Rh7AG470500

mitochondrial fission

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0009680
Physical Location & Seq
Forward (+)
65121505 .. 65122676
1172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG470500.1

Sequence Viewer

Length: 822 bp
ATGAGAGAACCAAACCAAGATGCAGTAGTTTCCGGCCGCAAAATTGGACCAATCATCGATGTTTGCAAGGAGGAAGGAATTAAAATTCCAGTCCCAACCAGAACTAGGGACTTCCCAGAGATTAGTAAGAAGATCAATGATAAGCTTACATATAGCCTGTTGGAACTTCATTTGCTGCCTATTCGTATTTCAACTGTTGACGAGGCCTTCGCCACTTTCATGCAAATTATGACGCTGACCAAAGAAACGCTCAGAAAAATTCTTGTGAGAGGAGAATTTGATGAGTTCCTAGATGATGAGATGCATGGCACTGGAAAGCTGGCTGAGATGCTCAAGCAGTTCTCGGATGAGCTTGACCAATTTCATCACGAGTATGGTCTTCGTGACCTCAAAAATAACTTCTTAGAGACCAAGATCAACTATATCCTTAATACTCGGGATGCTGTCAAACAAGATCATGTAGATGATGCAGGGAAGAACAAAGAGGAGCAATGCAGCCTTATGAACACGAGGGAATTCATATATGGAGTTCTTGATGATATGAAAAAACCCTCCACAATAGTTGTGGAGGGCATTGGGGAGATTGAAGTACTTGAGGGTCTGAGGAAGTACTCACGAGATTTAAGTGTTGCAAACCTTGTGGACACATACATGGATGTGGAGATGTCTGATATGCAGATGTTGAAGGGGCCAGAATATGGTTTCGGATTAAAGGAGATGCTGGAGAAATATCCTTTGGCGCGCAAGGATCTTCAAAAAAGAATCGAAATGCTCAAGAAAGCCAAGGACATTTGTGATGGCATCCATCATGGGTGCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ Dynamin_N

Protein Analysis

273

Amino Acids

31.51

Weight (kDa)

5.32

Isoelectric Point (pI)

