Sphingosine kinase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g37540 |
| rosa_chinensis | RchiOBHm_Chr1g0321461 RchiOBHm_Chr5g0059171 |
| rosa_multiflora | Rmu_sc0002345.1_g000030 |
| rosa_roxburghii | Rroxscaffold_6G00416530 |
| rosa_samantha | Rh1AG358500 Rh2AG416400 Rh2BG513300 Rh2CG299300 Rh2DG336600 Rh2DG402900 Rh2DG525000 Rh3BG314800 Rh4AG356700 Rh4BG142100 Rh4DG361900 Rh5AG248700 Rh5AG418700 Rh5BG233400 Rh5BG397400 Rh5BG397500 Rh5CG421400 Rh5CG483900 Rh5DG240300 Rh7BG416300 Rh7BG416400 |
| rosa_wichuraiana | Rw1G031590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 8 |
| AccI | GTMKAC | 1 cut(s) | 153 |
| AciI | CCGC | 2 cut(s) | 159, 190 |
| AcoI | YGGCCR | 1 cut(s) | 18 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 14, 46 |
| AluBI | AGCT | 3 cut(s) | 112, 146, 198 |
| AluI | AGCT | 3 cut(s) | 112, 146, 198 |
| Alw21I | GWGCWC | 2 cut(s) | 114, 148 |
| AoxI | GGCC | 1 cut(s) | 18 |
| ApeKI | GCWGC | 1 cut(s) | 187 |
| AspS9I | GGNCC | 2 cut(s) | 75, 125 |
| AvaII | GGWCC | 2 cut(s) | 75, 125 |
| BalI | TGGCCA | 1 cut(s) | 20 |
| BanII | GRGCYC | 2 cut(s) | 114, 148 |
| Bbv12I | GWGCWC | 2 cut(s) | 114, 148 |
| BbvI | GCAGC | 1 cut(s) | 199 |
| BisI | GCNGC | 1 cut(s) | 188 |
| BlsI | GCNGC | 1 cut(s) | 189 |
| Bme18I | GGWCC | 2 cut(s) | 75, 125 |
| BmgT120I | GGNCC | 2 cut(s) | 75, 125 |
| BmiI | GGNNCC | 1 cut(s) | 126 |
| BsaBI | GATNNNNATC | 1 cut(s) | 137 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 135, 165 |
| Bse1I | ACTGG | 1 cut(s) | 31 |
| Bse8I | GATNNNNATC | 1 cut(s) | 137 |
| BseJI | GATNNNNATC | 1 cut(s) | 137 |
| BseMII | CTCAG | 1 cut(s) | 50 |
| BseNI | ACTGG | 1 cut(s) | 31 |
| BseXI | GCAGC | 1 cut(s) | 199 |
| BshFI | GGCC | 1 cut(s) | 20 |
| BsiHKAI | GWGCWC | 2 cut(s) | 114, 148 |
| BsnI | GGCC | 1 cut(s) | 20 |
| Bsp1286I | GDGCHC | 2 cut(s) | 114, 148 |
| Bsp143I | GATC | 2 cut(s) | 39, 132 |
| BspACI | CCGC | 2 cut(s) | 159, 190 |
| BspANI | GGCC | 1 cut(s) | 20 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BspLI | GGNNCC | 1 cut(s) | 126 |
| BsrI | ACTGG | 1 cut(s) | 31 |
| BssMI | GATC | 2 cut(s) | 39, 132 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| Bst4CI | ACNGT | 1 cut(s) | 68 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstDEI | CTNAG | 1 cut(s) | 36 |
| BstKTI | GATC | 2 cut(s) | 42, 135 |
| BstMBI | GATC | 2 cut(s) | 39, 132 |
| BstV1I | GCAGC | 1 cut(s) | 199 |
| BsuRI | GGCC | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 2 cut(s) | 75, 125 |
| CviJI | RGCY | 6 cut(s) | 20, 30, 46, 112, 146, 198 |
| CviKI_1 | RGCY | 6 cut(s) | 20, 30, 46, 112, 146, 198 |
| DdeI | CTNAG | 1 cut(s) | 36 |
| DpnI | GATC | 2 cut(s) | 41, 134 |
| DpnII | GATC | 2 cut(s) | 39, 132 |
| EaeI | YGGCCR | 1 cut(s) | 18 |
| Ecl136II | GAGCTC | 2 cut(s) | 112, 146 |
| Eco24I | GRGCYC | 2 cut(s) | 114, 148 |
