No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0137291 |
| rosa_laevigata | RLG00000001724 RLG00000009243 RLG00000019648 RLG00000020216 RLG00000021354 RLG00000023888 RLG00000035110 RLG00000035642 RLG00000036443 |
| rosa_multiflora | Rmu_sc0000762.1_g000066 |
| rosa_roxburghii | Rroxscaffold_2G00080800 |
| rosa_rugosa | Rorug02G0340800 |
| rosa_samantha | Rh1AG052000 Rh1AG321500 Rh2AG389100 Rh2BG396900 Rh2CG340900 Rh2DG045100 Rh2DG411900 Rh4AG363900 Rh5BG170700 Rh5CG354900 Rh5CG408700 Rh5DG398700 Rh6AG362600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 249 |
| AccII | CGCG | 1 cut(s) | 105 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 249 |
| AoxI | GGCC | 2 cut(s) | 18, 225 |
| ApeKI | GCWGC | 5 cut(s) | 100, 194, 203, 215, 218 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 160 |
| AspLEI | GCGC | 1 cut(s) | 105 |
| AspS9I | GGNCC | 1 cut(s) | 226 |
| BbvI | GCAGC | 5 cut(s) | 112, 181, 190, 202, 205 |
| BclI | TGATCA | 1 cut(s) | 129 |
| BisI | GCNGC | 5 cut(s) | 101, 195, 204, 216, 219 |
| BlsI | GCNGC | 5 cut(s) | 102, 196, 205, 217, 220 |
| BmgT120I | GGNCC | 1 cut(s) | 226 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 249 |
| Bse3DI | GCAATG | 1 cut(s) | 95 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 249 |
| BseMI | GCAATG | 1 cut(s) | 95 |
| BseRI | GAGGAG | 1 cut(s) | 166 |
| BseXI | GCAGC | 5 cut(s) | 112, 181, 190, 202, 205 |
| BsgI | GTGCAG | 1 cut(s) | 119 |
| Bsh1236I | CGCG | 1 cut(s) | 105 |
| BshFI | GGCC | 2 cut(s) | 20, 227 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 249 |
| BsnI | GGCC | 2 cut(s) | 20, 227 |
| Bsp143I | GATC | 3 cut(s) | 52, 129, 253 |
| BspANI | GGCC | 2 cut(s) | 20, 227 |
| BspFNI | CGCG | 1 cut(s) | 105 |
| BsrDI | GCAATG | 1 cut(s) | 95 |
| BssMI | GATC | 3 cut(s) | 52, 129, 253 |
| BstDEI | CTNAG | 1 cut(s) | 230 |
| BstFNI | CGCG | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 105 |
| BstKTI | GATC | 3 cut(s) | 55, 132, 256 |
| BstMBI | GATC | 3 cut(s) | 52, 129, 253 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 200, 203, 212, 224 |
| BstUI | CGCG | 1 cut(s) | 105 |
| BstV1I | GCAGC | 5 cut(s) | 112, 181, 190, 202, 205 |
| BsuRI | GGCC | 2 cut(s) | 20, 227 |
| CfoI | GCGC | 1 cut(s) | 105 |
| Cfr13I | GGNCC | 1 cut(s) | 226 |
| CviAII | CATG | 1 cut(s) | 133 |
| CviJI | RGCY | 6 cut(s) | 8, 20, 70, 161, 215, 227 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 20, 70, 161, 215, 227 |
| DdeI | CTNAG | 1 cut(s) | 230 |
| DpnI | GATC | 3 cut(s) | 54, 131, 255 |
| DpnII | GATC | 3 cut(s) | 52, 129, 253 |
| FaeI | CATG | 1 cut(s) | 136 |
| FaiI | YATR | 6 cut(s) | 57, 75, 77, 123, 134, 209 |
| FatI | CATG | 1 cut(s) | 132 |
| FbaI | TGATCA | 1 cut(s) | 129 |
| Fnu4HI | GCNGC | 5 cut(s) | 101, 195, 204, 216, 219 |
| Fsp4HI | GCNGC | 5 cut(s) | 101, 195, 204, 216, 219 |
| GlaI | GCGC | 1 cut(s) | 104 |
| GluI | GCNGC | 5 cut(s) | 101, 195, 204, 216, 219 |
| HaeIII | GGCC | 2 cut(s) | 20, 227 |
| HhaI | GCGC | 1 cut(s) | 105 |
| Hin1II | CATG | 1 cut(s) | 136 |
| Hin6I | GCGC | 1 cut(s) | 103 |
| HinP1I | GCGC | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 1 cut(s) | 139 |
| HpyAV | CCTTC | 3 cut(s) | 10, 60, 88 |
| HpyCH4V | TGCA | 1 cut(s) | 100 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 200, 203, 212, 224 |
| HpyF3I | CTNAG | 1 cut(s) | 230 |
| Hsp92II | CATG | 1 cut(s) | 136 |
| HspAI | GCGC | 1 cut(s) | 103 |
| Ksp22I | TGATCA | 1 cut(s) | 129 |
| Kzo9I | GATC | 3 cut(s) | 52, 129, 253 |
| Lsp1109I | GCAGC | 5 cut(s) | 112, 181, 190, 202, 205 |
| MalI | GATC | 3 cut(s) | 54, 131, 255 |
| MboI | GATC | 3 cut(s) | 52, 129, 253 |
| MboII | GAAGA | 1 cut(s) | 156 |
| MnlI | CCTC | 1 cut(s) | 144 |
| MroXI | GAANNNNTTC | 1 cut(s) | 160 |
| MvnI | CGCG | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 200, 203, 212, 224 |
| NdeII | GATC | 3 cut(s) | 52, 129, 253 |
| NlaIII | CATG | 1 cut(s) | 136 |
| PdmI | GAANNNNTTC | 1 cut(s) | 160 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 249 |
| PkrI | GCNGC | 5 cut(s) | 102, 196, 205, 217, 220 |
| PspPI | GGNCC | 1 cut(s) | 226 |
| SatI | GCNGC | 5 cut(s) | 101, 195, 204, 216, 219 |
| Sau3AI | GATC | 3 cut(s) | 52, 129, 253 |
| Sau96I | GGNCC | 1 cut(s) | 226 |
| SetI | ASST | 1 cut(s) | 99 |
| SgeI | CNNG | 5 cut(s) | 116, 145, 159, 185, 251 |
| TseI | GCWGC | 5 cut(s) | 100, 194, 203, 215, 218 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 249 |
| XmnI | GAANNNNTTC | 1 cut(s) | 160 |