Sphingosine kinase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g37540 |
| rosa_chinensis | RchiOBHm_Chr1g0321461 RchiOBHm_Chr5g0059171 |
| rosa_multiflora | Rmu_sc0002345.1_g000030 |
| rosa_roxburghii | Rroxscaffold_6G00416530 |
| rosa_samantha | Rh1AG358500 Rh2AG416400 Rh2BG513300 Rh2CG299300 Rh2DG336600 Rh2DG402900 Rh2DG525000 Rh3BG314800 Rh4AG356700 Rh4BG142100 Rh4DG361900 Rh5AG248700 Rh5AG418700 Rh5BG233400 Rh5BG397400 Rh5BG397500 Rh5CG421400 Rh5CG483900 Rh5DG240300 Rh7BG416300 Rh7BG416400 |
| rosa_wichuraiana | Rw1G031590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 54 |
| Acc36I | ACCTGC | 2 cut(s) | 217, 305 |
| AccI | GTMKAC | 2 cut(s) | 30, 279 |
| AccII | CGCG | 2 cut(s) | 18, 87 |
| AciI | CCGC | 4 cut(s) | 72, 212, 285, 315 |
| AclWI | GGATC | 2 cut(s) | 245, 258 |
| AfaI | GTAC | 2 cut(s) | 95, 102 |
| AjnI | CCWGG | 1 cut(s) | 10 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 329 |
| AluBI | AGCT | 2 cut(s) | 272, 323 |
| AluI | AGCT | 2 cut(s) | 272, 323 |
| Alw21I | GWGCWC | 2 cut(s) | 274, 325 |
| AlwI | GGATC | 2 cut(s) | 245, 258 |
| ApeKI | GCWGC | 1 cut(s) | 300 |
| AspLEI | GCGC | 2 cut(s) | 55, 64 |
| AsuC2I | CCSGG | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 2 cut(s) | 86, 133 |
| BamHI | GGATCC | 1 cut(s) | 250 |
| BanII | GRGCYC | 3 cut(s) | 240, 274, 325 |
| Bbv12I | GWGCWC | 2 cut(s) | 274, 325 |
| BbvI | GCAGC | 1 cut(s) | 287 |
| BceAI | ACGGC | 1 cut(s) | 298 |
| BciT130I | CCWGG | 1 cut(s) | 12 |
| BcnI | CCSGG | 1 cut(s) | 25 |
| BfaI | CTAG | 1 cut(s) | 349 |
| BfuAI | ACCTGC | 2 cut(s) | 217, 305 |
| BisI | GCNGC | 1 cut(s) | 301 |
| BlsI | GCNGC | 1 cut(s) | 302 |
| Bme1390I | CCNGG | 2 cut(s) | 12, 25 |
| BmiI | GGNNCC | 3 cut(s) | 113, 252, 295 |
| BmrFI | CCNGG | 2 cut(s) | 12, 25 |
| BpuMI | CCSGG | 1 cut(s) | 25 |
| BsaBI | GATNNNNATC | 1 cut(s) | 263 |
| BsaJI | CCNNGG | 1 cut(s) | 24 |
| BsaWI | WCCGGW | 1 cut(s) | 325 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 261, 291, 312, 342 |
| Bse118I | RCCGGY | 1 cut(s) | 58 |
| Bse8I | GATNNNNATC | 1 cut(s) | 263 |
| BseBI | CCWGG | 1 cut(s) | 12 |
| BseDI | CCNNGG | 1 cut(s) | 24 |
| BseJI | GATNNNNATC | 1 cut(s) | 263 |
| BseRI | GAGGAG | 1 cut(s) | 333 |
| BseXI | GCAGC | 1 cut(s) | 287 |
| Bsh1236I | CGCG | 2 cut(s) | 18, 87 |
| BsiHKAI | GWGCWC | 2 cut(s) | 274, 325 |
| BsiSI | CCGG | 3 cut(s) | 24, 59, 326 |
| Bsp1286I | GDGCHC | 3 cut(s) | 240, 274, 325 |
| Bsp1407I | TGTACA | 2 cut(s) | 93, 100 |
| Bsp143I | GATC | 2 cut(s) | 250, 258 |
| Bsp68I | TCGCGA | 1 cut(s) | 18 |
| BspACI | CCGC | 4 cut(s) | 72, 212, 285, 315 |
| BspFNI | CGCG | 2 cut(s) | 18, 87 |
