Belongs to the SNF7 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10640 AT3G10640 AT5G04850 AT5G04850 |
| fragaria_vesca | FvH4_7g05380 FvH4_7g05380 FvH4_7g05380 |
| malus_domestica | MD08G1216900.v1.1 MD15G1404000.v1.1 |
| prunus_persica | Prupe.1G550400_v2.0.a1 Prupe.1G550400_v2.0.a1 |
| pyrus_communis | pycom08g18770 |
| rosa_chinensis | RchiOBHm_Chr1g0331931 RchiOBHm_Chr3g0460771 |
| rosa_laevigata | RLG00000011629 RLG00000029704 |
| rosa_multiflora | Rmu_sc0005900.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00318620 Rroxscaffold_5G00351550 Rroxscaffold_7G00170840 Rroxscaffold_7G00196350 |
| rosa_rugosa | Rorug01G0096900 Rorug03G0295000 Rorug04G0106500.1 |
| rosa_samantha | Rh1AG121000 Rh1BG092500 Rh1DG126900 Rh3AG332900 Rh4AG218900 Rh4CG171000 Rh4CG304700 Rh5AG357900 Rh5AG363800 Rh5BG477400 Rh6CG424100 Rh7AG204300 |
| rosa_wichuraiana | Rw1G009870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 5 cut(s) | 68, 335, 361, 373, 389 |
| AluBI | AGCT | 4 cut(s) | 58, 108, 268, 325 |
| AluI | AGCT | 4 cut(s) | 58, 108, 268, 325 |
| Alw21I | GWGCWC | 2 cut(s) | 290, 356 |
| Alw26I | GTCTC | 3 cut(s) | 225, 350, 398 |
| Alw44I | GTGCAC | 2 cut(s) | 286, 352 |
| AoxI | GGCC | 1 cut(s) | 305 |
| ApaLI | GTGCAC | 2 cut(s) | 286, 352 |
| ApeKI | GCWGC | 1 cut(s) | 276 |
| AseI | ATTAAT | 1 cut(s) | 338 |
| BaeGI | GKGCMC | 2 cut(s) | 290, 356 |
| BbsI | GAAGAC | 1 cut(s) | 104 |
| Bbv12I | GWGCWC | 2 cut(s) | 290, 356 |
| BbvI | GCAGC | 1 cut(s) | 288 |
| BccI | CCATC | 1 cut(s) | 180 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 214, 248 |
| BcoDI | GTCTC | 3 cut(s) | 225, 350, 398 |
| BisI | GCNGC | 1 cut(s) | 277 |
| BlsI | GCNGC | 1 cut(s) | 278 |
| BmsI | GCATC | 1 cut(s) | 237 |
| BpiI | GAAGAC | 1 cut(s) | 104 |
| BpmI | CTGGAG | 1 cut(s) | 272 |
| BpuEI | CTTGAG | 2 cut(s) | 263, 332 |
| BsaJI | CCNNGG | 1 cut(s) | 271 |
| BseDI | CCNNGG | 1 cut(s) | 271 |
| BseGI | GGATG | 2 cut(s) | 46, 211 |
| BseMII | CTCAG | 1 cut(s) | 181 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| BseSI | GKGCMC | 2 cut(s) | 290, 356 |
| BseXI | GCAGC | 1 cut(s) | 288 |
| BshFI | GGCC | 1 cut(s) | 307 |
| BsiHKAI | GWGCWC | 2 cut(s) | 290, 356 |
| BsmAI | GTCTC | 3 cut(s) | 225, 350, 398 |
| BsnI | GGCC | 1 cut(s) | 307 |
| Bsp1286I | GDGCHC | 2 cut(s) | 290, 356 |
| Bsp143I | GATC | 3 cut(s) | 48, 159, 225 |
| BspANI | GGCC | 1 cut(s) | 307 |
| BspCNI | CTCAG | 1 cut(s) | 180 |
| BssECI | CCNNGG | 1 cut(s) | 271 |
| BssMI | GATC | 3 cut(s) | 48, 159, 225 |
| BssT1I | CCWWGG | 1 cut(s) | 271 |
| Bst4CI | ACNGT | 1 cut(s) | 37 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 121 |
| BstC8I | GCNNGC | 1 cut(s) | 323 |
| BstDEI | CTNAG | 1 cut(s) | 167 |
| BstF5I | GGATG | 2 cut(s) | 46, 211 |
| BstKTI | GATC | 3 cut(s) | 51, 162, 228 |
| BstMAI | GTCTC | 3 cut(s) | 225, 350, 398 |
| BstMBI | GATC | 3 cut(s) | 48, 159, 225 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 121, 285 |
| BstNSI | RCATGY | 1 cut(s) | 92 |
| BstSLI | GKGCMC | 2 cut(s) | 290, 356 |
| BstV1I | GCAGC | 1 cut(s) | 288 |
| BstV2I | GAAGAC | 1 cut(s) | 104 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 132 |
| BsuRI | GGCC | 1 cut(s) | 307 |
| BtsCI | GGATG | 2 cut(s) | 46, 211 |
