vesicle-mediated transport
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43235 |
| fragaria_vesca | FvH4_4g11340 FvH4_4g11340 FvH4_4g11340 FvH4_4g11340 FvH4_4g11340 FvH4_4g11340 FvH4_4g11340 |
| malus_domestica | MD04G1038000.v1.1 |
| prunus_persica | Prupe.1G187900_v2.0.a1 Prupe.1G187900_v2.0.a1 |
| pyrus_communis | pycom04g03090 |
| rosa_chinensis | RchiOBHm_Chr4g0407651 |
| rosa_laevigata | RLG00000002116 RLG00000008704 |
| rosa_multiflora | Rmu_sc0001743.1_g000005 Rmu_sc0001900.1_g000058 Rmu_sc0006439.1_g000002 Rmu_sc0011989.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00352250 |
| rosa_rugosa | Rorug02G0207700 Rorug04G0081100 |
| rosa_samantha | Rh4AG145700 Rh4BG143400 Rh4BG241800 Rh4CG152300 Rh4DG139900 |
| rosa_wichuraiana | Rw4G011830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 110 |
| AccBSI | CCGCTC | 1 cut(s) | 117 |
| AciI | CCGC | 1 cut(s) | 117 |
| AcoI | YGGCCR | 1 cut(s) | 356 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 104, 105, 110, 271, 354 |
| AflIII | ACRYGT | 1 cut(s) | 46 |
| AgsI | TTSAA | 2 cut(s) | 35, 65 |
| AjnI | CCWGG | 1 cut(s) | 103 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 227, 259, 352, 384 |
| AluBI | AGCT | 4 cut(s) | 16, 39, 285, 343 |
| AluI | AGCT | 4 cut(s) | 16, 39, 285, 343 |
| Alw21I | GWGCWC | 1 cut(s) | 287 |
| AoxI | GGCC | 1 cut(s) | 356 |
| AsuHPI | GGTGA | 3 cut(s) | 157, 254, 286 |
| BalI | TGGCCA | 1 cut(s) | 358 |
| BanII | GRGCYC | 1 cut(s) | 287 |
| Bbv12I | GWGCWC | 1 cut(s) | 287 |
| BccI | CCATC | 1 cut(s) | 295 |
| BciT130I | CCWGG | 1 cut(s) | 105 |
| Bme1390I | CCNGG | 1 cut(s) | 105 |
| BmrFI | CCNGG | 1 cut(s) | 105 |
| Bpu10I | CCTNAGC | 1 cut(s) | 12 |
| BsaJI | CCNNGG | 1 cut(s) | 104 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 296, 326 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 104, 105, 110, 271, 354 |
| BseBI | CCWGG | 1 cut(s) | 105 |
| BseDI | CCNNGG | 1 cut(s) | 104 |
| BseGI | GGATG | 1 cut(s) | 306 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 104, 105, 110, 271, 354 |
| BseRI | GAGGAG | 5 cut(s) | 166, 230, 405, 410, 413 |
| BseYI | CCCAGC | 1 cut(s) | 296 |
| BshFI | GGCC | 1 cut(s) | 358 |
| BsiHKAI | GWGCWC | 1 cut(s) | 287 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 104, 105, 110, 271, 354 |
| BsnI | GGCC | 1 cut(s) | 358 |
| Bsp1286I | GDGCHC | 1 cut(s) | 287 |
| BspACI | CCGC | 1 cut(s) | 117 |
| BspANI | GGCC | 1 cut(s) | 358 |
| BspQI | GCTCTTC | 1 cut(s) | 275 |
| BsrBI | CCGCTC | 1 cut(s) | 117 |
| BssECI | CCNNGG | 1 cut(s) | 104 |
| Bst2UI | CCWGG | 1 cut(s) | 105 |
| Bst6I | CTCTTC | 2 cut(s) | 275, 382 |
| BstDEI | CTNAG | 1 cut(s) | 12 |
| BstF5I | GGATG | 1 cut(s) | 306 |
| BstNI | CCWGG | 1 cut(s) | 105 |
| BstNSI | RCATGY | 1 cut(s) | 50 |
| BstSCI | CCNGG | 1 cut(s) | 103 |
| BsuRI | GGCC | 1 cut(s) | 358 |
| BtsCI | GGATG | 1 cut(s) | 306 |
| CviAII | CATG | 1 cut(s) | 47 |
| CviJI | RGCY | 7 cut(s) | 16, 39, 205, 285, 296, 343, 358 |
| CviKI_1 | RGCY | 7 cut(s) | 16, 39, 205, 285, 296, 343, 358 |
