f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0462581 |
| rosa_laevigata | RLG00000017278 |
| rosa_multiflora | Rmu_sc0000131.1_g000003 Rmu_sc0001878.1_g000009 Rmu_sc0002535.1_g000043 Rmu_sc0002882.1_g000002 Rmu_sc0003624.1_g000024 Rmu_sc0004368.1_g000020 Rmu_sc0006173.1_g000034 Rmu_sc0007069.1_g000001 Rmu_sc0008769.1_g000019 Rmu_sc0009999.1_g000001 Rmu_sc0011951.1_g000011 Rmu_sc0014067.1_g000007 Rmu_ssc0000278.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00029870 Rroxscaffold_1G00036950 Rroxscaffold_3G00245630 |
| rosa_samantha | Rh3BG119300 Rh3DG121400 Rh5BG126400 Rh5BG245600 Rh5CG377300 Rh5CG481900 Rh5DG254300 Rh6DG193900 Rh7BG174200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 226 |
| AccII | CGCG | 1 cut(s) | 14 |
| AciI | CCGC | 3 cut(s) | 12, 127, 159 |
| AclWI | GGATC | 1 cut(s) | 58 |
| AgsI | TTSAA | 2 cut(s) | 34, 215 |
| AluBI | AGCT | 2 cut(s) | 40, 221 |
| AluI | AGCT | 2 cut(s) | 40, 221 |
| AlwI | GGATC | 1 cut(s) | 58 |
| AoxI | GGCC | 1 cut(s) | 174 |
| AspLEI | GCGC | 1 cut(s) | 106 |
| AspS9I | GGNCC | 1 cut(s) | 174 |
| AsuC2I | CCSGG | 1 cut(s) | 178 |
| BanII | GRGCYC | 1 cut(s) | 169 |
| BceAI | ACGGC | 1 cut(s) | 68 |
| BcnI | CCSGG | 1 cut(s) | 178 |
| BfoI | RGCGCY | 1 cut(s) | 107 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 173 |
| BisI | GCNGC | 1 cut(s) | 128 |
| BlsI | GCNGC | 1 cut(s) | 129 |
| Bme1390I | CCNGG | 1 cut(s) | 178 |
| BmgT120I | GGNCC | 1 cut(s) | 174 |
| BmiI | GGNNCC | 3 cut(s) | 67, 131, 166 |
| BmrFI | CCNGG | 1 cut(s) | 178 |
| BmsI | GCATC | 1 cut(s) | 17 |
| BpuEI | CTTGAG | 1 cut(s) | 183 |
| BpuMI | CCSGG | 1 cut(s) | 178 |
| BsaJI | CCNNGG | 1 cut(s) | 133 |
| Bse3DI | GCAATG | 1 cut(s) | 31 |
| BseDI | CCNNGG | 1 cut(s) | 133 |
| BseGI | GGATG | 1 cut(s) | 8 |
| BseMI | GCAATG | 1 cut(s) | 31 |
| Bsh1236I | CGCG | 1 cut(s) | 14 |
| BshFI | GGCC | 1 cut(s) | 176 |
| BsiSI | CCGG | 1 cut(s) | 177 |
| BsnI | GGCC | 1 cut(s) | 176 |
| Bsp1286I | GDGCHC | 1 cut(s) | 169 |
| Bsp143I | GATC | 1 cut(s) | 50 |
| BspACI | CCGC | 3 cut(s) | 12, 127, 159 |
| BspANI | GGCC | 1 cut(s) | 176 |
| BspFNI | CGCG | 1 cut(s) | 14 |
| BspLI | GGNNCC | 3 cut(s) | 67, 131, 166 |
| BspPI | GGATC | 1 cut(s) | 58 |
| BsrDI | GCAATG | 1 cut(s) | 31 |
| BssECI | CCNNGG | 1 cut(s) | 133 |
| BssMI | GATC | 1 cut(s) | 50 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDSI | CCRYGG | 1 cut(s) | 133 |
| BstF5I | GGATG | 1 cut(s) | 8 |
| BstFNI | CGCG | 1 cut(s) | 14 |
| BstH2I | RGCGCY | 1 cut(s) | 107 |
| BstHHI | GCGC | 1 cut(s) | 106 |
| BstKTI | GATC | 1 cut(s) | 53 |
| BstMBI | GATC | 1 cut(s) | 50 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 173 |
| BstSCI | CCNGG | 1 cut(s) | 176 |