25.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_M PF01031 38 - 142 4.3e-06 Dynamin central region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 698
AccII CGCG 1 cut(s) 742
AciI CCGC 1 cut(s) 37
AclWI GGATC 1 cut(s) 756
AcoI YGGCCR 1 cut(s) 34
AcsI RAATTY 4 cut(s) 84, 258, 275, 515
AfaI GTAC 2 cut(s) 591, 611
AfiI CCNNNNNNNGG 2 cut(s) 105, 698
AgsI TTSAA 4 cut(s) 192, 587, 685, 755
AjuI GAANNNNNNNTTGG 2 cut(s) 719, 751
AluBI AGCT 3 cut(s) 145, 319, 352
AluI AGCT 3 cut(s) 145, 319, 352
Alw26I GTCTC 1 cut(s) 401
AlwI GGATC 1 cut(s) 756
Ama87I CYCGRG 1 cut(s) 435
AoxI GGCC 3 cut(s) 34, 204, 689
ApeKI GCWGC 2 cut(s) 175, 495
ApoI RAATTY 4 cut(s) 84, 258, 275, 515
ArsI GACNNNNNNTTYG 2 cut(s) 191, 223
AspLEI GCGC 2 cut(s) 742, 744
AspS9I GGNCC 2 cut(s) 47, 689
AvaI CYCGRG 1 cut(s) 435
AvaII GGWCC 1 cut(s) 47
BauI CACGAG 3 cut(s) 368, 508, 615
BbsI GAAGAC 1 cut(s) 371
BbvI GCAGC 2 cut(s) 162, 507
BccI CCATC 2 cut(s) 791, 813
BcoDI GTCTC 1 cut(s) 401
BfaI CTAG 2 cut(s) 105, 290
BisI GCNGC 3 cut(s) 37, 176, 496
BlsI GCNGC 3 cut(s) 38, 177, 497
BmcAI AGTACT 2 cut(s) 591, 611
Bme18I GGWCC 1 cut(s) 47
BmeT110I CYCGRG 1 cut(s) 435
BmgT120I GGNCC 2 cut(s) 47, 689
BmiI GGNNCC 1 cut(s) 690
BmsI GCATC 7 cut(s) 10, 291, 318, 430, 457, 708, 810
BpiI GAAGAC 1 cut(s) 371
BpmI CTGGAG 1 cut(s) 743
BpuEI CTTGAG 3 cut(s) 317, 614, 758
Bsa29I ATCGAT 1 cut(s) 57
BsaI GGTCTC 1 cut(s) 401
BsaJI CCNNGG 1 cut(s) 783
Bsc4I CCNNNNNNNGG 2 cut(s) 105, 698
Bse1I ACTGG 2 cut(s) 89, 316
Bse3DI GCAATG 1 cut(s) 497
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 1 cut(s) 783
BseGI GGATG 4 cut(s) 352, 445, 661, 801
BseLI CCNNNNNNNGG 2 cut(s) 105, 698
BseMI GCAATG 1 cut(s) 497
BseMII CTCAG 3 cut(s) 265, 315, 593
BseNI ACTGG 2 cut(s) 89, 316
BsePI GCGCGC 1 cut(s) 740
BseRI GAGGAG 2 cut(s) 285, 500
BseX3I CGGCCG 1 cut(s) 34
BseXI GCAGC 2 cut(s) 162, 507
Bsh1236I CGCG 1 cut(s) 742
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 3 cut(s) 36, 206, 691
BshVI ATCGAT 1 cut(s) 57
BsiEI CGRYCG 1 cut(s) 37
BsiHKCI CYCGRG 1 cut(s) 435
BsiSI CCGG 1 cut(s) 33
BslFI GGGAC 2 cut(s) 77, 122
BslI CCNNNNNNNGG 2 cut(s) 105, 698
BsmAI GTCTC 1 cut(s) 401
BsmFI GGGAC 2 cut(s) 77, 122
BsnI GGCC 3 cut(s) 36, 206, 691
Bso31I GGTCTC 1 cut(s) 401
BsoBI CYCGRG 1 cut(s) 435
Bsp143I GATC 4 cut(s) 132, 414, 454, 748
BspACI CCGC 1 cut(s) 37
BspANI GGCC 3 cut(s) 36, 206, 691
BspCNI CTCAG 3 cut(s) 264, 316, 594
BspDI ATCGAT 1 cut(s) 57
BspFNI CGCG 1 cut(s) 742
BspLI GGNNCC 1 cut(s) 690
BspPI GGATC 1 cut(s) 756
BspTNI GGTCTC 1 cut(s) 401
BsrDI GCAATG 1 cut(s) 497
