Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0007547

Physical Location & Seq

Genomic Coordinates Reverse (-)

90002822 .. 90010557

Gene Structure 7736 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG680400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGTCAACTAGTGATACTGAAGTCAAGCTTTGGAATCCTAGTACCGGTAACTGCCTTCATACTATTGACATTCCAAATCTAGTGAGTGGTTTTATCCTTCCCAATAACAAATATGCACTTGTTGGATCTAAGGGTGGAAATATGGAGATTATTGACACCGGGAATGCCACTGTCACTGAAGTAGTGGAAGCTCATGGTGGTTCTGTTCAATCTATTGTAAGACTTCCCAATGAAAATGGTTTTGTCACAGGAAGTTTGGATGGTTATGTCAAGTTCTGGGAATATGAAGTCAAACAAAAGTCTCCCAAGTATGATTCTAAGCACCTAATGGTGACAATGACAAATGTAAGAACCATGAAAATAGATACTGACGTTCGTGTGGTTGCTGTTAGCCCCGATGCCAGATATATTTTGGTTGCCTTGGACTCCAGAGCAAAGGTTATAAACCCAGACATAGTTAGGCTTTCGACTCTGGAAAACGTGCTGCCTGTGCTATGTATGGATGCATCATCTGATGGAGATCTGATAGTGACTGGATCTCAAGACAAAAATTTAAAGATTTGGGGTTTAGATTTTGGCGACTGCCACAAATCAATGTTCTTTCATAGGAGCAGTGTTAAGCAAGTTAAATTTGTATCAAATACCCATTACGTGGTTAGTGTTGGTAAAGATAAGCAAGTGAACTACTGGGATGCTGATAAATTTGAGTTACTTTTAACTATTGAGGGACACCATGAGGGTGAAGAGAATCAGAAAAGGTTGTTAGAACGTTATGAGTCTGAGCTCAAGCATGCAGCGGAAGAAGAAATTCCTGAGAAGGGAGCTGTGGCCTTAGTGGGAAAGGAAAAAACAATTGATCTGACAGATGAACTTATTAATGCACTAGATGTAGCTGCCGAATATGAGGGAAAAAAGTCCAGATCTGGTCATGTTCTGTATGCACTTTCAAAGATTAAGAGTGATCTGAAGTTGGTGCTACTGTGCTTACCGTTCACAGATGCTTTGAGGCTTTTGCCTTACTTGGAGGACCTTGCTTCATATCCTGACCAGGACTTGATCTCATCATACCCAAAAGTTGAATACATCCAACTTCTCCCAACTGGTCCCTGCAACACACACTCGCTCTACAACACTCTCCCCTACTCTAAATACTCATCCTTATTCCCACACCAATCAAACTCCATTTCAAGATTTGTTTCTCCAATTCCGAGGATGGTGAAGACCAAAGTCTCTGAAATCCCGAAGATTACTTACCAGGCGGATATGATGGATGAATTGAAGGCGGCACATGTTCTTATGGGTATTGGTGCTCCGGAGGCGGTGGCGGACGGTGTTCCTTCAGCGGCGGCGGTGGAGGAAAGCAGATGTGGTGGTGGTGATGAAGAGTCACGCCCAAGTTCTAAGGCTGATGAAATTAATATCCCCCCTTGGACACTAATAATCCCGAAGTTGGAAGATCACACTAATCTTCTACAGCTCCCTGACGATCAGGTTGTGGGTGTTCGACTTCCAGCTGACCTTGATTCAGTGAGTGCAGCTACAGCGGTCATGTTAGTGCCAGTGCTCGGTCGTACTATGAGCCTTTTGAAAAAAGAAATGAATCAGGAGGAGGGTGAGCAAAGAAAGGAGAATAAACATAAGGAGGATGTTATTGTTTTAAGTGATGACGATGAAGATGACGAGAAGGAGAAGGCTGGGAAGGTCTATTCAAAGCCGCTGTTGATGAAAATGAAGGTTGATGACCTTAGACATTTAGCTGTTAAGCTGCGATTGAAAAATAGCTCCTGGGATTCAAAGGAGAAGCTGGTTGATCGTATTGCAAAGGCACTAGGTGTTTGTAATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0012505 GO:0016020 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

615

Amino Acids

68.31

Weight (kDa)

5.37

Isoelectric Point (pI)

