Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0007547

Physical Location & Seq

Genomic Coordinates Reverse (-)

80281747 .. 80289341

Gene Structure 7595 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG630000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGAGATTATTGACACCGGGAATGCCACTGTCACTGAAGTAGTGGAAGCTCATGGTGGTTCTGTTCAATCTATTGTAAGACTTCCCAATGAAAATGGTTTTGTCACAGGAAGTTTGGATGGTTATGTCAAGTTCTGGGAATATGAAGTCAAACAAAAGTCTCCCAAGTATACTATATGGACACCTTTCCTTACCTTATTTGATCATAAGCTGCCTGTGCTATGTATGGATGCATCATCTGATGGAGATCTGATAGTGACTGGATCTCAAGACAAAAATTTAAAGATTTGGGGTTTAGATTTTGGCGACTGCCACAAATCAATGTTCTTTCATAGGAGCAGTGTTAAGCAAGTTAAATTTGTATCAAATACCCATTACGTGGTTAGTGTTGGTAAAGATAAGCAAGTGAACTACTGGGATGCTGATAAATTTGAGTTACTTTTAACTATTGAGGGACACCATGAGGGTGTTTGTTGCCTCGCTATTAGCAACCTTGGTGATTTTTTTGTCACGGGATCTGTTGATCGATCCATATGTTGCTGGGATCGTACTGACAAGCCATTTTTTTTGGATTTGAAATTTCAGGAAGAGAATCAGAAAAGGTTGTTAGAACGTTATGAGTCTGAGCTCAAGCATGCAGCGGAAGAAGAAATTCCTGAGAAGGGAGCTGTGGCCTTAGTGGGAAAGGAAAAAACAATTGATCTGACAGATGAACTTATTAATGCACTAGATGTAGCTGCCGAATATGAGGGAAAAAAGTCCAGATCTGGTCATGTTCTGTATGCACTTTCAAAGATTAAGAGTGATCTGAAGTTGGTGCTACTGTGCTTACCGTTCACAGATGCTTTGAGGCTTTTGCCTTACTTGGAGGACCTTGCTTCATATCCTGACCAGGACTTGATCTCATCATACCCAAAAGTTGAATACATCCAACTTCTCCCAACTGGTCCCTGCAACACACACTCGCTCTACAACACTCTCCCCTACTCTAAATACTCATCCTTATTCCCACACCAATCAAACTCCATTTCAAGATTTGTTTCTCCAATTCCGAGGATGGTGAAGACCAAAGTCTCTGAAATCCCGAAGATTACTTACCAGGCGGATATGATGGATGAATTGAAGGCGGCACATGTTCTTATGGGTATTGGTGCTCCGGAGGCGGTGGCGGACGGTGTTCCTTCAGCGGCGGCGGTGGAGGAAAGCAGATGTGGTGGTGGTGATGAAGAGTCACGCCCAAGTTCTAAGGCTGATGAAATTAATATCCCCCCTTGGACACTAATAATCCCGAAGTTGGAAGATCACACTAATCTTCTACAGCTCCCTGACGATCAGGTTGTGGGTGTTCGACTTCCAGCTGACCTTGATTCAGTGAGTGCAGCTACAGCGGTCATGTTAGTGCCAGTGCTCGGTCGTACTATGAGCCTTTTGAAAAAAGAAATGAATCAGGAGGAGGGTGAGCAAAGAAAGGAGAATAAACATAAGGAGGATGTTATTGTTTTAAGTGATGACGATGAAGATGACGAGAAGGAGAAGGCTGGGAAGGTCTATTCAAAGCCGCTGTTGATGAAAATGAAGGTTGATGACCTTAGACATTTAGCTGTTAAGCTGCGATTGAAAAATAGCTCCTGGGATTCAAAGGAGAAGCTGGTTGATCGTATTGCAAAGGCACTAGGTGTTTGTAATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0012505 GO:0016020 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

563

Amino Acids

63.0

Weight (kDa)

5.23

Isoelectric Point (pI)