| BtsIMutI | CAGTG | 2 cut(s) | 42, 288 |
| Cac8I | GCNNGC | 1 cut(s) | 323 |
| CviAII | CATG | 2 cut(s) | 5, 89 |
| CviJI | RGCY | 6 cut(s) | 58, 108, 171, 268, 307, 325 |
| CviKI_1 | RGCY | 6 cut(s) | 58, 108, 171, 268, 307, 325 |
| DdeI | CTNAG | 1 cut(s) | 167 |
| DpnI | GATC | 3 cut(s) | 50, 161, 227 |
| DpnII | GATC | 3 cut(s) | 48, 159, 225 |
| Eco130I | CCWWGG | 1 cut(s) | 271 |
| EcoT14I | CCWWGG | 1 cut(s) | 271 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 271 |
| FaeI | CATG | 2 cut(s) | 8, 92 |
| FaiI | YATR | 4 cut(s) | 6, 26, 90, 233 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 341, 373 |
| FatI | CATG | 2 cut(s) | 4, 88 |
| Fnu4HI | GCNGC | 1 cut(s) | 277 |
| FokI | GGATG | 2 cut(s) | 53, 218 |
| Fsp4HI | GCNGC | 1 cut(s) | 277 |
| GluI | GCNGC | 1 cut(s) | 277 |
| GsuI | CTGGAG | 1 cut(s) | 272 |
| HaeIII | GGCC | 1 cut(s) | 307 |
| Hin1II | CATG | 2 cut(s) | 8, 92 |
| HindIII | AAGCTT | 1 cut(s) | 56 |
| HinfI | GANTC | 1 cut(s) | 141 |
| Hpy166II | GTNNAC | 2 cut(s) | 288, 354 |
| Hpy188I | TCNGA | 1 cut(s) | 225 |
| Hpy188III | TCNNGA | 2 cut(s) | 52, 94 |
| Hpy8I | GTNNAC | 2 cut(s) | 288, 354 |
| HpyAV | CCTTC | 3 cut(s) | 250, 367, 394 |
| HpyCH4III | ACNGT | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 235, 288, 354 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 121, 285 |
| HpyF3I | CTNAG | 1 cut(s) | 167 |
| Hsp92II | CATG | 2 cut(s) | 8, 92 |
| Kzo9I | GATC | 3 cut(s) | 48, 159, 225 |
| LmnI | GCTCC | 4 cut(s) | 105, 136, 273, 299 |
| LpnPI | CCDG | 2 cut(s) | 236, 325 |
| Lsp1109I | GCAGC | 1 cut(s) | 288 |
| LweI | GCATC | 1 cut(s) | 237 |
| MaeIII | GTNAC | 1 cut(s) | 150 |
| MalI | GATC | 3 cut(s) | 50, 161, 227 |
| MboI | GATC | 3 cut(s) | 48, 159, 225 |
| MboII | GAAGA | 3 cut(s) | 58, 109, 169 |
| MhlI | GDGCHC | 2 cut(s) | 290, 356 |
| MluCI | AATT | 2 cut(s) | 335, 384 |
| MlyI | GAGTC | 1 cut(s) | 135 |
| MnlI | CCTC | 1 cut(s) | 253 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 72, 338 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 121, 285 |
| NdeII | GATC | 3 cut(s) | 48, 159, 225 |
| NlaIII | CATG | 2 cut(s) | 8, 92 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 92 |
| PkrI | GCNGC | 1 cut(s) | 278 |
| PleI | GAGTC | 1 cut(s) | 135 |
| PpsI | GAGTC | 1 cut(s) | 135 |
| PshBI | ATTAAT | 1 cut(s) | 338 |
| SaqAI | TTAA | 2 cut(s) | 72, 338 |
| SatI | GCNGC | 1 cut(s) | 277 |
| Sau3AI | GATC | 3 cut(s) | 48, 159, 225 |
| SchI | GAGTC | 1 cut(s) | 135 |
| SduI | GDGCHC | 2 cut(s) | 290, 356 |
| SetI | ASST | 5 cut(s) | 60, 110, 270, 327, 359 |
| SfaNI | GCATC | 1 cut(s) | 237 |
| SmlI | CTYRAG | 2 cut(s) | 242, 347 |
| SmoI | CTYRAG | 2 cut(s) | 242, 347 |
| Sse9I | AATT | 2 cut(s) | 335, 384 |
| StyI | CCWWGG | 1 cut(s) | 271 |
| TaaI | ACNGT | 1 cut(s) | 37 |
| TasI | AATT | 2 cut(s) | 335, 384 |
| Tru1I | TTAA | 2 cut(s) | 72, 338 |
| Tru9I | TTAA | 2 cut(s) | 72, 338 |
| TscAI | CASTG | 2 cut(s) | 42, 295 |
| TseI | GCWGC | 1 cut(s) | 276 |
| TspDTI | ATGAA | 1 cut(s) | 222 |
| TspRI | CASTG | 2 cut(s) | 42, 295 |
| VneI | GTGCAC | 2 cut(s) | 286, 352 |
| VspI | ATTAAT | 1 cut(s) | 338 |
| XceI | RCATGY | 1 cut(s) | 92 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |