Rh4BG227200

mitochondrial fission

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0009680
Physical Location & Seq
Forward (+)
39118494 .. 39119732
1239 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG227200.1

Sequence Viewer

Length: 1239 bp
ATGGGGAGAAAGAGAAAAAACAAATCATCAAGAGGTTCCAAAGAAAGAAAGACCAGATCAGAAGTGGGAGTAGCAAACCAAGATGCTGTAGTTCCTCGCCGCAAGATCCGACATGTCATCAATTCTTGCAAGGAGGAAGGGATTGAAATTCCAGTCCCAACCAGAGCTAGAGACTTGCCAGAGATTGCTAAGAAGATCGATGCCAAGCTCAGTTACTGCCTCTCGGAACTTAATTTGCTGCCTGCTAGTATTTCATCGGTTGATGAGGCGGTTGCCACTTTCATGCAACTGGTGGCATTGTCCAAAGAATCTCTCATAAAAATTCTTGTGAGAGGAGAATTTGATGAGTATCCTGATGACAAGAGCATGCACGGCACTGCAAACCTGGCTGAGATGCTCAATCAGTTCAAGGATGAACGTGGCTGGCTGCATTCCAGCTTTTTCCGACGTGACCTCAAAAGTAACTTCCTACAGTCGGAGATCAACTACTGTATGTTTACTCAGCAGGTGGGAAAAGCCAGTGGTCTTGCAGAGAAACTTGCCGCGGATCTTACAGCAGATCTAGTCGCGGTGGAACATCACCATGATTCCTGGTTTCTGGATATGTTCTGGTATTACGCGATCATGCAAGTAACTCGTTCTGTGTTAATGACTTATCTATCGAGATATGTTCATTTTTGTATTCATGTTGTGTCACTTGTTTATAATCTAATGGACAAGATGATTCAGAGGTCGTATCAATGGACGCATGAGAACTATTATACCGTGAATGTGAATGAGGAAAAAACGGATGAGTTTTTTTCCGAGTATACTAGACTTATGTTCAAATGCAATGTATTCATCCATGGAGTCCTTGATGATCCGGAAAAGCCCTCTACAATTATTGTAGACGGTATTGGGGAGATTGTAGTTGAAGGTCTCAGGAGTTACTCGCGTGATCTACTATCTGAAGCCTTTAGCGTCAGAATGCAATCAATTGCATTTCGGAAGATACATATAGAAACTTTTATTGAAGGTATGGCTTCTCATTTGCAGTCGAGTGTTGCAAACCTTCTGGACACATACATGGATTTGGAGATGTTTGATATGCAGATCTTGAAGAGGCCACATTTTGCTCATGTATTTGAGGATATGGTTGAGAACTATCCCTTGGCACGCAAGGGTCTTGAAAAGAGAATCAATATGCTCAAGAAAGCTAAGGAGATTTGTGAGGGGATCATGGATACTTATGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ Dynamin_N

Protein Analysis

412

Amino Acids

47.73

Weight (kDa)

6.19

Isoelectric Point (pI)

44.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_M PF01031 58 - 179 1.7e-08 Dynamin central region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 705
AarI CACCTGC 1 cut(s) 496
Acc36I ACCTGC 1 cut(s) 496
AccI GTMKAC 2 cut(s) 809, 888
AccII CGCG 4 cut(s) 545, 569, 620, 934
AccIII TCCGGA 1 cut(s) 862
AciI CCGC 5 cut(s) 100, 269, 543, 545, 569
AclWI GGATC 4 cut(s) 100, 555, 854, 1223
AcsI RAATTY 3 cut(s) 147, 321, 338
AcuI CTGAAG 1 cut(s) 969
AfiI CCNNNNNNNGG 1 cut(s) 475
AflIII ACRYGT 1 cut(s) 112
AgsI TTSAA 7 cut(s) 146, 409, 826, 914, 1013, 1099, 1169
AjiI CACGTC 1 cut(s) 449
AjnI CCWGG 2 cut(s) 384, 590
AjuI GAANNNNNNNTTGG 2 cut(s) 1133, 1165
AluBI AGCT 4 cut(s) 167, 208, 438, 1196
AluI AGCT 4 cut(s) 167, 208, 438, 1196
Alw26I GTCTC 2 cut(s) 165, 923
AlwI GGATC 4 cut(s) 100, 555, 854, 1223
AlwNI CAGNNNCTG 1 cut(s) 216
Aor13HI TCCGGA 1 cut(s) 862
AoxI GGCC 1 cut(s) 1103
ApeKI GCWGC 2 cut(s) 238, 427
ApoI RAATTY 3 cut(s) 147, 321, 338
AsuHPI GGTGA 1 cut(s) 572
BbvI GCAGC 2 cut(s) 225, 414
BceAI ACGGC 1 cut(s) 388
BcgI CGANNNNNNTGC 2 cut(s) 617, 651
BciT130I CCWGG 2 cut(s) 386, 592
BciVI GTATCC 2 cut(s) 360, 1216
BcoDI GTCTC 2 cut(s) 165, 923
BfaI CTAG 4 cut(s) 168, 246, 563, 813
BfmI CTRYAG 2 cut(s) 87, 470
BfuAI ACCTGC 1 cut(s) 496
BfuI GTATCC 2 cut(s) 360, 1216
BglII AGATCT 2 cut(s) 559, 1092
BisI GCNGC 4 cut(s) 100, 239, 428, 543
BlsI GCNGC 4 cut(s) 101, 240, 429, 544
Bme1390I CCNGG 2 cut(s) 386, 592
BmgBI CACGTC 1 cut(s) 449
BmiI GGNNCC 1 cut(s) 37
BmrFI CCNGG 2 cut(s) 386, 592
BmsI GCATC 3 cut(s) 73, 190, 384
Bpu10I CCTNAGC 1 cut(s) 1197
BpuEI CTTGAG 1 cut(s) 1172
Bsa29I ATCGAT 1 cut(s) 198
BsaBI GATNNNNATC 1 cut(s) 348
BsaI GGTCTC 1 cut(s) 923
BsaJI CCNNGG 3 cut(s) 543, 844, 1149
BsaWI WCCGGW 1 cut(s) 862
Bsc4I CCNNNNNNNGG 1 cut(s) 475
Bse1I ACTGG 3 cut(s) 152, 294, 519
Bse3DI GCAATG 1 cut(s) 838
Bse8I GATNNNNATC 1 cut(s) 348
BseAI TCCGGA 1 cut(s) 862
BseBI CCWGG 2 cut(s) 386, 592
BseCI ATCGAT 1 cut(s) 198
BseDI CCNNGG 3 cut(s) 543, 844, 1149
BseGI GGATG 3 cut(s) 418, 796, 840
BseJI GATNNNNATC 1 cut(s) 348
BseLI CCNNNNNNNGG 1 cut(s) 475
BseMI GCAATG 1 cut(s) 838
BseMII CTCAG 4 cut(s) 223, 381, 515, 934
BseNI ACTGG 3 cut(s) 152, 294, 519
BseRI GAGGAG 1 cut(s) 348
BseXI GCAGC 2 cut(s) 225, 414
Bsh1236I CGCG 4 cut(s) 545, 569, 620, 934
BshFI GGCC 1 cut(s) 1105
BshVI ATCGAT 1 cut(s) 198
BsiSI CCGG 1 cut(s) 863
BslFI GGGAC 1 cut(s) 140
BslI CCNNNNNNNGG 1 cut(s) 475
BsmAI GTCTC 2 cut(s) 165, 923
BsmFI GGGAC 1 cut(s) 140
BsmI GAATGC 2 cut(s) 430, 972
BsnI GGCC 1 cut(s) 1105
Bso31I GGTCTC 1 cut(s) 923
Bsp13I TCCGGA 1 cut(s) 862
Bsp19I CCATGG 1 cut(s) 844
BspACI CCGC 5 cut(s) 100, 269, 543, 545, 569
BspANI GGCC 1 cut(s) 1105
BspCNI CTCAG 4 cut(s) 222, 382, 514, 933
BspDI ATCGAT 1 cut(s) 198
BspEI TCCGGA 1 cut(s) 862
BspFNI CGCG 4 cut(s) 545, 569, 620, 934
BspLI GGNNCC 1 cut(s) 37
BspMI ACCTGC 1 cut(s) 496
BspPI GGATC 4 cut(s) 100, 555, 854, 1223
BspTNI GGTCTC 1 cut(s) 923
BsrDI GCAATG 1 cut(s) 838
BsrI ACTGG 3 cut(s) 152, 294, 519
BssECI CCNNGG 3 cut(s) 543, 844, 1149
BssNAI GTATAC 1 cut(s) 810
BssT1I CCWWGG 2 cut(s) 844, 1149
Bst1107I GTATAC 1 cut(s) 810
Bst2UI CCWGG 2 cut(s) 386, 592
Bst4CI ACNGT 4 cut(s) 474, 491, 766, 893
Bst6I CTCTTC 1 cut(s) 1094
BstC8I GCNNGC 4 cut(s) 243, 368, 425, 1156
BstDEI CTNAG 6 cut(s) 189, 209, 390, 501, 920, 1197
BstDSI CCRYGG 2 cut(s) 543, 844
BstF5I GGATG 3 cut(s) 418, 796, 840
BstFNI CGCG 4 cut(s) 545, 569, 620, 934
BstMAI GTCTC 2 cut(s) 165, 923
BstMWI GCNNNNNNNGC 2 cut(s) 372, 386
BstNI CCWGG 2 cut(s) 386, 592
BstNSI RCATGY 2 cut(s) 116, 370
BstSCI CCNGG 2 cut(s) 384, 590
BstSFI CTRYAG 2 cut(s) 87, 470
BstUI CGCG 4 cut(s) 545, 569, 620, 934
BstV1I GCAGC 2 cut(s) 225, 414
BstX2I RGATCY 4 cut(s) 105, 547, 559, 1092
BstYI RGATCY 4 cut(s) 105, 547, 559, 1092
BstZ17I GTATAC 1 cut(s) 810
Bsu15I ATCGAT 1 cut(s) 198
BsuI GTATCC 2 cut(s) 360, 1216
BsuRI GGCC 1 cut(s) 1105
BsuTUI ATCGAT 1 cut(s) 198
BtgI CCRYGG 2 cut(s) 543, 844
BtrI CACGTC 1 cut(s) 449
BtsCI GGATG 3 cut(s) 418, 796, 840
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 2 cut(s) 375, 526
BveI ACCTGC 1 cut(s) 496
Cac8I GCNNGC 4 cut(s) 243, 368, 425, 1156
CaiI CAGNNNCTG 1 cut(s) 216
Cfr42I CCGCGG 1 cut(s) 546
ClaI ATCGAT 1 cut(s) 198
CseI GACGC 2 cut(s) 754, 949
DdeI CTNAG 6 cut(s) 189, 209, 390, 501, 920, 1197
Eam1104I CTCTTC 1 cut(s) 1094
EarI CTCTTC 1 cut(s) 1094
Eco130I CCWWGG 2 cut(s) 844, 1149
Eco31I GGTCTC 1 cut(s) 923
Eco57I CTGAAG 1 cut(s) 969
EcoRII CCWGG 2 cut(s) 384, 590
EcoT14I CCWWGG 2 cut(s) 844, 1149
ErhI CCWWGG 2 cut(s) 844, 1149
FaqI GGGAC 1 cut(s) 140
FblI GTMKAC 2 cut(s) 809, 888
Fnu4HI GCNGC 4 cut(s) 100, 239, 428, 543
FokI GGATG 3 cut(s) 425, 803, 827
Fsp4HI GCNGC 4 cut(s) 100, 239, 428, 543
FspBI CTAG 4 cut(s) 168, 246, 563, 813
GluI GCNGC 4 cut(s) 100, 239, 428, 543
HaeIII GGCC 1 cut(s) 1105
HapII CCGG 1 cut(s) 863
HgaI GACGC 2 cut(s) 754, 949
HinfI GANTC 5 cut(s) 308, 587, 724, 849, 1176
HpaII CCGG 1 cut(s) 863
HphI GGTGA 1 cut(s) 572
Hpy166II GTNNAC 3 cut(s) 498, 810, 889
Hpy8I GTNNAC 3 cut(s) 498, 810, 889
Hpy99I CGWCG 1 cut(s) 450
HpyAV CCTTC 4 cut(s) 131, 908, 1007, 1061
HpyCH4III ACNGT 4 cut(s) 474, 491, 766, 893
HpyCH4IV ACGT 2 cut(s) 418, 448
HpyF10VI GCNNNNNNNGC 2 cut(s) 372, 386
HpyF3I CTNAG 6 cut(s) 189, 209, 390, 501, 920, 1197
HpySE526I ACGT 2 cut(s) 418, 448
Kpn2I TCCGGA 1 cut(s) 862
KspI CCGCGG 1 cut(s) 546
Lsp1109I GCAGC 2 cut(s) 225, 414
LweI GCATC 3 cut(s) 73, 190, 384
MaeI CTAG 4 cut(s) 168, 246, 563, 813
MaeII ACGT 2 cut(s) 418, 448
MaeIII GTNAC 6 cut(s) 212, 449, 461, 631, 693, 926
MboII GAAGA 3 cut(s) 205, 1000, 1111
MfeI CAATTG 1 cut(s) 975
MflI RGATCY 4 cut(s) 105, 547, 559, 1092
MluCI AATT 7 cut(s) 121, 147, 232, 321, 338, 879, 975
MlyI GAGTC 1 cut(s) 858
MmeI TCCRAC 3 cut(s) 133, 456, 469
MroI TCCGGA 1 cut(s) 862
MseI TTAA 2 cut(s) 231, 647
MslI CAYNNNNRTG 3 cut(s) 281, 582, 1064
MspA1I CMGCKG 1 cut(s) 545
MspI CCGG 1 cut(s) 863
MspR9I CCNGG 2 cut(s) 386, 592
MunI CAATTG 1 cut(s) 975
Mva1269I GAATGC 2 cut(s) 430, 972
MvaI CCWGG 2 cut(s) 386, 592
MvnI CGCG 4 cut(s) 545, 569, 620, 934
MwoI GCNNNNNNNGC 2 cut(s) 372, 386
NcoI CCATGG 1 cut(s) 844
NlaIV GGNNCC 1 cut(s) 37
NmuCI GTSAC 2 cut(s) 449, 693
NspI RCATGY 2 cut(s) 116, 370
PaeI GCATGC 1 cut(s) 370
PaqCI CACCTGC 1 cut(s) 496
PciI ACATGT 1 cut(s) 112
PctI GAATGC 2 cut(s) 430, 972
PfeI GAWTC 4 cut(s) 308, 587, 724, 1176
PkrI GCNGC 4 cut(s) 101, 240, 429, 544
PleI GAGTC 1 cut(s) 857
PpsI GAGTC 1 cut(s) 857
PscI ACATGT 1 cut(s) 112
PsiI TTATAA 1 cut(s) 705
Psp6I CCWGG 2 cut(s) 384, 590
PspGI CCWGG 2 cut(s) 384, 590
PspN4I GGNNCC 1 cut(s) 37
PstNI CAGNNNCTG 1 cut(s) 216
PsuI RGATCY 4 cut(s) 105, 547, 559, 1092
RseI CAYNNNNRTG 3 cut(s) 281, 582, 1064
SacII CCGCGG 1 cut(s) 546
SaqAI TTAA 2 cut(s) 231, 647
SatI GCNGC 4 cut(s) 100, 239, 428, 543
SchI GAGTC 1 cut(s) 858
ScrFI CCNGG 2 cut(s) 386, 592
SfaNI GCATC 3 cut(s) 73, 190, 384
SfcI CTRYAG 2 cut(s) 87, 470
Sfr303I CCGCGG 1 cut(s) 546
SgrBI CCGCGG 1 cut(s) 546
SmiMI CAYNNNNRTG 3 cut(s) 281, 582, 1064
SmlI CTYRAG 1 cut(s) 1187
SmoI CTYRAG 1 cut(s) 1187
SphI GCATGC 1 cut(s) 370
Sse9I AATT 7 cut(s) 121, 147, 232, 321, 338, 879, 975
SsiI CCGC 5 cut(s) 100, 269, 543, 545, 569
SspMI CTAG 4 cut(s) 168, 246, 563, 813
StyD4I CCNGG 2 cut(s) 384, 590
StyI CCWWGG 2 cut(s) 844, 1149
TaaI ACNGT 4 cut(s) 474, 491, 766, 893
TaiI ACGT 2 cut(s) 421, 451
TaqI TCGA 3 cut(s) 198, 662, 1037
TasI AATT 7 cut(s) 121, 147, 232, 321, 338, 879, 975
TauI GCSGC 2 cut(s) 102, 545
TfiI GAWTC 4 cut(s) 308, 587, 724, 1176
Tru1I TTAA 2 cut(s) 231, 647
Tru9I TTAA 2 cut(s) 231, 647
TscAI CASTG 2 cut(s) 382, 526
TseFI GTSAC 2 cut(s) 449, 693
TseI GCWGC 2 cut(s) 238, 427
Tsp45I GTSAC 2 cut(s) 449, 693
TspDTI ATGAA 6 cut(s) 243, 271, 429, 662, 674, 829
TspGWI ACGGA 1 cut(s) 803
TspRI CASTG 2 cut(s) 382, 526
XapI RAATTY 3 cut(s) 147, 321, 338
XceI RCATGY 2 cut(s) 116, 370
XcmI CCANNNNNNNNNTGG 1 cut(s) 61
XmiI GTMKAC 2 cut(s) 809, 888
XspI CTAG 4 cut(s) 168, 246, 563, 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.