Rw1G031590

UPF0695 membrane protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
59745258 .. 59746513
1256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G031590.1

Sequence Viewer

Length: 327 bp
ATGATGTTGGTGTTCAGTTTACACTGCAAGGCAAGTACAGAAAGAATACCAAAATTGTTGGAGTATGGTTCATGTATGACTCATCTAGCCTTCTTTGGCATTCTTAAGGTCTTAACGAGATATCTACTGCAAAAATTGGTTGGCCTTGGAGTTGCTGGTATGACAAGTGACCAAACAATGCTTTACCTTGATCTTCCTTCTAATATGGTATCTCTCTTGCGCGTGCGCCCCCCCAACCCACACACACACAAAGTCACCCAAGCAAATGTAGTTGGCTCGTTCTTGATGGGGTGGTGCGGTGTTGTTTTCAAACCAGATATCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

12.04

Weight (kDa)

9.41

Isoelectric Point (pI)

20.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 222
AciI CCGC 1 cut(s) 297
AfaI GTAC 1 cut(s) 37
AflII CTTAAG 1 cut(s) 104
AgsI TTSAA 1 cut(s) 310
AoxI GGCC 1 cut(s) 142
AspLEI GCGC 2 cut(s) 222, 228
AsuHPI GGTGA 1 cut(s) 247
BccI CCATC 1 cut(s) 280
BfaI CTAG 1 cut(s) 86
BfrI CTTAAG 1 cut(s) 104
BsaJI CCNNGG 1 cut(s) 145
BseDI CCNNGG 1 cut(s) 145
Bsh1236I CGCG 1 cut(s) 222
BshFI GGCC 1 cut(s) 144
BsmI GAATGC 1 cut(s) 99
BsnI GGCC 1 cut(s) 144
Bsp143I GATC 1 cut(s) 190
BspACI CCGC 1 cut(s) 297
BspANI GGCC 1 cut(s) 144
BspFNI CGCG 1 cut(s) 222
BspTI CTTAAG 1 cut(s) 104
BssECI CCNNGG 1 cut(s) 145
BssMI GATC 1 cut(s) 190
BssT1I CCWWGG 1 cut(s) 145
BstAFI CTTAAG 1 cut(s) 104
BstC8I GCNNGC 1 cut(s) 224
BstFNI CGCG 1 cut(s) 222
BstHHI GCGC 2 cut(s) 222, 228
BstKTI GATC 1 cut(s) 193
BstMBI GATC 1 cut(s) 190
BstUI CGCG 1 cut(s) 222
BsuRI GGCC 1 cut(s) 144
BtsI GCAGTG 1 cut(s) 22
BtsIMutI CAGTG 1 cut(s) 22
Cac8I GCNNGC 1 cut(s) 224
CfoI GCGC 2 cut(s) 222, 228
Csp6I GTAC 1 cut(s) 36
CviAII CATG 1 cut(s) 72
CviJI RGCY 3 cut(s) 89, 144, 276
CviKI_1 RGCY 3 cut(s) 89, 144, 276
CviQI GTAC 1 cut(s) 36
DpnI GATC 1 cut(s) 192
DpnII GATC 1 cut(s) 190
Eco130I CCWWGG 1 cut(s) 145
Eco32I GATATC 2 cut(s) 122, 319
EcoRV GATATC 2 cut(s) 122, 319
EcoT14I CCWWGG 1 cut(s) 145
ErhI CCWWGG 1 cut(s) 145
FaeI CATG 1 cut(s) 75
FaiI YATR 7 cut(s) 66, 73, 77, 161, 206, 323, 325
FatI CATG 1 cut(s) 71
FspBI CTAG 1 cut(s) 86
GlaI GCGC 2 cut(s) 221, 227
HaeIII GGCC 1 cut(s) 144
HhaI GCGC 2 cut(s) 222, 228
Hin1II CATG 1 cut(s) 75
Hin6I GCGC 2 cut(s) 220, 226
HinP1I GCGC 2 cut(s) 220, 226
HinfI GANTC 1 cut(s) 79
HphI GGTGA 1 cut(s) 247
Hpy166II GTNNAC 1 cut(s) 20
Hpy188III TCNNGA 1 cut(s) 283
Hpy8I GTNNAC 1 cut(s) 20
HpyAV CCTTC 2 cut(s) 100, 207
HpyCH4V TGCA 2 cut(s) 27, 130
Hsp92II CATG 1 cut(s) 75
HspAI GCGC 2 cut(s) 220, 226
Kzo9I GATC 1 cut(s) 190
LpnPI CCDG 1 cut(s) 141
MaeI CTAG 1 cut(s) 86
MaeIII GTNAC 2 cut(s) 167, 253
MalI GATC 1 cut(s) 192
MboI GATC 1 cut(s) 190
MboII GAAGA 1 cut(s) 185
MluCI AATT 2 cut(s) 53, 134
MlyI GAGTC 1 cut(s) 73
MmeI TCCRAC 1 cut(s) 39
MseI TTAA 2 cut(s) 105, 113
MspCI CTTAAG 1 cut(s) 104
Mva1269I GAATGC 1 cut(s) 99
MvnI CGCG 1 cut(s) 222
NdeII GATC 1 cut(s) 190
NlaIII CATG 1 cut(s) 75
NmuCI GTSAC 2 cut(s) 167, 253
PctI GAATGC 1 cut(s) 99
PleI GAGTC 1 cut(s) 73
PpsI GAGTC 1 cut(s) 73
RsaI GTAC 1 cut(s) 37
RsaNI GTAC 1 cut(s) 36
SaqAI TTAA 2 cut(s) 105, 113
Sau3AI GATC 1 cut(s) 190
SchI GAGTC 1 cut(s) 73
SetI ASST 2 cut(s) 111, 189
SmlI CTYRAG 1 cut(s) 104
SmoI CTYRAG 1 cut(s) 104
Sse9I AATT 2 cut(s) 53, 134
SsiI CCGC 1 cut(s) 297
SspMI CTAG 1 cut(s) 86
StyI CCWWGG 1 cut(s) 145
TasI AATT 2 cut(s) 53, 134
TatI WGTACW 1 cut(s) 35
Tru1I TTAA 2 cut(s) 105, 113
Tru9I TTAA 2 cut(s) 105, 113
TscAI CASTG 1 cut(s) 29
TseFI GTSAC 2 cut(s) 167, 253
Tsp45I GTSAC 2 cut(s) 167, 253
TspDTI ATGAA 1 cut(s) 60
TspRI CASTG 1 cut(s) 29
Vha464I CTTAAG 1 cut(s) 104
XspI CTAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.