35.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_2nd	PF25172	1 - 54	4e-07	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	2 - 149	1.6e-09	CDC20/Fizzy WD40 domain
WD40_Gbeta	PF25391	7 - 181	6.1e-10	G protein beta WD-40 repeat protein
Beta-prop_WDR3_1st	PF25173	9 - 182	6.8e-26	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	11 - 184	2.3e-21	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	16 - 176	6e-08	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2	PF23414	28 - 182	3.2e-09	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd	PF25047	36 - 154	4.3e-08	TEP-1 second beta-propeller
Beta-prop_EML	PF23409	43 - 142	7.5e-06	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_2nd	PF25172	62 - 187	1.1e-55	WDR3 second beta-propeller domain
WD40	PF00400	62 - 97	5.9e-07	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	67 - 185	1.4e-21	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	69 - 147	5e-09	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	73 - 185	6.9e-12	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	73 - 193	1.1e-17	Prp19 WD40 domain
WD40_MABP1-WDR62_1st	PF24780	76 - 181	6e-07	MABP1/WDR62 first WD40 domain
WDR55	PF24796	108 - 197	3.2e-06	WDR55
EIF3I	PF24805	111 - 196	5.2e-08	EIF3I
WD40	PF00400	145 - 182	1.4e-08	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007547)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0174141 RchiOBHm_Chr2g0174151 RchiOBHm_Chr5g0012111
rosa_laevigata	RLG00000022250 RLG00000022251
rosa_multiflora	Rmu_sc0003188.1_g000038 Rmu_sc0038402.1_g000002
rosa_roxburghii	Rroxscaffold_2G00078420
rosa_rugosa	Rorug02G0575000 Rorug02G0575100 Rorug02G0575100 Rorug02G0575300 Rorug02G0575400
rosa_samantha	Rh2AG654600 Rh2AG654700 Rh2AG654800 Rh2BG665800 Rh2BG666000 Rh2CG630000 Rh2CG630100 Rh2DG680400 Rh2DG680500 Rh7BG432400
rosa_wichuraiana	Rw2G053730 Rw2G053740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	379
AccI	GTMKAC	1 cut(s)	170
AccIII	TCCGGA	1 cut(s)	1156
AclI	AACGTT	1 cut(s)	613
AclWI	GGATC	4 cut(s)	271, 522, 523, 552
AcsI	RAATTY	5 cut(s)	277, 356, 428, 578, 651
AcuI	CTGAAG	3 cut(s)	57, 830, 1167
AdeI	CACNNNGTG	1 cut(s)	1676
AfaI	GTAC	2 cut(s)	550, 1417
AfiI	CCNNNNNNNGG	4 cut(s)	379, 662, 1294, 1409
AflIII	ACRYGT	1 cut(s)	1132
AjnI	CCWGG	3 cut(s)	891, 1098, 1628
Alw21I	GWGCWC	3 cut(s)	630, 1156, 1410
Alw26I	GTCTC	2 cut(s)	165, 1078
AlwI	GGATC	4 cut(s)	271, 522, 523, 552
Aor13HI	TCCGGA	1 cut(s)	1156