| DdeI | CTNAG | 1 cut(s) | 12 |
| EaeI | YGGCCR | 1 cut(s) | 356 |
| Eam1104I | CTCTTC | 2 cut(s) | 275, 382 |
| EarI | CTCTTC | 2 cut(s) | 275, 382 |
| Ecl136II | GAGCTC | 1 cut(s) | 285 |
| Eco24I | GRGCYC | 1 cut(s) | 287 |
| Eco53kI | GAGCTC | 1 cut(s) | 285 |
| EcoICRI | GAGCTC | 1 cut(s) | 285 |
| EcoRII | CCWGG | 1 cut(s) | 103 |
| EcoT38I | GRGCYC | 1 cut(s) | 287 |
| FaeI | CATG | 1 cut(s) | 50 |
| FaiI | YATR | 2 cut(s) | 42, 48 |
| FatI | CATG | 1 cut(s) | 46 |
| FauI | CCCGC | 1 cut(s) | 110 |
| FokI | GGATG | 1 cut(s) | 313 |
| FriOI | GRGCYC | 1 cut(s) | 287 |
| GsaI | CCCAGC | 1 cut(s) | 300 |
| HaeIII | GGCC | 1 cut(s) | 358 |
| Hin1II | CATG | 1 cut(s) | 50 |
| HindIII | AAGCTT | 2 cut(s) | 14, 341 |
| HinfI | GANTC | 5 cut(s) | 61, 74, 163, 225, 319 |
| HphI | GGTGA | 3 cut(s) | 157, 254, 286 |
| Hpy188I | TCNGA | 2 cut(s) | 24, 81 |
| Hpy188III | TCNNGA | 3 cut(s) | 52, 65, 229 |
| Hpy99I | CGWCG | 1 cut(s) | 274 |
| HpyAV | CCTTC | 1 cut(s) | 126 |
| HpyF3I | CTNAG | 1 cut(s) | 12 |
| Hsp92II | CATG | 1 cut(s) | 50 |
| LguI | GCTCTTC | 1 cut(s) | 275 |
| LmnI | GCTCC | 1 cut(s) | 114 |
| LpnPI | CCDG | 5 cut(s) | 65, 90, 117, 223, 282 |
| MaeIII | GTNAC | 2 cut(s) | 125, 145 |
| MbiI | CCGCTC | 1 cut(s) | 117 |
| MboII | GAAGA | 6 cut(s) | 67, 244, 292, 393, 396, 399 |
| MhlI | GDGCHC | 1 cut(s) | 287 |
| MlsI | TGGCCA | 1 cut(s) | 358 |
| MluNI | TGGCCA | 1 cut(s) | 358 |
| MlyI | GAGTC | 2 cut(s) | 172, 234 |
| Mox20I | TGGCCA | 1 cut(s) | 358 |
| MscI | TGGCCA | 1 cut(s) | 358 |
| MseI | TTAA | 2 cut(s) | 18, 315 |
| Msp20I | TGGCCA | 1 cut(s) | 358 |
| MspR9I | CCNGG | 1 cut(s) | 105 |
| MvaI | CCWGG | 1 cut(s) | 105 |
| NlaIII | CATG | 1 cut(s) | 50 |
| NmuCI | GTSAC | 1 cut(s) | 145 |
| NspI | RCATGY | 1 cut(s) | 50 |
| PciI | ACATGT | 1 cut(s) | 46 |
| PciSI | GCTCTTC | 1 cut(s) | 275 |
| PfeI | GAWTC | 3 cut(s) | 61, 74, 319 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 110 |
| PleI | GAGTC | 2 cut(s) | 171, 233 |
| PpsI | GAGTC | 2 cut(s) | 171, 233 |
| PscI | ACATGT | 1 cut(s) | 46 |
| Psp124BI | GAGCTC | 1 cut(s) | 287 |
| Psp6I | CCWGG | 1 cut(s) | 103 |
| PspFI | CCCAGC | 1 cut(s) | 296 |
| PspGI | CCWGG | 1 cut(s) | 103 |
| SacI | GAGCTC | 1 cut(s) | 287 |
| SapI | GCTCTTC | 1 cut(s) | 275 |
| SaqAI | TTAA | 2 cut(s) | 18, 315 |
| SchI | GAGTC | 2 cut(s) | 172, 234 |
| ScrFI | CCNGG | 1 cut(s) | 105 |
| SduI | GDGCHC | 1 cut(s) | 287 |
| SetI | ASST | 9 cut(s) | 18, 41, 144, 183, 222, 267, 287, 345, 409 |
| SsiI | CCGC | 1 cut(s) | 117 |
| SstI | GAGCTC | 1 cut(s) | 287 |
| StyD4I | CCNGG | 1 cut(s) | 103 |
| TaqI | TCGA | 1 cut(s) | 322 |
| TfiI | GAWTC | 3 cut(s) | 61, 74, 319 |
| Tru1I | TTAA | 2 cut(s) | 18, 315 |
| Tru9I | TTAA | 2 cut(s) | 18, 315 |
| TseFI | GTSAC | 1 cut(s) | 145 |
| Tsp45I | GTSAC | 1 cut(s) | 145 |
| TspDTI | ATGAA | 1 cut(s) | 57 |
| TspGWI | ACGGA | 1 cut(s) | 144 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 110 |
| XceI | RCATGY | 1 cut(s) | 50 |