| Eco47I | GGWCC | 2 cut(s) | 75, 125 |
| Eco53kI | GAGCTC | 2 cut(s) | 112, 146 |
| EcoICRI | GAGCTC | 2 cut(s) | 112, 146 |
| EcoT38I | GRGCYC | 2 cut(s) | 114, 148 |
| FblI | GTMKAC | 1 cut(s) | 153 |
| Fnu4HI | GCNGC | 1 cut(s) | 188 |
| FriOI | GRGCYC | 2 cut(s) | 114, 148 |
| Fsp4HI | GCNGC | 1 cut(s) | 188 |
| GluI | GCNGC | 1 cut(s) | 188 |
| HaeIII | GGCC | 1 cut(s) | 20 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| HinfI | GANTC | 2 cut(s) | 138, 168 |
| Hpy166II | GTNNAC | 1 cut(s) | 154 |
| Hpy188I | TCNGA | 4 cut(s) | 39, 129, 137, 143 |
| Hpy188III | TCNNGA | 2 cut(s) | 94, 182 |
| Hpy8I | GTNNAC | 1 cut(s) | 154 |
| Hpy99I | CGWCG | 2 cut(s) | 10, 68 |
| HpyAV | CCTTC | 2 cut(s) | 57, 91 |
| HpyCH4III | ACNGT | 1 cut(s) | 68 |
| HpyCH4IV | ACGT | 1 cut(s) | 5 |
| HpyF3I | CTNAG | 1 cut(s) | 36 |
| HpySE526I | ACGT | 1 cut(s) | 5 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Kzo9I | GATC | 2 cut(s) | 39, 132 |
| LmnI | GCTCC | 2 cut(s) | 143, 184 |
| LpnPI | CCDG | 5 cut(s) | 12, 70, 134, 167, 186 |
| Lsp1109I | GCAGC | 1 cut(s) | 199 |
| MaeII | ACGT | 1 cut(s) | 5 |
| MaeIII | GTNAC | 1 cut(s) | 9 |
| MalI | GATC | 2 cut(s) | 41, 134 |
| MboI | GATC | 2 cut(s) | 39, 132 |
| MboII | GAAGA | 1 cut(s) | 142 |
| MhlI | GDGCHC | 2 cut(s) | 114, 148 |
| MlsI | TGGCCA | 1 cut(s) | 20 |
| MluNI | TGGCCA | 1 cut(s) | 20 |
| MnlI | CCTC | 6 cut(s) | 66, 75, 79, 94, 115, 155 |
| Mox20I | TGGCCA | 1 cut(s) | 20 |
| MscI | TGGCCA | 1 cut(s) | 20 |
| Msp20I | TGGCCA | 1 cut(s) | 20 |
| MspA1I | CMGCKG | 2 cut(s) | 159, 190 |
| NdeII | GATC | 2 cut(s) | 39, 132 |
| NlaIV | GGNNCC | 1 cut(s) | 126 |
| NmuCI | GTSAC | 1 cut(s) | 9 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 39 |
| PfeI | GAWTC | 2 cut(s) | 138, 168 |
| PflFI | GACNNNGTC | 1 cut(s) | 7 |
| PkrI | GCNGC | 1 cut(s) | 189 |
| Psp124BI | GAGCTC | 2 cut(s) | 114, 148 |
| PspN4I | GGNNCC | 1 cut(s) | 126 |
| PspPI | GGNCC | 2 cut(s) | 75, 125 |
| PsyI | GACNNNGTC | 1 cut(s) | 7 |
| SacI | GAGCTC | 2 cut(s) | 114, 148 |
| SatI | GCNGC | 1 cut(s) | 188 |
| Sau3AI | GATC | 2 cut(s) | 39, 132 |
| Sau96I | GGNCC | 2 cut(s) | 75, 125 |
| SduI | GDGCHC | 2 cut(s) | 114, 148 |
| SetI | ASST | 8 cut(s) | 8, 18, 90, 105, 114, 148, 166, 200 |
| SgeI | CNNG | 9 cut(s) | 26, 39, 55, 69, 91, 106, 121, 161, 194 |
| SinI | GGWCC | 2 cut(s) | 75, 125 |
| SsiI | CCGC | 2 cut(s) | 159, 190 |
| SstI | GAGCTC | 2 cut(s) | 114, 148 |
| TaaI | ACNGT | 1 cut(s) | 68 |
| TaiI | ACGT | 1 cut(s) | 8 |
| TaqI | TCGA | 3 cut(s) | 42, 93, 108 |
| TfiI | GAWTC | 2 cut(s) | 138, 168 |
| TseFI | GTSAC | 1 cut(s) | 9 |
| TseI | GCWGC | 1 cut(s) | 187 |
| Tsp45I | GTSAC | 1 cut(s) | 9 |
| Tth111I | GACNNNGTC | 1 cut(s) | 7 |
| VpaK11BI | GGWCC | 2 cut(s) | 75, 125 |
| XmiI | GTMKAC | 1 cut(s) | 153 |
| ZraI | GACGTC | 1 cut(s) | 6 |