AoxI	GGCC	1 cut(s)	672
ApeKI	GCWGC	5 cut(s)	211, 638, 737, 1379, 1609
ApoI	RAATTY	5 cut(s)	277, 356, 428, 578, 651
AseI	ATTAAT	2 cut(s)	720, 1260
Asp700I	GAANNNNTTC	1 cut(s)	651
AspS9I	GGNCC	2 cut(s)	871, 947
AsuC2I	CCSGG	1 cut(s)	19
AsuHPI	GGTGA	4 cut(s)	509, 1072, 1232, 1469
AvaII	GGWCC	2 cut(s)	871, 947
BanII	GRGCYC	1 cut(s)	630
BarI	GAAGNNNNNNTAC	2 cut(s)	1079, 1111
BbsI	GAAGAC	1 cut(s)	1070
Bbv12I	GWGCWC	3 cut(s)	630, 1156, 1410
BbvI	GCAGC	5 cut(s)	198, 650, 724, 1391, 1596
BccI	CCATC	4 cut(s)	113, 236, 1051, 1105
BciT130I	CCWGG	3 cut(s)	893, 1100, 1630
BclI	TGATCA	1 cut(s)	202
BcnI	CCSGG	1 cut(s)	19
BcoDI	GTCTC	2 cut(s)	165, 1078
BfaI	CTAG	2 cut(s)	728, 1673
BfmI	CTRYAG	2 cut(s)	1316, 1383
BglII	AGATCT	2 cut(s)	247, 764
BisI	GCNGC	9 cut(s)	212, 639, 738, 1128, 1188, 1191, 1380, 1559, 1610
BlsI	GCNGC	9 cut(s)	213, 640, 739, 1129, 1189, 1192, 1381, 1560, 1611
Bme1390I	CCNGG	4 cut(s)	19, 893, 1100, 1630
Bme18I	GGWCC	2 cut(s)	871, 947
BmgT120I	GGNCC	2 cut(s)	871, 947
BmiI	GGNNCC	1 cut(s)	949
BmrFI	CCNGG	4 cut(s)	19, 893, 1100, 1630
BmrI	ACTGGG	1 cut(s)	424
BmsI	GCATC	4 cut(s)	220, 242, 409, 832
BmuI	ACTGGG	1 cut(s)	424
BoxI	GACNNNNGTC	1 cut(s)	1070
BpiI	GAAGAC	1 cut(s)	1070
BpuEI	CTTGAG	2 cut(s)	252, 614
BpuMI	CCSGG	1 cut(s)	19
Bsa29I	ATCGAT	1 cut(s)	526
BsaAI	YACGTR	1 cut(s)	379
BsaBI	GATNNNNATC	1 cut(s)	246
BsaJI	CCNNGG	4 cut(s)	493, 1052, 1271, 1629
BsaWI	WCCGGW	1 cut(s)	1156
Bsc4I	CCNNNNNNNGG	4 cut(s)	379, 662, 1294, 1409
Bse1I	ACTGG	4 cut(s)	265, 419, 949, 1403
Bse8I	GATNNNNATC	1 cut(s)	246
BseAI	TCCGGA	1 cut(s)	1156
BseBI	CCWGG	3 cut(s)	893, 1100, 1630
BseCI	ATCGAT	1 cut(s)	526
BseDI	CCNNGG	4 cut(s)	493, 1052, 1271, 1629
BseGI	GGATG	8 cut(s)	124, 235, 424, 927, 998, 1062, 1120, 1495
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	4 cut(s)	379, 662, 1294, 1409
BseMII	CTCAG	2 cut(s)	615, 648
BseNI	ACTGG	4 cut(s)	265, 419, 949, 1403
BseRI	GAGGAG	1 cut(s)	1466
BseXI	GCAGC	5 cut(s)	198, 650, 724, 1391, 1596
BseYI	CCCAGC	2 cut(s)	540, 1538
BsgI	GTGCAG	1 cut(s)	1398
Bsh1285I	CGRYCG	1 cut(s)	1414
BshFI	GGCC	1 cut(s)	674
BshVI	ATCGAT	1 cut(s)	526
BsiEI	CGRYCG	1 cut(s)	1414
BsiHKAI	GWGCWC	3 cut(s)	630, 1156, 1410
BsiSI	CCGG	2 cut(s)	18, 1157
BslFI	GGGAC	2 cut(s)	468, 933
BslI	CCNNNNNNNGG	4 cut(s)	379, 662, 1294, 1409
BsmAI	GTCTC	2 cut(s)	165, 1078
BsmFI	GGGAC	2 cut(s)	468, 933
BsmI	GAATGC	1 cut(s)	28
BsnI	GGCC	1 cut(s)	674
Bsp1286I	GDGCHC	3 cut(s)	630, 1156, 1410
Bsp13I	TCCGGA	1 cut(s)	1156
BspANI	GGCC	1 cut(s)	674
BspCNI	CTCAG	2 cut(s)	616, 649
BspDI	ATCGAT	1 cut(s)	526
BspEI	TCCGGA	1 cut(s)	1156
BspLI	GGNNCC	1 cut(s)	949
BspPI	GGATC	4 cut(s)	271, 522, 523, 552
BsrI	ACTGG	4 cut(s)	265, 419, 949, 1403
BssECI	CCNNGG	4 cut(s)	493, 1052, 1271, 1629
BssNAI	GTATAC	1 cut(s)	171
BssT1I	CCWWGG	2 cut(s)	493, 1271
Bst1107I	GTATAC	1 cut(s)	171
Bst2UI	CCWGG	3 cut(s)	893, 1100, 1630
Bst4CI	ACNGT	4 cut(s)	31, 825, 834, 1175
Bst6I	CTCTTC	2 cut(s)	582, 1221
BstBAI	YACGTR	1 cut(s)	379
BstC8I	GCNNGC	1 cut(s)	636
BstDEI	CTNAG	5 cut(s)	624, 657, 676, 1245, 1589
BstF5I	GGATG	8 cut(s)	124, 235, 424, 927, 998, 1062, 1120, 1495
BstMAI	GTCTC	2 cut(s)	165, 1078
BstMCI	CGRYCG	1 cut(s)	1414
BstMWI	GCNNNNNNNGC	3 cut(s)	217, 1160, 1385
BstNI	CCWGG	3 cut(s)	893, 1100, 1630
BstNSI	RCATGY	2 cut(s)	638, 1136
BstPAI	GACNNNNGTC	1 cut(s)	1070
BstSCI	CCNGG	4 cut(s)	17, 891, 1098, 1628
BstSFI	CTRYAG	2 cut(s)	1316, 1383
BstV1I	GCAGC	5 cut(s)	198, 650, 724, 1391, 1596
BstV2I	GAAGAC	1 cut(s)	1070
BstX2I	RGATCY	4 cut(s)	247, 263, 515, 764
BstYI	RGATCY	4 cut(s)	247, 263, 515, 764
BstZ17I	GTATAC	1 cut(s)	171
Bsu15I	ATCGAT	1 cut(s)	526
BsuRI	GGCC	1 cut(s)	674
BsuTUI	ATCGAT	1 cut(s)	526
BtsCI	GGATG	8 cut(s)	124, 235, 424, 927, 998, 1062, 1120, 1495
BtsI	GCAGTG	1 cut(s)	346
BtsIMutI	CAGTG	5 cut(s)	27, 33, 346, 1377, 1410
Cac8I	GCNNGC	1 cut(s)	636
Cfr13I	GGNCC	2 cut(s)	871, 947
ClaI	ATCGAT	1 cut(s)	526
Csp6I	GTAC	2 cut(s)	549, 1416
CviAII	CATG	6 cut(s)	53, 461, 635, 773, 1133, 1393
CviQI	GTAC	2 cut(s)	549, 1416
DdeI	CTNAG	5 cut(s)	624, 657, 676, 1245, 1589
DraI	TTTAAA	1 cut(s)	282
DraIII	CACNNNGTG	1 cut(s)	1676
Eam1104I	CTCTTC	2 cut(s)	582, 1221
EarI	CTCTTC	2 cut(s)	582, 1221
EciI	GGCGGA	2 cut(s)	1118, 1184
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	2 cut(s)	493, 1271
Eco24I	GRGCYC	1 cut(s)	630
Eco47I	GGWCC	2 cut(s)	871, 947
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	3 cut(s)	57, 830, 1167
EcoICRI	GAGCTC	1 cut(s)	628
EcoO109I	RGGNCCY	1 cut(s)	871
EcoRII	CCWGG	3 cut(s)	891, 1098, 1628
EcoT14I	CCWWGG	2 cut(s)	493, 1271
EcoT22I	ATGCAT	1 cut(s)	235
EcoT38I	GRGCYC	1 cut(s)	630
ErhI	CCWWGG	2 cut(s)	493, 1271
FaeI	CATG	6 cut(s)	56, 464, 638, 776, 1136, 1396
FaqI	GGGAC	2 cut(s)	468, 933
FatI	CATG	6 cut(s)	52, 460, 634, 772, 1132, 1392
FauNDI	CATATG	1 cut(s)	533
FbaI	TGATCA	1 cut(s)	202
FblI	GTMKAC	1 cut(s)	170
Fnu4HI	GCNGC	9 cut(s)	212, 639, 738, 1128, 1188, 1191, 1380, 1559, 1610