35.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_2nd	PF25172	1 - 246	1.4e-77	WDR3 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	3 - 128	9.4e-07	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	3 - 137	6.6e-08	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	4 - 149	1e-07	WDR5 beta-propeller domain
WD40_Prp19	PF24814	35 - 247	1.6e-19	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	35 - 151	8.6e-06	WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	56 - 230	3.6e-12	MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd	PF25047	72 - 246	7.5e-08	TEP-1 second beta-propeller
Beta-prop_EML_2	PF23414	75 - 236	5.2e-10	Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz	PF24807	123 - 244	1e-05	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	162 - 248	3.8e-09	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	163 - 242	5.4e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	164 - 246	4e-12	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	166 - 246	2.7e-10	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007547)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0174141 RchiOBHm_Chr2g0174151 RchiOBHm_Chr5g0012111
rosa_laevigata	RLG00000022250 RLG00000022251
rosa_multiflora	Rmu_sc0003188.1_g000038 Rmu_sc0038402.1_g000002
rosa_roxburghii	Rroxscaffold_2G00078420
rosa_rugosa	Rorug02G0575000 Rorug02G0575100 Rorug02G0575100 Rorug02G0575300 Rorug02G0575400
rosa_samantha	Rh2AG654600 Rh2AG654700 Rh2AG654800 Rh2BG665800 Rh2BG666000 Rh2CG630000 Rh2CG630100 Rh2DG680400 Rh2DG680500 Rh7BG432400
rosa_wichuraiana	Rw2G053730 Rw2G053740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	443
AccB7I	CCANNNNNTGG	1 cut(s)	652
AccIII	TCCGGA	1 cut(s)	1312
AclI	AACGTT	1 cut(s)	769
AclWI	GGATC	2 cut(s)	133, 544
AcsI	RAATTY	4 cut(s)	550, 629, 701, 807
AcuI	CTGAAG	4 cut(s)	39, 198, 986, 1323
AdeI	CACNNNGTG	1 cut(s)	1832
AfaI	GTAC	2 cut(s)	43, 1573
AfiI	CCNNNNNNNGG	5 cut(s)	44, 652, 818, 1450, 1565
AflIII	ACRYGT	1 cut(s)	1288
AgeI	ACCGGT	1 cut(s)	44
AgsI	TTSAA	9 cut(s)	209, 948, 1079, 1188, 1279, 1588, 1710, 1774, 1794
AhlI	ACTAGT	1 cut(s)	8
AjnI	CCWGG	3 cut(s)	1047, 1254, 1784
Alw21I	GWGCWC	3 cut(s)	786, 1312, 1566
Alw26I	GTCTC	2 cut(s)	306, 1234
AlwI	GGATC	2 cut(s)	133, 544
Aor13HI	TCCGGA	1 cut(s)	1312
AoxI	GGCC	1 cut(s)	828
ApeKI	GCWGC	5 cut(s)	484, 794, 893, 1535, 1765
ApoI	RAATTY	4 cut(s)	550, 629, 701, 807
AseI	ATTAAT	2 cut(s)	876, 1416
AsiGI	ACCGGT	1 cut(s)	44
Asp700I	GAANNNNTTC	1 cut(s)	807
