Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003773

Physical Location & Seq

Genomic Coordinates Forward (+)

1350080 .. 1355466

Gene Structure 5387 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G04810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3006 bp

ATGGCCGCCGCCATGGTTAGTTCCGCCGGTGGGTTACTGGCAATGCTCAACGAACCCCATCCTTCCTTGAAACTTCACGCTCTCTCATATCTCATCAGATTGGTTGACCAATTTTGGCCCGAGATCTCCACTAGTGTCCCAATCATAGAGAGCTTATACGAAGATGAAGAGTTTGATCAGCATCAAAGACAGCTTGCTGCCTTGTTGGCCTCCAAGGTTTTCTATTACTTGGGTGAGCTTAACGATTCCTTGTCCTATGCCCTTGGAGCTGGATCCTTGTTTGATGTGTCAGAGGATTCTGATTATATTCATACTCTTCTATCCAAAGCAATAGATGAGTATGCTATTCTCAGATCAAAGGCAGTCGAGTCAAGTGAGGTGGTGGAAATTGACCCGAGATTGGTGGCCATTGTTGAACGAATGCTAGACAAATGTATCACTGACGGAAAGTATCAACAAGCCATGGGCATTGCTATAGAATGCCGGAGATTGGATAAGTTGGAGGAAGCGATCATAAAGAGTGAGAATGTGCAGGGAACATTATCTTACTGCATCAATGTTTCCCACTCTTTTGTTAATCAAAGAGAATATAGACATGAGGTTCTTCGGTTACTTGTTAATGTTTACCAGAAGCTGGCTTCTCCTGATTATTTGAGCATTTGCCAATGCCTTATGTTCTTGGATGAACCACAAGGCGTTGCAAGCATATTGGAGAAGCTTCTTCGTTCAGAGAACAAAGATGATGCTTTATTGGCTTTCCAAATCTCTTTCGATCTTGTACAGAATGAGCACCAGGCATTCCTCATGAGTGTTAGAGATCGCCTTCCAGCGCCCAAGACCCGTCCTGTAGAAGCAATTCAAGCTGTTGAAACCTCTACTGCTCAGAATGAGAACACTGCAGGGGATGTTCAGATGGCGGATGAAACTCCATCTCAGACAATTGTGCATGAAACAGATCCTGTTGACGCTGTGTACGCTGAGAGGTTAACAAAGGCTAAGGGGATTTTATCTGGAGAGACATCAATACAACTGACACTCCAGTTTCTTTACAGCCATAACAAATCGGACCTGCTGATCCTGAAGACAATCAAACAATCTGTTGAGATGCGGAACAGTGTATGTCACAGTGCTACAATTTATGCTAATGCTATAATGCATGCTGGAACGACAGTTGACACTTTTCTCAGGGAGAATTTGGATTGGCTAAGCAGGGCCACCAATTGGGCCAAGTTTAGTGCTACAGCAGGATTAGGTGTTATTCATAGGGGTCACTTGCAACAGGGCAGGTCACTGATGGCCCCATACTTGCCTCAGGGCGGAGCAGGTGGTGGCGGGAGTCCTTATTCCGAAGGGGGTGCTTTATATGCTCTCGGCCTTATTCATGCAAACCATGGTGAGGGAATCAAGCAATTTCTTCGTGATAGTCTACGCAGCACTAGTGTTGAGGTTATTCAACACGGAGCTTGTTTAGGTCTTGGTTTGGCTGCTCTTGGGACAGCTGATGAAGACATATATGATGATATCAAAAGTGTGCTTTACACTGACAGTGCTGTTGCTGGTGAAGCTGCCGGCATAAGCATGGGTCTATTGTTGGTTGGAACAGCAACTGATAAGGCAAGTGAGATGCTCGCTTATGCTCACGAGACTCAGCATGAGAAGATAATAAGGGGATTGGCTCTAGGAATAGCTCTCACAGTATATGGAAGAGAAGAGGGAGCAGATACTTTGATTGAGCAGATGACTAGAGATCAGGATCCTATCATCCGTTATGGTGGAATGTATGCACTCGCATTGGCTTACAGTGGAACTGCAAACAACAAAGCCATCCGCCAACTTCTTCACTTTGCTGTGTCTGATGTCAGTGACGATGTTAGGAGGACTGCTGTTCTTGCACTTGGATTTGTCTTATACTCTGATCCAGAGCAGACTCCCCGTATTGTATCCCTTCTTTCCGAGTCGTACAATCCACATGTCCGCTATGGCGCAGCTCTTGCAGTTGGCATCTCTTGTGCAGGCACTGGTCTGAGTGAGGCGATATCTTTGTTGGAGCCACTTACATCAGATGTTGTAGACTTTGTTCGTCAAGGTGCTCTGATTGCCATGGCCATGGTGATGGTCCAAATTAGTGAAGCAAGCGATTCTCGCGTTGGAGCATTTAGGCGTCAACTTGAGAAGATAATACTTGACAAGCATGAAGATACAATGAGCAAGATGGGAGCAATTTTGGCTTCAGGTATTCTTGATGCTGGTGGAAGGAATGTGACGATAAGACTGCTGTCTAAGACAAAACATGACAAAGTCACTGCAGTCATTGGCCTTACTGTCTTCAGCCAGTTTTGGTATTGGTACCCATTGATTTACTTCATAAGCTTGGCGTTTTCACCCACCGCCTTCATCGGTTTGAACTACGATCTCAAAGTCCCAAAGTTTGAATTCATGTCACACGCAAAACCATCGTTGTTTGAGTATCCAAAACCAACTACGGTTGCTACTGCCAACACCGCTGCCAAATTACCAACTGCTGTGCTCTCAACCTCAGCCAAAGCCAAAGCTAAGGCTAAGAAAGAAGCAGAGCAGAAAGCTAAAGCTGAAAACTCTGGCAATGAAGCTGGAAAAGCCAATGCAGCGTCAGATGAGAAGGAAGCAGAGTCTATGCAGGTTGATAGCACAGCTACAACGGTGGAGAAGAAGGTTGAGCCAGAAGCAACGTTTGAGATTCTAGTCAATCCTGCGCGTGTAGTCCCTTCACAGGAGAAATACATCAAATTGATGGAGGATAGCCGATATGTACCGATGAAGCTAGCTCCATCAGGGTTTGTCCTTCTCAGAGACTTGCGTCCGCATGAGCCTGAAGTTCTGTCTCTGACCGATGCACCGACTTCAACAGCATCCCCTGCAGTGGGTGCAGAAGCTGCAGGACAAGCCCAACAAGCAGCCACCACCTCTGCTATGGCCATAGATGACGAGCCACAACCTCCGCAGGCCTTTGAATACGCTTCTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005838 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008540 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0019538 GO:0019941 GO:0022624 GO:0030163 GO:0031597 GO:0032991 GO:0034515 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0051603 GO:0071704 GO:0071944 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

PC_rep

Protein Analysis

1001

Amino Acids

108.86

Weight (kDa)

5.19

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPN2_N	PF21505	8 - 353	4.1e-89	26S proteasome subunit RPN2, N-terminal domain
PC_rep	PF01851	487 - 520	3.3e-06	Proteasome/cyclosome repeat
HEAT_2	PF13646	610 - 702	8.6e-12	HEAT repeats
PC_rep	PF01851	661 - 694	2.8e-06	Proteasome/cyclosome repeat
RPN2_C	PF18004	796 - 952	1.9e-46	26S proteasome regulatory subunit RPN2 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003773)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04810 AT2G32730
fragaria_vesca	FvH4_4g00680
malus_domestica	MD04G1006300.v1.1 MD08G1218500.v1.1 MD08G1218600.v1.1 MD15G1407100.v1.1
