Belongs to the SNF7 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10640 AT3G10640 AT5G04850 AT5G04850 |
| fragaria_vesca | FvH4_7g05380 FvH4_7g05380 FvH4_7g05380 |
| malus_domestica | MD08G1216900.v1.1 MD15G1404000.v1.1 |
| prunus_persica | Prupe.1G550400_v2.0.a1 Prupe.1G550400_v2.0.a1 |
| pyrus_communis | pycom08g18770 |
| rosa_chinensis | RchiOBHm_Chr1g0331931 RchiOBHm_Chr3g0460771 |
| rosa_laevigata | RLG00000011629 RLG00000029704 |
| rosa_multiflora | Rmu_sc0005900.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00318620 Rroxscaffold_5G00351550 Rroxscaffold_7G00170840 Rroxscaffold_7G00196350 |
| rosa_rugosa | Rorug01G0096900 Rorug03G0295000 Rorug04G0106500.1 |
| rosa_samantha | Rh1AG121000 Rh1BG092500 Rh1DG126900 Rh3AG332900 Rh4AG218900 Rh4CG171000 Rh4CG304700 Rh5AG357900 Rh5AG363800 Rh5BG477400 Rh6CG424100 Rh7AG204300 |
| rosa_wichuraiana | Rw1G009870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 182 |
| AgsI | TTSAA | 1 cut(s) | 59 |
| AluBI | AGCT | 2 cut(s) | 49, 116 |
| AluI | AGCT | 2 cut(s) | 49, 116 |
| AoxI | GGCC | 1 cut(s) | 95 |
| ApeKI | GCWGC | 1 cut(s) | 104 |
| AseI | ATTAAT | 1 cut(s) | 9 |
| BbsI | GAAGAC | 2 cut(s) | 95, 192 |
| BbvI | GCAGC | 1 cut(s) | 91 |
| BisI | GCNGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 106 |
| BpiI | GAAGAC | 2 cut(s) | 95, 192 |
| BpuEI | CTTGAG | 1 cut(s) | 128 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseMII | CTCAG | 1 cut(s) | 192 |
| BseXI | GCAGC | 1 cut(s) | 91 |
| BsgI | GTGCAG | 1 cut(s) | 90 |
| BshFI | GGCC | 1 cut(s) | 97 |
| BsnI | GGCC | 1 cut(s) | 97 |
| Bsp143I | GATC | 1 cut(s) | 39 |
| BspACI | CCGC | 1 cut(s) | 182 |
| BspANI | GGCC | 1 cut(s) | 97 |
| BspCNI | CTCAG | 1 cut(s) | 191 |
| BssMI | GATC | 1 cut(s) | 39 |
| Bst4CI | ACNGT | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 178 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstKTI | GATC | 1 cut(s) | 42 |
| BstMBI | GATC | 1 cut(s) | 39 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 113, 122 |
| BstV1I | GCAGC | 1 cut(s) | 91 |
| BstV2I | GAAGAC | 2 cut(s) | 95, 192 |
| BsuRI | GGCC | 1 cut(s) | 97 |
| BtgZI | GCGATG | 1 cut(s) | 146 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| BtsIMutI | CAGTG | 1 cut(s) | 33 |
| CseI | GACGC | 1 cut(s) | 110 |
| CviAII | CATG | 1 cut(s) | 110 |
| CviJI | RGCY | 3 cut(s) | 49, 97, 116 |
| CviKI_1 | RGCY | 3 cut(s) | 49, 97, 116 |
| DdeI | CTNAG | 1 cut(s) | 178 |
| DpnI | GATC | 1 cut(s) | 41 |
| DpnII | GATC | 1 cut(s) | 39 |
| Eco147I | AGGCCT | 1 cut(s) | 97 |
| FaeI | CATG | 1 cut(s) | 113 |
| FaiI | YATR | 2 cut(s) | 81, 111 |
| FatI | CATG | 1 cut(s) | 109 |
| Fnu4HI | GCNGC | 1 cut(s) | 105 |
| FokI | GGATG | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 1 cut(s) | 105 |
| FspEI | CC | 9 cut(s) | 3, 14, 79, 107, 111, 121, 122, 156, 167 |
| GluI | GCNGC | 1 cut(s) | 105 |
| HaeIII | GGCC | 1 cut(s) | 97 |
| HgaI | GACGC | 1 cut(s) | 110 |
| Hin1II | CATG | 1 cut(s) | 113 |
| HindIII | AAGCTT | 1 cut(s) | 47 |
| HinfI | GANTC | 1 cut(s) | 185 |
| Hpy188III | TCNNGA | 2 cut(s) | 43, 85 |
| HpyCH4III | ACNGT | 1 cut(s) | 28 |
| HpyCH4V | TGCA | 2 cut(s) | 107, 161 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 113, 122 |
| HpyF3I | CTNAG | 1 cut(s) | 178 |
| Hsp92II | CATG | 1 cut(s) | 113 |
| Kzo9I | GATC | 1 cut(s) | 39 |
| LpnPI | CCDG | 1 cut(s) | 111 |
| Lsp1109I | GCAGC | 1 cut(s) | 91 |
| MalI | GATC | 1 cut(s) | 41 |
| MboI | GATC | 1 cut(s) | 39 |
| MboII | GAAGA | 3 cut(s) | 49, 100, 192 |
| MluCI | AATT | 1 cut(s) | 156 |
| MlyI | GAGTC | 1 cut(s) | 194 |
| MnlI | CCTC | 2 cut(s) | 11, 129 |
| MseI | TTAA | 2 cut(s) | 9, 63 |
| MspA1I | CMGCKG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 113, 122 |
| NdeII | GATC | 1 cut(s) | 39 |
| NlaIII | CATG | 1 cut(s) | 113 |
| PceI | AGGCCT | 1 cut(s) | 97 |
| PkrI | GCNGC | 1 cut(s) | 106 |
| PleI | GAGTC | 1 cut(s) | 193 |
| PpsI | GAGTC | 1 cut(s) | 193 |
| PshBI | ATTAAT | 1 cut(s) | 9 |
| SaqAI | TTAA | 2 cut(s) | 9, 63 |
| SatI | GCNGC | 1 cut(s) | 105 |
| Sau3AI | GATC | 1 cut(s) | 39 |
| SchI | GAGTC | 1 cut(s) | 194 |
| SetI | ASST | 2 cut(s) | 51, 118 |
| SgeI | CNNG | 9 cut(s) | 55, 62, 97, 105, 110, 122, 138, 157, 174 |
| SmlI | CTYRAG | 1 cut(s) | 143 |
| SmoI | CTYRAG | 1 cut(s) | 143 |
| Sse9I | AATT | 1 cut(s) | 156 |
| SseBI | AGGCCT | 1 cut(s) | 97 |
| SsiI | CCGC | 1 cut(s) | 182 |
| StuI | AGGCCT | 1 cut(s) | 97 |
| TaaI | ACNGT | 1 cut(s) | 28 |
| TasI | AATT | 1 cut(s) | 156 |
| Tru1I | TTAA | 2 cut(s) | 9, 63 |
| Tru9I | TTAA | 2 cut(s) | 9, 63 |
| TscAI | CASTG | 1 cut(s) | 33 |
| TseI | GCWGC | 1 cut(s) | 104 |
| TspDTI | ATGAA | 3 cut(s) | 17, 126, 206 |
| TspRI | CASTG | 1 cut(s) | 33 |
| VspI | ATTAAT | 1 cut(s) | 9 |