AspS9I	GGNCC	2 cut(s)	1027, 1103
AsuC2I	CCSGG	1 cut(s)	160
AsuHPI	GGTGA	5 cut(s)	343, 752, 1228, 1388, 1625
AvaII	GGWCC	2 cut(s)	1027, 1103
BaeI	ACNNNNGTAYC	3 cut(s)	39, 357, 390
BanII	GRGCYC	1 cut(s)	786
BarI	GAAGNNNNNNTAC	2 cut(s)	1235, 1267
BbsI	GAAGAC	1 cut(s)	1226
Bbv12I	GWGCWC	3 cut(s)	786, 1312, 1566
BbvI	GCAGC	5 cut(s)	471, 806, 880, 1547, 1752
BccI	CCATC	4 cut(s)	254, 509, 1207, 1261
BciT130I	CCWGG	3 cut(s)	1049, 1256, 1786
BcnI	CCSGG	1 cut(s)	160
BcoDI	GTCTC	2 cut(s)	306, 1234
BcuI	ACTAGT	1 cut(s)	8
BfaI	CTAG	5 cut(s)	9, 39, 80, 884, 1829
BfmI	CTRYAG	2 cut(s)	1472, 1539
BglII	AGATCT	2 cut(s)	520, 920
BisI	GCNGC	9 cut(s)	485, 795, 894, 1284, 1344, 1347, 1536, 1715, 1766
BlsI	GCNGC	9 cut(s)	486, 796, 895, 1285, 1345, 1348, 1537, 1716, 1767
Bme1390I	CCNGG	4 cut(s)	160, 1049, 1256, 1786
Bme18I	GGWCC	2 cut(s)	1027, 1103
BmgT120I	GGNCC	2 cut(s)	1027, 1103
BmiI	GGNNCC	1 cut(s)	1105
BmrFI	CCNGG	4 cut(s)	160, 1049, 1256, 1786
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	5 cut(s)	388, 493, 515, 682, 988
BmuI	ACTGGG	1 cut(s)	697
BoxI	GACNNNNGTC	1 cut(s)	1226
BpiI	GAAGAC	1 cut(s)	1226
BpmI	CTGGAG	1 cut(s)	412
BpuEI	CTTGAG	2 cut(s)	525, 770
BpuMI	CCSGG	1 cut(s)	160
BsaAI	YACGTR	1 cut(s)	652
BsaBI	GATNNNNATC	1 cut(s)	519
BsaJI	CCNNGG	4 cut(s)	420, 1208, 1427, 1785
BsaWI	WCCGGW	2 cut(s)	44, 1312
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 652, 818, 1450, 1565
Bse118I	RCCGGY	1 cut(s)	44
Bse1I	ACTGG	4 cut(s)	538, 692, 1105, 1559
Bse8I	GATNNNNATC	1 cut(s)	519
BseAI	TCCGGA	1 cut(s)	1312
BseBI	CCWGG	3 cut(s)	1049, 1256, 1786
BseDI	CCNNGG	4 cut(s)	420, 1208, 1427, 1785
BseGI	GGATG	8 cut(s)	265, 508, 697, 1083, 1154, 1218, 1276, 1651
BseJI	GATNNNNATC	1 cut(s)	519
BseLI	CCNNNNNNNGG	5 cut(s)	44, 652, 818, 1450, 1565
BseMII	CTCAG	2 cut(s)	771, 804
BseNI	ACTGG	4 cut(s)	538, 692, 1105, 1559
BseRI	GAGGAG	1 cut(s)	1622
BseXI	GCAGC	5 cut(s)	471, 806, 880, 1547, 1752
BseYI	CCCAGC	1 cut(s)	1694
BsgI	GTGCAG	1 cut(s)	1554
Bsh1285I	CGRYCG	1 cut(s)	1570
BshFI	GGCC	1 cut(s)	830
BshTI	ACCGGT	1 cut(s)	44
BsiEI	CGRYCG	1 cut(s)	1570
BsiHKAI	GWGCWC	3 cut(s)	786, 1312, 1566
BsiSI	CCGG	3 cut(s)	45, 159, 1313
BslFI	GGGAC	2 cut(s)	741, 1089
BslI	CCNNNNNNNGG	5 cut(s)	44, 652, 818, 1450, 1565
BsmAI	GTCTC	2 cut(s)	306, 1234
BsmFI	GGGAC	2 cut(s)	741, 1089
BsmI	GAATGC	1 cut(s)	169
BsnI	GGCC	1 cut(s)	830
Bsp1286I	GDGCHC	3 cut(s)	786, 1312, 1566
Bsp13I	TCCGGA	1 cut(s)	1312
BspANI	GGCC	1 cut(s)	830
BspCNI	CTCAG	2 cut(s)	772, 805
BspEI	TCCGGA	1 cut(s)	1312