prunus_persica	Prupe.1G006500_v2.0.a1 Prupe.1G006500_v2.0.a1 Prupe.1G554900_v2.0.a1
pyrus_communis	pycom04g00570 pycom08g18930 pycom15g36330
rosa_chinensis	RchiOBHm_Chr4g0386391 RchiOBHm_Chr6g0269091 RchiOBHm_Chr6g0269101 RchiOBHm_Chr6g0269111
rosa_laevigata	RLG00000010168 RLG00000013884
rosa_multiflora	Rmu_co8360047.1_g000001 Rmu_sc0000472.1_g000007 Rmu_sc0002413.1_g000010
rosa_roxburghii	Rroxscaffold_5G00333870
rosa_rugosa	Rorug03G0197200 Rorug03G0306500 Rorug06G0044800
rosa_samantha	Rh3BG283800 Rh4AG010900 Rh4BG008300 Rh4DG009100 Rh6CG164400 Rh6CG164500 Rh6DG156000
rosa_wichuraiana	Rw4G000090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1313
Acc36I	ACCTGC	4 cut(s)	1077, 1275, 1313, 2647
Acc65I	GGTACC	1 cut(s)	2346
AccB1I	GGYRCC	1 cut(s)	2346
AccB7I	CCANNNNNTGG	2 cut(s)	634, 1221
AccI	GTMKAC	2 cut(s)	1426, 2070
AccII	CGCG	2 cut(s)	2145, 2734
AclI	AACGTT	1 cut(s)	2708
AclWI	GGATC	7 cut(s)	267, 280, 950, 1069, 1748, 1761, 1910
AcoI	YGGCCR	4 cut(s)	3, 405, 2103, 2952
AcsI	RAATTY	2 cut(s)	1192, 2432
AcuI	CTGAAG	4 cut(s)	1100, 2214, 2311, 2871
AcyI	GRCGYC	1 cut(s)	2161
AfaI	GTAC	5 cut(s)	780, 974, 1961, 2348, 2790
AflIII	ACRYGT	1 cut(s)	1969
AgsI	TTSAA	9 cut(s)	70, 416, 860, 869, 1454, 2404, 2432, 2883, 2990
AhlI	ACTAGT	2 cut(s)	131, 1436
AjnI	CCWGG	1 cut(s)	792
Alw21I	GWGCWC	3 cut(s)	792, 2092, 2529
Alw26I	GTCTC	4 cut(s)	1010, 1637, 2823, 2865
AlwI	GGATC	7 cut(s)	267, 280, 950, 1069, 1748, 1761, 1910
AlwNI	CAGNNNCTG	5 cut(s)	634, 959, 1607, 2018, 2912
Ama87I	CYCGRG	2 cut(s)	119, 394
ApeKI	GCWGC	9 cut(s)	197, 1431, 1484, 1565, 1985, 2504, 2624, 2912, 2933
ApoI	RAATTY	2 cut(s)	1192, 2432
Asp700I	GAANNNNTTC	1 cut(s)	855
Asp718I	GGTACC	1 cut(s)	2346
AspLEI	GCGC	3 cut(s)	832, 1985, 2734
AspS9I	GGNCC	6 cut(s)	117, 1066, 1212, 1224, 1297, 2116
AsuHPI	GGTGA	5 cut(s)	245, 1406, 1571, 2122, 2373
AsuNHI	GCTAGC	1 cut(s)	2800
AvaI	CYCGRG	2 cut(s)	119, 394
AvaII	GGWCC	2 cut(s)	1066, 2116
AxyI	CCTNAGG	1 cut(s)	1311
BaeI	ACNNNNGTAYC	2 cut(s)	418, 451
BalI	TGGCCA	3 cut(s)	407, 2105, 2954
BamHI	GGATCC	2 cut(s)	272, 1753
BanI	GGYRCC	1 cut(s)	2346
BauI	CACGAG	1 cut(s)	1640
BbsI	GAAGAC	3 cut(s)	1088, 1512, 2317
Bbv12I	GWGCWC	3 cut(s)	792, 2092, 2529
BbvCI	CCTCAGC	1 cut(s)	2536