FokI	GGATG	8 cut(s)	131, 242, 431, 914, 985, 1069, 1127, 1502
FriOI	GRGCYC	1 cut(s)	630
Fsp4HI	GCNGC	9 cut(s)	212, 639, 738, 1128, 1188, 1191, 1380, 1559, 1610
FspBI	CTAG	2 cut(s)	728, 1673
GluI	GCNGC	9 cut(s)	212, 639, 738, 1128, 1188, 1191, 1380, 1559, 1610
GsaI	CCCAGC	2 cut(s)	544, 1542
HaeIII	GGCC	1 cut(s)	674
HapII	CCGG	2 cut(s)	18, 1157
Hin1II	CATG	6 cut(s)	56, 464, 638, 776, 1136, 1396
HinfI	GANTC	6 cut(s)	592, 620, 1229, 1367, 1444, 1634
HpaII	CCGG	2 cut(s)	18, 1157
HphI	GGTGA	4 cut(s)	509, 1072, 1232, 1469
Hpy166II	GTNNAC	3 cut(s)	171, 409, 837
Hpy188I	TCNGA	8 cut(s)	241, 252, 597, 625, 705, 810, 1053, 1078
Hpy8I	GTNNAC	3 cut(s)	171, 409, 837
HpyAV	CCTTC	7 cut(s)	655, 1117, 1191, 1522, 1528, 1537, 1570
HpyCH4III	ACNGT	4 cut(s)	31, 825, 834, 1175
HpyCH4IV	ACGT	2 cut(s)	378, 613
HpyCH4V	TGCA	7 cut(s)	233, 638, 725, 785, 954, 1379, 1664
HpyF10VI	GCNNNNNNNGC	3 cut(s)	217, 1160, 1385
HpyF3I	CTNAG	5 cut(s)	624, 657, 676, 1245, 1589
HpySE526I	ACGT	2 cut(s)	378, 613
Hsp92II	CATG	6 cut(s)	56, 464, 638, 776, 1136, 1396
Kpn2I	TCCGGA	1 cut(s)	1156
Ksp22I	TGATCA	1 cut(s)	202
LmnI	GCTCC	5 cut(s)	336, 665, 1159, 1326, 1631
Lsp1109I	GCAGC	5 cut(s)	198, 650, 724, 1391, 1596
LweI	GCATC	4 cut(s)	220, 242, 409, 832
MaeI	CTAG	2 cut(s)	728, 1673
MaeII	ACGT	2 cut(s)	378, 613
MaeIII	GTNAC	6 cut(s)	31, 103, 256, 435, 508, 1230
MboII	GAAGA	9 cut(s)	599, 656, 659, 1075, 1099, 1238, 1304, 1310, 1529
MfeI	CAATTG	1 cut(s)	696
MflI	RGATCY	4 cut(s)	247, 263, 515, 764
MhlI	GDGCHC	3 cut(s)	630, 1156, 1410
MluCI	AATT	9 cut(s)	277, 356, 428, 578, 651, 696, 1047, 1118, 1257
MlyI	GAGTC	2 cut(s)	629, 1238
MmeI	TCCRAC	2 cut(s)	955, 1275
Mph1103I	ATGCAT	1 cut(s)	235
MroI	TCCGGA	1 cut(s)	1156
MroXI	GAANNNNTTC	1 cut(s)	651
MseI	TTAA	9 cut(s)	281, 345, 354, 443, 720, 798, 1260, 1502, 1605
MslI	CAYNNNNRTG	2 cut(s)	465, 1397
MspA1I	CMGCKG	5 cut(s)	641, 1187, 1358, 1388, 1561
MspI	CCGG	2 cut(s)	18, 1157
MspR9I	CCNGG	4 cut(s)	19, 893, 1100, 1630
MunI	CAATTG	1 cut(s)	696
Mva1269I	GAATGC	1 cut(s)	28
MvaI	CCWGG	3 cut(s)	893, 1100, 1630
MwoI	GCNNNNNNNGC	3 cut(s)	217, 1160, 1385
NciI	CCSGG	1 cut(s)	19
NdeI	CATATG	1 cut(s)	533
NlaIII	CATG	6 cut(s)	56, 464, 638, 776, 1136, 1396
NlaIV	GGNNCC	1 cut(s)	949
NmuCI	GTSAC	5 cut(s)	31, 103, 256, 508, 1230
NsiI	ATGCAT	1 cut(s)	235
NspI	RCATGY	2 cut(s)	638, 1136
PaeI	GCATGC	1 cut(s)	638
PciI	ACATGT	1 cut(s)	1132
PctI	GAATGC	1 cut(s)	28
PdmI	GAANNNNTTC	1 cut(s)	651
PfeI	GAWTC	4 cut(s)	592, 1367, 1444, 1634