BspLI	GGNNCC	1 cut(s)	1105
BspPI	GGATC	2 cut(s)	133, 544
BsrFI	RCCGGY	1 cut(s)	44
BsrI	ACTGG	4 cut(s)	538, 692, 1105, 1559
BssAI	RCCGGY	1 cut(s)	44
BssECI	CCNNGG	4 cut(s)	420, 1208, 1427, 1785
BssT1I	CCWWGG	2 cut(s)	420, 1427
Bst2UI	CCWGG	3 cut(s)	1049, 1256, 1786
Bst4CI	ACNGT	4 cut(s)	172, 981, 990, 1331
Bst6I	CTCTTC	2 cut(s)	738, 1377
BstBAI	YACGTR	1 cut(s)	652
BstC8I	GCNNGC	1 cut(s)	792
BstDEI	CTNAG	7 cut(s)	129, 318, 780, 813, 832, 1401, 1745
BstF5I	GGATG	8 cut(s)	265, 508, 697, 1083, 1154, 1218, 1276, 1651
BstMAI	GTCTC	2 cut(s)	306, 1234
BstMCI	CGRYCG	1 cut(s)	1570
BstMWI	GCNNNNNNNGC	3 cut(s)	490, 1316, 1541
BstNI	CCWGG	3 cut(s)	1049, 1256, 1786
BstNSI	RCATGY	2 cut(s)	794, 1292
BstPAI	GACNNNNGTC	1 cut(s)	1226
BstSCI	CCNGG	4 cut(s)	158, 1047, 1254, 1784
BstSFI	CTRYAG	2 cut(s)	1472, 1539
BstV1I	GCAGC	5 cut(s)	471, 806, 880, 1547, 1752
BstV2I	GAAGAC	1 cut(s)	1226
BstX2I	RGATCY	4 cut(s)	125, 520, 536, 920
BstYI	RGATCY	4 cut(s)	125, 520, 536, 920
BsuRI	GGCC	1 cut(s)	830
BtsCI	GGATG	8 cut(s)	265, 508, 697, 1083, 1154, 1218, 1276, 1651
BtsI	GCAGTG	1 cut(s)	619
BtsIMutI	CAGTG	5 cut(s)	168, 174, 619, 1533, 1566
Cac8I	GCNNGC	1 cut(s)	792
Cfr10I	RCCGGY	1 cut(s)	44
Cfr13I	GGNCC	2 cut(s)	1027, 1103
Csp6I	GTAC	2 cut(s)	42, 1572
CspAI	ACCGGT	1 cut(s)	44
CviAII	CATG	7 cut(s)	194, 355, 734, 791, 929, 1289, 1549
CviQI	GTAC	2 cut(s)	42, 1572
DdeI	CTNAG	7 cut(s)	129, 318, 780, 813, 832, 1401, 1745
DraI	TTTAAA	1 cut(s)	555
DraIII	CACNNNGTG	1 cut(s)	1832
Eam1104I	CTCTTC	2 cut(s)	738, 1377
EarI	CTCTTC	2 cut(s)	738, 1377
EciI	GGCGGA	2 cut(s)	1274, 1340
Ecl136II	GAGCTC	1 cut(s)	784
Eco130I	CCWWGG	2 cut(s)	420, 1427
Eco24I	GRGCYC	1 cut(s)	786
Eco47I	GGWCC	2 cut(s)	1027, 1103
Eco53kI	GAGCTC	1 cut(s)	784
Eco57I	CTGAAG	4 cut(s)	39, 198, 986, 1323
EcoICRI	GAGCTC	1 cut(s)	784
EcoO109I	RGGNCCY	1 cut(s)	1027
EcoRII	CCWGG	3 cut(s)	1047, 1254, 1784
EcoT14I	CCWWGG	2 cut(s)	420, 1427
EcoT22I	ATGCAT	1 cut(s)	508
EcoT38I	GRGCYC	1 cut(s)	786
ErhI	CCWWGG	2 cut(s)	420, 1427
FaeI	CATG	7 cut(s)	197, 358, 737, 794, 932, 1292, 1552
FalI	AAGNNNNNCTT	2 cut(s)	12, 44
FaqI	GGGAC	2 cut(s)	741, 1089
FatI	CATG	7 cut(s)	193, 354, 733, 790, 928, 1288, 1548
Fnu4HI	GCNGC	9 cut(s)	485, 795, 894, 1284, 1344, 1347, 1536, 1715, 1766
FokI	GGATG	8 cut(s)	272, 515, 704, 1070, 1141, 1225, 1283, 1658
FriOI	GRGCYC	1 cut(s)	786
Fsp4HI	GCNGC	9 cut(s)	485, 795, 894, 1284, 1344, 1347, 1536, 1715, 1766
FspBI	CTAG	5 cut(s)	9, 39, 80, 884, 1829