BbvI	GCAGC	9 cut(s)	184, 1443, 1471, 1552, 1997, 2491, 2636, 2899, 2945
BcgI	CGANNNNNNTGC	8 cut(s)	1337, 1371, 1397, 1431, 2254, 2288, 2436, 2470
BciT130I	CCWGG	1 cut(s)	794
BciVI	GTATCC	2 cut(s)	1951, 2478
BclI	TGATCA	1 cut(s)	175
BcoDI	GTCTC	4 cut(s)	1010, 1637, 2823, 2865
BcuI	ACTAGT	2 cut(s)	131, 1436
BfaI	CTAG	7 cut(s)	132, 425, 1437, 1679, 1743, 2720, 2801
BfmI	CTRYAG	7 cut(s)	474, 846, 897, 1239, 2304, 2895, 2913
BfoI	RGCGCY	1 cut(s)	833
BfuAI	ACCTGC	4 cut(s)	1077, 1275, 1313, 2647
BfuI	GTATCC	2 cut(s)	1951, 2478
BglI	GCCNNNNNGGC	1 cut(s)	206
BglII	AGATCT	1 cut(s)	123
BlpI	GCTNAGC	1 cut(s)	1205
Bme1390I	CCNGG	1 cut(s)	794
Bme18I	GGWCC	2 cut(s)	1066, 2116
BmeT110I	CYCGRG	2 cut(s)	119, 394
BmgT120I	GGNCC	6 cut(s)	117, 1066, 1212, 1224, 1297, 2116
BmiI	GGNNCC	5 cut(s)	274, 1299, 1755, 2049, 2348
BmrFI	CCNGG	1 cut(s)	794
BmsI	GCATC	9 cut(s)	190, 561, 733, 1095, 1614, 2010, 2233, 2860, 2897
BmtI	GCTAGC	1 cut(s)	2804
BoxI	GACNNNNGTC	2 cut(s)	2275, 2835
BpiI	GAAGAC	3 cut(s)	1088, 1512, 2317
BpmI	CTGGAG	2 cut(s)	1022, 1032
Bpu10I	CCTNAGC	3 cut(s)	996, 2536, 2553
Bpu1102I	GCTNAGC	1 cut(s)	1205
BpuEI	CTTGAG	1 cut(s)	2189
BsaBI	GATNNNNATC	2 cut(s)	180, 1752
BsaHI	GRCGYC	1 cut(s)	2161
BsaJI	CCNNGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
BsaXI	ACNNNNNCTCC	2 cut(s)	1020, 1050
Bse118I	RCCGGY	2 cut(s)	26, 1568
Bse1I	ACTGG	4 cut(s)	42, 1039, 2023, 2332
Bse21I	CCTNAGG	1 cut(s)	1311
Bse3DI	GCAATG	3 cut(s)	48, 468, 2608
Bse8I	GATNNNNATC	2 cut(s)	180, 1752
BseBI	CCWGG	1 cut(s)	794
BseDI	CCNNGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
BseGI	GGATG	7 cut(s)	58, 688, 910, 925, 1761, 1824, 2888
BseJI	GATNNNNATC	2 cut(s)	180, 1752
BseMI	GCAATG	3 cut(s)	48, 468, 2608
BseNI	ACTGG	4 cut(s)	42, 1039, 2023, 2332
BseXI	GCAGC	9 cut(s)	184, 1443, 1471, 1552, 1997, 2491, 2636, 2899, 2945
BsgI	GTGCAG	3 cut(s)	551, 2031, 2925
Bsh1236I	CGCG	2 cut(s)	2145, 2734
BshNI	GGYRCC	1 cut(s)	2346
BsiHKAI	GWGCWC	3 cut(s)	792, 2092, 2529
BsiHKCI	CYCGRG	2 cut(s)	119, 394
BsiSI	CCGG	3 cut(s)	27, 484, 1569
BslFI	GGGAC	4 cut(s)	122, 1507, 2405, 2726
BsmAI	GTCTC	4 cut(s)	1010, 1637, 2823, 2865
BsmFI	GGGAC	4 cut(s)	122, 1507, 2405, 2726
BsmI	GAATGC	3 cut(s)	426, 485, 797
