Sphingosine kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g37540 |
| rosa_chinensis | RchiOBHm_Chr1g0321461 RchiOBHm_Chr5g0059171 |
| rosa_multiflora | Rmu_sc0002345.1_g000030 |
| rosa_roxburghii | Rroxscaffold_6G00416530 |
| rosa_samantha | Rh1AG358500 Rh2AG416400 Rh2BG513300 Rh2CG299300 Rh2DG336600 Rh2DG402900 Rh2DG525000 Rh3BG314800 Rh4AG356700 Rh4BG142100 Rh4DG361900 Rh5AG248700 Rh5AG418700 Rh5BG233400 Rh5BG397400 Rh5BG397500 Rh5CG421400 Rh5CG483900 Rh5DG240300 Rh7BG416300 Rh7BG416400 |
| rosa_wichuraiana | Rw1G031590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 25 |
| AccB1I | GGYRCC | 1 cut(s) | 84 |
| AciI | CCGC | 2 cut(s) | 5, 203 |
| AcsI | RAATTY | 2 cut(s) | 101, 371 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AgsI | TTSAA | 3 cut(s) | 178, 227, 325 |
| AluBI | AGCT | 2 cut(s) | 26, 94 |
| AluI | AGCT | 2 cut(s) | 26, 94 |
| Alw21I | GWGCWC | 1 cut(s) | 28 |
| ApoI | RAATTY | 2 cut(s) | 101, 371 |
| AsuHPI | GGTGA | 2 cut(s) | 22, 365 |
| BanI | GGYRCC | 1 cut(s) | 84 |
| BanII | GRGCYC | 1 cut(s) | 28 |
| Bbv12I | GWGCWC | 1 cut(s) | 28 |
| BfuAI | ACCTGC | 1 cut(s) | 25 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 130 |
| BisI | GCNGC | 1 cut(s) | 203 |
| BlsI | GCNGC | 1 cut(s) | 204 |
| BmiI | GGNNCC | 1 cut(s) | 86 |
| BmsI | GCATC | 1 cut(s) | 205 |
| BpmI | CTGGAG | 1 cut(s) | 42 |
| BsaJI | CCNNGG | 1 cut(s) | 340 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 15, 32, 45, 62 |
| BseDI | CCNNGG | 1 cut(s) | 340 |
| BseRI | GAGGAG | 1 cut(s) | 86 |
| BshNI | GGYRCC | 1 cut(s) | 84 |
| BsiHKAI | GWGCWC | 1 cut(s) | 28 |
| Bsp1286I | GDGCHC | 1 cut(s) | 28 |
| BspACI | CCGC | 2 cut(s) | 5, 203 |
| BspLI | GGNNCC | 1 cut(s) | 86 |
| BspMI | ACCTGC | 1 cut(s) | 25 |
| BspT107I | GGYRCC | 1 cut(s) | 84 |
| BssECI | CCNNGG | 1 cut(s) | 340 |
| BssT1I | CCWWGG | 1 cut(s) | 340 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 130 |
| BtsI | GCAGTG | 1 cut(s) | 233 |
| BtsIMutI | CAGTG | 1 cut(s) | 233 |
| BveI | ACCTGC | 1 cut(s) | 25 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviAII | CATG | 1 cut(s) | 283 |
| CviJI | RGCY | 7 cut(s) | 26, 55, 79, 94, 124, 133, 202 |
| CviKI_1 | RGCY | 7 cut(s) | 26, 55, 79, 94, 124, 133, 202 |
| CviQI | GTAC | 1 cut(s) | 247 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Ecl136II | GAGCTC | 1 cut(s) | 26 |
| Eco130I | CCWWGG | 1 cut(s) | 340 |