BsrI ACTGG 2 cut(s) 89, 316
BssECI CCNNGG 1 cut(s) 783
BssHII GCGCGC 1 cut(s) 740
BssMI GATC 4 cut(s) 132, 414, 454, 748
BssSI CACGAG 3 cut(s) 368, 508, 615
BssT1I CCWWGG 1 cut(s) 783
Bst2BI CACGAG 3 cut(s) 368, 508, 615
Bst4CI ACNGT 1 cut(s) 196
BstC8I GCNNGC 2 cut(s) 321, 742
BstDEI CTNAG 4 cut(s) 251, 324, 403, 602
BstF5I GGATG 4 cut(s) 352, 445, 661, 801
BstFNI CGCG 1 cut(s) 742
BstHHI GCGC 2 cut(s) 742, 744
BstKTI GATC 4 cut(s) 135, 417, 457, 751
BstMAI GTCTC 1 cut(s) 401
BstMBI GATC 4 cut(s) 132, 414, 454, 748
BstMCI CGRYCG 1 cut(s) 37
BstUI CGCG 1 cut(s) 742
BstV1I GCAGC 2 cut(s) 162, 507
BstV2I GAAGAC 1 cut(s) 371
BstX2I RGATCY 1 cut(s) 748
BstYI RGATCY 1 cut(s) 748
BstZI CGGCCG 1 cut(s) 34
Bsu15I ATCGAT 1 cut(s) 57
BsuRI GGCC 3 cut(s) 36, 206, 691
BsuTUI ATCGAT 1 cut(s) 57
BtsCI GGATG 4 cut(s) 352, 445, 661, 801
BtsIMutI CAGTG 1 cut(s) 309
Cac8I GCNNGC 2 cut(s) 321, 742
CfoI GCGC 2 cut(s) 742, 744
Cfr13I GGNCC 2 cut(s) 47, 689
ClaI ATCGAT 1 cut(s) 57
CseI GACGC 1 cut(s) 241
Csp6I GTAC 2 cut(s) 590, 610
CspCI CAANNNNNGTGG 6 cut(s) 544, 546, 579, 581, 621, 656
CviAII CATG 5 cut(s) 220, 305, 458, 652, 809
CviQI GTAC 2 cut(s) 590, 610
DdeI CTNAG 4 cut(s) 251, 324, 403, 602
DpnI GATC 4 cut(s) 134, 416, 456, 750
DpnII GATC 4 cut(s) 132, 414, 454, 748
EaeI YGGCCR 1 cut(s) 34
EagI CGGCCG 1 cut(s) 34
EclXI CGGCCG 1 cut(s) 34
Eco130I CCWWGG 1 cut(s) 783
Eco147I AGGCCT 1 cut(s) 206
Eco31I GGTCTC 1 cut(s) 401
Eco47I GGWCC 1 cut(s) 47
Eco52I CGGCCG 1 cut(s) 34
Eco88I CYCGRG 1 cut(s) 435
EcoRI GAATTC 1 cut(s) 515
EcoT14I CCWWGG 1 cut(s) 783
EcoT22I ATGCAT 1 cut(s) 306
ErhI CCWWGG 1 cut(s) 783
FaeI CATG 5 cut(s) 223, 308, 461, 655, 812
FaqI GGGAC 2 cut(s) 77, 122
FatI CATG 5 cut(s) 219, 304, 457, 651, 808
Fnu4HI GCNGC 3 cut(s) 37, 176, 496
FokI GGATG 4 cut(s) 359, 452, 668, 788
Fsp4HI GCNGC 3 cut(s) 37, 176, 496
FspBI CTAG 2 cut(s) 105, 290
GlaI GCGC 2 cut(s) 741, 743
GluI GCNGC 3 cut(s) 37, 176, 496
GsuI CTGGAG 1 cut(s) 743
HaeIII GGCC 3 cut(s) 36, 206, 691
HapII CCGG 1 cut(s) 33
HgaI GACGC 1 cut(s) 241
HhaI GCGC 2 cut(s) 742, 744
Hin1II CATG 5 cut(s) 223, 308, 461, 655, 812
Hin6I GCGC 2 cut(s) 740, 742
HinP1I GCGC 2 cut(s) 740, 742
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HindIII AAGCTT 1 cut(s) 143
HinfI GANTC 1 cut(s) 762
HpaII CCGG 1 cut(s) 33
Hpy166II GTNNAC 2 cut(s) 199, 643
Hpy188I TCNGA 5 cut(s) 254, 346, 603, 670, 707
Hpy188III TCNNGA 6 cut(s) 368, 383, 437, 533, 615, 775
Hpy8I GTNNAC 2 cut(s) 199, 643
HpyAV CCTTC 3 cut(s) 68, 217, 679
HpyCH4III ACNGT 1 cut(s) 196
HpyCH4V TGCA 8 cut(s) 23, 66, 223, 304, 470, 495, 632, 676