BsoBI	CYCGRG	2 cut(s)	119, 394
Bsp1286I	GDGCHC	3 cut(s)	792, 2092, 2529
Bsp1407I	TGTACA	1 cut(s)	778
Bsp1720I	GCTNAGC	1 cut(s)	1205
Bsp19I	CCATGG	5 cut(s)	12, 462, 1390, 2100, 2106
BspFNI	CGCG	2 cut(s)	2145, 2734
BspHI	TCATGA	1 cut(s)	804
BspLI	GGNNCC	5 cut(s)	274, 1299, 1755, 2049, 2348
BspMAI	CTGCAG	4 cut(s)	901, 2308, 2899, 2917
BspMI	ACCTGC	4 cut(s)	1077, 1275, 1313, 2647
BspOI	GCTAGC	1 cut(s)	2804
BspPI	GGATC	7 cut(s)	267, 280, 950, 1069, 1748, 1761, 1910
BspT107I	GGYRCC	1 cut(s)	2346
BsrDI	GCAATG	3 cut(s)	48, 468, 2608
BsrFI	RCCGGY	2 cut(s)	26, 1568
BsrGI	TGTACA	1 cut(s)	778
BsrI	ACTGG	4 cut(s)	42, 1039, 2023, 2332
BssAI	RCCGGY	2 cut(s)	26, 1568
BssECI	CCNNGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
BssNI	GRCGYC	1 cut(s)	2161
BssSI	CACGAG	1 cut(s)	1640
BssT1I	CCWWGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
Bst2BI	CACGAG	1 cut(s)	1640
Bst2UI	CCWGG	1 cut(s)	794
Bst4CI	ACNGT	9 cut(s)	1115, 1127, 1171, 1547, 1696, 1802, 2323, 2485, 2680
Bst6I	CTCTTC	4 cut(s)	162, 321, 1699, 1704
BstACI	GRCGYC	1 cut(s)	2161
BstAPI	GCANNNNNTGC	4 cut(s)	1991, 2894, 2903, 2912
BstAUI	TGTACA	1 cut(s)	778
BstDSI	CCRYGG	5 cut(s)	12, 462, 1390, 2100, 2106
BstF5I	GGATG	7 cut(s)	58, 688, 910, 925, 1761, 1824, 2888
BstFNI	CGCG	2 cut(s)	2145, 2734
BstH2I	RGCGCY	1 cut(s)	833
BstHHI	GCGC	3 cut(s)	832, 1985, 2734
BstMAI	GTCTC	4 cut(s)	1010, 1637, 2823, 2865
BstNI	CCWGG	1 cut(s)	794
BstNSI	RCATGY	2 cut(s)	1160, 1973
BstPAI	GACNNNNGTC	2 cut(s)	2275, 2835
BstSCI	CCNGG	1 cut(s)	792
BstSFI	CTRYAG	7 cut(s)	474, 846, 897, 1239, 2304, 2895, 2913
BstUI	CGCG	2 cut(s)	2145, 2734
BstV1I	GCAGC	9 cut(s)	184, 1443, 1471, 1552, 1997, 2491, 2636, 2899, 2945
BstV2I	GAAGAC	3 cut(s)	1088, 1512, 2317
BstX2I	RGATCY	4 cut(s)	123, 272, 955, 1753
BstXI	CCANNNNNNTGG	2 cut(s)	2107, 2113
BstYI	RGATCY	4 cut(s)	123, 272, 955, 1753
Bsu36I	CCTNAGG	1 cut(s)	1311
BsuI	GTATCC	2 cut(s)	1951, 2478
BtgI	CCRYGG	5 cut(s)	12, 462, 1390, 2100, 2106
BtsCI	GGATG	7 cut(s)	58, 688, 910, 925, 1761, 1824, 2888
BtsI	GCAGTG	3 cut(s)	894, 2301, 2904
BveI	ACCTGC	4 cut(s)	1077, 1275, 1313, 2647
CaiI	CAGNNNCTG	5 cut(s)	634, 959, 1607, 2018, 2912
CciI	TCATGA	1 cut(s)	804
CfoI	GCGC	3 cut(s)	832, 1985, 2734