| Eco24I | GRGCYC | 1 cut(s) | 28 |
| Eco53kI | GAGCTC | 1 cut(s) | 26 |
| EcoICRI | GAGCTC | 1 cut(s) | 26 |
| EcoRI | GAATTC | 1 cut(s) | 101 |
| EcoT14I | CCWWGG | 1 cut(s) | 340 |
| EcoT38I | GRGCYC | 1 cut(s) | 28 |
| ErhI | CCWWGG | 1 cut(s) | 340 |
| FaeI | CATG | 1 cut(s) | 286 |
| FaiI | YATR | 3 cut(s) | 277, 284, 299 |
| FatI | CATG | 1 cut(s) | 282 |
| Fnu4HI | GCNGC | 1 cut(s) | 203 |
| FriOI | GRGCYC | 1 cut(s) | 28 |
| Fsp4HI | GCNGC | 1 cut(s) | 203 |
| GluI | GCNGC | 1 cut(s) | 203 |
| GsuI | CTGGAG | 1 cut(s) | 42 |
| Hin1II | CATG | 1 cut(s) | 286 |
| HinfI | GANTC | 3 cut(s) | 68, 110, 148 |
| HphI | GGTGA | 2 cut(s) | 22, 365 |
| Hpy188I | TCNGA | 2 cut(s) | 64, 119 |
| Hpy188III | TCNNGA | 1 cut(s) | 34 |
| HpyAV | CCTTC | 1 cut(s) | 31 |
| HpyCH4V | TGCA | 1 cut(s) | 238 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 130 |
| Hsp92II | CATG | 1 cut(s) | 286 |
| LmnI | GCTCC | 3 cut(s) | 23, 99, 162 |
| LpnPI | CCDG | 7 cut(s) | 6, 14, 19, 30, 67, 86, 101 |
| LweI | GCATC | 1 cut(s) | 205 |
| MboII | GAAGA | 2 cut(s) | 190, 326 |
| MhlI | GDGCHC | 1 cut(s) | 28 |
| MluCI | AATT | 4 cut(s) | 101, 227, 264, 371 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MmeI | TCCRAC | 1 cut(s) | 250 |
| MnlI | CCTC | 5 cut(s) | 58, 69, 107, 152, 353 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 130 |
| NlaIII | CATG | 1 cut(s) | 286 |
| NlaIV | GGNNCC | 1 cut(s) | 86 |
| PfeI | GAWTC | 2 cut(s) | 110, 148 |
| PkrI | GCNGC | 1 cut(s) | 204 |
| PleI | GAGTC | 1 cut(s) | 62 |
| PpsI | GAGTC | 1 cut(s) | 62 |
| Psp124BI | GAGCTC | 1 cut(s) | 28 |
| PspN4I | GGNNCC | 1 cut(s) | 86 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| SacI | GAGCTC | 1 cut(s) | 28 |
| SatI | GCNGC | 1 cut(s) | 203 |
| SchI | GAGTC | 1 cut(s) | 62 |
| SduI | GDGCHC | 1 cut(s) | 28 |
| SetI | ASST | 4 cut(s) | 12, 19, 28, 96 |
| SfaNI | GCATC | 1 cut(s) | 205 |
| Sse9I | AATT | 4 cut(s) | 101, 227, 264, 371 |
| SsiI | CCGC | 2 cut(s) | 5, 203 |
| SstI | GAGCTC | 1 cut(s) | 28 |
| StyI | CCWWGG | 1 cut(s) | 340 |
| TaqI | TCGA | 2 cut(s) | 99, 170 |
| TasI | AATT | 4 cut(s) | 101, 227, 264, 371 |
| TatI | WGTACW | 1 cut(s) | 246 |
| TauI | GCSGC | 1 cut(s) | 205 |
| TfiI | GAWTC | 2 cut(s) | 110, 148 |
| TscAI | CASTG | 1 cut(s) | 240 |
| TspDTI | ATGAA | 3 cut(s) | 94, 207, 271 |
| TspRI | CASTG | 1 cut(s) | 240 |
| XapI | RAATTY | 2 cut(s) | 101, 371 |