, 154
Cac8I GCNNGC 1 cut(s) 35
CviJI RGCY 4 cut(s) 7, 33, 75, 196
CviKI_1 RGCY 4 cut(s) 7, 33, 75, 196
DpnI GATC 2 cut(s) 93, 146
DpnII GATC 2 cut(s) 91, 144
Eam1104I CTCTTC 3 cut(s) 48, 86, 153
EarI CTCTTC 3 cut(s) 48, 86, 153
Eco147I AGGCCT 1 cut(s) 33
FaiI YATR 1 cut(s) 137
FblI GTMKAC 1 cut(s) 168
FspBI CTAG 1 cut(s) 208
HaeIII GGCC 1 cut(s) 33
HapII CCGG 1 cut(s) 16
HincII GTYRAC 1 cut(s) 169
HindII GTYRAC 1 cut(s) 169
HindIII AAGCTT 1 cut(s) 194
HinfI GANTC 1 cut(s) 53
HpaII CCGG 1 cut(s) 16
HphI GGTGA 1 cut(s) 152
Hpy166II GTNNAC 2 cut(s) 169, 187
Hpy188I TCNGA 1 cut(s) 179
Hpy188III TCNNGA 1 cut(s) 50
Hpy8I GTNNAC 2 cut(s) 169, 187
Hpy99I CGWCG 2 cut(s) 27, 173
Kzo9I GATC 2 cut(s) 91, 144
LpnPI CCDG 5 cut(s) 29, 47, 82, 119, 203
MaeI CTAG 1 cut(s) 208
MalI GATC 2 cut(s) 93, 146
MboI GATC 2 cut(s) 91, 144
MboII GAAGA 3 cut(s) 35, 73, 170
MnlI CCTC 3 cut(s) 51, 154, 185
MslI CAYNNNNRTG 1 cut(s) 108
MspI CCGG 1 cut(s) 16
NdeII GATC 2 cut(s) 91, 144
PceI AGGCCT 1 cut(s) 33
PfeI GAWTC 1 cut(s) 53
RseI CAYNNNNRTG 1 cut(s) 108
SalI GTCGAC 1 cut(s) 167
Sau3AI GATC 2 cut(s) 91, 144
SetI ASST 4 cut(s) 43, 165, 177, 198
SgeI CNNG 8 cut(s) 28, 41, 46, 62, 81, 118, 188, 202
SmiMI CAYNNNNRTG 1 cut(s) 108
SseBI AGGCCT 1 cut(s) 33
SspMI CTAG 1 cut(s) 208
StuI AGGCCT 1 cut(s) 33
TaqI TCGA 4 cut(s) 51, 56, 90, 168
TfiI GAWTC 1 cut(s) 53
TscAI CASTG 3 cut(s) 76, 121, 154
TspDTI ATGAA 1 cut(s) 35
TspRI CASTG 3 cut(s) 76, 121, 154
XcmI CCANNNNNNNNNTGG 2 cut(s) 107, 113
XmiI GTMKAC 1 cut(s) 168
XspI CTAG 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.