| BstUI | CGCG | 1 cut(s) | 14 |
| BsuRI | GGCC | 1 cut(s) | 176 |
| BtgI | CCRYGG | 1 cut(s) | 133 |
| BtsCI | GGATG | 1 cut(s) | 8 |
| BtsIMutI | CAGTG | 1 cut(s) | 126 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CfoI | GCGC | 1 cut(s) | 106 |
| Cfr13I | GGNCC | 1 cut(s) | 174 |
| CviJI | RGCY | 6 cut(s) | 40, 68, 130, 167, 176, 221 |
| CviKI_1 | RGCY | 6 cut(s) | 40, 68, 130, 167, 176, 221 |
| DpnI | GATC | 1 cut(s) | 52 |
| DpnII | GATC | 1 cut(s) | 50 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| Eco24I | GRGCYC | 1 cut(s) | 169 |
| EcoT38I | GRGCYC | 1 cut(s) | 169 |
| FaiI | YATR | 2 cut(s) | 55, 226 |
| Fnu4HI | GCNGC | 1 cut(s) | 128 |
| FriOI | GRGCYC | 1 cut(s) | 169 |
| Fsp4HI | GCNGC | 1 cut(s) | 128 |
| GlaI | GCGC | 1 cut(s) | 105 |
| GluI | GCNGC | 1 cut(s) | 128 |
| HaeII | RGCGCY | 1 cut(s) | 107 |
| HaeIII | GGCC | 1 cut(s) | 176 |
| HapII | CCGG | 1 cut(s) | 177 |
| HhaI | GCGC | 1 cut(s) | 106 |
| Hin6I | GCGC | 1 cut(s) | 104 |
| HinP1I | GCGC | 1 cut(s) | 104 |
| HpaII | CCGG | 1 cut(s) | 177 |
| Hpy188I | TCNGA | 2 cut(s) | 65, 149 |
| Hpy188III | TCNNGA | 1 cut(s) | 200 |
| HpyAV | CCTTC | 1 cut(s) | 70 |
| HpyCH4V | TGCA | 1 cut(s) | 24 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 173 |
| HspAI | GCGC | 1 cut(s) | 104 |
| Kzo9I | GATC | 1 cut(s) | 50 |
| LmnI | GCTCC | 3 cut(s) | 65, 135, 164 |
| LpnPI | CCDG | 3 cut(s) | 58, 92, 190 |
| LweI | GCATC | 1 cut(s) | 17 |
| MalI | GATC | 1 cut(s) | 52 |
| MboI | GATC | 1 cut(s) | 50 |
| MboII | GAAGA | 3 cut(s) | 28, 46, 122 |
| MhlI | GDGCHC | 1 cut(s) | 169 |
| MluCI | AATT | 2 cut(s) | 94, 205 |
| MmeI | TCCRAC | 1 cut(s) | 127 |
| MspI | CCGG | 1 cut(s) | 177 |
| MspR9I | CCNGG | 1 cut(s) | 178 |
| MvnI | CGCG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 173 |
| NciI | CCSGG | 1 cut(s) | 178 |
| NdeII | GATC | 1 cut(s) | 50 |
| NlaIV | GGNNCC | 3 cut(s) | 67, 131, 166 |
| PkrI | GCNGC | 1 cut(s) | 129 |
| PsiI | TTATAA | 1 cut(s) | 226 |
| PspN4I | GGNNCC | 3 cut(s) | 67, 131, 166 |
| PspPI | GGNCC | 1 cut(s) | 174 |
| SatI | GCNGC | 1 cut(s) | 128 |
| Sau3AI | GATC | 1 cut(s) | 50 |
| Sau96I | GGNCC | 1 cut(s) | 174 |
| ScrFI | CCNGG | 1 cut(s) | 178 |
| SduI | GDGCHC | 1 cut(s) | 169 |
| SetI | ASST | 3 cut(s) | 42, 62, 223 |
| SfaNI | GCATC | 1 cut(s) | 17 |
| SmlI | CTYRAG | 1 cut(s) | 198 |
| SmoI | CTYRAG | 1 cut(s) | 198 |
| Sse9I | AATT | 2 cut(s) | 94, 205 |
| SsiI | CCGC | 3 cut(s) | 12, 127, 159 |
| StyD4I | CCNGG | 1 cut(s) | 176 |
| TasI | AATT | 2 cut(s) | 94, 205 |
| TauI | GCSGC | 1 cut(s) | 130 |
| TscAI | CASTG | 1 cut(s) | 126 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspGWI | ACGGA | 1 cut(s) | 122 |
| TspRI | CASTG | 1 cut(s) | 126 |