| BspLI | GGNNCC | 3 cut(s) | 113, 252, 295 |
| BspMI | ACCTGC | 2 cut(s) | 217, 305 |
| BspPI | GGATC | 2 cut(s) | 245, 258 |
| BsrFI | RCCGGY | 1 cut(s) | 58 |
| BsrGI | TGTACA | 2 cut(s) | 93, 100 |
| BssAI | RCCGGY | 1 cut(s) | 58 |
| BssECI | CCNNGG | 1 cut(s) | 24 |
| BssMI | GATC | 2 cut(s) | 250, 258 |
| BssNAI | GTATAC | 1 cut(s) | 31 |
| Bst1107I | GTATAC | 1 cut(s) | 31 |
| Bst2UI | CCWGG | 1 cut(s) | 12 |
| Bst4CI | ACNGT | 2 cut(s) | 145, 190 |
| BstAUI | TGTACA | 2 cut(s) | 93, 100 |
| BstFNI | CGCG | 2 cut(s) | 18, 87 |
| BstHHI | GCGC | 2 cut(s) | 55, 64 |
| BstKTI | GATC | 2 cut(s) | 253, 261 |
| BstMBI | GATC | 2 cut(s) | 250, 258 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 59, 61, 120 |
| BstNI | CCWGG | 1 cut(s) | 12 |
| BstSCI | CCNGG | 2 cut(s) | 10, 23 |
| BstUI | CGCG | 2 cut(s) | 18, 87 |
| BstV1I | GCAGC | 1 cut(s) | 287 |
| BstX2I | RGATCY | 1 cut(s) | 250 |
| BstYI | RGATCY | 1 cut(s) | 250 |
| BstZ17I | GTATAC | 1 cut(s) | 31 |
| BtuMI | TCGCGA | 1 cut(s) | 18 |
| BveI | ACCTGC | 2 cut(s) | 217, 305 |
| CfoI | GCGC | 2 cut(s) | 55, 64 |
| Cfr10I | RCCGGY | 1 cut(s) | 58 |
| CsiI | ACCWGGT | 1 cut(s) | 10 |
| Csp6I | GTAC | 2 cut(s) | 94, 101 |
| CviJI | RGCY | 6 cut(s) | 114, 161, 172, 238, 272, 323 |
| CviKI_1 | RGCY | 6 cut(s) | 114, 161, 172, 238, 272, 323 |
| CviQI | GTAC | 2 cut(s) | 94, 101 |
| DpnI | GATC | 2 cut(s) | 252, 260 |
| DpnII | GATC | 2 cut(s) | 250, 258 |
| EciI | GGCGGA | 1 cut(s) | 300 |
| Ecl136II | GAGCTC | 2 cut(s) | 272, 323 |
| Eco24I | GRGCYC | 3 cut(s) | 240, 274, 325 |
| Eco53kI | GAGCTC | 2 cut(s) | 272, 323 |
| EcoICRI | GAGCTC | 2 cut(s) | 272, 323 |
| EcoRII | CCWGG | 1 cut(s) | 10 |
| EcoT38I | GRGCYC | 3 cut(s) | 240, 274, 325 |
| FaiI | YATR | 2 cut(s) | 31, 129 |
| FblI | GTMKAC | 2 cut(s) | 30, 279 |
| Fnu4HI | GCNGC | 1 cut(s) | 301 |
| FriOI | GRGCYC | 3 cut(s) | 240, 274, 325 |
| Fsp4HI | GCNGC | 1 cut(s) | 301 |
| FspBI | CTAG | 1 cut(s) | 349 |
| FspI | TGCGCA | 1 cut(s) | 54 |
| GlaI | GCGC | 2 cut(s) | 54, 63 |
| GluI | GCNGC | 1 cut(s) | 301 |
| HapII | CCGG | 3 cut(s) | 24, 59, 326 |
| HhaI | GCGC | 2 cut(s) | 55, 64 |
| Hin6I | GCGC | 2 cut(s) | 53, 62 |
| HinP1I | GCGC | 2 cut(s) | 53, 62 |
| HinfI | GANTC | 3 cut(s) | 77, 82, 264 |
| HpaII | CCGG | 3 cut(s) | 24, 59, 326 |
| HphI | GGTGA | 2 cut(s) | 86, 133 |
| Hpy166II | GTNNAC | 2 cut(s) | 31, 280 |
| Hpy188I | TCNGA | 3 cut(s) | 255, 263, 269 |
| Hpy188III | TCNNGA | 4 cut(s) | 17, 39, 220, 331 |
| Hpy8I | GTNNAC | 2 cut(s) | 31, 280 |
| Hpy99I | CGWCG | 1 cut(s) | 140 |
| HpyAV | CCTTC | 2 cut(s) | 183, 328 |