PflMI	CCANNNNNTGG	1 cut(s)	379
PkrI	GCNGC	9 cut(s)	213, 640, 739, 1129, 1189, 1192, 1381, 1560, 1611
PleI	GAGTC	2 cut(s)	628, 1237
PpsI	GAGTC	2 cut(s)	628, 1237
Ppu21I	YACGTR	1 cut(s)	379
PpuMI	RGGWCCY	1 cut(s)	871
PscI	ACATGT	1 cut(s)	1132
PshAI	GACNNNNGTC	1 cut(s)	1070
PshBI	ATTAAT	2 cut(s)	720, 1260
Psp124BI	GAGCTC	1 cut(s)	630
Psp1406I	AACGTT	1 cut(s)	613
Psp5II	RGGWCCY	1 cut(s)	871
Psp6I	CCWGG	3 cut(s)	891, 1098, 1628
PspFI	CCCAGC	2 cut(s)	540, 1538
PspGI	CCWGG	3 cut(s)	891, 1098, 1628
PspN4I	GGNNCC	1 cut(s)	949
PspPI	GGNCC	2 cut(s)	871, 947
PspPPI	RGGWCCY	1 cut(s)	871
PsuI	RGATCY	4 cut(s)	247, 263, 515, 764
PvuII	CAGCTG	1 cut(s)	1358
RsaI	GTAC	2 cut(s)	550, 1417
RsaNI	GTAC	2 cut(s)	549, 1416
RseI	CAYNNNNRTG	2 cut(s)	465, 1397
SacI	GAGCTC	1 cut(s)	630
SaqAI	TTAA	9 cut(s)	281, 345, 354, 443, 720, 798, 1260, 1502, 1605
SatI	GCNGC	9 cut(s)	212, 639, 738, 1128, 1188, 1191, 1380, 1559, 1610
Sau96I	GGNCC	2 cut(s)	871, 947
SchI	GAGTC	2 cut(s)	629, 1238
ScrFI	CCNGG	4 cut(s)	19, 893, 1100, 1630
SduI	GDGCHC	3 cut(s)	630, 1156, 1410
SfaNI	GCATC	4 cut(s)	220, 242, 409, 832
SfcI	CTRYAG	2 cut(s)	1316, 1383
SinI	GGWCC	2 cut(s)	871, 947
SmiMI	CAYNNNNRTG	2 cut(s)	465, 1397
SmlI	CTYRAG	2 cut(s)	267, 629
SmoI	CTYRAG	2 cut(s)	267, 629
SphI	GCATGC	1 cut(s)	638
Sse9I	AATT	9 cut(s)	277, 356, 428, 578, 651, 696, 1047, 1118, 1257
SspMI	CTAG	2 cut(s)	728, 1673
SstI	GAGCTC	1 cut(s)	630
StyD4I	CCNGG	4 cut(s)	17, 891, 1098, 1628
StyI	CCWWGG	2 cut(s)	493, 1271
TaaI	ACNGT	4 cut(s)	31, 825, 834, 1175
TaiI	ACGT	2 cut(s)	381, 616
TaqI	TCGA	2 cut(s)	526, 1348
TaqII	GACCGA	1 cut(s)	1400
TasI	AATT	9 cut(s)	277, 356, 428, 578, 651, 696, 1047, 1118, 1257
TauI	GCSGC	4 cut(s)	1130, 1190, 1193, 1561
TfiI	GAWTC	4 cut(s)	592, 1367, 1444, 1634
Tru1I	TTAA	9 cut(s)	281, 345, 354, 443, 720, 798, 1260, 1502, 1605
Tru9I	TTAA	9 cut(s)	281, 345, 354, 443, 720, 798, 1260, 1502, 1605
TscAI	CASTG	5 cut(s)	34, 40, 346, 1377, 1410
TseFI	GTSAC	5 cut(s)	31, 103, 256, 508, 1230
TseI	GCWGC	5 cut(s)	211, 638, 737, 1379, 1609
Tsp45I	GTSAC	5 cut(s)	31, 103, 256, 508, 1230
TspRI	CASTG	5 cut(s)	34, 40, 346, 1377, 1410
Van91I	CCANNNNNTGG	1 cut(s)	379
VpaK11BI	GGWCC	2 cut(s)	871, 947
VspI	ATTAAT	2 cut(s)	720, 1260
XapI	RAATTY	5 cut(s)	277, 356, 428, 578, 651
XceI	RCATGY	2 cut(s)	638, 1136
XmiI	GTMKAC	1 cut(s)	170
XmnI	GAANNNNTTC	1 cut(s)	651
XspI	CTAG	2 cut(s)	728, 1673
Zsp2I	ATGCAT	1 cut(s)	235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.