GluI	GCNGC	9 cut(s)	485, 795, 894, 1284, 1344, 1347, 1536, 1715, 1766
GsaI	CCCAGC	1 cut(s)	1698
GsuI	CTGGAG	1 cut(s)	412
HaeIII	GGCC	1 cut(s)	830
HapII	CCGG	3 cut(s)	45, 159, 1313
Hin1II	CATG	7 cut(s)	197, 358, 737, 794, 932, 1292, 1552
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	1 cut(s)	26
HpaII	CCGG	3 cut(s)	45, 159, 1313
HphI	GGTGA	5 cut(s)	343, 752, 1228, 1388, 1625
Hpy166II	GTNNAC	3 cut(s)	6, 682, 993
Hpy188I	TCNGA	8 cut(s)	514, 525, 753, 781, 861, 966, 1209, 1234
Hpy8I	GTNNAC	3 cut(s)	6, 682, 993
HpyAV	CCTTC	9 cut(s)	65, 107, 811, 1273, 1347, 1678, 1684, 1693, 1726
HpyCH4III	ACNGT	4 cut(s)	172, 981, 990, 1331
HpyCH4IV	ACGT	4 cut(s)	372, 480, 651, 769
HpyCH4V	TGCA	8 cut(s)	116, 506, 794, 881, 941, 1110, 1535, 1820
HpyF10VI	GCNNNNNNNGC	3 cut(s)	490, 1316, 1541
HpyF3I	CTNAG	7 cut(s)	129, 318, 780, 813, 832, 1401, 1745
HpySE526I	ACGT	4 cut(s)	372, 480, 651, 769
Hsp92II	CATG	7 cut(s)	197, 358, 737, 794, 932, 1292, 1552
Kpn2I	TCCGGA	1 cut(s)	1312
LmnI	GCTCC	5 cut(s)	609, 821, 1315, 1482, 1787
Lsp1109I	GCAGC	5 cut(s)	471, 806, 880, 1547, 1752
LweI	GCATC	5 cut(s)	388, 493, 515, 682, 988
MaeI	CTAG	5 cut(s)	9, 39, 80, 884, 1829
MaeII	ACGT	4 cut(s)	372, 480, 651, 769
MaeIII	GTNAC	7 cut(s)	47, 172, 244, 331, 529, 708, 1386
MboII	GAAGA	9 cut(s)	755, 812, 815, 1231, 1255, 1394, 1460, 1466, 1685
MfeI	CAATTG	1 cut(s)	852
MflI	RGATCY	4 cut(s)	125, 520, 536, 920
MhlI	GDGCHC	3 cut(s)	786, 1312, 1566
MluCI	AATT	8 cut(s)	550, 629, 701, 807, 852, 1203, 1274, 1413
MlyI	GAGTC	4 cut(s)	419, 463, 785, 1394
MmeI	TCCRAC	3 cut(s)	103, 1111, 1431
Mph1103I	ATGCAT	1 cut(s)	508
MroI	TCCGGA	1 cut(s)	1312
MroXI	GAANNNNTTC	1 cut(s)	807
MseI	TTAA	9 cut(s)	554, 618, 627, 716, 876, 954, 1416, 1658, 1761
MslI	CAYNNNNRTG	2 cut(s)	738, 1553
MspA1I	CMGCKG	5 cut(s)	797, 1343, 1514, 1544, 1717
MspI	CCGG	3 cut(s)	45, 159, 1313
MspR9I	CCNGG	4 cut(s)	160, 1049, 1256, 1786
MunI	CAATTG	1 cut(s)	852
Mva1269I	GAATGC	1 cut(s)	169
MvaI	CCWGG	3 cut(s)	1049, 1256, 1786
MwoI	GCNNNNNNNGC	3 cut(s)	490, 1316, 1541
NciI	CCSGG	1 cut(s)	160
NlaIII	CATG	7 cut(s)	197, 358, 737, 794, 932, 1292, 1552
NlaIV	GGNNCC	1 cut(s)	1105
NmuCI	GTSAC	5 cut(s)	172, 244, 331, 529, 1386
NsiI	ATGCAT	1 cut(s)	508
NspI	RCATGY	2 cut(s)	794, 1292
PaeI	GCATGC	1 cut(s)	794
PciI	ACATGT	1 cut(s)	1288
PctI	GAATGC	1 cut(s)	169
PdmI	GAANNNNTTC	1 cut(s)	807
PfeI	GAWTC	6 cut(s)	34, 314, 748, 1523, 1600, 1790
PflMI	CCANNNNNTGG	1 cut(s)	652
PinAI	ACCGGT	1 cut(s)	44
PkrI	GCNGC	9 cut(s)	486, 796, 895, 1285, 1345, 1348, 1537, 1716, 1767