Cfr10I	RCCGGY	2 cut(s)	26, 1568
Cfr13I	GGNCC	6 cut(s)	117, 1066, 1212, 1224, 1297, 2116
CseI	GACGC	4 cut(s)	974, 2150, 2616, 2825
Csp6I	GTAC	5 cut(s)	779, 973, 1960, 2347, 2789
CspCI	CAANNNNNGTGG	2 cut(s)	360, 395
CviQI	GTAC	5 cut(s)	779, 973, 1960, 2347, 2789
EaeI	YGGCCR	4 cut(s)	3, 405, 2103, 2952
Eam1104I	CTCTTC	4 cut(s)	162, 321, 1699, 1704
EarI	CTCTTC	4 cut(s)	162, 321, 1699, 1704
EciI	GGCGGA	4 cut(s)	13, 932, 1332, 1817
Eco130I	CCWWGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
Eco147I	AGGCCT	1 cut(s)	2984
Eco32I	GATATC	2 cut(s)	1522, 2037
Eco47I	GGWCC	2 cut(s)	1066, 2116
Eco57I	CTGAAG	4 cut(s)	1100, 2214, 2311, 2871
Eco81I	CCTNAGG	1 cut(s)	1311
Eco88I	CYCGRG	2 cut(s)	119, 394
EcoRI	GAATTC	1 cut(s)	2432
EcoRII	CCWGG	1 cut(s)	792
EcoRV	GATATC	2 cut(s)	1522, 2037
EcoT14I	CCWWGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
EcoT22I	ATGCAT	1 cut(s)	1158
ErhI	CCWWGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
FaqI	GGGAC	4 cut(s)	122, 1507, 2405, 2726
FauI	CCCGC	1 cut(s)	1325
FbaI	TGATCA	1 cut(s)	175
FblI	GTMKAC	2 cut(s)	1426, 2070
FokI	GGATG	7 cut(s)	45, 695, 917, 932, 1748, 1811, 2875
FspBI	CTAG	7 cut(s)	132, 425, 1437, 1679, 1743, 2720, 2801
GlaI	GCGC	3 cut(s)	831, 1984, 2733
GsuI	CTGGAG	2 cut(s)	1022, 1032
HaeII	RGCGCY	1 cut(s)	833
HapII	CCGG	3 cut(s)	27, 484, 1569
HgaI	GACGC	4 cut(s)	974, 2150, 2616, 2825
HhaI	GCGC	3 cut(s)	832, 1985, 2734
Hin1I	GRCGYC	1 cut(s)	2161
Hin6I	GCGC	3 cut(s)	830, 1983, 2732
HinP1I	GCGC	3 cut(s)	830, 1983, 2732
HincII	GTYRAC	5 cut(s)	106, 964, 987, 1174, 2165
HindII	GTYRAC	5 cut(s)	106, 964, 987, 1174, 2165
HindIII	AAGCTT	2 cut(s)	716, 2368
HpaI	GTTAAC	1 cut(s)	987
HpaII	CCGG	3 cut(s)	27, 484, 1569
HphI	GGTGA	5 cut(s)	245, 1406, 1571, 2122, 2373
Hpy166II	GTNNAC	9 cut(s)	106, 625, 964, 973, 987, 1174, 1427, 2071, 2165
Hpy188III	TCNNGA	9 cut(s)	644, 805, 1011, 1078, 1418, 1640, 1751, 1919, 2240
Hpy8I	GTNNAC	9 cut(s)	106, 625, 964, 973, 987, 1174, 1427, 2071, 2165
HpyCH4III	ACNGT	9 cut(s)	1115, 1127, 1171, 1547, 1696, 1802, 2323, 2485, 2680
HpyCH4IV	ACGT	1 cut(s)	2708
HpySE526I	ACGT	1 cut(s)	2708
Hsp92I	GRCGYC	1 cut(s)	2161
HspAI	GCGC	3 cut(s)	830, 1983, 2732
KpnI	GGTACC	1 cut(s)	2350
KroI	GCCGGC	1 cut(s)	1568