HpyF3I CTNAG 4 cut(s) 251, 324, 403, 602
Hsp92II CATG 5 cut(s) 223, 308, 461, 655, 812
HspAI GCGC 2 cut(s) 740, 742
Kzo9I GATC 4 cut(s) 132, 414, 454, 748
LmnI GCTCC 1 cut(s) 487
Lsp1109I GCAGC 2 cut(s) 162, 507
LweI GCATC 7 cut(s) 10, 291, 318, 430, 457, 708, 810
MaeI CTAG 2 cut(s) 105, 290
MaeIII GTNAC 1 cut(s) 383
MalI GATC 4 cut(s) 134, 416, 456, 750
MboI GATC 4 cut(s) 132, 414, 454, 748
MboII GAAGA 4 cut(s) 142, 371, 487, 743
MflI RGATCY 1 cut(s) 748
MluCI AATT 8 cut(s) 42, 78, 84, 225, 258, 275, 359, 515
MmeI TCCRAC 1 cut(s) 141
Mph1103I ATGCAT 1 cut(s) 306
MseI TTAA 5 cut(s) 81, 429, 623, 710, 820
MslI CAYNNNNRTG 5 cut(s) 218, 372, 462, 650, 656
MspI CCGG 1 cut(s) 33
MvnI CGCG 1 cut(s) 742
NdeII GATC 4 cut(s) 132, 414, 454, 748
NlaIII CATG 5 cut(s) 223, 308, 461, 655, 812
NlaIV GGNNCC 1 cut(s) 690
NmuCI GTSAC 1 cut(s) 383
NsiI ATGCAT 1 cut(s) 306
PauI GCGCGC 1 cut(s) 740
PceI AGGCCT 1 cut(s) 206
PfeI GAWTC 1 cut(s) 762
PflMI CCANNNNNTGG 1 cut(s) 698
PkrI GCNGC 3 cut(s) 38, 177, 497
PspN4I GGNNCC 1 cut(s) 690
PspPI GGNCC 2 cut(s) 47, 689
PsuI RGATCY 1 cut(s) 748
PteI GCGCGC 1 cut(s) 740
RsaI GTAC 2 cut(s) 591, 611
RsaNI GTAC 2 cut(s) 590, 610
RseI CAYNNNNRTG 5 cut(s) 218, 372, 462, 650, 656
SaqAI TTAA 5 cut(s) 81, 429, 623, 710, 820
SatI GCNGC 3 cut(s) 37, 176, 496
Sau3AI GATC 4 cut(s) 132, 414, 454, 748
Sau96I GGNCC 2 cut(s) 47, 689
ScaI AGTACT 2 cut(s) 591, 611
SetI ASST 5 cut(s) 147, 321, 354, 390, 639
SfaNI GCATC 7 cut(s) 10, 291, 318, 430, 457, 708, 810
SinI GGWCC 1 cut(s) 47
SmiMI CAYNNNNRTG 5 cut(s) 218, 372, 462, 650, 656
SmlI CTYRAG 3 cut(s) 332, 593, 773
SmoI CTYRAG 3 cut(s) 332, 593, 773
Sse9I AATT 8 cut(s) 42, 78, 84, 225, 258, 275, 359, 515
SseBI AGGCCT 1 cut(s) 206
SsiI CCGC 1 cut(s) 37
SspMI CTAG 2 cut(s) 105, 290
StuI AGGCCT 1 cut(s) 206
StyI CCWWGG 1 cut(s) 783
TaaI ACNGT 1 cut(s) 196
TaqI TCGA 2 cut(s) 57, 765
TasI AATT 8 cut(s) 42, 78, 84, 225, 258, 275, 359, 515
TatI WGTACW 2 cut(s) 589, 609
TauI GCSGC 1 cut(s) 39
TfiI GAWTC 1 cut(s) 762
Tru1I TTAA 5 cut(s) 81, 429, 623, 710, 820
Tru9I TTAA 5 cut(s) 81, 429, 623, 710, 820
TscAI CASTG 1 cut(s) 316
TseFI GTSAC 1 cut(s) 383
TseI GCWGC 2 cut(s) 175, 495
Tsp45I GTSAC 1 cut(s) 383
TspDTI ATGAA 6 cut(s) 158, 208, 353, 508, 518, 557
TspRI CASTG 1 cut(s) 316
Van91I CCANNNNNTGG 1 cut(s) 698
VpaK11BI GGWCC 1 cut(s) 47
XapI RAATTY 4 cut(s) 84, 258, 275, 515
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XspI CTAG 2 cut(s) 105, 290
ZrmI AGTACT 2 cut(s) 591, 611
Zsp2I ATGCAT 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.