Rh5CG567500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
80329256 .. 80329420
165 bp
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UTR
Exon/CDS
Intron
Rh5CG567500.1

Sequence Viewer

Length: 165 bp
ATGGCTACTTCTCCTTCCTGCAAGCTCGAAGAGGTCAACATCGAGTGCGACGAGAAGGGCGAAGAGGTAAAAGGCAAAGATTGCGGGAGGATAGCGGAGGAGAGGGAGGCGGTGGTGGCCGTGCTCCACGGCGCGTCGATTATGCTCCGGTTGCCAACCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

5.86

Weight (kDa)

4.81

Isoelectric Point (pI)

68.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 134
AciI CCGC 3 cut(s) 84, 95, 110
AcoI YGGCCR 1 cut(s) 117
AluBI AGCT 1 cut(s) 25
AluI AGCT 1 cut(s) 25
Alw21I GWGCWC 1 cut(s) 126
AoxI GGCC 1 cut(s) 117
AspLEI GCGC 1 cut(s) 134
Bbv12I GWGCWC 1 cut(s) 126
BceAI ACGGC 2 cut(s) 104, 145
BsaJI CCNNGG 1 cut(s) 127
BsaWI WCCGGW 1 cut(s) 147
BseDI CCNNGG 1 cut(s) 127
BseRI GAGGAG 1 cut(s) 113
Bsh1236I CGCG 1 cut(s) 134
BshFI GGCC 1 cut(s) 119
BsiHKAI GWGCWC 1 cut(s) 126
BsiSI CCGG 1 cut(s) 148
BsnI GGCC 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 126
BspACI CCGC 3 cut(s) 84, 95, 110
BspANI GGCC 1 cut(s) 119
BspFNI CGCG 1 cut(s) 134
BssECI CCNNGG 1 cut(s) 127
Bst6I CTCTTC 2 cut(s) 24, 57
BstAPI GCANNNNNTGC 1 cut(s) 81
BstC8I GCNNGC 1 cut(s) 23
BstDSI CCRYGG 1 cut(s) 127
BstFNI CGCG 1 cut(s) 134
BstHHI GCGC 1 cut(s) 134
BstMWI GCNNNNNNNGC 3 cut(s) 81, 116, 151
BstUI CGCG 1 cut(s) 134
BsuRI GGCC 1 cut(s) 119
BtgI CCRYGG 1 cut(s) 127
Cac8I GCNNGC 1 cut(s) 23
CfoI GCGC 1 cut(s) 134
CseI GACGC 1 cut(s) 123
CviJI RGCY 3 cut(s) 5, 25, 119
CviKI_1 RGCY 3 cut(s) 5, 25, 119
EaeI YGGCCR 1 cut(s) 117
Eam1104I CTCTTC 2 cut(s) 24, 57
EarI CTCTTC 2 cut(s) 24, 57
FaiI YATR 1 cut(s) 143
FauI CCCGC 1 cut(s) 77
GlaI GCGC 1 cut(s) 133
HaeIII GGCC 1 cut(s) 119
HapII CCGG 1 cut(s) 148
HgaI GACGC 1 cut(s) 123
HhaI GCGC 1 cut(s) 134
Hin6I GCGC 1 cut(s) 132
HinP1I GCGC 1 cut(s) 132
HincII GTYRAC 1 cut(s) 37
HindII GTYRAC 1 cut(s) 37
HpaII CCGG 1 cut(s) 148
Hpy166II GTNNAC 1 cut(s) 37
Hpy8I GTNNAC 1 cut(s) 37
Hpy99I CGWCG 2 cut(s) 53, 139
HpyAV CCTTC 2 cut(s) 24, 49
HpyCH4V TGCA 1 cut(s) 21
HpyF10VI GCNNNNNNNGC 3 cut(s) 81, 116, 151
HspAI GCGC 1 cut(s) 132
LmnI GCTCC 2 cut(s) 129, 150
LpnPI CCDG 2 cut(s) 31, 161
MboII GAAGA 2 cut(s) 41, 74
MhlI GDGCHC 1 cut(s) 126
MluCI AATT 1 cut(s) 160
MnlI CCTC 6 cut(s) 25, 58, 81, 91, 96, 100
MspI CCGG 1 cut(s) 148
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 3 cut(s) 81, 116, 151
PcsI WCGNNNNNNNCGW 2 cut(s) 48, 57
SduI GDGCHC 1 cut(s) 126
SetI ASST 3 cut(s) 27, 36, 69
Sse9I AATT 1 cut(s) 160
SsiI CCGC 3 cut(s) 84, 95, 110
TaqI TCGA 3 cut(s) 27, 42, 137
TasI AATT 1 cut(s) 160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.