KroNI	GCCGGC	1 cut(s)	1570
Ksp22I	TGATCA	1 cut(s)	175
KspAI	GTTAAC	1 cut(s)	987
LmnI	GCTCC	8 cut(s)	266, 1319, 1460, 1715, 2047, 2150, 2216, 2809
Lsp1109I	GCAGC	9 cut(s)	184, 1443, 1471, 1552, 1997, 2491, 2636, 2899, 2945
LweI	GCATC	9 cut(s)	190, 561, 733, 1095, 1614, 2010, 2233, 2860, 2897
MaeI	CTAG	7 cut(s)	132, 425, 1437, 1679, 1743, 2720, 2801
MaeII	ACGT	1 cut(s)	2708
MaeIII	GTNAC	9 cut(s)	33, 609, 1121, 1268, 1287, 1862, 2260, 2299, 2439
MfeI	CAATTG	2 cut(s)	939, 1219
MflI	RGATCY	4 cut(s)	123, 272, 955, 1753
MhlI	GDGCHC	3 cut(s)	792, 2092, 2529
MlsI	TGGCCA	3 cut(s)	407, 2105, 2954
MluNI	TGGCCA	3 cut(s)	407, 2105, 2954
MlyI	GAGTC	6 cut(s)	377, 1345, 1639, 1921, 1964, 2657
MmeI	TCCRAC	4 cut(s)	480, 1576, 2025, 2128
Mox20I	TGGCCA	3 cut(s)	407, 2105, 2954
Mph1103I	ATGCAT	1 cut(s)	1158
MroNI	GCCGGC	1 cut(s)	1568
MroXI	GAANNNNTTC	1 cut(s)	855
MscI	TGGCCA	3 cut(s)	407, 2105, 2954
MseI	TTAA	4 cut(s)	240, 576, 618, 986
MslI	CAYNNNNRTG	3 cut(s)	1577, 2105, 2111
Msp20I	TGGCCA	3 cut(s)	407, 2105, 2954
MspA1I	CMGCKG	2 cut(s)	1499, 2504
MspI	CCGG	3 cut(s)	27, 484, 1569
MspR9I	CCNGG	1 cut(s)	794
MunI	CAATTG	2 cut(s)	939, 1219
Mva1269I	GAATGC	3 cut(s)	426, 485, 797
MvaI	CCWGG	1 cut(s)	794
MvnI	CGCG	2 cut(s)	2145, 2734
NaeI	GCCGGC	1 cut(s)	1570
NcoI	CCATGG	5 cut(s)	12, 462, 1390, 2100, 2106
NgoMIV	GCCGGC	1 cut(s)	1568
NheI	GCTAGC	1 cut(s)	2800
NlaIV	GGNNCC	5 cut(s)	274, 1299, 1755, 2049, 2348
NmeAIII	GCCGAG	1 cut(s)	1350
NmuCI	GTSAC	7 cut(s)	1121, 1268, 1287, 1862, 2260, 2299, 2439
NsiI	ATGCAT	1 cut(s)	1158
NspI	RCATGY	2 cut(s)	1160, 1973
PaeI	GCATGC	1 cut(s)	1160
PagI	TCATGA	1 cut(s)	804
PaqCI	CACCTGC	1 cut(s)	1313
PceI	AGGCCT	1 cut(s)	2984
PciI	ACATGT	1 cut(s)	1969
PctI	GAATGC	3 cut(s)	426, 485, 797
PdiI	GCCGGC	1 cut(s)	1570
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	5 cut(s)	245, 296, 1401, 2138, 2716
PflFI	GACNNNGTC	1 cut(s)	2297
PflMI	CCANNNNNTGG	2 cut(s)	634, 1221
PleI	GAGTC	6 cut(s)	376, 1344, 1639, 1921, 1963, 2656
PpsI	GAGTC	6 cut(s)	376, 1344, 1639, 1921, 1963, 2656
PscI	ACATGT	1 cut(s)	1969
PshAI	GACNNNNGTC	2 cut(s)	2275, 2835
Psp1406I	AACGTT	1 cut(s)	2708
Psp6I	CCWGG	1 cut(s)	792
PspGI	CCWGG	1 cut(s)	792