| HpyCH4III | ACNGT | 2 cut(s) | 145, 190 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 59, 61, 120 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| HspAI | GCGC | 2 cut(s) | 53, 62 |
| Kzo9I | GATC | 2 cut(s) | 250, 258 |
| LmnI | GCTCC | 4 cut(s) | 111, 269, 320, 328 |
| Lsp1109I | GCAGC | 1 cut(s) | 287 |
| MabI | ACCWGGT | 1 cut(s) | 10 |
| MaeI | CTAG | 1 cut(s) | 349 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MaeIII | GTNAC | 1 cut(s) | 139 |
| MalI | GATC | 2 cut(s) | 252, 260 |
| MboI | GATC | 2 cut(s) | 250, 258 |
| MboII | GAAGA | 1 cut(s) | 268 |
| MflI | RGATCY | 1 cut(s) | 250 |
| MhlI | GDGCHC | 3 cut(s) | 240, 274, 325 |
| MluCI | AATT | 1 cut(s) | 242 |
| MlyI | GAGTC | 1 cut(s) | 91 |
| MnlI | CCTC | 7 cut(s) | 125, 134, 192, 201, 241, 281, 311 |
| MspI | CCGG | 3 cut(s) | 24, 59, 326 |
| MspR9I | CCNGG | 2 cut(s) | 12, 25 |
| MvaI | CCWGG | 1 cut(s) | 12 |
| MvnI | CGCG | 2 cut(s) | 18, 87 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 59, 61, 120 |
| NciI | CCSGG | 1 cut(s) | 25 |
| NdeII | GATC | 2 cut(s) | 250, 258 |
| NlaIV | GGNNCC | 3 cut(s) | 113, 252, 295 |
| NmuCI | GTSAC | 1 cut(s) | 139 |
| NruI | TCGCGA | 1 cut(s) | 18 |
| NsbI | TGCGCA | 1 cut(s) | 54 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 141 |
| PfeI | GAWTC | 2 cut(s) | 77, 264 |
| PkrI | GCNGC | 1 cut(s) | 302 |
| PleI | GAGTC | 1 cut(s) | 90 |
| PpsI | GAGTC | 1 cut(s) | 90 |
| Psp124BI | GAGCTC | 2 cut(s) | 274, 325 |
| Psp6I | CCWGG | 1 cut(s) | 10 |
| PspGI | CCWGG | 1 cut(s) | 10 |
| PspN4I | GGNNCC | 3 cut(s) | 113, 252, 295 |
| PsuI | RGATCY | 1 cut(s) | 250 |
| RruI | TCGCGA | 1 cut(s) | 18 |
| RsaI | GTAC | 2 cut(s) | 95, 102 |
| RsaNI | GTAC | 2 cut(s) | 94, 101 |
| SacI | GAGCTC | 2 cut(s) | 274, 325 |
| SatI | GCNGC | 1 cut(s) | 301 |
| Sau3AI | GATC | 2 cut(s) | 250, 258 |
| SchI | GAGTC | 1 cut(s) | 91 |
| ScrFI | CCNGG | 2 cut(s) | 12, 25 |
| SduI | GDGCHC | 3 cut(s) | 240, 274, 325 |
| SetI | ASST | 8 cut(s) | 13, 38, 138, 231, 274, 292, 299, 325 |
| SexAI | ACCWGGT | 1 cut(s) | 10 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SsiI | CCGC | 4 cut(s) | 72, 212, 285, 315 |
| SspMI | CTAG | 1 cut(s) | 349 |
| SstI | GAGCTC | 2 cut(s) | 274, 325 |
| StyD4I | CCNGG | 2 cut(s) | 10, 23 |
| TaaI | ACNGT | 2 cut(s) | 145, 190 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TaqI | TCGA | 2 cut(s) | 80, 219 |
| TasI | AATT | 1 cut(s) | 242 |
| TatI | WGTACW | 2 cut(s) | 93, 100 |
| TfiI | GAWTC | 2 cut(s) | 77, 264 |
| TseFI | GTSAC | 1 cut(s) | 139 |
| TseI | GCWGC | 1 cut(s) | 300 |
| Tsp45I | GTSAC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XmiI | GTMKAC | 2 cut(s) | 30, 279 |
| XspI | CTAG | 1 cut(s) | 349 |