PleI	GAGTC	4 cut(s)	419, 463, 784, 1393
PpsI	GAGTC	4 cut(s)	419, 463, 784, 1393
Ppu21I	YACGTR	1 cut(s)	652
PpuMI	RGGWCCY	1 cut(s)	1027
PscI	ACATGT	1 cut(s)	1288
PshAI	GACNNNNGTC	1 cut(s)	1226
PshBI	ATTAAT	2 cut(s)	876, 1416
PsiI	TTATAA	1 cut(s)	443
Psp124BI	GAGCTC	1 cut(s)	786
Psp1406I	AACGTT	1 cut(s)	769
Psp5II	RGGWCCY	1 cut(s)	1027
Psp6I	CCWGG	3 cut(s)	1047, 1254, 1784
PspFI	CCCAGC	1 cut(s)	1694
PspGI	CCWGG	3 cut(s)	1047, 1254, 1784
PspN4I	GGNNCC	1 cut(s)	1105
PspPI	GGNCC	2 cut(s)	1027, 1103
PspPPI	RGGWCCY	1 cut(s)	1027
PsuI	RGATCY	4 cut(s)	125, 520, 536, 920
PvuII	CAGCTG	1 cut(s)	1514
RsaI	GTAC	2 cut(s)	43, 1573
RsaNI	GTAC	2 cut(s)	42, 1572
RseI	CAYNNNNRTG	2 cut(s)	738, 1553
SacI	GAGCTC	1 cut(s)	786
SaqAI	TTAA	9 cut(s)	554, 618, 627, 716, 876, 954, 1416, 1658, 1761
SatI	GCNGC	9 cut(s)	485, 795, 894, 1284, 1344, 1347, 1536, 1715, 1766
Sau96I	GGNCC	2 cut(s)	1027, 1103
SchI	GAGTC	4 cut(s)	419, 463, 785, 1394
ScrFI	CCNGG	4 cut(s)	160, 1049, 1256, 1786
SduI	GDGCHC	3 cut(s)	786, 1312, 1566
SfaNI	GCATC	5 cut(s)	388, 493, 515, 682, 988
SfcI	CTRYAG	2 cut(s)	1472, 1539
SinI	GGWCC	2 cut(s)	1027, 1103
SmiMI	CAYNNNNRTG	2 cut(s)	738, 1553
SmlI	CTYRAG	2 cut(s)	540, 785
SmoI	CTYRAG	2 cut(s)	540, 785
SpeI	ACTAGT	1 cut(s)	8
SphI	GCATGC	1 cut(s)	794
Sse9I	AATT	8 cut(s)	550, 629, 701, 807, 852, 1203, 1274, 1413
SspMI	CTAG	5 cut(s)	9, 39, 80, 884, 1829
SstI	GAGCTC	1 cut(s)	786
StyD4I	CCNGG	4 cut(s)	158, 1047, 1254, 1784
StyI	CCWWGG	2 cut(s)	420, 1427
TaaI	ACNGT	4 cut(s)	172, 981, 990, 1331
TaiI	ACGT	4 cut(s)	375, 483, 654, 772
TaqI	TCGA	2 cut(s)	467, 1504
TaqII	GACCGA	1 cut(s)	1556
TasI	AATT	8 cut(s)	550, 629, 701, 807, 852, 1203, 1274, 1413
TauI	GCSGC	4 cut(s)	1286, 1346, 1349, 1717
TfiI	GAWTC	6 cut(s)	34, 314, 748, 1523, 1600, 1790
Tru1I	TTAA	9 cut(s)	554, 618, 627, 716, 876, 954, 1416, 1658, 1761
Tru9I	TTAA	9 cut(s)	554, 618, 627, 716, 876, 954, 1416, 1658, 1761
TscAI	CASTG	5 cut(s)	175, 181, 619, 1533, 1566
TseFI	GTSAC	5 cut(s)	172, 244, 331, 529, 1386
TseI	GCWGC	5 cut(s)	484, 794, 893, 1535, 1765
Tsp45I	GTSAC	5 cut(s)	172, 244, 331, 529, 1386
TspRI	CASTG	5 cut(s)	175, 181, 619, 1533, 1566
Van91I	CCANNNNNTGG	1 cut(s)	652
VpaK11BI	GGWCC	2 cut(s)	1027, 1103
VspI	ATTAAT	2 cut(s)	876, 1416
XapI	RAATTY	4 cut(s)	550, 629, 701, 807
XceI	RCATGY	2 cut(s)	794, 1292
XcmI	CCANNNNNNNNNTGG	1 cut(s)	409
XmnI	GAANNNNTTC	1 cut(s)	807
XspI	CTAG	5 cut(s)	9, 39, 80, 884, 1829
Zsp2I	ATGCAT	1 cut(s)	508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.