PspN4I	GGNNCC	5 cut(s)	274, 1299, 1755, 2049, 2348
PspPI	GGNCC	6 cut(s)	117, 1066, 1212, 1224, 1297, 2116
PsrI	GAACNNNNNNTAC	2 cut(s)	2061, 2093
PstI	CTGCAG	4 cut(s)	901, 2308, 2899, 2917
PstNI	CAGNNNCTG	5 cut(s)	634, 959, 1607, 2018, 2912
PsuI	RGATCY	4 cut(s)	123, 272, 955, 1753
PsyI	GACNNNGTC	1 cut(s)	2297
PvuII	CAGCTG	1 cut(s)	1499
RsaI	GTAC	5 cut(s)	780, 974, 1961, 2348, 2790
RsaNI	GTAC	5 cut(s)	779, 973, 1960, 2347, 2789
RseI	CAYNNNNRTG	3 cut(s)	1577, 2105, 2111
SaqAI	TTAA	4 cut(s)	240, 576, 618, 986
Sau96I	GGNCC	6 cut(s)	117, 1066, 1212, 1224, 1297, 2116
SchI	GAGTC	6 cut(s)	377, 1345, 1639, 1921, 1964, 2657
ScrFI	CCNGG	1 cut(s)	794
SduI	GDGCHC	3 cut(s)	792, 2092, 2529
SfaNI	GCATC	9 cut(s)	190, 561, 733, 1095, 1614, 2010, 2233, 2860, 2897
SfcI	CTRYAG	7 cut(s)	474, 846, 897, 1239, 2304, 2895, 2913
SgrAI	CRCCGGYG	1 cut(s)	26
SinI	GGWCC	2 cut(s)	1066, 2116
SmiMI	CAYNNNNRTG	3 cut(s)	1577, 2105, 2111
SmlI	CTYRAG	1 cut(s)	2168
SmoI	CTYRAG	1 cut(s)	2168
SpeI	ACTAGT	2 cut(s)	131, 1436
SphI	GCATGC	1 cut(s)	1160
SseBI	AGGCCT	1 cut(s)	2984
SspMI	CTAG	7 cut(s)	132, 425, 1437, 1679, 1743, 2720, 2801
StuI	AGGCCT	1 cut(s)	2984
StyD4I	CCNGG	1 cut(s)	792
StyI	CCWWGG	7 cut(s)	12, 213, 262, 462, 1390, 2100, 2106
TaaI	ACNGT	9 cut(s)	1115, 1127, 1171, 1547, 1696, 1802, 2323, 2485, 2680
TaiI	ACGT	1 cut(s)	2711
TaqI	TCGA	2 cut(s)	366, 771
TaqII	GACCGA	1 cut(s)	2882
TatI	WGTACW	1 cut(s)	778
TauI	GCSGC	2 cut(s)	8, 11
TfiI	GAWTC	5 cut(s)	245, 296, 1401, 2138, 2716
Tru1I	TTAA	4 cut(s)	240, 576, 618, 986
Tru9I	TTAA	4 cut(s)	240, 576, 618, 986
TseFI	GTSAC	7 cut(s)	1121, 1268, 1287, 1862, 2260, 2299, 2439
TseI	GCWGC	9 cut(s)	197, 1431, 1484, 1565, 1985, 2504, 2624, 2912, 2933
Tsp45I	GTSAC	7 cut(s)	1121, 1268, 1287, 1862, 2260, 2299, 2439
TspGWI	ACGGA	3 cut(s)	459, 1473, 1754
Tth111I	GACNNNGTC	1 cut(s)	2297
Van91I	CCANNNNNTGG	2 cut(s)	634, 1221
VpaK11BI	GGWCC	2 cut(s)	1066, 2116
XapI	RAATTY	2 cut(s)	1192, 2432
XceI	RCATGY	2 cut(s)	1160, 1973
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2947
XmiI	GTMKAC	2 cut(s)	1426, 2070
XmnI	GAANNNNTTC	1 cut(s)	855
XspI	CTAG	7 cut(s)	132, 425, 1437, 1679, 1743, 2720, 2801
Zsp2I	ATGCAT	1 cut(s)	1158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.