Rh2DG402900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
58618397 .. 58625372
6976 bp
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UTR
Exon/CDS
Intron
Rh2DG402900.1

Sequence Viewer

Length: 192 bp
ATGACTGGGAGTCTTTGTGGGTTTACCGACATTAGGGTTTTGAGAAGTATAACAATTTGGGGCGAAAAGTCAAAAACAATCGGGAGTAAGAGGACCAAGAAGGAGGTCATCGGGCTCAAAGTGGAGGGTTTGAAGATCAGAATCAAAGCTCTGGTAGACGGCGAAGGTGAAATCTGCTTTGGTCGAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

6.95

Weight (kDa)

9.62

Isoelectric Point (pI)

11.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 156
AfiI CCNNNNNNNGG 1 cut(s) 33
AgsI TTSAA 1 cut(s) 133
AhdI GACNNNNNGTC 1 cut(s) 9
AjuI GAANNNNNNNTTGG 1 cut(s) 162
AluBI AGCT 1 cut(s) 149
AluI AGCT 1 cut(s) 149
AspS9I GGNCC 1 cut(s) 93
AsuHPI GGTGA 1 cut(s) 179
AvaII GGWCC 1 cut(s) 93
BanII GRGCYC 1 cut(s) 117
BceAI ACGGC 1 cut(s) 175
Bme18I GGWCC 1 cut(s) 93
BmeRI GACNNNNNGTC 1 cut(s) 9
BmgT120I GGNCC 1 cut(s) 93
BmrI ACTGGG 1 cut(s) 15
BmuI ACTGGG 1 cut(s) 15
BsaBI GATNNNNATC 1 cut(s) 140
BsaXI ACNNNNNCTCC 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 33
Bse1I ACTGG 1 cut(s) 10
Bse8I GATNNNNATC 1 cut(s) 140
BseJI GATNNNNATC 1 cut(s) 140
BseLI CCNNNNNNNGG 1 cut(s) 33
BseNI ACTGG 1 cut(s) 10
BslI CCNNNNNNNGG 1 cut(s) 33
Bsp1286I GDGCHC 1 cut(s) 117
Bsp143I GATC 1 cut(s) 135
BsrI ACTGG 1 cut(s) 10
BssMI GATC 1 cut(s) 135
BstKTI GATC 1 cut(s) 138
BstMBI GATC 1 cut(s) 135
Cfr13I GGNCC 1 cut(s) 93
CviJI RGCY 2 cut(s) 115, 149
CviKI_1 RGCY 2 cut(s) 115, 149
DpnI GATC 1 cut(s) 137
DpnII GATC 1 cut(s) 135
DriI GACNNNNNGTC 1 cut(s) 9
Eam1105I GACNNNNNGTC 1 cut(s) 9
Eco24I GRGCYC 1 cut(s) 117
Eco47I GGWCC 1 cut(s) 93
EcoT38I GRGCYC 1 cut(s) 117
FaiI YATR 1 cut(s) 50
FblI GTMKAC 1 cut(s) 156
FriOI GRGCYC 1 cut(s) 117
HinfI GANTC 2 cut(s) 10, 141
HphI GGTGA 1 cut(s) 179
Hpy166II GTNNAC 2 cut(s) 24, 157
Hpy188I TCNGA 1 cut(s) 140
Hpy188III TCNNGA 2 cut(s) 82, 185
Hpy8I GTNNAC 2 cut(s) 24, 157
HpyAV CCTTC 2 cut(s) 94, 158
Kzo9I GATC 1 cut(s) 135
LpnPI CCDG 1 cut(s) 137
MalI GATC 1 cut(s) 137
MboI GATC 1 cut(s) 135
MboII GAAGA 1 cut(s) 145
MhlI GDGCHC 1 cut(s) 117
MluCI AATT 1 cut(s) 54
MlyI GAGTC 1 cut(s) 19
MnlI CCTC 3 cut(s) 84, 97, 118
NdeII GATC 1 cut(s) 135
PfeI GAWTC 1 cut(s) 141
PleI GAGTC 1 cut(s) 18
PpsI GAGTC 1 cut(s) 18
PspPI GGNCC 1 cut(s) 93
Sau3AI GATC 1 cut(s) 135
Sau96I GGNCC 1 cut(s) 93
SchI GAGTC 1 cut(s) 19
SduI GDGCHC 1 cut(s) 117
SetI ASST 3 cut(s) 108, 151, 169
SgeI CNNG 5 cut(s) 18, 94, 109, 124, 164
SinI GGWCC 1 cut(s) 93
Sse9I AATT 1 cut(s) 54
TaqI TCGA 1 cut(s) 184
TasI AATT 1 cut(s) 54
TfiI GAWTC 1 cut(s) 141
VpaK11BI GGWCC 1 cut(s) 93
XmiI GTMKAC 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.